RchiOBHm_Chr6g0275041

pre-mRNA-processing factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000856
Physical Location & Seq
Reverse (-)
36647877 .. 36649160
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24673

Sequence Viewer

Length: 1284 bp
ATGGACTCGAGGAGAAAGGATAGGAGAGAGGCTAGGTTGAAACAAGAGATTGAGAAGTACAGAGTTTCGAATCCGAAAATCACAAAGCAGTTTGCGAATCTCAAGAGGCAGCTGTATACAGTTACGGCTGAGGAATGCGATCGCATACCGGACATTGGGGATTACTCAGCCAAGAATAAGAAGAGGAAGTTTGAGAGCTTTGTGCCGGTGCCAGATACTTTCTTCGAGAAGGCTAGGCAGGAACAAGAGCATGTTACTGCATTGGACCCCAAGAGTAGGGCCGCGACTGGTACAGAGACGCCGTGGTCGCAAACGCCGGTTACATATTTGACTGCAGTGGGGGATGGTAGAAGTACTGTGTTGTCTTTGAAGTTAGATATGCTTTCGGATTCTGTTTCTGGGTTGATAGTTATGGACCCTAAGGGATATCTCACTAATCTTAAGAGTATGAAGATCACCAGTGATGCGGAGATTTCAGATATAAAGAAGACTAGATTGTTGTTAAAGAGTGTGACACAGACTAATCTGAAGCATCCACCTGGTTGGATTGTAGCTGCGAGGTTGGAGGAAGTGGCAGGGAAGATTCAGGTAGCAAGGCAATTGATCCAGAAAGGGTGTGAGGAATGTCCCAAGAGTGAGGATGTGTGGTTGGAGGCATGTAGGCTTGCCAGTCCTGATGGAACCAAGGCTGTGGTTGTTGCTAGAGTCAAGTCGATACCCAATTCAGTCAAGCTGTGGATGCAGGCGGCGAAATTAGAGCATGATGACTCGAATAAGAGTAGGGTGTTGAGGAAAGGGTTGGAACACATTCCTGATTCTATTAGGCTGTGGAAGGCGATGGTGGAGCTGGCAAATGAGGAGGATGCCAGACTTTTGCTTCAAAGGGCTGTGGAGTGTTGTCCCTTGCACATTGAGTTGTGGCTTGCACTAGCGAGATTGGAAACTTATGAAAATGCCAGGAAGGTCCTTAACAAGGCCCGCGAGAAGCTTTCGAAGGAGCCTGCCATTTGTATTACTGCAGCAAAGTTGGAAAAAGCTAATGGGAACACATCAACAGTTAGGAAGATTATTGAAAAGAGTATAAGGGCTTTGCAAAGAGAGGGGTTGGTGATTGATAGAGAAGCATGGATGAAGGAGGCTGAAGCTGCCGAGCGAGCAGGGTCTGTGGCAACTTGCCAAGCCATTATTCGGAACACAATTGGGATTGGTGTGGAGGAAGAAGATAGGAAGAAGACATGGGTTGCTGATGCAGAGGAGTGCAAGAAACGTGGTTCCATTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000244 GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005684 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006403 GO:0006725 GO:0006807 GO:0006950 GO:0007275 GO:0008134 GO:0008150 GO:0008152 GO:0008380 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0015030 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031047 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034622 GO:0034641 GO:0035257 GO:0035258 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044728 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046540 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051252 GO:0051254 