Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000788

Physical Location & Seq

Genomic Coordinates Forward (+)

7499169 .. 7500728

Gene Structure 1560 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0044000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGCATTGGCGGGCATGGGATGAGTTGTGTAAACCTAAGAGTGTGGGAGGCATGGGTTTTCGCCATCTATTTTCTTTCAACCTGGCTATGCTTGCCAAGCAAGGATGGAGATTAATCCAAAGTCCTGATTCTTTGATTGGTCAGTTGTTCAAAGCCCTTTATTTTCCACATAGAAATTTTTGGGAAGCTACATTGGGTACACAACCTTCATATGCTTGGAGAAGCATTTTGCATGGGAGAGACATACTTCGAGCGGGCATCCAACGTCATATTGGGAATGGTTTGTCTACTAACATATGGACAGACCCATGGTTGTGTGGGGAGGAACTGGGTGTTCATTATTTTTCTGACCGTGTTACATATGTAGCTGATCTCTTCTTGTCCCCAGGTGTGTGGAATTCTACTTTGCTTTCAAAACTGTTTCCTGCTCCTATTGTTCAAAAGATCCTTGATATTCCGCTTAGCCCCCGGAATCATGCGGATAGATGGATTTGGGGTGGAGACAAAAAAGGCCGGTTCACAGTCAAATCTACTTACCATGTGGCTCGAAACAGAGTTCTTGCTAATCATTCTTCTGCACTAAATCCAAGTGCTGCTCTATGGCACCAATTGTGGAAAGCATCTGTGCCCAATAGTGTGAAAATTTGTGCATGGAAAGCAGCAGCTAATATTCTTCCTACTCGGAGTCGGCTAAGTGAACGTGGTATTGATCTTGATACCCAATGCCCACTCTGTGACGAAGAAGTTGAGACGCCTATCCGTACAGTTCGTGATTGTCCTCATGCTGCTAGTTTGATTCAAGGTGCCAATTTACCTCTGGTTTCGGCCCCTGTAAACGTTGCTGACTGGTTAGTTGCTGTCCATACTTTGAATTCTCAAAGCTTTGCCCCTTCCTTGATGCTCTTGTGGGCCACCTGGAGAAATAGGAATGCCAAAGTTTGGGACGGAGATTTCAAGCAAGCCTCTGAGGTTGTACCAATGACGTTGGGATGGTGGGAGGATTACAAAGCAGCTCATGTGGTTACTCAGTCCGTTTCGGGGACTCGAGCGTCGTCAACATGGACTAAACCTCCAGTTGGTTATGTGAAGCTGAATGTTGATGCAGCTTTTGATCAGACCTCTAGGCGTACGGGGTTGGGAGGAGTGTTTCGTGATCATACTGGGATGTTTTTGCATGGGTTTCGGCATTCGGTCATGTCAGCAAACTCGGCCAAACATGCTGAGTTGTTGGCTCTGCTTCTTAGGGTACAGTTAGCCATTGAGCATCATCTATCCCCCCTGATAGTGGAAACCGATTGCCTGGAGTTGGTGCAGGCTCTGTCGTCTTCTTTTTTAGACCATTCGGATTTGGGTTTTTTGTTAGCAGACCTACGGGATTTGTTGCATGAAGCTTTGGATGCTCGAGTTTTTAAGGTAGGAAGACTAGCCAATGGAGTAGCTCATATCTTGGCGCAGGATGCTAAGACTGCCGAATCTCAGTTGGAATTTTTTTCAAATATGCCTTCGTCTGTGGAGGCAACTTTAATCTATGATTGTAATGATGTTTCATCAATGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015935 GO:0016020 GO:0019538 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0070013 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S5 Ribosomal_S5_C

Protein Analysis

519

Amino Acids

57.98

Weight (kDa)

8.36

Isoelectric Point (pI)

