Rh7AG473800

spectrin binding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
65712967 .. 65728141
15175 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG473800.1

Sequence Viewer

Length: 3372 bp
ATGGAAAGTATTCAAGTTGGCTCTAATGCACTTATTTTGGAAGTTCTTAACCGCGATAACTATAAACATTGGAGTTCGCGGTTAGAAACTTATTTGTTGGCTGAAGATCTCTGGGAGGTTGTTGAAGCAATCCCGCCAAAACTCGAAGATGATCAAGCCGAATATAAGGCTTGGACCAAAAAGAATGCAAAGGCTTTGTATGCAATCCAAAATTCATGCGGGAGGGAGCTGTTCTCTTTCATAAGTGAAATTAAGATGGCAAAAGGCGCCTGGGAGGCTTTGGAACGAGAGTGCAAACCTGTGCAAGGATATGATGAGAACAATGCCGACCACTTAGTGCACTATGAATCGTTCATAGAATCATTGAGCAGTGGTGATTGGGATAAGGCAAAGAAGTGTCTTGGAGAAGTTGATGTCCGTAGTGTATCAGTAGTAAAAACAGTATACAGATATGGCGGAGAAATAGCTCTTCATGTAGCAGCCAAGGAAGGGCATGCACATATCGTGAAAGAGTTGGTGCATTTGATGACACAAGAAGATTTGAAAACAAAAACCGCACAAGGTCACACAGCTCTTCACGTAGCAGCAGGGATGGGGCATGTGCATGTTGTGAAAGAGTTGCCGGTGCCGTTGATGGGAGATGTAAAAGACAAGGATGGTGACACGGCTCTTCATATAGCAGTCCAAGAAGGGCAGGCCGATGTTGTGAAAGAGTTGGTGTTGTTGATGAGACAAGAAGACTTGAAAATAAAAAACGATGCTGGTTACACAGCTCTTCACCTAGCAGTCAATAAGGGGAACGTGCCTATGGTCAAAGAGTTAGTTACAAAAGAAAAAGGTGAGAATAATATTGGCGACGACGACTTTGAGCGTTATATACCGTTTACCACCTATGTGCAAAATGGTGATTGGGATAAGGCAAATGAGTGTCTTAGAGAACTAGATAATCCATGCAGTGCAATAACAACAGTAGATCCAAGAGACGACTACCGAGACACTGCTCTTCACCTAGCAGCCCGGGAAGGGCATTTGGATGTTATCAAAGGATTGGTGTTGTTGTTGAAAATGAGACAAGAAGATTTAGAATTGAAAACCGCTGAAGATTTCACAACATTTGGTTCTGATATAACTTTAGGGGTCAGTGAAGAATTCCTCACGGAAAGGGCCAAATACATGGTTGAACAGTGTGAGAGAACACTTGGCAGCCTTTTGGAGATACAAAACGCTGAAGGGTCCACAGCTCTTCACCTAGCAATACTGCAGGGGTATGGGGATGTTGTGAAAGAGTTGGTGCCAGTAATGAGAAAAGAAGGTTTAGAAATAAAAGACGCTGATGGAGACACAGCTCTTAACATTGCAATCTTACAAAGGCATGTGGATATTGCGAAGGAGTTGGTGCAATCGATGAGACAAGAAGGTTTGGAAATAAAAAACAAAGAGGGTTCCGATGCTCTTCACCGAGCAGCATTGAAGGGATATGTAGATATTGTGAAAGAGTTGGTGCCAGTAATGAGAAAAGAAGGTTTAGAAATAAAAGACGCTGATGGAGACACAGCTCTTAACATTGCAATCTTACAAGGGCATGTGGATATTGCGAAGGAGTTGGTGCAATCGATGAGACAAGAAGGTTTGGAAATAAAAAACAAAAACGGTTCCAATGCTCTTCACCAAACGGTCAACAATAGGCATATGCATTTTGCTAAAGAGTTGATGGCATTGATGAGACCAGAGGCTTTGGAACAAAAAGACGGTGAAGGTTATACAGCTTTAAGTATTGCTATTTTATGTTTCAAGGATGGAGACGTTTGCGAAATGGCTAAATACATGGCTGAAAAGAATGTTAAAGTACTTGGCATACCCTCCGCTCCCGATGATGAGATTCCAGTTGTCAGAGCTTGTCGTTCTAGTAAATGGAAGTCGGCTCGCTATATGTATTCTGTCACTCCACTTGAAGTGCTCGAGGGACCCAATGGCAGTGATCTTATTTGCTTTTGTCTCAATTCTAGCAAAACGATTGATTTGGCATGGGACTTGCTTCAACGTTGCCCAAATTTGGCATTCACTATCACTAAACCGCCTGATAAAACTAGTCCTATGTTGAAATTGGCTCGTATGCATTTTGCATTCTTAAGTGGAACACGACTCACATGCTGGCAAAGGTGGCTTTATGATTGTATATACATACGAGAAGTTGATCATGTTAACATTCATGATATATCTATAAATGTTGCCGAATCAACAGAAGGTCATAGCAATAAAAGGGATTTCATTTCCTCAGTTATGAGTTTATATAGAAGATTTGCTAAGAGCCTCTATATATTTTGCGGAATCCATTGTATATATGAAATGAAATCGACACATAAGTGGATCTTTCAATTTCTACATTGCATGGGTGAAGCGACAAGAATTGATAATCTCACACCGGATCAACTTGACATGGTGCAAAAATCAATCTTCAAAGCTATAGAACAAGGGCATCATGAGTTTGTTACTGAACTGTGTAAAGCAAATCCAAAACTAATCTTGGACATTGAAGATGAAAAGGGGAGGAACATATTTCATTTTGCCATCGAAAATCGTCAAAAAGAGGTTTATAGTCTTATATATGGGCTTGAAGAAGAAAAGCGACATGAGATTGCAGCTTGGTTTTTGAACTCTGGCAGTATGCTACATTTTGCCGCGAATTTATCCTCACTTCCACAATTTGATGATATTCAAGATGCAAGTTTGCAAATGCAAAGAGAACTACAATGGTTTAAGGAGGTGGAAAGTGTTATACCTCTCGACTATCATGAATCTCGAAATCGTTCAGACAGTATAACAGCACATGAACTATTTACCAAGAATCACAAGAAATTGATAGAGGTTGCAGAAAATTCGACGAAAGGAACAGCAACTTCTTGTACAGTTGTAGGTGCTCTTATTGTTACAATGACGTTTGCTGTAGCTTTCACAGTTCCTGGGGGAAATAATGACAACACAGGCCTTCCCTTGGTACTATATAGAAAGTTGTTCAAGGTTCTTATAATTTCAGATACTATATCACTTGTTTCTTCCACAACTTCAGTGATTACATTCCTGGGAGTACTCACTTCACGTTATGCAAAAGATGATTTCCTCAAATCTTTGCCCACAAAGATGATGATTGGCCTGTTCACACTTTTTTTCTCTATTGCCACCATGATGATTGCATTTTCTTGTGCACTTGTCATTGTGCTTGACGGAGAAGCATGGATTGTTATACCAAGTATTTTGTTTGCTAGTGTTCCAGCCATATCATTTGTATGGTTATTGTTTCCTCTCCTCGGAAAAATTTTCATGTCTACTTATGGACCTGGAATATTTGACAAAAGAAATAAAGTCAAACCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1123