GO:0051427 GO:0060147 GO:0060148 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065003 GO:0065007 GO:0070013 GO:0070920 GO:0071005 GO:0071011 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090351 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:0140110 GO:1901360 GO:1901363 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1903798 GO:1903800 GO:1990904 GO:2000112 GO:2000628 GO:2000630 GO:2000634 GO:2000636 GO:2000637 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
PRP1_N TPR_14 TPR_16 TPR_19 TPR_8 ubiquitin

Protein Analysis

427

Amino Acids

48.14

Weight (kDa)

9.19

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PRP1_N PF06424 1 - 58 4.3e-15 PRP1 splicing factor, N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 304
AccB1I GGYRCC 1 cut(s) 208
AccI GTMKAC 1 cut(s) 116
AccII CGCG 2 cut(s) 284, 981
AciI CCGC 4 cut(s) 282, 467, 746, 979
AclWI GGATC 1 cut(s) 598
AcuI CTGAAG 2 cut(s) 548, 1161
AcyI GRCGYC 1 cut(s) 299
AfaI GTAC 3 cut(s) 59, 292, 355
AfiI CCNNNNNNNGG 4 cut(s) 155, 276, 973, 1188
AflII CTTAAG 1 cut(s) 440
AgsI TTSAA 5 cut(s) 40, 370, 881, 1073, 1280
AjnI CCWGG 2 cut(s) 538, 956
AjuI GAANNNNNNNTTGG 2 cut(s) 1170, 1202
AluBI AGCT 8 cut(s) 112, 198, 554, 733, 847, 988, 1037, 1145
AluI AGCT 8 cut(s) 112, 198, 554, 733, 847, 988, 1037, 1145
Alw26I GTCTC 1 cut(s) 290
AlwI GGATC 1 cut(s) 598
AlwNI CAGNNNCTG 1 cut(s) 1163
Ama87I CYCGRG 1 cut(s) 7
AoxI GGCC 2 cut(s) 279, 975
ApeKI GCWGC 4 cut(s) 109, 554, 1019, 1145
AsiSI GCGATCGC 1 cut(s) 142
Asp700I GAANNNNTTC 1 cut(s) 807
AspS9I GGNCC 5 cut(s) 265, 279, 415, 964, 976
AsuHPI GGTGA 2 cut(s) 448, 1120
AsuII TTCGAA 2 cut(s) 68, 992
AvaI CYCGRG 1 cut(s) 7
AvaII GGWCC 3 cut(s) 265, 415, 964
AxyI CCTNAGG 1 cut(s) 420
BanI GGYRCC 1 cut(s) 208
BbsI GAAGAC 2 cut(s) 494, 1238
BbvCI CCTCAGC 1 cut(s) 129
BbvI GCAGC 4 cut(s) 121, 541, 1031, 1132
BccI CCATC 3 cut(s) 338, 671, 832
BceAI ACGGC 2 cut(s) 141, 286
BciT130I CCWGG 2 cut(s) 540, 958
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 5 cut(s) 33, 234, 492, 702, 929
BfmI CTRYAG 2 cut(s) 333, 1017
BfrI CTTAAG 1 cut(s) 440
BisI GCNGC 6 cut(s) 110, 282, 555, 747, 1020, 1146
BlsI GCNGC 6 cut(s) 111, 283, 556, 748, 1021, 1147