41.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	173 - 263	2.5e-13	zinc-binding in reverse transcriptase
RVT_3	PF13456	365 - 487	8.8e-20	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58380 AT1G58684 AT1G58983 AT1G59359 AT2G41840 AT3G57490
fragaria_vesca	FvH4_6g30350
malus_domestica	MD01G1213700.v1.1 MD03G1173600.v1.1 MD11G1191800.v1.1
prunus_persica	Prupe.2G075700_v2.0.a1 Prupe.2G075800_v2.0.a1
pyrus_communis	pycom03g13120 pycom11g16750
rosa_chinensis	RchiOBHm_Chr1g0319931 RchiOBHm_Chr2g0088631 RchiOBHm_Chr2g0091771 RchiOBHm_Chr2g0112861 RchiOBHm_Chr2g0136671 RchiOBHm_Chr5g0009771
rosa_laevigata	RLG00000004173 RLG00000019545
rosa_multiflora	Rmu_sc0000199.1_g000025 Rmu_sc0000213.1_g000003 Rmu_sc0000897.1_g000002 Rmu_sc0001299.1_g000030 Rmu_sc0001772.1_g000057 Rmu_sc0006440.1_g000007 Rmu_sc0006440.1_g000008 Rmu_sc0016044.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091420 Rroxscaffold_2G00148850 Rroxscaffold_5G00343290 Rroxscaffold_5G00345770
rosa_rugosa	Rorug01G0043800 Rorug01G0043900 Rorug01G0044000 Rorug01G0044100 Rorug01G0044200 Rorug01G0044300 Rorug02G0332200 Rorug03G0321500 Rorug04G0348800 Rorug05G0462600 Rorug07G0063800
rosa_samantha	Rh1AG112900 Rh1CG214700 Rh2AG065200 Rh2AG383100 Rh2BG064600 Rh2BG389800 Rh2BG508900 Rh2CG066100 Rh2CG241700 Rh2CG241800 Rh2CG369500 Rh2DG064500 Rh2DG406400 Rh2DG520600 Rh3CG318800 Rh4AG273900 Rh4BG279600 Rh4CG380100 Rh5AG485400 Rh5BG339500 Rh5CG236500 Rh5DG351900
rosa_wichuraiana	Rw2G031310 Rw7G032800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1048
AccB1I	GGYRCC	2 cut(s)	603, 803
AccB7I	CCANNNNNTGG	1 cut(s)	939
AccBSI	CCGCTC	1 cut(s)	254
AccI	GTMKAC	1 cut(s)	287
AciI	CCGC	4 cut(s)	10, 254, 458, 479
AclI	AACGTT	1 cut(s)	837
AclWI	GGATC	1 cut(s)	439
AcoI	YGGCCR	1 cut(s)	1209
AcsI	RAATTY	5 cut(s)	175, 397, 642, 871, 1484
AcyI	GRCGYC	1 cut(s)	752
AdeI	CACNNNGTG	1 cut(s)	734
AfaI	GTAC	5 cut(s)	199, 763, 975, 1129, 1248
AfiI	CCNNNNNNNGG	5 cut(s)	939, 1038, 1076, 1285, 1306
AgsI	TTSAA	8 cut(s)	79, 151, 414, 440, 800, 871, 955, 1494
AjnI	CCWGG	4 cut(s)	81, 385, 914, 1299
AluBI	AGCT	9 cut(s)	188, 368, 665, 882, 1013, 1090, 1106, 1391, 1439
AluI	AGCT	9 cut(s)	188, 368, 665, 882, 1013, 1090, 1106, 1391, 1439
Alw26I	GTCTC	3 cut(s)	234, 495, 743
AlwI	GGATC	1 cut(s)	439
AlwNI	CAGNNNCTG	1 cut(s)	1318
Ama87I	CYCGRG	2 cut(s)	1044, 1401
AoxI	GGCC	4 cut(s)	511, 825, 909, 1209
ApeKI	GCWGC	6 cut(s)	593, 659, 662, 785, 1010, 1103
ApoI	RAATTY	5 cut(s)	175, 397, 642, 871, 1484
