PRP1 splicing factor, N-terminal
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HAT_PRP39_C | PF23241 | 81 - 162 | 9.5e-07 | PRP39 C-terminal HAT repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 189, 240 |
| AcsI | RAATTY | 2 cut(s) | 100, 505 |
| AgsI | TTSAA | 5 cut(s) | 308, 410, 467, 584, 608 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 564, 596 |
| AluBI | AGCT | 3 cut(s) | 176, 481, 533 |
| AluI | AGCT | 3 cut(s) | 176, 481, 533 |
| AlwI | GGATC | 2 cut(s) | 189, 240 |
| ApeKI | GCWGC | 2 cut(s) | 347, 413 |
| ApoI | RAATTY | 2 cut(s) | 100, 505 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 198 |
| AsuHPI | GGTGA | 1 cut(s) | 514 |
| BbvI | GCAGC | 2 cut(s) | 334, 425 |
| BccI | CCATC | 1 cut(s) | 223 |
| BfaI | CTAG | 1 cut(s) | 372 |
| BisI | GCNGC | 2 cut(s) | 348, 414 |
| BlsI | GCNGC | 2 cut(s) | 349, 415 |
| BmsI | GCATC | 1 cut(s) | 388 |
| BsaJI | CCNNGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 1 cut(s) | 63 |
| BseGI | GGATG | 3 cut(s) | 25, 123, 528 |
| BseXI | GCAGC | 2 cut(s) | 334, 425 |
| BseYI | CCCAGC | 2 cut(s) | 53, 551 |
| Bsp143I | GATC | 2 cut(s) | 181, 232 |
| BspHI | TCATGA | 1 cut(s) | 241 |
| BspPI | GGATC | 2 cut(s) | 189, 240 |
| BssECI | CCNNGG | 1 cut(s) | 63 |
| BssMI | GATC | 2 cut(s) | 181, 232 |
| BssT1I | CCWWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 1 cut(s) | 590 |
| BstC8I | GCNNGC | 4 cut(s) | 37, 41, 396, 549 |
| BstDEI | CTNAG | 1 cut(s) | 447 |
| BstF5I | GGATG | 3 cut(s) | 25, 123, 528 |
| BstKTI | GATC | 2 cut(s) | 184, 235 |
| BstMBI | GATC | 2 cut(s) | 181, 232 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 553 |
| BstNSI | RCATGY | 2 cut(s) | 39, 560 |
| BstV1I | GCAGC | 2 cut(s) | 334, 425 |
| BstX2I | RGATCY | 1 cut(s) | 232 |
| BstYI | RGATCY | 1 cut(s) | 232 |
| BtsCI | GGATG | 3 cut(s) | 25, 123, 528 |
| BtsI | GCAGTG | 2 cut(s) | 231, 288 |
| BtsIMutI | CAGTG | 3 cut(s) | 231, 288, 595 |
| Cac8I | GCNNGC | 4 cut(s) | 37, 41, 396, 549 |
| CciI | TCATGA | 1 cut(s) | 241 |
| CviAII | CATG | 5 cut(s) | 36, 140, 242, 519, 557 |
| DdeI | CTNAG | 1 cut(s) | 447 |
| DpnI | GATC | 2 cut(s) | 183, 234 |
| DpnII | GATC | 2 cut(s) | 181, 232 |
| Eco130I | CCWWGG | 1 cut(s) | 63 |
| EcoRI | GAATTC | 1 cut(s) | 100 |
| EcoT14I | CCWWGG | 1 cut(s) | 63 |
| ErhI | CCWWGG | 1 cut(s) | 63 |
| FaeI | CATG | 5 cut(s) | 39, 143, 245, 522, 560 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 255, 287 |
| FatI | CATG | 5 cut(s) | 35, 139, 241, 518, 556 |
| Fnu4HI | GCNGC | 2 cut(s) | 348, 414 |
| FokI | GGATG | 3 cut(s) | 32, 130, 535 |
| Fsp4HI | GCNGC | 2 cut(s) | 348, 414 |
| FspBI | CTAG | 1 cut(s) | 372 |
| GluI | GCNGC | 2 cut(s) | 348, 414 |
| GsaI | CCCAGC | 2 cut(s) | 57, 555 |