BmcAI AGTACT 1 cut(s) 355
Bme1390I CCNGG 2 cut(s) 540, 958
Bme18I GGWCC 3 cut(s) 265, 415, 964
BmeT110I CYCGRG 1 cut(s) 7
BmgT120I GGNCC 5 cut(s) 265, 279, 415, 964, 976
BmiI GGNNCC 6 cut(s) 210, 267, 417, 682, 999, 1273
BmrFI CCNGG 2 cut(s) 540, 958
BmsI GCATC 5 cut(s) 454, 541, 729, 853, 1237
BpiI GAAGAC 2 cut(s) 494, 1238
Bpu10I CCTNAGC 1 cut(s) 129
Bpu14I TTCGAA 2 cut(s) 68, 992
BpuEI CTTGAG 1 cut(s) 86
BsaHI GRCGYC 1 cut(s) 299
BsaJI CCNNGG 2 cut(s) 302, 684
BsaWI WCCGGW 1 cut(s) 148
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 276, 973, 1188
Bse118I RCCGGY 2 cut(s) 205, 316
Bse1I ACTGG 3 cut(s) 292, 459, 669
Bse21I CCTNAGG 1 cut(s) 420
BseBI CCWGG 2 cut(s) 540, 958
BseDI CCNNGG 2 cut(s) 302, 684
BseGI GGATG 6 cut(s) 349, 532, 646, 744, 868, 1134
BseLI CCNNNNNNNGG 4 cut(s) 155, 276, 973, 1188
BseMII CTCAG 2 cut(s) 120, 180
BseNI ACTGG 3 cut(s) 292, 459, 669
BseRI GAGGAG 3 cut(s) 25, 872, 1268
BseXI GCAGC 4 cut(s) 121, 541, 1031, 1132
Bsh1236I CGCG 2 cut(s) 284, 981
Bsh1285I CGRYCG 1 cut(s) 142
BshFI GGCC 2 cut(s) 281, 977
BshNI GGYRCC 1 cut(s) 208
BsiEI CGRYCG 1 cut(s) 142
BsiHKCI CYCGRG 1 cut(s) 7
BsiSI CCGG 3 cut(s) 149, 206, 317
BslFI GGGAC 2 cut(s) 612, 885
BslI CCNNNNNNNGG 4 cut(s) 155, 276, 973, 1188
BsmAI GTCTC 1 cut(s) 290
BsmBI CGTCTC 1 cut(s) 290
BsmFI GGGAC 2 cut(s) 612, 885
BsmI GAATGC 1 cut(s) 140
BsnI GGCC 2 cut(s) 281, 977
BsoBI CYCGRG 1 cut(s) 7
Bsp119I TTCGAA 2 cut(s) 68, 992
Bsp143I GATC 3 cut(s) 139, 453, 603
BspACI CCGC 4 cut(s) 282, 467, 746, 979
BspANI GGCC 2 cut(s) 281, 977
BspCNI CTCAG 2 cut(s) 121, 179
BspFNI CGCG 2 cut(s) 284, 981
BspLI GGNNCC 6 cut(s) 210, 267, 417, 682, 999, 1273
BspMAI CTGCAG 2 cut(s) 337, 1021
BspPI GGATC 1 cut(s) 598
BspT104I TTCGAA 2 cut(s) 68, 992
BspT107I GGYRCC 1 cut(s) 208
BspTI CTTAAG 1 cut(s) 440
BsrFI RCCGGY 2 cut(s) 205, 316
BsrI ACTGG 3 cut(s) 292, 459, 669
BssAI RCCGGY 2 cut(s) 205, 316
BssECI CCNNGG 2 cut(s) 302, 684
BssMI GATC 3 cut(s) 139, 453, 603
BssNAI GTATAC 1 cut(s) 117
BssNI GRCGYC 1 cut(s) 299
BssT1I CCWWGG 1 cut(s) 684
Bst1107I GTATAC 1 cut(s) 117
Bst2UI CCWGG 2 cut(s) 540, 958
Bst4CI ACNGT 3 cut(s) 121, 358, 1057
Bst6I CTCTTC 1 cut(s) 176
BstACI GRCGYC 1 cut(s) 299
BstAFI CTTAAG 1 cut(s) 440
