Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000788

Physical Location & Seq

Genomic Coordinates Forward (+)

59004222 .. 59006057

Gene Structure 1836 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG406400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGGCCGAAAGAGGAGGAGGCGGCGCCGCTGGCGAGCGTGGAGGCTTCGGCCGCGGATTCGGAGGCCGCGGACGCGGAGGCGACCGTGGTCGAGGCGGCAGGCGTCGCGGTGCTGGCCGCCGTGACGAGGAGGAGAAATGGGTCCCAGTGACCAAGCTCGGCCGTCTCGTCAAGGACGGCAAGATCTCATCTCTGGAGCAGATCTACCTCCACTCGCTCCCAATCAAGGAGCACCAGATCATCGACACTCTCTGCCCCGGCCTCAAGGACGAGGTCATGAAGATCATGCCCGTCCAGAAGCAGACCCGCGCCGGTCAGAGGACCCGCTTCAAGGCCTTCGTCGTCGTCGGCGACAGCAACGGCCACGTCGGACTCGGCGTCAAGTGCAGCAAGGAGGTCGCCACCGCTATCCGGGGAGCGATTATTCTCGCCAAGCTTTCTGTGATTCCGGTGAGGCGGGGTTACTGGGGTAACAGGATTGGAAAGCCCCATACCGTGCCTTGCAAGGTCACCGGAAAGTGTGGCTCTGTTACTGTGAGGATGGTGCCTGCTCCCCGTGGTTCCGGTATCGTGGCCGCTAGGGTTCCCAAGAAGGTGCTGCAGTTTGCTGGTATTGATGATGTGTTCACCTCATCCAGGGGGTCTACCAAGACTCTCGGAAACTTTGTCAAGGCTACTTTTGATTGTCTTCTGAAAACCTATGGTTTCTTGACACCTGAATTCTGGAGGGAGACTCGCTTCACAAAGTCCCCATTCCAAGAGCATACTGATCTTCTTGCCAAGCCAACCGGTAAGCTACTCCTGGACGCTGTTGAGAGGGTTGAGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015935 GO:0016020 GO:0019538 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0070013 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S5 Ribosomal_S5_C

Protein Analysis

276

Amino Acids

29.94

Weight (kDa)

10.4

Isoelectric Point (pI)