AseI	ATTAAT	1 cut(s)	113
AspLEI	GCGC	1 cut(s)	1453
AspS9I	GGNCC	2 cut(s)	826, 909
AsuC2I	CCSGG	1 cut(s)	469
AvaI	CYCGRG	2 cut(s)	1044, 1401
BaeGI	GKGCMC	1 cut(s)	630
BanI	GGYRCC	2 cut(s)	603, 803
BarI	GAAGNNNNNNTAC	2 cut(s)	190, 222
BbsI	GAAGAC	2 cut(s)	1317, 1426
BbvI	GCAGC	6 cut(s)	580, 671, 674, 772, 1022, 1115
BccI	CCATC	4 cut(s)	72, 99, 480, 984
BcgI	CGANNNNNNTGC	2 cut(s)	1163, 1197
BciT130I	CCWGG	4 cut(s)	83, 387, 916, 1301
BclI	TGATCA	2 cut(s)	1111, 1153
BcnI	CCSGG	1 cut(s)	469
BcoDI	GTCTC	3 cut(s)	234, 495, 743
BfaI	CTAG	3 cut(s)	789, 1122, 1424
BisI	GCNGC	6 cut(s)	594, 660, 663, 786, 1011, 1104
BlpI	GCTNAGC	1 cut(s)	461
BlsI	GCNGC	6 cut(s)	595, 661, 664, 787, 1012, 1105
Bme1390I	CCNGG	5 cut(s)	83, 387, 469, 916, 1301
BmeT110I	CYCGRG	2 cut(s)	1044, 1401
BmgT120I	GGNCC	2 cut(s)	826, 909
BmiI	GGNNCC	3 cut(s)	605, 805, 828
BmrFI	CCNGG	5 cut(s)	83, 387, 469, 916, 1301
BmrI	ACTGGG	2 cut(s)	338, 1170
BmsI	GCATC	7 cut(s)	267, 629, 888, 1090, 1273, 1387, 1447
BmuI	ACTGGG	2 cut(s)	338, 1170
BpiI	GAAGAC	2 cut(s)	1317, 1426
BpmI	CTGGAG	3 cut(s)	937, 1056, 1322
Bpu1102I	GCTNAGC	1 cut(s)	461
BpuMI	CCSGG	1 cut(s)	469
BsaHI	GRCGYC	1 cut(s)	752
BsaJI	CCNNGG	3 cut(s)	308, 385, 467
BsaXI	ACNNNNNCTCC	2 cut(s)	1054, 1084
Bsc4I	CCNNNNNNNGG	5 cut(s)	939, 1038, 1076, 1285, 1306
Bse118I	RCCGGY	1 cut(s)	513
Bse1I	ACTGG	4 cut(s)	333, 851, 1073, 1165
BseBI	CCWGG	4 cut(s)	83, 387, 916, 1301
BseDI	CCNNGG	3 cut(s)	308, 385, 467
BseGI	GGATG	7 cut(s)	25, 110, 258, 995, 1170, 1402, 1462
BseLI	CCNNNNNNNGG	5 cut(s)	939, 1038, 1076, 1285, 1306
BseMII	CTCAG	4 cut(s)	957, 1040, 1212, 1490
BseNI	ACTGG	4 cut(s)	333, 851, 1073, 1165
BseRI	GAGGAG	1 cut(s)	1155
BseSI	GKGCMC	1 cut(s)	630
BseXI	GCAGC	6 cut(s)	580, 671, 674, 772, 1022, 1115
BsgI	GTGCAG	2 cut(s)	561, 1331
BshFI	GGCC	4 cut(s)	513, 827, 911, 1211
BshNI	GGYRCC	2 cut(s)	603, 803
BsiHKCI	CYCGRG	2 cut(s)	1044, 1401
BsiSI	CCGG	2 cut(s)	469, 514
BsiWI	CGTACG	1 cut(s)	1127
BslFI	GGGAC	3 cut(s)	367, 956, 1054
BslI	CCNNNNNNNGG	5 cut(s)	939, 1038, 1076, 1285, 1306
BsmAI	GTCTC	3 cut(s)	234, 495, 743
BsmBI	CGTCTC	1 cut(s)	743
BsmFI	GGGAC	3 cut(s)	367, 956, 1054
BsmI	GAATGC	2 cut(s)	934, 1186
BsnI	GGCC	4 cut(s)	513, 827, 911, 1211
BsoBI	CYCGRG	2 cut(s)	1044, 1401
Bsp1286I	GDGCHC	1 cut(s)	630
Bsp143I	GATC	5 cut(s)	370, 444, 709, 1111, 1153
Bsp1720I	GCTNAGC	1 cut(s)	461
Bsp19I	CCATGG	1 cut(s)	308
BspACI	CCGC	4 cut(s)	10, 254, 458, 479
BspANI	GGCC	4 cut(s)	513, 827, 911, 1211