BstBI TTCGAA 2 cut(s) 68, 992
BstC8I GCNNGC 7 cut(s) 666, 744, 849, 924, 979, 1002, 1155
BstDEI CTNAG 3 cut(s) 129, 166, 420
BstDSI CCRYGG 1 cut(s) 302
BstENI CCTNNNNNAGG 1 cut(s) 971
BstF5I GGATG 6 cut(s) 349, 532, 646, 744, 868, 1134
BstFNI CGCG 2 cut(s) 284, 981
BstKTI GATC 3 cut(s) 142, 456, 606
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 3 cut(s) 139, 453, 603
BstMCI CGRYCG 1 cut(s) 142
BstMWI GCNNNNNNNGC 4 cut(s) 307, 739, 1145, 1154
BstNI CCWGG 2 cut(s) 540, 958
BstNSI RCATGY 2 cut(s) 254, 660
BstSCI CCNGG 2 cut(s) 538, 956
BstSFI CTRYAG 2 cut(s) 333, 1017
BstUI CGCG 2 cut(s) 284, 981
BstV1I GCAGC 4 cut(s) 121, 541, 1031, 1132
BstV2I GAAGAC 2 cut(s) 494, 1238
BstXI CCANNNNNNTGG 2 cut(s) 543, 691
BstZ17I GTATAC 1 cut(s) 117
Bsu36I CCTNAGG 1 cut(s) 420
BsuRI GGCC 2 cut(s) 281, 977
BtgI CCRYGG 1 cut(s) 302
BtgZI GCGATG 1 cut(s) 851
BtsCI GGATG 6 cut(s) 349, 532, 646, 744, 868, 1134
BtsI GCAGTG 1 cut(s) 342
BtsIMutI CAGTG 2 cut(s) 342, 466
Cac8I GCNNGC 7 cut(s) 666, 744, 849, 924, 979, 1002, 1155
CaiI CAGNNNCTG 1 cut(s) 1163
Cfr10I RCCGGY 2 cut(s) 205, 316
Cfr13I GGNCC 5 cut(s) 265, 279, 415, 964, 976
CseI GACGC 1 cut(s) 307
CsiI ACCWGGT 1 cut(s) 538
Csp6I GTAC 3 cut(s) 58, 291, 354
CspCI CAANNNNNGTGG 2 cut(s) 1249, 1284
CviAII CATG 5 cut(s) 251, 657, 761, 1125, 1236
CviQI GTAC 3 cut(s) 58, 291, 354
DdeI CTNAG 3 cut(s) 129, 166, 420
DpnI GATC 3 cut(s) 141, 455, 605
DpnII GATC 3 cut(s) 139, 453, 603
DrdI GACNNNNNNGTC 1 cut(s) 304
DseDI GACNNNNNNGTC 1 cut(s) 304
Eam1104I CTCTTC 1 cut(s) 176
EarI CTCTTC 1 cut(s) 176
Eco130I CCWWGG 1 cut(s) 684
Eco32I GATATC 1 cut(s) 428
Eco47I GGWCC 3 cut(s) 265, 415, 964
Eco57I CTGAAG 2 cut(s) 548, 1161
Eco81I CCTNAGG 1 cut(s) 420
Eco88I CYCGRG 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 971
EcoO109I RGGNCCY 1 cut(s) 964
EcoRII CCWGG 2 cut(s) 538, 956
EcoRV GATATC 1 cut(s) 428
EcoT14I CCWWGG 1 cut(s) 684
ErhI CCWWGG 1 cut(s) 684
Esp3I CGTCTC 1 cut(s) 290
FaeI CATG 5 cut(s) 254, 660, 764, 1128, 1239
FaqI GGGAC 2 cut(s) 612, 885
FatI CATG 5 cut(s) 250, 656, 760, 1124, 1235
FauI CCCGC 1 cut(s) 986
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 6 cut(s) 110, 282, 555, 747, 1020, 1146
FokI GGATG 6 cut(s) 356, 519, 653, 751, 875, 1141