25.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_S5	PF00333	88 - 152	4.3e-30	Ribosomal protein S5, N-terminal domain
Ribosomal_S5_C	PF03719	172 - 244	1.1e-24	Ribosomal protein S5, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58380 AT1G58684 AT1G58983 AT1G59359 AT2G41840 AT3G57490
fragaria_vesca	FvH4_6g30350
malus_domestica	MD01G1213700.v1.1 MD03G1173600.v1.1 MD11G1191800.v1.1
prunus_persica	Prupe.2G075700_v2.0.a1 Prupe.2G075800_v2.0.a1
pyrus_communis	pycom03g13120 pycom11g16750
rosa_chinensis	RchiOBHm_Chr1g0319931 RchiOBHm_Chr2g0088631 RchiOBHm_Chr2g0091771 RchiOBHm_Chr2g0112861 RchiOBHm_Chr2g0136671 RchiOBHm_Chr5g0009771
rosa_laevigata	RLG00000004173 RLG00000019545
rosa_multiflora	Rmu_sc0000199.1_g000025 Rmu_sc0000213.1_g000003 Rmu_sc0000897.1_g000002 Rmu_sc0001299.1_g000030 Rmu_sc0001772.1_g000057 Rmu_sc0006440.1_g000007 Rmu_sc0006440.1_g000008 Rmu_sc0016044.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091420 Rroxscaffold_2G00148850 Rroxscaffold_5G00343290 Rroxscaffold_5G00345770
rosa_rugosa	Rorug01G0043800 Rorug01G0043900 Rorug01G0044000 Rorug01G0044100 Rorug01G0044200 Rorug01G0044300 Rorug02G0332200 Rorug03G0321500 Rorug04G0348800 Rorug05G0462600 Rorug07G0063800
rosa_samantha	Rh1AG112900 Rh1CG214700 Rh2AG065200 Rh2AG383100 Rh2BG064600 Rh2BG389800 Rh2BG508900 Rh2CG066100 Rh2CG241700 Rh2CG241800 Rh2CG369500 Rh2DG064500 Rh2DG406400 Rh2DG520600 Rh3CG318800 Rh4AG273900 Rh4BG279600 Rh4CG380100 Rh5AG485400 Rh5BG339500 Rh5CG236500 Rh5DG351900
rosa_wichuraiana	Rw2G031310 Rw7G032800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	23, 544
AccI	GTMKAC	1 cut(s)	644
AccII	CGCG	5 cut(s)	54, 69, 75, 108, 309
AcoI	YGGCCR	6 cut(s)	3, 49, 115, 160, 361, 573
AcsI	RAATTY	1 cut(s)	719
AcyI	GRCGYC	3 cut(s)	24, 103, 378
AfiI	CCNNNNNNNGG	6 cut(s)	127, 226, 318, 331, 411, 636
AgeI	ACCGGT	1 cut(s)	788
AgsI	TTSAA	1 cut(s)	331
AhdI	GACNNNNNGTC	1 cut(s)	377
AjiI	CACGTC	1 cut(s)	367
AjnI	CCWGG	2 cut(s)	635, 801
AluBI	AGCT	3 cut(s)	157, 436, 796
AluI	AGCT	3 cut(s)	157, 436, 796
Alw21I	GWGCWC	1 cut(s)	234
Alw26I	GTCTC	2 cut(s)	170, 725
AoxI	GGCC	9 cut(s)	3, 49, 64, 115, 160, 259, 333, 361, 573
ApeKI	GCWGC	2 cut(s)	387, 598
ApoI	RAATTY	1 cut(s)	719
AsiGI	ACCGGT	1 cut(s)	788
AspLEI	GCGC	2 cut(s)	26, 311
AspS9I	GGNCC	2 cut(s)	142, 321
AsuC2I	CCSGG	2 cut(s)	258, 413
AsuHPI	GGTGA	3 cut(s)	463, 502, 619
