Translational activator
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g37881 |
| malus_domestica | MD02G1124000.v1.1 MD15G1238000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0125031 RchiOBHm_Chr5g0014171 RchiOBHm_Chr5g0043171 RchiOBHm_Chr5g0076521 |
| rosa_laevigata | RLG00000007907 RLG00000008384 RLG00000009432 |
| rosa_multiflora | Rmu_co8234657.1_g000001 Rmu_sc0022240.1_g000002 |
| rosa_roxburghii | Rroxscaffold_175G00432370 Rroxscaffold_1G00062410 Rroxscaffold_1G00062420 Rroxscaffold_1G00064350 Rroxscaffold_2G00121150 Rroxscaffold_3G00221160 Rroxscaffold_6G00392830 Rroxscaffold_7G00185980 |
| rosa_samantha | Rh1CG046400 Rh2AG316900 Rh2BG321900 Rh2BG569300 Rh2CG328400 Rh2DG412600 Rh3CG300100 Rh4AG111100 Rh4AG163900 Rh4AG221600 Rh4DG159800 Rh5AG289900 Rh5BG247200 Rh5BG296400 Rh5CG119100 Rh5CG556300 Rh5DG305900 Rh5DG529800 Rh6AG197800 Rh6CG246800 Rh6DG138600 Rh6DG238200 Rh7AG475600 Rh7AG479400 Rh7CG460700 Rh7DG258400 |
| rosa_wichuraiana | Rw1G000510 Rw2G014980 Rw4G016950 Rw7G040020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 112 |
| AclWI | GGATC | 1 cut(s) | 74 |
| AcoI | YGGCCR | 1 cut(s) | 49 |
| AcsI | RAATTY | 1 cut(s) | 181 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AgsI | TTSAA | 2 cut(s) | 258, 302 |
| AluBI | AGCT | 2 cut(s) | 11, 175 |
| AluI | AGCT | 2 cut(s) | 11, 175 |
| AlwI | GGATC | 1 cut(s) | 74 |
| AoxI | GGCC | 1 cut(s) | 49 |
| ApeKI | GCWGC | 2 cut(s) | 175, 233 |
| ApoI | RAATTY | 1 cut(s) | 181 |
| BalI | TGGCCA | 1 cut(s) | 51 |
| BbvI | GCAGC | 2 cut(s) | 162, 245 |
| BccI | CCATC | 1 cut(s) | 99 |
| BisI | GCNGC | 2 cut(s) | 176, 234 |
| BlsI | GCNGC | 2 cut(s) | 177, 235 |
| BpmI | CTGGAG | 1 cut(s) | 60 |
| BseMII | CTCAG | 2 cut(s) | 183, 261 |
| BseRI | GAGGAG | 2 cut(s) | 86, 363 |
| BseXI | GCAGC | 2 cut(s) | 162, 245 |
| BshFI | GGCC | 1 cut(s) | 51 |
| BsnI | GGCC | 1 cut(s) | 51 |
| Bsp143I | GATC | 2 cut(s) | 66, 292 |
| BspACI | CCGC | 1 cut(s) | 112 |
| BspANI | GGCC | 1 cut(s) | 51 |
| BspCNI | CTCAG | 2 cut(s) | 182, 262 |
| BspPI | GGATC | 1 cut(s) | 74 |
| BssMI | GATC | 2 cut(s) | 66, 292 |
| Bst6I | CTCTTC | 4 cut(s) | 76, 204, 219, 338 |
| BstC8I | GCNNGC | 1 cut(s) | 355 |
| BstDEI | CTNAG | 2 cut(s) | 169, 270 |
| BstKTI | GATC | 2 cut(s) | 69, 295 |
| BstMBI | GATC | 2 cut(s) | 66, 292 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 233 |
| BstNSI | RCATGY | 1 cut(s) | 288 |
| BstV1I | GCAGC | 2 cut(s) | 162, 245 |
| BstX2I | RGATCY | 1 cut(s) | 66 |
| BstYI | RGATCY | 1 cut(s) | 66 |
| BsuRI | GGCC | 1 cut(s) | 51 |
| BtsIMutI | CAGTG | 1 cut(s) | 374 |
| Cac8I | GCNNGC | 1 cut(s) | 355 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CviAII | CATG | 3 cut(s) | 280, 285, 307 |