| Hin1II | CATG | 5 cut(s) | 39, 143, 245, 522, 560 |
| HindIII | AAGCTT | 2 cut(s) | 174, 479 |
| HinfI | GANTC | 1 cut(s) | 358 |
| HphI | GGTGA | 1 cut(s) | 514 |
| Hpy166II | GTNNAC | 1 cut(s) | 109 |
| Hpy188I | TCNGA | 4 cut(s) | 9, 334, 387, 512 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| Hpy8I | GTNNAC | 1 cut(s) | 109 |
| HpyAV | CCTTC | 3 cut(s) | 154, 214, 520 |
| HpyCH4III | ACNGT | 1 cut(s) | 590 |
| HpyCH4V | TGCA | 3 cut(s) | 39, 379, 487 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 553 |
| HpyF3I | CTNAG | 1 cut(s) | 447 |
| Hsp92II | CATG | 5 cut(s) | 39, 143, 245, 522, 560 |
| Kzo9I | GATC | 2 cut(s) | 181, 232 |
| LmnI | GCTCC | 1 cut(s) | 136 |
| LpnPI | CCDG | 4 cut(s) | 25, 67, 473, 537 |
| Lsp1109I | GCAGC | 2 cut(s) | 334, 425 |
| LweI | GCATC | 1 cut(s) | 388 |
| MaeI | CTAG | 1 cut(s) | 372 |
| MalI | GATC | 2 cut(s) | 183, 234 |
| MboI | GATC | 2 cut(s) | 181, 232 |
| MboII | GAAGA | 7 cut(s) | 22, 169, 191, 257, 374, 437, 469 |
| MflI | RGATCY | 1 cut(s) | 232 |
| MluCI | AATT | 3 cut(s) | 100, 308, 505 |
| MmeI | TCCRAC | 2 cut(s) | 279, 402 |
| MnlI | CCTC | 7 cut(s) | 10, 25, 114, 280, 295, 321, 337 |
| MroXI | GAANNNNTTC | 1 cut(s) | 198 |
| MseI | TTAA | 1 cut(s) | 363 |
| MslI | CAYNNNNRTG | 1 cut(s) | 246 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 553 |
| NdeII | GATC | 2 cut(s) | 181, 232 |
| NlaIII | CATG | 5 cut(s) | 39, 143, 245, 522, 560 |
| NspI | RCATGY | 2 cut(s) | 39, 560 |
| PaeI | GCATGC | 1 cut(s) | 39 |
| PagI | TCATGA | 1 cut(s) | 241 |
| PdmI | GAANNNNTTC | 1 cut(s) | 198 |
| PfeI | GAWTC | 1 cut(s) | 358 |
| PkrI | GCNGC | 2 cut(s) | 349, 415 |
| PspFI | CCCAGC | 2 cut(s) | 53, 551 |
| PsuI | RGATCY | 1 cut(s) | 232 |
| RseI | CAYNNNNRTG | 1 cut(s) | 246 |
| SaqAI | TTAA | 1 cut(s) | 363 |
| SatI | GCNGC | 2 cut(s) | 348, 414 |
| Sau3AI | GATC | 2 cut(s) | 181, 232 |
| SfaNI | GCATC | 1 cut(s) | 388 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 246 |
| SphI | GCATGC | 1 cut(s) | 39 |
| Sse9I | AATT | 3 cut(s) | 100, 308, 505 |
| SspMI | CTAG | 1 cut(s) | 372 |
| StyI | CCWWGG | 1 cut(s) | 63 |
| TaaI | ACNGT | 1 cut(s) | 590 |
| TaqI | TCGA | 1 cut(s) | 149 |
| TasI | AATT | 3 cut(s) | 100, 308, 505 |
| TfiI | GAWTC | 1 cut(s) | 358 |
| Tru1I | TTAA | 1 cut(s) | 363 |
| Tru9I | TTAA | 1 cut(s) | 363 |
| TscAI | CASTG | 3 cut(s) | 231, 288, 595 |
| TseI | GCWGC | 2 cut(s) | 347, 413 |
| TspDTI | ATGAA | 5 cut(s) | 207, 258, 263, 275, 539 |
| TspGWI | ACGGA | 1 cut(s) | 285 |
| TspRI | CASTG | 3 cut(s) | 231, 288, 595 |
| XapI | RAATTY | 2 cut(s) | 100, 505 |
| XceI | RCATGY | 2 cut(s) | 39, 560 |
| XmnI | GAANNNNTTC | 1 cut(s) | 198 |
| XspI | CTAG | 1 cut(s) | 372 |