Fsp4HI GCNGC 6 cut(s) 110, 282, 555, 747, 1020, 1146
FspBI CTAG 5 cut(s) 33, 234, 492, 702, 929
GluI GCNGC 6 cut(s) 110, 282, 555, 747, 1020, 1146
HaeIII GGCC 2 cut(s) 281, 977
HapII CCGG 3 cut(s) 149, 206, 317
HgaI GACGC 1 cut(s) 307
Hin1I GRCGYC 1 cut(s) 299
Hin1II CATG 5 cut(s) 254, 660, 764, 1128, 1239
HindIII AAGCTT 1 cut(s) 986
HinfI GANTC 8 cut(s) 5, 70, 97, 389, 583, 705, 767, 815
HpaII CCGG 3 cut(s) 149, 206, 317
HphI GGTGA 2 cut(s) 448, 1120
Hpy166II GTNNAC 1 cut(s) 117
Hpy188I TCNGA 5 cut(s) 75, 388, 478, 528, 1191
Hpy188III TCNNGA 5 cut(s) 103, 226, 607, 674, 812
Hpy8I GTNNAC 1 cut(s) 117
HpyAV CCTTC 5 cut(s) 223, 826, 955, 988, 1126
HpyCH4III ACNGT 3 cut(s) 121, 358, 1057
HpyCH4IV ACGT 1 cut(s) 1267
HpyCH4V TGCA 9 cut(s) 260, 335, 742, 907, 926, 1019, 1093, 1250, 1260
HpyF10VI GCNNNNNNNGC 4 cut(s) 307, 739, 1145, 1154
HpyF3I CTNAG 3 cut(s) 129, 166, 420
HpySE526I ACGT 1 cut(s) 1267
Hsp92I GRCGYC 1 cut(s) 299
Hsp92II CATG 5 cut(s) 254, 660, 764, 1128, 1239
Kzo9I GATC 3 cut(s) 139, 453, 603
LmnI GCTCC 2 cut(s) 844, 997
Lsp1109I GCAGC 4 cut(s) 121, 541, 1031, 1132
LweI GCATC 5 cut(s) 454, 541, 729, 853, 1237
MabI ACCWGGT 1 cut(s) 538
MaeI CTAG 5 cut(s) 33, 234, 492, 702, 929
MaeII ACGT 1 cut(s) 1267
MaeIII GTNAC 4 cut(s) 121, 253, 319, 511
MalI GATC 3 cut(s) 141, 455, 605
MboI GATC 3 cut(s) 139, 453, 603
MfeI CAATTG 2 cut(s) 599, 1197
MluCI AATT 4 cut(s) 599, 721, 752, 1197
MlyI GAGTC 2 cut(s) 714, 761
MmeI TCCRAC 5 cut(s) 524, 543, 630, 780, 1008
MroXI GAANNNNTTC 1 cut(s) 807
MseI TTAA 3 cut(s) 441, 503, 969
MspA1I CMGCKG 1 cut(s) 112
MspCI CTTAAG 1 cut(s) 440
MspI CCGG 3 cut(s) 149, 206, 317
MspR9I CCNGG 2 cut(s) 540, 958
MunI CAATTG 2 cut(s) 599, 1197
Mva1269I GAATGC 1 cut(s) 140
MvaI CCWGG 2 cut(s) 540, 958
MvnI CGCG 2 cut(s) 284, 981
MwoI GCNNNNNNNGC 4 cut(s) 307, 739, 1145, 1154
NdeII GATC 3 cut(s) 139, 453, 603
NlaIII CATG 5 cut(s) 254, 660, 764, 1128, 1239
NlaIV GGNNCC 6 cut(s) 210, 267, 417, 682, 999, 1273
NmeAIII GCCGAG 1 cut(s) 1174
NmuCI GTSAC 1 cut(s) 511
NspI RCATGY 2 cut(s) 254, 660
NspV TTCGAA 2 cut(s) 68, 992
PaeR7I CTCGAG 1 cut(s) 7
PctI GAATGC 1 cut(s) 140
PdmI GAANNNNTTC 1 cut(s) 807
PfeI GAWTC 5 cut(s) 70, 97, 389, 583, 815
PkrI GCNGC 6 cut(s) 111, 283, 556, 748, 1021, 1147
Ple19I CGATCG 1 cut(s) 142
PleI GAGTC 2 cut(s) 713, 761
PpsI GAGTC 2 cut(s) 713, 761
PpuMI RGGWCCY 1 cut(s) 964
Psp5II RGGWCCY 1 cut(s) 964
Psp6I CCWGG 2 cut(s) 538, 956
PspGI CCWGG 2 cut(s) 538, 956
PspN4I GGNNCC 6 cut(s) 210, 267, 417, 682, 999, 1273
PspPI GGNCC 5 cut(s) 265, 279, 415, 964, 976
PspPPI RGGWCCY 1 cut(s) 964
PspXI VCTCGAGB 1 cut(s) 7
PstI CTGCAG 2 cut(s) 337, 1021
PstNI CAGNNNCTG 1 cut(s) 1163
PvuI CGATCG 1 cut(s) 142
PvuII CAGCTG 1 cut(s) 112
RgaI GCGATCGC 1 cut(s) 142
RsaI GTAC 3 cut(s) 59, 292, 355
RsaNI GTAC 3 cut(s) 58, 291, 354
SaqAI TTAA 3 cut(s) 441, 503, 969
SatI GCNGC 6 cut(s) 110, 282, 555, 747, 1020, 1146
Sau3AI GATC 3 cut(s) 139, 453, 603
Sau96I GGNCC 5 cut(s) 265, 279, 415, 964, 976
ScaI AGTACT 1 cut(s) 355
SchI GAGTC 2 cut(s) 714, 761
ScrFI CCNGG 2 cut(s) 540, 958
SexAI ACCWGGT 1 cut(s) 538
SfaAI GCGATCGC 1 cut(s) 142
SfaNI GCATC 5 cut(s) 454, 541, 729, 853, 1237
SfcI CTRYAG 2 cut(s) 333, 1017
Sfr274I CTCGAG 1 cut(s) 7
SfuI TTCGAA 2 cut(s) 68, 992
SgfI GCGATCGC 1 cut(s) 142
SinI GGWCC 3 cut(s) 265, 415, 964
SlaI CTCGAG 1 cut(s) 7
SmlI CTYRAG 3 cut(s) 7, 101, 440
SmoI CTYRAG 3 cut(s) 7, 101, 440
Sse9I AATT 4 cut(s) 599, 721, 752, 1197
SsiI CCGC 4 cut(s) 282, 467, 746, 979
SspMI CTAG 5 cut(s) 33, 234, 492, 702, 929
StyD4I CCNGG 2 cut(s) 538, 956
StyI CCWWGG 1 cut(s) 684
TaaI ACNGT 3 cut(s) 121, 358, 1057
TaiI ACGT 1 cut(s) 1270
TaqI TCGA 6 cut(s) 8, 68, 225, 713, 770, 992
TasI AATT 4 cut(s) 599, 721, 752, 1197
TatI WGTACW 2 cut(s) 57, 353
TauI GCSGC 2 cut(s) 284, 749
TfiI GAWTC 5 cut(s) 70, 97, 389, 583, 815
Tru1I TTAA 3 cut(s) 441, 503, 969
Tru9I TTAA 3 cut(s) 441, 503, 969
TscAI CASTG 2 cut(s) 342, 466
TseFI GTSAC 1 cut(s) 511
TseI GCWGC 4 cut(s) 109, 554, 1019, 1145
Tsp45I GTSAC 1 cut(s) 511
TspDTI ATGAA 3 cut(s) 464, 963, 1145
TspRI CASTG 2 cut(s) 342, 466
Vha464I CTTAAG 1 cut(s) 440
VpaK11BI GGWCC 3 cut(s) 265, 415, 964
XagI CCTNNNNNAGG 1 cut(s) 971
XceI RCATGY 2 cut(s) 254, 660
XhoI CTCGAG 1 cut(s) 7
XmiI GTMKAC 1 cut(s) 116
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 5 cut(s) 33, 234, 492, 702, 929
ZrmI AGTACT 1 cut(s) 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.