Amino Acids

126.32

Weight (kDa)

5.62

Isoelectric Point (pI)

36.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 16 - 42 1.5e-08 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 29 - 97 2.7e-08 gag-polypeptide of LTR copia-type
Ank_2 PF12796 152 - 207 2.2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 214 - 280 3e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 244 - 351 4.2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 400 - 467 1.4e-09 Ankyrin repeats (3 copies)
Ank_5 PF13857 405 - 453 2.5e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 475 - 537 9.8e-10 Ankyrin repeats (3 copies)
Ank_5 PF13857 475 - 523 2.1e-06 Ankyrin repeats (many copies)
PGG PF13962 961 - 1071 1.3e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3026
AccB1I GGYRCC 4 cut(s) 266, 625, 1291, 1501
AccBSI CCGCTC 1 cut(s) 1865
AccI GTMKAC 2 cut(s) 444, 3323
AccII CGCG 3 cut(s) 54, 79, 2681
AclI AACGTT 1 cut(s) 2041
AclWI GGATC 3 cut(s) 968, 2375, 2433
AcsI RAATTY 6 cut(s) 211, 1148, 2050, 2683, 2875, 3312
AcuI CTGAAG 4 cut(s) 123, 1119, 1248, 3048
AcyI GRCGYC 1 cut(s) 267
AdeI CACNNNGTG 1 cut(s) 337
AfaI GTAC 4 cut(s) 1848, 2905, 2997, 3087
AfiI CCNNNNNNNGG 7 cut(s) 305, 489, 635, 1023, 2053, 2992, 3305
AflII CTTAAG 1 cut(s) 2128
AhlI ACTAGT 1 cut(s) 2087
AjnI CCWGG 4 cut(s) 269, 2959, 3078, 3334
AleI CACNNNNGTG 2 cut(s) 893, 2362
Alw21I GWGCWC 4 cut(s) 342, 1959, 2920, 3205
Alw44I GTGCAC 2 cut(s) 338, 3201
AlwI GGATC 3 cut(s) 968, 2375, 2433
AlwNI CAGNNNCTG 1 cut(s) 2960
Ama87I CYCGRG 2 cut(s) 1017, 1958
AoxI GGCC 4 cut(s) 696, 1164, 2983, 3148
ApaLI GTGCAC 2 cut(s) 338, 3201
ApeKI GCWGC 6 cut(s) 479, 584, 1013, 1203, 1463, 2639
ApoI RAATTY 6 cut(s) 211, 1148, 2050, 2683, 2875, 3312
ArsI GACNNNNNNTTYG 2 cut(s) 848, 880
Asp700I GAANNNNTTC 2 cut(s) 9, 2806
AspLEI GCGC 1 cut(s) 269
AspS9I GGNCC 5 cut(s) 174, 1164, 1233, 1964, 3332
AsuC2I CCSGG 2 cut(s) 1018, 1019
AvaI CYCGRG 2 cut(s) 1017, 1958
AvaII GGWCC 4 cut(s) 174, 1233, 1964, 3332
BaeGI GKGCMC 2 cut(s) 342, 3205
BanI GGYRCC 4 cut(s) 266, 625, 1291, 1501
BbsI GAAGAC 1 cut(s) 744
Bbv12I GWGCWC 4 cut(s) 342, 1959, 2920, 3205
BbvI GCAGC 6 cut(s) 491, 596, 1025, 1215, 1475, 2651
BccI CCATC 9 cut(s) 250, 586, 628, 650, 1328, 1538, 1705, 1790, 2576
BceAI ACGGC 2 cut(s) 613, 681
BcgI CGANNNNNNTGC 4 cut(s) 2130, 2164, 2859, 2893
BciT130I CCWGG 4 cut(s) 271, 2961, 3080, 3336
BclI TGATCA 2 cut(s) 151, 2194
BcnI CCSGG 2 cut(s) 1018, 1019
BcuI ACTAGT 1 cut(s) 2087
