RchiOBHm_Chr7g0243171

spectrin binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000952
Physical Location & Seq
Forward (+)
69502836 .. 69517425
14590 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21793

Sequence Viewer

Length: 1875 bp
ATGGCAAGTACTCCAGTTGGCTCTAATGCACTTATTCTGGAAGTTCTTGACCGTAGTAACTATGAACATTGGAGATCGCGATTGAAATCTTATTTGTTAGCTGAAGATCTCTGGGAGGCTGTCGAAGCAATTGTGGAACCTCCAAAACTTGAAGATGATCAAACTGATTATAAGGCCTGGACCAAAAAGAATGCCAAGGCTTTGTACGCAATCCAAAATACATGCGGGAGAGAGCTGTTCTCTTTTATAAGTAAAATTGAGACAGCCAAAAGTGCCTGGGATGCTTTGGAACAAGAGTGCAAAGTTATGCAAGGATATGATGAGAACAATGCCGACCACTTAGTGCGCTATAAATCGTTCATAGAATCAGTGAGCAGTGGTGATTGGGATAAGGCAAAGAAGTGTCTTGGAGAAGTTGATATGCGTAGTGTAGTAGTAGTAAGGGCAGTAGATGGAGACGAAGAAATAGCTCTTCATGTAGCAGCCAAGGAAGGGCATGTGCACATCGTGAGAAAGTTGGTGCATTTGATGACAGATGAAGATTTAAAAACAAAAACCGCTCGTGGACGTCGCACAGCTCTTCACGTAGCAGCATGGAAGGGGCATGTGCATGTTGTGAAAGAGTTACCGGTGCCGTTGATGGGAGAAGTACAAGACCGGGAAGGTGACACAGCTCTTCATATCGCAGTCCAGGAAGGGAAGGTCGATATTGTTAAAGAGTTGGTGCTGTTGATGAGACAAGAAGACTTGAAAATAAAAAATGATGCTGGTTACACAGCTCTTCACCTAGCAGTTAATAAGGGGAATGTGCCTATGGTCAAAGAGTTCGTGAGAAAAGAAAAAGGTGAGAGTAGTATTGACAACGACAACTTTGAGCATTATATACCGTTTATCACCTGTGTGATAAGTGGTGATTGGGATCAGGCAAATGAGTGTTTAAAAGAACTAGATGATCCATGTGGTGCAGTAACAGCAGTAGATCCAAGAAACAACCTTCGAAATACTGCTCTTCACGTAGCAGCCCAGAAAGGGCATGTGGATGTTACCAAAGGATTGCTGTTGTTGCTGAAAATGAGACAAGAAGATTTGGAATTGAAAACCACTGAGGATTTCACAAATTTTGGTTCTGGTATAACTTTAGGGATCAGTGAAGAATTCCTCATGGAAAGGGCCAAATACATGGTTGAACAGTATGAGAAAACACTTGGCAGCTGTTTGGAGATGCAAAACGCTAAAGGTTTCACAGCTCTTCACCTAGCAATACTGCAGGGGAATGGGAACATCGTGAAAGAGTTGGTACCATTAATGAAAAAAGAAGGTTTAGAAATAAAAGACGCTAATGGAAAGACAGCTCTTAACATCGCAATCTCAAAACGGCATGTGGATATAGCGAAGGAGTTGCTGCAATCGATGAGACCAGAGGCTTTGGAAGAAAAAGACAATCAAGGTTTTACAGCTTTGAGTTTGGCTGTTCAATGTTTCAAGGATGGAGAAGTTTGCGAAATGGCTAAATACATGGCTGAGAAAGATGATAAAGTATTCGGCATACCCTCGCCGGGCGGTGATGATATTCCAGTTGTCAGAGCTTTTCGTGGGGGTAAAAGGAAATTGGCTCGCTCTATCTATTCTGTCACTCCACTTGAAGCTCTCAAGGGACCCAATGGGAGTTTAGTTATTTGCTTATGTCTCGATGCTAGCAACACGATTGATTTGGCATGGCACTTGCTTCAACGTTGTCCAAATTTGGCTTTCACTATCACCAAACCTCCTCAATCTACTCCTATGATGAAATTGGCTCGCATGCATTTTGCATTCTTAAGTGGAACACGACTCACACGTTGGCAGAGATTGCTTTATGATTTAATTAATATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 DUF4219

Protein Analysis

624

Amino Acids

