RchiOBHm_Chr5g0014171

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
9649719 .. 9652743
3025 bp
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UTR
Exon/CDS
Intron
PRQ29464

Sequence Viewer

Length: 159 bp
ATGAAGGCCTATGATTCTGGTTTGGATGTTTCAAGGATGCTAGAGTCTAACATGGTTCAGATGCTAGCTGCATTGGAGGAGATTGAGGATGTAGAACTGTTAAGGTTGCATCTCTTTGTGGCCCAACTTGCCCTTGTTCAAACATTTTATTATGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

52

Amino Acids

5.98

Weight (kDa)

4.33

Isoelectric Point (pI)

66.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 33, 140
AluBI AGCT 1 cut(s) 68
AluI AGCT 1 cut(s) 68
AoxI GGCC 2 cut(s) 6, 120
ApeKI GCWGC 1 cut(s) 68
AspS9I GGNCC 1 cut(s) 121
AsuNHI GCTAGC 1 cut(s) 64
BbvI GCAGC 1 cut(s) 55
BfaI CTAG 2 cut(s) 41, 65
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
BmgT120I GGNCC 1 cut(s) 121
BmsI GCATC 3 cut(s) 27, 51, 118
BmtI GCTAGC 1 cut(s) 68
BseGI GGATG 3 cut(s) 31, 42, 94
BseRI GAGGAG 1 cut(s) 92
BseXI GCAGC 1 cut(s) 55
BshFI GGCC 2 cut(s) 8, 122
BsnI GGCC 2 cut(s) 8, 122
BspANI GGCC 2 cut(s) 8, 122
BspOI GCTAGC 1 cut(s) 68
Bst4CI ACNGT 1 cut(s) 99
BstC8I GCNNGC 1 cut(s) 66
BstDEI CTNAG 1 cut(s) 156
BstF5I GGATG 3 cut(s) 31, 42, 94
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstV1I GCAGC 1 cut(s) 55
BsuRI GGCC 2 cut(s) 8, 122
BtsCI GGATG 3 cut(s) 31, 42, 94
Cac8I GCNNGC 1 cut(s) 66
Cfr13I GGNCC 1 cut(s) 121
CviAII CATG 1 cut(s) 52
CviJI RGCY 3 cut(s) 8, 68, 122
CviKI_1 RGCY 3 cut(s) 8, 68, 122
DdeI CTNAG 1 cut(s) 156
Eco147I AGGCCT 1 cut(s) 8
FaeI CATG 1 cut(s) 55
FaiI YATR 3 cut(s) 12, 53, 153
FatI CATG 1 cut(s) 51
Fnu4HI GCNGC 1 cut(s) 69
FokI GGATG 3 cut(s) 38, 49, 101
Fsp4HI GCNGC 1 cut(s) 69
FspBI CTAG 2 cut(s) 41, 65
GluI GCNGC 1 cut(s) 69
HaeIII GGCC 2 cut(s) 8, 122
Hin1II CATG 1 cut(s) 55
HinfI GANTC 2 cut(s) 14, 44
Hpy188I TCNGA 1 cut(s) 60
HpyCH4III ACNGT 1 cut(s) 99
HpyCH4V TGCA 2 cut(s) 71, 109
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
HpyF3I CTNAG 1 cut(s) 156
Hsp92II CATG 1 cut(s) 55
LpnPI CCDG 1 cut(s) 3
Lsp1109I GCAGC 1 cut(s) 55
LweI GCATC 3 cut(s) 27, 51, 118
MaeI CTAG 2 cut(s) 41, 65
MlyI GAGTC 1 cut(s) 53
MnlI CCTC 2 cut(s) 70, 79
MseI TTAA 1 cut(s) 101
MwoI GCNNNNNNNGC 1 cut(s) 128
NheI GCTAGC 1 cut(s) 64
NlaIII CATG 1 cut(s) 55
PceI AGGCCT 1 cut(s) 8
PfeI GAWTC 1 cut(s) 14
PkrI GCNGC 1 cut(s) 70
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
PspPI GGNCC 1 cut(s) 121
SaqAI TTAA 1 cut(s) 101
SatI GCNGC 1 cut(s) 69
Sau96I GGNCC 1 cut(s) 121
SchI GAGTC 1 cut(s) 53
SetI ASST 2 cut(s) 70, 107
SfaNI GCATC 3 cut(s) 27, 51, 118
SgeI CNNG 7 cut(s) 30, 45, 53, 64, 77, 140, 146
SseBI AGGCCT 1 cut(s) 8
SspMI CTAG 2 cut(s) 41, 65
StuI AGGCCT 1 cut(s) 8
TaaI ACNGT 1 cut(s) 99
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 1 cut(s) 101
Tru9I TTAA 1 cut(s) 101
TseI GCWGC 1 cut(s) 68
TspDTI ATGAA 1 cut(s) 17
XspI CTAG 2 cut(s) 41, 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.