BfaI CTAG 8 cut(s) 782, 941, 1010, 1250, 1905, 2004, 2088, 3261
BfmI CTRYAG 3 cut(s) 1259, 2463, 2943
BfoI RGCGCY 1 cut(s) 270
BfrI CTTAAG 1 cut(s) 2128
BglI GCCNNNNNGGC 1 cut(s) 275
BglII AGATCT 1 cut(s) 106
BisI GCNGC 7 cut(s) 480, 585, 1014, 1204, 1464, 2640, 2679
BlsI GCNGC 7 cut(s) 481, 586, 1015, 1205, 1465, 2641, 2680
BmcAI AGTACT 2 cut(s) 1848, 3087
Bme1390I CCNGG 6 cut(s) 271, 1018, 1019, 2961, 3080, 3336
Bme18I GGWCC 4 cut(s) 174, 1233, 1964, 3332
BmeT110I CYCGRG 2 cut(s) 1017, 1958
BmgT120I GGNCC 5 cut(s) 174, 1164, 1233, 1964, 3332
BmiI GGNNCC 9 cut(s) 268, 627, 1234, 1293, 1444, 1503, 1654, 1965, 1966
BmrFI CCNGG 6 cut(s) 271, 1018, 1019, 2961, 3080, 3336
BmsI GCATC 4 cut(s) 748, 1438, 2485, 2710
BpiI GAAGAC 1 cut(s) 744
BplI GAGNNNNNCTC 2 cut(s) 218, 250
BpuMI CCSGG 2 cut(s) 1018, 1019
Bsa29I ATCGAT 2 cut(s) 1403, 1613
BsaAI YACGTR 1 cut(s) 580
BsaHI GRCGYC 1 cut(s) 267
BsaI GGTCTC 1 cut(s) 1717
BsaJI CCNNGG 7 cut(s) 270, 483, 1017, 2960, 2991, 3079, 3304
BsaWI WCCGGW 1 cut(s) 2422
Bsc4I CCNNNNNNNGG 7 cut(s) 305, 489, 635, 1023, 2053, 2992, 3305
Bse118I RCCGGY 1 cut(s) 622
Bse1I ACTGG 3 cut(s) 1295, 1505, 1883
Bse3DI GCAATG 3 cut(s) 1353, 1563, 2383
BseBI CCWGG 4 cut(s) 271, 2961, 3080, 3336
BseCI ATCGAT 2 cut(s) 1403, 1613
BseDI CCNNGG 7 cut(s) 270, 483, 1017, 2960, 2991, 3079, 3304
BseGI GGATG 5 cut(s) 597, 661, 1039, 1279, 1801
BseLI CCNNNNNNNGG 7 cut(s) 305, 489, 635, 1023, 2053, 2992, 3305
BseMI GCAATG 3 cut(s) 1353, 1563, 2383
BseMII CTCAG 1 cut(s) 2289
BseNI ACTGG 3 cut(s) 1295, 1505, 1883
BseRI GAGGAG 1 cut(s) 3293
BseSI GKGCMC 2 cut(s) 342, 3205
BseXI GCAGC 6 cut(s) 491, 596, 1025, 1215, 1475, 2651
Bsh1236I CGCG 3 cut(s) 54, 79, 2681
BshFI GGCC 4 cut(s) 698, 1166, 2985, 3150
BshNI GGYRCC 4 cut(s) 266, 625, 1291, 1501
BshVI ATCGAT 2 cut(s) 1403, 1613
BsiHKAI GWGCWC 4 cut(s) 342, 1959, 2920, 3205
BsiHKCI CYCGRG 2 cut(s) 1017, 1958
BsiSI CCGG 3 cut(s) 623, 1018, 2423
BslFI GGGAC 2 cut(s) 1977, 2042
BslI CCNNNNNNNGG 7 cut(s) 305, 489, 635, 1023, 2053, 2992, 3305
BsmBI CGTCTC 2 cut(s) 975, 1794
BsmFI GGGAC 2 cut(s) 1977, 2042
BsmI GAATGC 3 cut(s) 190, 2057, 2123
BsnI GGCC 4 cut(s) 698, 1166, 2985, 3150
Bso31I GGTCTC 1 cut(s) 1717
BsoBI CYCGRG 2 cut(s) 1017, 1958
Bsp1286I GDGCHC 4 cut(s) 342, 1959, 2920, 3205
Bsp1407I TGTACA 1 cut(s) 2903
Bsp143I GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
BspANI GGCC 4 cut(s) 698, 1166, 2985, 3150
BspCNI CTCAG 1 cut(s) 2288