69.85

Weight (kDa)

6.04

Isoelectric Point (pI)

35.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 16 - 42 6.9e-09 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 29 - 99 3.2e-10 gag-polypeptide of LTR copia-type
Ank_2 PF12796 150 - 209 6.9e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 158 - 242 5.2e-14 Ankyrin repeats (3 copies)
Ank_2 PF12796 217 - 278 2.8e-10 Ankyrin repeats (3 copies)
Ank_5 PF13857 218 - 264 2.8e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 407 - 469 4.2e-11 Ankyrin repeats (3 copies)
Ank_5 PF13857 408 - 455 6e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 440 - 509 6.3e-08 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 171, 248
AatII GACGTC 1 cut(s) 571
Acc65I GGTACC 1 cut(s) 1297
AccB1I GGYRCC 2 cut(s) 631, 1297
AccBSI CCGCTC 1 cut(s) 560
AccII CGCG 1 cut(s) 79
AciI CCGC 3 cut(s) 225, 558, 1560
AclI AACGTT 1 cut(s) 1732
AclWI GGATC 4 cut(s) 927, 947, 974, 1151
AcsI RAATTY 3 cut(s) 1117, 1154, 1741
AcuI CTGAAG 1 cut(s) 123
AcyI GRCGYC 1 cut(s) 568
AdeI CACNNNGTG 2 cut(s) 343, 508
AfaI GTAC 4 cut(s) 10, 206, 651, 1299
AfiI CCNNNNNNNGG 4 cut(s) 492, 641, 1029, 1556
AflII CTTAAG 1 cut(s) 1816
AflIII ACRYGT 1 cut(s) 1835
AgeI ACCGGT 1 cut(s) 628
AgsI TTSAA 9 cut(s) 85, 152, 751, 1096, 1187, 1475, 1483, 1643, 1730
AjnI CCWGG 3 cut(s) 176, 275, 690
AleI CACNNNNGTG 1 cut(s) 899
Alw21I GWGCWC 1 cut(s) 504
Alw26I GTCTC 6 cut(s) 254, 450, 730, 1069, 1408, 1691
Alw44I GTGCAC 1 cut(s) 500
AlwI GGATC 4 cut(s) 927, 947, 974, 1151
AoxI GGCC 2 cut(s) 174, 1170
ApaLI GTGCAC 1 cut(s) 500
ApeKI GCWGC 5 cut(s) 482, 590, 1019, 1209, 1402
ApoI RAATTY 3 cut(s) 1117, 1154, 1741
AseI ATTAAT 2 cut(s) 1304, 1866
AsiGI ACCGGT 1 cut(s) 628
Asp718I GGTACC 1 cut(s) 1297
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 3 cut(s) 180, 1170, 1655
AsuC2I CCSGG 2 cut(s) 659, 1557
AsuHPI GGTGA 9 cut(s) 392, 677, 776, 857, 886, 923, 1244, 1574, 1750
AsuII TTCGAA 1 cut(s) 997
AsuNHI GCTAGC 1 cut(s) 1694
AvaII GGWCC 2 cut(s) 180, 1655
BaeGI GKGCMC 1 cut(s) 504
BanI GGYRCC 2 cut(s) 631, 1297
BauI CACGAG 1 cut(s) 561
BbsI GAAGAC 1 cut(s) 750
Bbv12I GWGCWC 1 cut(s) 504
BbvI GCAGC 5 cut(s) 494, 602, 1031, 1221, 1389
BccI CCATC 3 cut(s) 446, 634, 1481