AvaII	GGWCC	2 cut(s)	142, 321
BanI	GGYRCC	2 cut(s)	23, 544
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	1 cut(s)	234
BbvI	GCAGC	2 cut(s)	399, 585
BccI	CCATC	1 cut(s)	535
BceAI	ACGGC	4 cut(s)	105, 147, 193, 376
BcgI	CGANNNNNNTGC	2 cut(s)	379, 413
BciT130I	CCWGG	2 cut(s)	637, 803
BcnI	CCSGG	2 cut(s)	258, 413
BcoDI	GTCTC	2 cut(s)	170, 725
BfaI	CTAG	1 cut(s)	579
BfmI	CTRYAG	1 cut(s)	599
BfoI	RGCGCY	1 cut(s)	27
BglII	AGATCT	2 cut(s)	183, 201
BisI	GCNGC	9 cut(s)	22, 27, 52, 67, 97, 118, 388, 576, 599
BlsI	GCNGC	9 cut(s)	23, 28, 53, 68, 98, 119, 389, 577, 600
Bme1390I	CCNGG	4 cut(s)	258, 413, 637, 803
Bme18I	GGWCC	2 cut(s)	142, 321
BmeRI	GACNNNNNGTC	1 cut(s)	377
BmgBI	CACGTC	1 cut(s)	367
BmgT120I	GGNCC	2 cut(s)	142, 321
BmiI	GGNNCC	7 cut(s)	25, 143, 144, 323, 546, 562, 585
BmrFI	CCNGG	4 cut(s)	258, 413, 637, 803
BmrI	ACTGGG	2 cut(s)	140, 475
BmuI	ACTGGG	2 cut(s)	140, 475
BoxI	GACNNNNGTC	1 cut(s)	87
BpiI	GAAGAC	1 cut(s)	680
BplI	GAGNNNNNCTC	2 cut(s)	718, 750
BpmI	CTGGAG	2 cut(s)	215, 745
BpuEI	CTTGAG	1 cut(s)	248
BpuMI	CCSGG	2 cut(s)	258, 413
BsaHI	GRCGYC	3 cut(s)	24, 103, 378
BsaJI	CCNNGG	7 cut(s)	52, 67, 85, 256, 412, 556, 636
BsaWI	WCCGGW	4 cut(s)	448, 512, 563, 788
Bsc4I	CCNNNNNNNGG	6 cut(s)	127, 226, 318, 331, 411, 636
Bse118I	RCCGGY	2 cut(s)	311, 788
Bse1I	ACTGG	2 cut(s)	146, 470
BseBI	CCWGG	2 cut(s)	637, 803
BseDI	CCNNGG	7 cut(s)	52, 67, 85, 256, 412, 556, 636
BseGI	GGATG	2 cut(s)	546, 632
BseLI	CCNNNNNNNGG	6 cut(s)	127, 226, 318, 331, 411, 636
BseNI	ACTGG	2 cut(s)	146, 470
BseRI	GAGGAG	4 cut(s)	27, 30, 143, 146
BseX3I	CGGCCG	2 cut(s)	49, 160
BseXI	GCAGC	2 cut(s)	399, 585
BsgI	GTGCAG	1 cut(s)	406
Bsh1236I	CGCG	5 cut(s)	54, 69, 75, 108, 309
Bsh1285I	CGRYCG	3 cut(s)	52, 85, 163
BshFI	GGCC	9 cut(s)	5, 51, 66, 117, 162, 261, 335, 363, 575
BshNI	GGYRCC	2 cut(s)	23, 544
BshTI	ACCGGT	1 cut(s)	788
BsiEI	CGRYCG	3 cut(s)	52, 85, 163
BsiHKAI	GWGCWC	1 cut(s)	234
BsiSI	CCGG	7 cut(s)	258, 312, 412, 449, 513, 564, 789
BslFI	GGGAC	2 cut(s)	128, 733
BslI	CCNNNNNNNGG	6 cut(s)	127, 226, 318, 331, 411, 636
BsmAI	GTCTC	2 cut(s)	170, 725
BsmBI	CGTCTC	1 cut(s)	170
BsmFI	GGGAC	2 cut(s)	128, 733
BsnI	GGCC	9 cut(s)	5, 51, 66, 117, 162, 261, 335, 363, 575
Bsp1286I	GDGCHC	1 cut(s)	234
Bsp143I	GATC	5 cut(s)	183, 201, 237, 282, 769
BspANI	GGCC	9 cut(s)	5, 51, 66, 117, 162, 261, 335, 363, 575
