Gene Detail - Rorug05G0264700

Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000856

Physical Location & Seq

Genomic Coordinates Reverse (-)

29996489 .. 29996560

Gene Structure 72 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 22 bp

Sequence not available

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000244 GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005684 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006403 GO:0006725 GO:0006807 GO:0006950 GO:0007275 GO:0008134 GO:0008150 GO:0008152 GO:0008380 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0015030 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031047 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034622 GO:0034641 GO:0035257 GO:0035258 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044728 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046540 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051252 GO:0051254 GO:0051427 GO:0060147 GO:0060148 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065003 GO:0065007 GO:0070013 GO:0070920 GO:0071005 GO:0071011 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090351 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:0140110 GO:1901360 GO:1901363 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1903798 GO:1903800 GO:1990904 GO:2000112 GO:2000628 GO:2000630 GO:2000634 GO:2000636 GO:2000637 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP1_N TPR_14 TPR_16 TPR_19 TPR_8 ubiquitin

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000856)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03430 AT4G03430 AT4G03430
fragaria_vesca	FvH4_2g13420 FvH4_5g31520
malus_domestica	MD09G1251900.v1.1 MD17G1244100.v1.1
prunus_persica	Prupe.2G325100_v2.0.a1 Prupe.2G325100_v2.0.a1 Prupe.2G325100_v2.0.a1 Prupe.2G325100_v2.0.a1 Prupe.3G157000_v2.0.a1 Prupe.3G207300_v2.0.a1 Prupe.8G033800_v2.0.a1 Prupe.8G033800_v2.0.a1 Prupe.8G033800_v2.0.a1 Prupe.8G033800_v2.0.a1
pyrus_communis	pycom09g16820 pycom17g24700
rosa_chinensis	RchiOBHm_Chr3g0494631 RchiOBHm_Chr3g0494641 RchiOBHm_Chr5g0050851 RchiOBHm_Chr6g0275031 RchiOBHm_Chr6g0275041 RchiOBHm_Chr7g0226921
rosa_laevigata	RLG00000001682 RLG00000013503
rosa_multiflora	Rmu_sc0000181.1_g000002 Rmu_sc0000356.1_g000010 Rmu_sc0002032.1_g000003 Rmu_sc0002032.1_g000005 Rmu_sc0002032.1_g000006 Rmu_sc0002762.1_g000009 Rmu_sc0003080.1_g000020 Rmu_sc0003080.1_g000021 Rmu_sc0037591.1_g000001 Rmu_sc0040731.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029850
rosa_rugosa	Rorug03G0266300 Rorug03G0266400 Rorug05G0264700.1 Rorug07G0240400
rosa_samantha	Rh3CG348400 Rh3CG348500 Rh3DG351000 Rh3DG351100 Rh5AG336600 Rh5BG346200 Rh5CG373800 Rh5DG359100 Rh6AG201800 Rh6AG201900 Rh6BG205300 Rh6BG205400 Rh6BG255100 Rh6CG206900 Rh6CG207100 Rh6CG207200 Rh6DG197100 Rh6DG197200 Rh7AG388400 Rh7BG374400 Rh7CG407700 Rh7DG386600
rosa_wichuraiana	Rw5G031750 Rw6G017550 Rw7G032580

Restriction Enzyme Sites

1 / 10

No common restriction sites found or sequence not available.