BceAI ACGGC 2 cut(s) 619, 1391
BcgI CGANNNNNNTGC 2 cut(s) 1381, 1415
BciT130I CCWGG 3 cut(s) 178, 277, 692
BclI TGATCA 1 cut(s) 157
BcnI CCSGG 2 cut(s) 659, 1557
BcoDI GTCTC 6 cut(s) 254, 450, 730, 1069, 1408, 1691
BfaI CTAG 5 cut(s) 788, 947, 1256, 1695, 1873
BfmI CTRYAG 1 cut(s) 1265
BfrI CTTAAG 1 cut(s) 1816
BglII AGATCT 1 cut(s) 106
BisI GCNGC 5 cut(s) 483, 591, 1020, 1210, 1403
BlsI GCNGC 5 cut(s) 484, 592, 1021, 1211, 1404
BmcAI AGTACT 1 cut(s) 10
Bme1390I CCNGG 5 cut(s) 178, 277, 659, 692, 1557
Bme18I GGWCC 2 cut(s) 180, 1655
BmgT120I GGNCC 3 cut(s) 180, 1170, 1655
BmiI GGNNCC 5 cut(s) 138, 633, 1299, 1656, 1657
BmrFI CCNGG 5 cut(s) 178, 277, 659, 692, 1557
BmsI GCATC 4 cut(s) 271, 754, 1212, 1681
BmtI GCTAGC 1 cut(s) 1698
BpiI GAAGAC 1 cut(s) 750
BplI GAGNNNNNCTC 2 cut(s) 224, 256
Bpu14I TTCGAA 1 cut(s) 997
BpuEI CTTGAG 1 cut(s) 1634
BpuMI CCSGG 2 cut(s) 659, 1557
Bsa29I ATCGAT 1 cut(s) 1409
BsaAI YACGTR 2 cut(s) 586, 1015
BsaBI GATNNNNATC 2 cut(s) 85, 918
BsaHI GRCGYC 1 cut(s) 568
BsaI GGTCTC 1 cut(s) 1408
BsaJI CCNNGG 3 cut(s) 195, 276, 486
BsaWI WCCGGW 1 cut(s) 628
BsaXI ACNNNNNCTCC 2 cut(s) 1750, 1780
Bsc4I CCNNNNNNNGG 4 cut(s) 492, 641, 1029, 1556
Bse118I RCCGGY 1 cut(s) 628
Bse1I ACTGG 2 cut(s) 14, 1574
Bse8I GATNNNNATC 2 cut(s) 85, 918
BseBI CCWGG 3 cut(s) 178, 277, 692
BseCI ATCGAT 1 cut(s) 1409
BseDI CCNNGG 3 cut(s) 195, 276, 486
BseGI GGATG 3 cut(s) 286, 1045, 1492
BseJI GATNNNNATC 2 cut(s) 85, 918
BseLI CCNNNNNNNGG 4 cut(s) 492, 641, 1029, 1556
BseMII CTCAG 2 cut(s) 1095, 1512
BseNI ACTGG 2 cut(s) 14, 1574
BseRI GAGGAG 1 cut(s) 1758
BseSI GKGCMC 1 cut(s) 504
BseXI GCAGC 5 cut(s) 494, 602, 1031, 1221, 1389
BsgI GTGCAG 1 cut(s) 984
Bsh1236I CGCG 1 cut(s) 79
BshFI GGCC 2 cut(s) 176, 1172
BshNI GGYRCC 2 cut(s) 631, 1297
BshTI ACCGGT 1 cut(s) 628
BshVI ATCGAT 1 cut(s) 1409
BsiHKAI GWGCWC 1 cut(s) 504
BsiSI CCGG 3 cut(s) 629, 658, 1556
BslFI GGGAC 1 cut(s) 1668
BslI CCNNNNNNNGG 4 cut(s) 492, 641, 1029, 1556
BsmAI GTCTC 6 cut(s) 254, 450, 730, 1069, 1408, 1691
BsmBI CGTCTC 1 cut(s) 450
BsmFI GGGAC 1 cut(s) 1668
BsmI GAATGC 2 cut(s) 196, 1811
BsnI GGCC 2 cut(s) 176, 1172
Bso31I GGTCTC 1 cut(s) 1408
Bsp119I TTCGAA 1 cut(s) 997
Bsp1286I GDGCHC 1 cut(s) 504