BspFNI	CGCG	5 cut(s)	54, 69, 75, 108, 309
BspHI	TCATGA	1 cut(s)	276
BspLI	GGNNCC	7 cut(s)	25, 143, 144, 323, 546, 562, 585
BspMAI	CTGCAG	1 cut(s)	603
BspT107I	GGYRCC	2 cut(s)	23, 544
BsrFI	RCCGGY	2 cut(s)	311, 788
BsrI	ACTGG	2 cut(s)	146, 470
BssAI	RCCGGY	2 cut(s)	311, 788
BssECI	CCNNGG	7 cut(s)	52, 67, 85, 256, 412, 556, 636
BssMI	GATC	5 cut(s)	183, 201, 237, 282, 769
BssNI	GRCGYC	3 cut(s)	24, 103, 378
Bst2UI	CCWGG	2 cut(s)	637, 803
Bst4CI	ACNGT	3 cut(s)	86, 496, 535
BstACI	GRCGYC	3 cut(s)	24, 103, 378
BstC8I	GCNNGC	5 cut(s)	31, 35, 101, 115, 549
BstDSI	CCRYGG	4 cut(s)	52, 67, 85, 556
BstEII	GGTNACC	1 cut(s)	508
BstENI	CCTNNNNNAGG	1 cut(s)	634
BstF5I	GGATG	2 cut(s)	546, 632
BstFNI	CGCG	5 cut(s)	54, 69, 75, 108, 309
BstH2I	RGCGCY	1 cut(s)	27
BstHHI	GCGC	2 cut(s)	26, 311
BstKTI	GATC	5 cut(s)	186, 204, 240, 285, 772
BstMAI	GTCTC	2 cut(s)	170, 725
BstMBI	GATC	5 cut(s)	183, 201, 237, 282, 769
BstMCI	CGRYCG	3 cut(s)	52, 85, 163
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 51, 72, 105, 114, 384
BstNI	CCWGG	2 cut(s)	637, 803
BstPAI	GACNNNNGTC	1 cut(s)	87
BstPI	GGTNACC	1 cut(s)	508
BstSCI	CCNGG	4 cut(s)	256, 411, 635, 801
BstSFI	CTRYAG	1 cut(s)	599
BstUI	CGCG	5 cut(s)	54, 69, 75, 108, 309
BstV1I	GCAGC	2 cut(s)	399, 585
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	2 cut(s)	183, 201
BstYI	RGATCY	2 cut(s)	183, 201
BstZI	CGGCCG	2 cut(s)	49, 160
BsuRI	GGCC	9 cut(s)	5, 51, 66, 117, 162, 261, 335, 363, 575
BtgI	CCRYGG	4 cut(s)	52, 67, 85, 556
BtrI	CACGTC	1 cut(s)	367
BtsCI	GGATG	2 cut(s)	546, 632
BtsIMutI	CAGTG	1 cut(s)	153
Cac8I	GCNNGC	5 cut(s)	31, 35, 101, 115, 549
CciI	TCATGA	1 cut(s)	276
CfoI	GCGC	2 cut(s)	26, 311
Cfr10I	RCCGGY	2 cut(s)	311, 788
Cfr13I	GGNCC	2 cut(s)	142, 321
Cfr42I	CCGCGG	2 cut(s)	55, 70
CseI	GACGC	4 cut(s)	81, 92, 367, 815
CspAI	ACCGGT	1 cut(s)	788
CviAII	CATG	2 cut(s)	277, 286
DinI	GGCGCC	1 cut(s)	25
DpnI	GATC	5 cut(s)	185, 203, 239, 284, 771
DpnII	GATC	5 cut(s)	183, 201, 237, 282, 769
DriI	GACNNNNNGTC	1 cut(s)	377
EaeI	YGGCCR	6 cut(s)	3, 49, 115, 160, 361, 573
EagI	CGGCCG	2 cut(s)	49, 160
Eam1105I	GACNNNNNGTC	1 cut(s)	377
EclXI	CGGCCG	2 cut(s)	49, 160
Eco147I	AGGCCT	1 cut(s)	335
Eco47I	GGWCC	2 cut(s)	142, 321
Eco52I	CGGCCG	2 cut(s)	49, 160
Eco91I	GGTNACC	1 cut(s)	508
EcoNI	CCTNNNNNAGG	1 cut(s)	634
EcoO109I	RGGNCCY	2 cut(s)	142, 321
EcoO65I	GGTNACC	1 cut(s)	508