BspCNI	CTCAG	4 cut(s)	958, 1039, 1213, 1489
BspLI	GGNNCC	3 cut(s)	605, 805, 828
BspPI	GGATC	1 cut(s)	439
BspT107I	GGYRCC	2 cut(s)	603, 803
BsrBI	CCGCTC	1 cut(s)	254
BsrFI	RCCGGY	1 cut(s)	513
BsrI	ACTGG	4 cut(s)	333, 851, 1073, 1165
BssAI	RCCGGY	1 cut(s)	513
BssECI	CCNNGG	3 cut(s)	308, 385, 467
BssMI	GATC	5 cut(s)	370, 444, 709, 1111, 1153
BssNI	GRCGYC	1 cut(s)	752
BssT1I	CCWWGG	1 cut(s)	308
Bst2UI	CCWGG	4 cut(s)	83, 387, 916, 1301
Bst4CI	ACNGT	5 cut(s)	353, 420, 523, 766, 1251
Bst6I	CTCTTC	1 cut(s)	380
BstACI	GRCGYC	1 cut(s)	752
BstC8I	GCNNGC	5 cut(s)	12, 93, 256, 960, 1314
BstDEI	CTNAG	9 cut(s)	36, 461, 692, 966, 1026, 1221, 1241, 1461, 1476
BstDSI	CCRYGG	1 cut(s)	308
BstF5I	GGATG	7 cut(s)	25, 110, 258, 995, 1170, 1402, 1462
BstHHI	GCGC	1 cut(s)	1453
BstKTI	GATC	5 cut(s)	373, 447, 712, 1114, 1156
BstMAI	GTCTC	3 cut(s)	234, 495, 743
BstMBI	GATC	5 cut(s)	370, 444, 709, 1111, 1153
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 97, 656, 1208, 1217, 1397, 1457, 1466
BstNI	CCWGG	4 cut(s)	83, 387, 916, 1301
BstNSI	RCATGY	1 cut(s)	1220
BstSCI	CCNGG	5 cut(s)	81, 385, 467, 914, 1299
BstSLI	GKGCMC	1 cut(s)	630
BstV1I	GCAGC	6 cut(s)	580, 671, 674, 772, 1022, 1115
BstV2I	GAAGAC	2 cut(s)	1317, 1426
BstX2I	RGATCY	1 cut(s)	444
BstXI	CCANNNNNNTGG	1 cut(s)	393
BstYI	RGATCY	1 cut(s)	444
BsuRI	GGCC	4 cut(s)	513, 827, 911, 1211
BtgI	CCRYGG	1 cut(s)	308
BtsCI	GGATG	7 cut(s)	25, 110, 258, 995, 1170, 1402, 1462
Cac8I	GCNNGC	5 cut(s)	12, 93, 256, 960, 1314
CaiI	CAGNNNCTG	1 cut(s)	1318
CfoI	GCGC	1 cut(s)	1453
Cfr10I	RCCGGY	1 cut(s)	513
Cfr13I	GGNCC	2 cut(s)	826, 909
CseI	GACGC	2 cut(s)	760, 1038
Csp6I	GTAC	5 cut(s)	198, 762, 974, 1128, 1247
CviQI	GTAC	5 cut(s)	198, 762, 974, 1128, 1247
DdeI	CTNAG	9 cut(s)	36, 461, 692, 966, 1026, 1221, 1241, 1461, 1476
DpnI	GATC	5 cut(s)	372, 446, 711, 1113, 1155
DpnII	GATC	5 cut(s)	370, 444, 709, 1111, 1153
DraIII	CACNNNGTG	1 cut(s)	734
DrdI	GACNNNNNNGTC	1 cut(s)	1048
DseDI	GACNNNNNNGTC	1 cut(s)	1048
EaeI	YGGCCR	1 cut(s)	1209
Eam1104I	CTCTTC	1 cut(s)	380
EarI	CTCTTC	1 cut(s)	380
Eco130I	CCWWGG	1 cut(s)	308
Eco88I	CYCGRG	2 cut(s)	1044, 1401
EcoRI	GAATTC	2 cut(s)	397, 871
EcoRII	CCWGG	4 cut(s)	81, 385, 914, 1299
EcoT14I	CCWWGG	1 cut(s)	308
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	308
Esp3I	CGTCTC	1 cut(s)	743
FaqI	GGGAC	3 cut(s)	367, 956, 1054
FauI	CCCGC	2 cut(s)	3, 247
FauNDI	CATATG	3 cut(s)	211, 296, 361
FbaI	TGATCA	2 cut(s)	1111, 1153
FblI	GTMKAC	1 cut(s)	287