Bsp143I GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
Bsp68I TCGCGA 1 cut(s) 79
BspACI CCGC 3 cut(s) 225, 558, 1560
BspANI GGCC 2 cut(s) 176, 1172
BspCNI CTCAG 2 cut(s) 1096, 1513
BspDI ATCGAT 1 cut(s) 1409
BspFNI CGCG 1 cut(s) 79
BspLI GGNNCC 5 cut(s) 138, 633, 1299, 1656, 1657
BspMAI CTGCAG 1 cut(s) 1269
BspOI GCTAGC 1 cut(s) 1698
BspPI GGATC 4 cut(s) 927, 947, 974, 1151
BspQI GCTCTTC 6 cut(s) 477, 585, 681, 786, 1014, 1254
BspT104I TTCGAA 1 cut(s) 997
BspT107I GGYRCC 2 cut(s) 631, 1297
BspTI CTTAAG 1 cut(s) 1816
BspTNI GGTCTC 1 cut(s) 1408
BsrBI CCGCTC 1 cut(s) 560
BsrFI RCCGGY 1 cut(s) 628
BsrI ACTGG 2 cut(s) 14, 1574
BssAI RCCGGY 1 cut(s) 628
BssECI CCNNGG 3 cut(s) 195, 276, 486
BssMI GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
BssNI GRCGYC 1 cut(s) 568
BssSI CACGAG 1 cut(s) 561
BssT1I CCWWGG 2 cut(s) 195, 486
Bst2BI CACGAG 1 cut(s) 561
Bst2UI CCWGG 3 cut(s) 178, 277, 692
Bst4CI ACNGT 3 cut(s) 53, 888, 1191
Bst6I CTCTTC 6 cut(s) 477, 585, 681, 786, 1014, 1254
BstACI GRCGYC 1 cut(s) 568
BstAFI CTTAAG 1 cut(s) 1816
BstAPI GCANNNNNTGC 1 cut(s) 1849
BstBAI YACGTR 2 cut(s) 586, 1015
BstBI TTCGAA 1 cut(s) 997
BstC8I GCNNGC 4 cut(s) 1615, 1696, 1798, 1802
BstDEI CTNAG 3 cut(s) 340, 1104, 1521
BstF5I GGATG 3 cut(s) 286, 1045, 1492
BstFNI CGCG 1 cut(s) 79
BstHHI GCGC 1 cut(s) 348
BstKTI GATC 7 cut(s) 77, 109, 160, 922, 955, 982, 1146
BstMAI GTCTC 6 cut(s) 254, 450, 730, 1069, 1408, 1691
BstMBI GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
BstMWI GCNNNNNNNGC 7 cut(s) 125, 206, 272, 281, 971, 1063, 1849
BstNI CCWGG 3 cut(s) 178, 277, 692
BstNSI RCATGY 7 cut(s) 225, 500, 608, 614, 1037, 1382, 1804
BstSCI CCNGG 5 cut(s) 176, 275, 657, 690, 1555
BstSFI CTRYAG 1 cut(s) 1265
BstSLI GKGCMC 1 cut(s) 504
BstUI CGCG 1 cut(s) 79
BstV1I GCAGC 5 cut(s) 494, 602, 1031, 1221, 1389
BstV2I GAAGAC 1 cut(s) 750
BstX2I RGATCY 2 cut(s) 106, 979
BstXI CCANNNNNNTGG 1 cut(s) 1180
BstYI RGATCY 2 cut(s) 106, 979
Bsu15I ATCGAT 1 cut(s) 1409
BsuRI GGCC 2 cut(s) 176, 1172
BsuTUI ATCGAT 1 cut(s) 1409
BtgZI GCGATG 1 cut(s) 1345
BtsCI GGATG 3 cut(s) 286, 1045, 1492
BtsI GCAGTG 1 cut(s) 382
BtsIMutI CAGTG 4 cut(s) 375, 382, 1101, 1153
BtuMI TCGCGA 1 cut(s) 79
Cac8I GCNNGC 4 cut(s) 1615, 1696, 1798, 1802