EcoRI	GAATTC	1 cut(s)	719
EcoRII	CCWGG	2 cut(s)	635, 801
EgeI	GGCGCC	1 cut(s)	25
EheI	GGCGCC	1 cut(s)	25
Esp3I	CGTCTC	1 cut(s)	170
FaeI	CATG	2 cut(s)	280, 289
FaiI	YATR	5 cut(s)	278, 287, 492, 702, 765
FaqI	GGGAC	2 cut(s)	128, 733
FatI	CATG	2 cut(s)	276, 285
FauI	CCCGC	3 cut(s)	314, 332, 450
FblI	GTMKAC	1 cut(s)	644
Fnu4HI	GCNGC	9 cut(s)	22, 27, 52, 67, 97, 118, 388, 576, 599
FokI	GGATG	2 cut(s)	553, 619
Fsp4HI	GCNGC	9 cut(s)	22, 27, 52, 67, 97, 118, 388, 576, 599
FspBI	CTAG	1 cut(s)	579
GlaI	GCGC	2 cut(s)	25, 310
GluI	GCNGC	9 cut(s)	22, 27, 52, 67, 97, 118, 388, 576, 599
GsuI	CTGGAG	2 cut(s)	215, 745
HaeII	RGCGCY	1 cut(s)	27
HaeIII	GGCC	9 cut(s)	5, 51, 66, 117, 162, 261, 335, 363, 575
HapII	CCGG	7 cut(s)	258, 312, 412, 449, 513, 564, 789
HgaI	GACGC	4 cut(s)	81, 92, 367, 815
HhaI	GCGC	2 cut(s)	26, 311
Hin1I	GRCGYC	3 cut(s)	24, 103, 378
Hin1II	CATG	2 cut(s)	280, 289
Hin6I	GCGC	2 cut(s)	24, 309
HinP1I	GCGC	2 cut(s)	24, 309
HindIII	AAGCTT	1 cut(s)	434
HinfI	GANTC	5 cut(s)	57, 372, 445, 652, 733
HpaII	CCGG	7 cut(s)	258, 312, 412, 449, 513, 564, 789
HphI	GGTGA	3 cut(s)	463, 502, 619
Hpy166II	GTNNAC	2 cut(s)	627, 645
Hpy188I	TCNGA	5 cut(s)	62, 318, 371, 659, 693
Hpy188III	TCNNGA	5 cut(s)	194, 277, 295, 709, 724
Hpy8I	GTNNAC	2 cut(s)	627, 645
Hpy99I	CGWCG	5 cut(s)	108, 344, 347, 350, 371
HpyAV	CCTTC	2 cut(s)	346, 586
HpyCH4III	ACNGT	3 cut(s)	86, 496, 535
HpyCH4IV	ACGT	1 cut(s)	366
HpyCH4V	TGCA	3 cut(s)	387, 504, 601
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 51, 72, 105, 114, 384
HpySE526I	ACGT	1 cut(s)	366
Hsp92I	GRCGYC	3 cut(s)	24, 103, 378
Hsp92II	CATG	2 cut(s)	280, 289
HspAI	GCGC	2 cut(s)	24, 309
KasI	GGCGCC	1 cut(s)	23
KflI	GGGWCCC	1 cut(s)	142
KspI	CCGCGG	2 cut(s)	55, 70
Kzo9I	GATC	5 cut(s)	183, 201, 237, 282, 769
LmnI	GCTCC	5 cut(s)	196, 222, 229, 416, 556
Lsp1109I	GCAGC	2 cut(s)	399, 585
MaeI	CTAG	1 cut(s)	579
MaeII	ACGT	1 cut(s)	366
MaeIII	GTNAC	6 cut(s)	122, 148, 461, 470, 508, 529
MalI	GATC	5 cut(s)	185, 203, 239, 284, 771
MboI	GATC	5 cut(s)	183, 201, 237, 282, 769
MboII	GAAGA	3 cut(s)	292, 680, 764
MflI	RGATCY	2 cut(s)	183, 201
MhlI	GDGCHC	1 cut(s)	234
MluCI	AATT	1 cut(s)	719
Mly113I	GGCGCC	1 cut(s)	24
MlyI	GAGTC	3 cut(s)	366, 646, 727
MmeI	TCCRAC	1 cut(s)	349
MspA1I	CMGCKG	3 cut(s)	29, 54, 69
MspI	CCGG	7 cut(s)	258, 312, 412, 449, 513, 564, 789