Fnu4HI	GCNGC	6 cut(s)	594, 660, 663, 786, 1011, 1104
FokI	GGATG	7 cut(s)	32, 117, 245, 1002, 1177, 1409, 1469
Fsp4HI	GCNGC	6 cut(s)	594, 660, 663, 786, 1011, 1104
FspBI	CTAG	3 cut(s)	789, 1122, 1424
GlaI	GCGC	1 cut(s)	1452
GluI	GCNGC	6 cut(s)	594, 660, 663, 786, 1011, 1104
GsuI	CTGGAG	3 cut(s)	937, 1056, 1322
HaeIII	GGCC	4 cut(s)	513, 827, 911, 1211
HapII	CCGG	2 cut(s)	469, 514
HgaI	GACGC	2 cut(s)	760, 1038
HhaI	GCGC	1 cut(s)	1453
Hin1I	GRCGYC	1 cut(s)	752
Hin6I	GCGC	1 cut(s)	1451
HinP1I	GCGC	1 cut(s)	1451
HincII	GTYRAC	1 cut(s)	1056
HindII	GTYRAC	1 cut(s)	1056
HindIII	AAGCTT	2 cut(s)	880, 1389
HinfI	GANTC	6 cut(s)	128, 472, 685, 796, 1042, 1472
HpaII	CCGG	2 cut(s)	469, 514
Hpy166II	GTNNAC	7 cut(s)	32, 200, 288, 519, 698, 835, 1056
Hpy188I	TCNGA	5 cut(s)	349, 684, 967, 1116, 1345
Hpy188III	TCNNGA	4 cut(s)	125, 713, 770, 1151
Hpy8I	GTNNAC	7 cut(s)	32, 200, 288, 519, 698, 835, 1056
Hpy99I	CGWCG	1 cut(s)	1054
HpyAV	CCTTC	3 cut(s)	216, 900, 1512
HpyCH4III	ACNGT	5 cut(s)	353, 420, 523, 766, 1251
HpyCH4IV	ACGT	4 cut(s)	265, 700, 837, 983
HpyCH4V	TGCA	8 cut(s)	4, 232, 578, 650, 1103, 1174, 1312, 1384
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 97, 656, 1208, 1217, 1397, 1457, 1466
HpyF3I	CTNAG	9 cut(s)	36, 461, 692, 966, 1026, 1221, 1241, 1461, 1476
HpySE526I	ACGT	4 cut(s)	265, 700, 837, 983
Hsp92I	GRCGYC	1 cut(s)	752
HspAI	GCGC	1 cut(s)	1451
Ksp22I	TGATCA	2 cut(s)	1111, 1153
Kzo9I	GATC	5 cut(s)	370, 444, 709, 1111, 1153
LmnI	GCTCC	1 cut(s)	433
Lsp1109I	GCAGC	6 cut(s)	580, 671, 674, 772, 1022, 1115
LweI	GCATC	7 cut(s)	267, 629, 888, 1090, 1273, 1387, 1447
MaeI	CTAG	3 cut(s)	789, 1122, 1424
MaeII	ACGT	4 cut(s)	265, 700, 837, 983
MaeIII	GTNAC	3 cut(s)	355, 734, 1021
MalI	GATC	5 cut(s)	372, 446, 711, 1113, 1155
MbiI	CCGCTC	1 cut(s)	254
MboI	GATC	5 cut(s)	370, 444, 709, 1111, 1153
MboII	GAAGA	6 cut(s)	367, 564, 665, 752, 1317, 1431
MfeI	CAATTG	1 cut(s)	608
MflI	RGATCY	1 cut(s)	444
MhlI	GDGCHC	1 cut(s)	630
MluCI	AATT	8 cut(s)	175, 397, 608, 642, 808, 871, 1484, 1555
MlyI	GAGTC	2 cut(s)	694, 1036
MmeI	TCCRAC	2 cut(s)	286, 1461
Mph1103I	ATGCAT	1 cut(s)	6
MseI	TTAA	3 cut(s)	113, 1410, 1523
MslI	CAYNNNNRTG	1 cut(s)	313
MspI	CCGG	2 cut(s)	469, 514
MspR9I	CCNGG	5 cut(s)	83, 387, 469, 916, 1301
MunI	CAATTG	1 cut(s)	608
Mva1269I	GAATGC	2 cut(s)	934, 1186
MvaI	CCWGG	4 cut(s)	83, 387, 916, 1301
MwoI	GCNNNNNNNGC	8 cut(s)	92, 97, 656, 1208, 1217, 1397, 1457, 1466
NciI	CCSGG	1 cut(s)	469
NcoI	CCATGG	1 cut(s)	308
NdeI	CATATG	3 cut(s)	211, 296, 361