| CviJI | RGCY | 4 cut(s) | 11, 51, 175, 254 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 51, 175, 254 |
| CviQI | GTAC | 1 cut(s) | 4 |
| DdeI | CTNAG | 2 cut(s) | 169, 270 |
| DpnI | GATC | 2 cut(s) | 68, 294 |
| DpnII | GATC | 2 cut(s) | 66, 292 |
| DraI | TTTAAA | 1 cut(s) | 139 |
| EaeI | YGGCCR | 1 cut(s) | 49 |
| Eam1104I | CTCTTC | 4 cut(s) | 76, 204, 219, 338 |
| EarI | CTCTTC | 4 cut(s) | 76, 204, 219, 338 |
| FaeI | CATG | 3 cut(s) | 283, 288, 310 |
| FatI | CATG | 3 cut(s) | 279, 284, 306 |
| FauI | CCCGC | 1 cut(s) | 119 |
| Fnu4HI | GCNGC | 2 cut(s) | 176, 234 |
| Fsp4HI | GCNGC | 2 cut(s) | 176, 234 |
| GluI | GCNGC | 2 cut(s) | 176, 234 |
| GsuI | CTGGAG | 1 cut(s) | 60 |
| HaeIII | GGCC | 1 cut(s) | 51 |
| Hin1II | CATG | 3 cut(s) | 283, 288, 310 |
| HincII | GTYRAC | 1 cut(s) | 267 |
| HindII | GTYRAC | 1 cut(s) | 267 |
| HindIII | AAGCTT | 1 cut(s) | 9 |
| Hpy166II | GTNNAC | 1 cut(s) | 267 |
| Hpy188I | TCNGA | 1 cut(s) | 172 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 299 |
| Hpy8I | GTNNAC | 1 cut(s) | 267 |
| HpyAV | CCTTC | 1 cut(s) | 116 |
| HpyCH4V | TGCA | 3 cut(s) | 102, 279, 325 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 233 |
| HpyF3I | CTNAG | 2 cut(s) | 169, 270 |
| Hsp92II | CATG | 3 cut(s) | 283, 288, 310 |
| Kzo9I | GATC | 2 cut(s) | 66, 292 |
| LmnI | GCTCC | 1 cut(s) | 350 |
| LpnPI | CCDG | 6 cut(s) | 90, 236, 237, 243, 296, 339 |
| Lsp1109I | GCAGC | 2 cut(s) | 162, 245 |
| MalI | GATC | 2 cut(s) | 68, 294 |
| MboI | GATC | 2 cut(s) | 66, 292 |
| MflI | RGATCY | 1 cut(s) | 66 |
| MlsI | TGGCCA | 1 cut(s) | 51 |
| MluCI | AATT | 2 cut(s) | 181, 260 |
| MluNI | TGGCCA | 1 cut(s) | 51 |
| MnlI | CCTC | 6 cut(s) | 94, 98, 107, 222, 265, 341 |
| Mox20I | TGGCCA | 1 cut(s) | 51 |
| MscI | TGGCCA | 1 cut(s) | 51 |
| MseI | TTAA | 1 cut(s) | 138 |
| MslI | CAYNNNNRTG | 1 cut(s) | 311 |
| Msp20I | TGGCCA | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 233 |
| NdeII | GATC | 2 cut(s) | 66, 292 |
| NlaIII | CATG | 3 cut(s) | 283, 288, 310 |
| NspI | RCATGY | 1 cut(s) | 288 |
| PkrI | GCNGC | 2 cut(s) | 177, 235 |
| PsuI | RGATCY | 1 cut(s) | 66 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| RseI | CAYNNNNRTG | 1 cut(s) | 311 |
| SaqAI | TTAA | 1 cut(s) | 138 |
| SatI | GCNGC | 2 cut(s) | 176, 234 |
| Sau3AI | GATC | 2 cut(s) | 66, 292 |
| SetI | ASST | 6 cut(s) | 13, 59, 86, 108, 177, 214 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 311 |
| Sse9I | AATT | 2 cut(s) | 181, 260 |
| SsiI | CCGC | 1 cut(s) | 112 |
| TasI | AATT | 2 cut(s) | 181, 260 |
| Tru1I | TTAA | 1 cut(s) | 138 |
| Tru9I | TTAA | 1 cut(s) | 138 |
| TscAI | CASTG | 1 cut(s) | 374 |
| TseI | GCWGC | 2 cut(s) | 175, 233 |
| TspRI | CASTG | 1 cut(s) | 374 |
| XapI | RAATTY | 1 cut(s) | 181 |
| XceI | RCATGY | 1 cut(s) | 288 |