MspR9I	CCNGG	4 cut(s)	258, 413, 637, 803
MvaI	CCWGG	2 cut(s)	637, 803
MvnI	CGCG	5 cut(s)	54, 69, 75, 108, 309
MwoI	GCNNNNNNNGC	6 cut(s)	30, 51, 72, 105, 114, 384
NarI	GGCGCC	1 cut(s)	24
NciI	CCSGG	2 cut(s)	258, 413
NdeII	GATC	5 cut(s)	183, 201, 237, 282, 769
NlaIII	CATG	2 cut(s)	280, 289
NlaIV	GGNNCC	7 cut(s)	25, 143, 144, 323, 546, 562, 585
NmeAIII	GCCGAG	2 cut(s)	138, 354
NmuCI	GTSAC	3 cut(s)	122, 148, 508
PagI	TCATGA	1 cut(s)	276
PceI	AGGCCT	1 cut(s)	335
PcsI	WCGNNNNNNNCGW	3 cut(s)	165, 348, 375
PfeI	GAWTC	2 cut(s)	57, 445
PflFI	GACNNNGTC	1 cut(s)	272
PfoI	TCCNGGA	1 cut(s)	801
PinAI	ACCGGT	1 cut(s)	788
PkrI	GCNGC	9 cut(s)	23, 28, 53, 68, 98, 119, 389, 577, 600
PleI	GAGTC	3 cut(s)	366, 646, 727
PluTI	GGCGCC	1 cut(s)	27
PpsI	GAGTC	3 cut(s)	366, 646, 727
PpuMI	RGGWCCY	2 cut(s)	142, 321
PshAI	GACNNNNGTC	1 cut(s)	87
Psp5II	RGGWCCY	2 cut(s)	142, 321
Psp6I	CCWGG	2 cut(s)	635, 801
PspEI	GGTNACC	1 cut(s)	508
PspGI	CCWGG	2 cut(s)	635, 801
PspN4I	GGNNCC	7 cut(s)	25, 143, 144, 323, 546, 562, 585
PspPI	GGNCC	2 cut(s)	142, 321
PspPPI	RGGWCCY	2 cut(s)	142, 321
PstI	CTGCAG	1 cut(s)	603
PsuI	RGATCY	2 cut(s)	183, 201
PsyI	GACNNNGTC	1 cut(s)	272
SacII	CCGCGG	2 cut(s)	55, 70
SatI	GCNGC	9 cut(s)	22, 27, 52, 67, 97, 118, 388, 576, 599
Sau3AI	GATC	5 cut(s)	183, 201, 237, 282, 769
Sau96I	GGNCC	2 cut(s)	142, 321
SchI	GAGTC	3 cut(s)	366, 646, 727
ScrFI	CCNGG	4 cut(s)	258, 413, 637, 803
SduI	GDGCHC	1 cut(s)	234
SfcI	CTRYAG	1 cut(s)	599
SfoI	GGCGCC	1 cut(s)	25
Sfr303I	CCGCGG	2 cut(s)	55, 70
SgrBI	CCGCGG	2 cut(s)	55, 70
SinI	GGWCC	2 cut(s)	142, 321
SmlI	CTYRAG	1 cut(s)	263
SmoI	CTYRAG	1 cut(s)	263
Sse9I	AATT	1 cut(s)	719
SseBI	AGGCCT	1 cut(s)	335
SspDI	GGCGCC	1 cut(s)	23
SspMI	CTAG	1 cut(s)	579
StuI	AGGCCT	1 cut(s)	335
StyD4I	CCNGG	4 cut(s)	256, 411, 635, 801
TaaI	ACNGT	3 cut(s)	86, 496, 535
TaiI	ACGT	1 cut(s)	369
TaqI	TCGA	2 cut(s)	91, 243
TasI	AATT	1 cut(s)	719
TauI	GCSGC	7 cut(s)	24, 29, 54, 69, 99, 120, 578
TfiI	GAWTC	2 cut(s)	57, 445
TscAI	CASTG	1 cut(s)	153
TseFI	GTSAC	3 cut(s)	122, 148, 508
TseI	GCWGC	2 cut(s)	387, 598
Tsp45I	GTSAC	3 cut(s)	122, 148, 508
TspDTI	ATGAA	1 cut(s)	293
TspRI	CASTG	1 cut(s)	153
Tth111I	GACNNNGTC	1 cut(s)	272
VpaK11BI	GGWCC	2 cut(s)	142, 321
XagI	CCTNNNNNAGG	1 cut(s)	634
XapI	RAATTY	1 cut(s)	719
XmiI	GTMKAC	1 cut(s)	644
XspI	CTAG	1 cut(s)	579

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.