NdeII	GATC	5 cut(s)	370, 444, 709, 1111, 1153
NlaIV	GGNNCC	3 cut(s)	605, 805, 828
NmeAIII	GCCGAG	1 cut(s)	1187
NmuCI	GTSAC	1 cut(s)	734
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1220
PaeR7I	CTCGAG	2 cut(s)	1044, 1401
PctI	GAATGC	2 cut(s)	934, 1186
PfeI	GAWTC	4 cut(s)	128, 472, 796, 1472
Pfl23II	CGTACG	1 cut(s)	1127
PflMI	CCANNNNNTGG	1 cut(s)	939
PkrI	GCNGC	6 cut(s)	595, 661, 664, 787, 1012, 1105
PleI	GAGTC	2 cut(s)	693, 1036
PpsI	GAGTC	2 cut(s)	693, 1036
PshBI	ATTAAT	1 cut(s)	113
Psp1406I	AACGTT	1 cut(s)	837
Psp6I	CCWGG	4 cut(s)	81, 385, 914, 1299
PspGI	CCWGG	4 cut(s)	81, 385, 914, 1299
PspLI	CGTACG	1 cut(s)	1127
PspN4I	GGNNCC	3 cut(s)	605, 805, 828
PspPI	GGNCC	2 cut(s)	826, 909
PspXI	VCTCGAGB	2 cut(s)	1044, 1401
PstNI	CAGNNNCTG	1 cut(s)	1318
PsuI	RGATCY	1 cut(s)	444
RsaI	GTAC	5 cut(s)	199, 763, 975, 1129, 1248
RsaNI	GTAC	5 cut(s)	198, 762, 974, 1128, 1247
RseI	CAYNNNNRTG	1 cut(s)	313
SaqAI	TTAA	3 cut(s)	113, 1410, 1523
SatI	GCNGC	6 cut(s)	594, 660, 663, 786, 1011, 1104
Sau3AI	GATC	5 cut(s)	370, 444, 709, 1111, 1153
Sau96I	GGNCC	2 cut(s)	826, 909
SchI	GAGTC	2 cut(s)	694, 1036
ScrFI	CCNGG	5 cut(s)	83, 387, 469, 916, 1301
SduI	GDGCHC	1 cut(s)	630
SfaNI	GCATC	7 cut(s)	267, 629, 888, 1090, 1273, 1387, 1447
Sfr274I	CTCGAG	2 cut(s)	1044, 1401
SlaI	CTCGAG	2 cut(s)	1044, 1401
SmiMI	CAYNNNNRTG	1 cut(s)	313
SmlI	CTYRAG	2 cut(s)	1044, 1401
SmoI	CTYRAG	2 cut(s)	1044, 1401
Sse9I	AATT	8 cut(s)	175, 397, 608, 642, 808, 871, 1484, 1555
SsiI	CCGC	4 cut(s)	10, 254, 458, 479
SspI	AATATT	1 cut(s)	670
SspMI	CTAG	3 cut(s)	789, 1122, 1424
StyD4I	CCNGG	5 cut(s)	81, 385, 467, 914, 1299
StyI	CCWWGG	1 cut(s)	308
TaaI	ACNGT	5 cut(s)	353, 420, 523, 766, 1251
TaiI	ACGT	4 cut(s)	268, 703, 840, 986
TaqI	TCGA	4 cut(s)	250, 547, 1045, 1402
TaqII	GACCGA	1 cut(s)	1180
TasI	AATT	8 cut(s)	175, 397, 608, 642, 808, 871, 1484, 1555
TfiI	GAWTC	4 cut(s)	128, 472, 796, 1472
Tru1I	TTAA	3 cut(s)	113, 1410, 1523
Tru9I	TTAA	3 cut(s)	113, 1410, 1523
TseFI	GTSAC	1 cut(s)	734
TseI	GCWGC	6 cut(s)	593, 659, 662, 785, 1010, 1103
Tsp45I	GTSAC	1 cut(s)	734
TspDTI	ATGAA	4 cut(s)	198, 326, 1401, 1536
TspGWI	ACGGA	3 cut(s)	749, 960, 1021
Van91I	CCANNNNNTGG	1 cut(s)	939
VspI	ATTAAT	1 cut(s)	113
XapI	RAATTY	5 cut(s)	175, 397, 642, 871, 1484
XceI	RCATGY	1 cut(s)	1220
XcmI	CCANNNNNNNNNTGG	2 cut(s)	269, 814
XhoI	CTCGAG	2 cut(s)	1044, 1401
XmiI	GTMKAC	1 cut(s)	287
XspI	CTAG	3 cut(s)	789, 1122, 1424
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.