CfoI GCGC 1 cut(s) 348
Cfr10I RCCGGY 1 cut(s) 628
Cfr13I GGNCC 3 cut(s) 180, 1170, 1655
ClaI ATCGAT 1 cut(s) 1409
CseI GACGC 1 cut(s) 1343
Csp6I GTAC 4 cut(s) 9, 205, 650, 1298
CspAI ACCGGT 1 cut(s) 628
CviQI GTAC 4 cut(s) 9, 205, 650, 1298
DdeI CTNAG 3 cut(s) 340, 1104, 1521
DpnI GATC 7 cut(s) 76, 108, 159, 921, 954, 981, 1145
DpnII GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
DraI TTTAAA 2 cut(s) 546, 939
DraIII CACNNNGTG 2 cut(s) 343, 508
Eam1104I CTCTTC 6 cut(s) 477, 585, 681, 786, 1014, 1254
EarI CTCTTC 6 cut(s) 477, 585, 681, 786, 1014, 1254
Eco130I CCWWGG 2 cut(s) 195, 486
Eco147I AGGCCT 1 cut(s) 176
Eco31I GGTCTC 1 cut(s) 1408
Eco47I GGWCC 2 cut(s) 180, 1655
Eco57I CTGAAG 1 cut(s) 123
EcoO109I RGGNCCY 1 cut(s) 1655
EcoRI GAATTC 1 cut(s) 1154
EcoRII CCWGG 3 cut(s) 176, 275, 690
EcoT14I CCWWGG 2 cut(s) 195, 486
EcoT22I ATGCAT 1 cut(s) 1806
ErhI CCWWGG 2 cut(s) 195, 486
Esp3I CGTCTC 1 cut(s) 450
FaqI GGGAC 1 cut(s) 1668
FauI CCCGC 1 cut(s) 218
FbaI TGATCA 1 cut(s) 157
Fnu4HI GCNGC 5 cut(s) 483, 591, 1020, 1210, 1403
FokI GGATG 3 cut(s) 293, 1052, 1499
Fsp4HI GCNGC 5 cut(s) 483, 591, 1020, 1210, 1403
FspBI CTAG 5 cut(s) 788, 947, 1256, 1695, 1873
GlaI GCGC 1 cut(s) 347
GluI GCNGC 5 cut(s) 483, 591, 1020, 1210, 1403
HaeIII GGCC 2 cut(s) 176, 1172
HapII CCGG 3 cut(s) 629, 658, 1556
HgaI GACGC 1 cut(s) 1343
HhaI GCGC 1 cut(s) 348
Hin1I GRCGYC 1 cut(s) 568
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HinfI GANTC 2 cut(s) 365, 1830
HpaII CCGG 3 cut(s) 629, 658, 1556
HphI GGTGA 9 cut(s) 392, 677, 776, 857, 886, 923, 1244, 1574, 1750
Hpy166II GTNNAC 2 cut(s) 502, 566
Hpy188I TCNGA 1 cut(s) 1583
Hpy188III TCNNGA 7 cut(s) 38, 47, 78, 508, 829, 1285, 1688
Hpy8I GTNNAC 2 cut(s) 502, 566
Hpy99I CGWCG 1 cut(s) 573
HpyAV CCTTC 8 cut(s) 485, 592, 656, 689, 694, 1004, 1310, 1387
HpyCH4III ACNGT 3 cut(s) 53, 888, 1191
HpyCH4IV ACGT 5 cut(s) 568, 585, 1014, 1732, 1837
HpyF10VI GCNNNNNNNGC 7 cut(s) 125, 206, 272, 281, 971, 1063, 1849
HpyF3I CTNAG 3 cut(s) 340, 1104, 1521
HpySE526I ACGT 5 cut(s) 568, 585, 1014, 1732, 1837
Hsp92I GRCGYC 1 cut(s) 568
HspAI GCGC 1 cut(s) 346
KflI GGGWCCC 1 cut(s) 1655
KpnI GGTACC 1 cut(s) 1301
Ksp22I TGATCA 1 cut(s) 157
Kzo9I GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
LguI GCTCTTC 6 cut(s) 477, 585, 681, 786, 1014, 1254
Lsp1109I GCAGC 5 cut(s) 494, 602, 1031, 1221, 1389
LweI GCATC 4 cut(s) 271, 754, 1212, 1681
MaeI CTAG 5 cut(s) 788, 947, 1256, 1695, 1873
MaeII ACGT 5 cut(s) 568, 585, 1014, 1732, 1837
MaeIII GTNAC 7 cut(s) 56, 624, 665, 770, 967, 1042, 1630
MalI GATC 7 cut(s) 76, 108, 159, 921, 954, 981, 1145
MbiI CCGCTC 1 cut(s) 560
MboI GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
MfeI CAATTG 1 cut(s) 129
MflI RGATCY 2 cut(s) 106, 979
MhlI GDGCHC 1 cut(s) 504
MluCI AATT 9 cut(s) 129, 255, 1091, 1117, 1154, 1607, 1741, 1790, 1863
MlyI GAGTC 1 cut(s) 1824
MnlI CCTC 8 cut(s) 109, 150, 1099, 1169, 1414, 1561, 1776, 1779
Mph1103I ATGCAT 1 cut(s) 1806
MseI TTAA 9 cut(s) 545, 714, 795, 938, 1304, 1356, 1817, 1862, 1866
MslI CAYNNNNRTG 3 cut(s) 609, 899, 1038
MspA1I CMGCKG 1 cut(s) 1212
MspCI CTTAAG 1 cut(s) 1816
MspI CCGG 3 cut(s) 629, 658, 1556
MspR9I CCNGG 5 cut(s) 178, 277, 659, 692, 1557
MunI CAATTG 1 cut(s) 129
Mva1269I GAATGC 2 cut(s) 196, 1811
MvaI CCWGG 3 cut(s) 178, 277, 692
MvnI CGCG 1 cut(s) 79
MwoI GCNNNNNNNGC 7 cut(s) 125, 206, 272, 281, 971, 1063, 1849
NciI CCSGG 2 cut(s) 659, 1557
NdeII GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
NheI GCTAGC 1 cut(s) 1694
NlaIV GGNNCC 5 cut(s) 138, 633, 1299, 1656, 1657
NmuCI GTSAC 2 cut(s) 665, 1630
NruI TCGCGA 1 cut(s) 79
NsiI ATGCAT 1 cut(s) 1806
NspI RCATGY 7 cut(s) 225, 500, 608, 614, 1037, 1382, 1804
NspV TTCGAA 1 cut(s) 997
OliI CACNNNNGTG 1 cut(s) 899
PacI TTAATTAA 1 cut(s) 1866
PaeI GCATGC 1 cut(s) 1804
PceI AGGCCT 1 cut(s) 176
PciSI GCTCTTC 6 cut(s) 477, 585, 681, 786, 1014, 1254
PcsI WCGNNNNNNNCGW 1 cut(s) 1834
PctI GAATGC 2 cut(s) 196, 1811
PfeI GAWTC 1 cut(s) 365
PfoI TCCNGGA 1 cut(s) 690
PinAI ACCGGT 1 cut(s) 628
PkrI GCNGC 5 cut(s) 484, 592, 1021, 1211, 1404
PleI GAGTC 1 cut(s) 1824
PpsI GAGTC 1 cut(s) 1824
Ppu21I YACGTR 2 cut(s) 586, 1015
PpuMI RGGWCCY 1 cut(s) 1655
PshBI ATTAAT 2 cut(s) 1304, 1866
PsiI TTATAA 2 cut(s) 171, 248
Psp1406I AACGTT 1 cut(s) 1732
Psp5II RGGWCCY 1 cut(s) 1655
Psp6I CCWGG 3 cut(s) 176, 275, 690
PspGI CCWGG 3 cut(s) 176, 275, 690
PspN4I GGNNCC 5 cut(s) 138, 633, 1299, 1656, 1657
PspPI GGNCC 3 cut(s) 180, 1170, 1655
PspPPI RGGWCCY 1 cut(s) 1655
PstI CTGCAG 1 cut(s) 1269
PsuI RGATCY 2 cut(s) 106, 979
PvuII CAGCTG 1 cut(s) 1212
RruI TCGCGA 1 cut(s) 79
RsaI GTAC 4 cut(s) 10, 206, 651, 1299
RsaNI GTAC 4 cut(s) 9, 205, 650, 1298
RseI CAYNNNNRTG 3 cut(s) 609, 899, 1038
SapI GCTCTTC 6 cut(s) 477, 585, 681, 786, 1014, 1254
SaqAI TTAA 9 cut(s) 545, 714, 795, 938, 1304, 1356, 1817, 1862, 1866
SatI GCNGC 5 cut(s) 483, 591, 1020, 1210, 1403
Sau3AI GATC 7 cut(s) 74, 106, 157, 919, 952, 979, 1143
Sau96I GGNCC 3 cut(s) 180, 1170, 1655
ScaI AGTACT 1 cut(s) 10
SchI GAGTC 1 cut(s) 1824
ScrFI CCNGG 5 cut(s) 178, 277, 659, 692, 1557
SduI GDGCHC 1 cut(s) 504
SfaNI GCATC 4 cut(s) 271, 754, 1212, 1681
SfcI CTRYAG 1 cut(s) 1265
SfuI TTCGAA 1 cut(s) 997
SinI GGWCC 2 cut(s) 180, 1655
SmiMI CAYNNNNRTG 3 cut(s) 609, 899, 1038
SmlI CTYRAG 2 cut(s) 1649, 1816
SmoI CTYRAG 2 cut(s) 1649, 1816
SphI GCATGC 1 cut(s) 1804
Sse9I AATT 9 cut(s) 129, 255, 1091, 1117, 1154, 1607, 1741, 1790, 1863
SseBI AGGCCT 1 cut(s) 176
SsiI CCGC 3 cut(s) 225, 558, 1560
SspMI CTAG 5 cut(s) 788, 947, 1256, 1695, 1873
StuI AGGCCT 1 cut(s) 176
StyD4I CCNGG 5 cut(s) 176, 275, 657, 690, 1555
StyI CCWWGG 2 cut(s) 195, 486
TaaI ACNGT 3 cut(s) 53, 888, 1191
TaiI ACGT 5 cut(s) 571, 588, 1017, 1735, 1840
TaqI TCGA 5 cut(s) 123, 705, 997, 1409, 1689
TasI AATT 9 cut(s) 129, 255, 1091, 1117, 1154, 1607, 1741, 1790, 1863
TatI WGTACW 2 cut(s) 8, 649
TfiI GAWTC 1 cut(s) 365
Tru1I TTAA 9 cut(s) 545, 714, 795, 938, 1304, 1356, 1817, 1862, 1866
Tru9I TTAA 9 cut(s) 545, 714, 795, 938, 1304, 1356, 1817, 1862, 1866
TscAI CASTG 4 cut(s) 375, 382, 1108, 1153
TseFI GTSAC 2 cut(s) 665, 1630
TseI GCWGC 5 cut(s) 482, 590, 1019, 1209, 1402
Tsp45I GTSAC 2 cut(s) 665, 1630
TspDTI ATGAA 7 cut(s) 78, 349, 464, 552, 668, 1322, 1802
TspRI CASTG 4 cut(s) 375, 382, 1108, 1153
Vha464I CTTAAG 1 cut(s) 1816
VneI GTGCAC 1 cut(s) 500
VpaK11BI GGWCC 2 cut(s) 180, 1655
VspI ATTAAT 2 cut(s) 1304, 1866
XapI RAATTY 3 cut(s) 1117, 1154, 1741
XceI RCATGY 7 cut(s) 225, 500, 608, 614, 1037, 1382, 1804
XspI CTAG 5 cut(s) 788, 947, 1256, 1695, 1873
ZraI GACGTC 1 cut(s) 569
ZrmI AGTACT 1 cut(s) 10
Zsp2I ATGCAT 1 cut(s) 1806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.