BspDI ATCGAT 2 cut(s) 1403, 1613
BspFNI CGCG 3 cut(s) 54, 79, 2681
BspHI TCATGA 3 cut(s) 2209, 2479, 2791
BspLI GGNNCC 9 cut(s) 268, 627, 1234, 1293, 1444, 1503, 1654, 1965, 1966
BspMAI CTGCAG 1 cut(s) 1263
BspPI GGATC 3 cut(s) 968, 2375, 2433
BspQI GCTCTTC 8 cut(s) 474, 579, 675, 780, 1008, 1248, 1458, 1668
BspT107I GGYRCC 4 cut(s) 266, 625, 1291, 1501
BspTI CTTAAG 1 cut(s) 2128
BspTNI GGTCTC 1 cut(s) 1717
BsrBI CCGCTC 1 cut(s) 1865
BsrDI GCAATG 3 cut(s) 1353, 1563, 2383
BsrFI RCCGGY 1 cut(s) 622
BsrGI TGTACA 1 cut(s) 2903
BsrI ACTGG 3 cut(s) 1295, 1505, 1883
BssAI RCCGGY 1 cut(s) 622
BssECI CCNNGG 7 cut(s) 270, 483, 1017, 2960, 2991, 3079, 3304
BssMI GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
BssNAI GTATAC 1 cut(s) 445
BssNI GRCGYC 1 cut(s) 267
BssT1I CCWWGG 2 cut(s) 483, 2991
Bst1107I GTATAC 1 cut(s) 445
Bst2UI CCWGG 4 cut(s) 271, 2961, 3080, 3336
Bst6I CTCTTC 8 cut(s) 474, 579, 675, 780, 1008, 1248, 1458, 1668
BstACI GRCGYC 1 cut(s) 267
BstAFI CTTAAG 1 cut(s) 2128
BstAUI TGTACA 1 cut(s) 2903
BstBAI YACGTR 1 cut(s) 580
BstC8I GCNNGC 4 cut(s) 495, 696, 1924, 2153
BstDEI CTNAG 4 cut(s) 334, 932, 2275, 2304
BstENI CCTNNNNNAGG 1 cut(s) 303
BstF5I GGATG 5 cut(s) 597, 661, 1039, 1279, 1801
BstFNI CGCG 3 cut(s) 54, 79, 2681
BstH2I RGCGCY 1 cut(s) 270
BstHHI GCGC 1 cut(s) 269
BstKTI GATC 7 cut(s) 109, 154, 976, 1981, 2197, 2370, 2428
BstMBI GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
BstMWI GCNNNNNNNGC 4 cut(s) 200, 266, 275, 2161
BstNI CCWGG 4 cut(s) 271, 2961, 3080, 3336
BstNSI RCATGY 6 cut(s) 497, 602, 608, 1376, 1586, 2151
BstSCI CCNGG 6 cut(s) 269, 1016, 1017, 2959, 3078, 3334
BstSFI CTRYAG 3 cut(s) 1259, 2463, 2943
BstSLI GKGCMC 2 cut(s) 342, 3205
BstUI CGCG 3 cut(s) 54, 79, 2681
BstV1I GCAGC 6 cut(s) 491, 596, 1025, 1215, 1475, 2651
BstV2I GAAGAC 1 cut(s) 744
BstX2I RGATCY 3 cut(s) 106, 973, 2367
BstXI CCANNNNNNTGG 1 cut(s) 1174
BstYI RGATCY 3 cut(s) 106, 973, 2367
BstZ17I GTATAC 1 cut(s) 445
Bsu15I ATCGAT 2 cut(s) 1403, 1613
BsuRI GGCC 4 cut(s) 698, 1166, 2985, 3150
BsuTUI ATCGAT 2 cut(s) 1403, 1613
BtsCI GGATG 5 cut(s) 597, 661, 1039, 1279, 1801
BtsI GCAGTG 4 cut(s) 376, 961, 996, 1981
BtsIMutI CAGTG 7 cut(s) 376, 961, 996, 1147, 1190, 1981, 3072
Cac8I GCNNGC 4 cut(s) 495, 696, 1924, 2153
CaiI CAGNNNCTG 1 cut(s) 2960
CciI TCATGA 3 cut(s) 2209, 2479, 2791
CfoI GCGC 1 cut(s) 269
Cfr10I RCCGGY 1 cut(s) 622
Cfr13I GGNCC 5 cut(s) 174, 1164, 1233, 1964, 3332
Cfr9I CCCGGG 1 cut(s) 1017
ClaI ATCGAT 2 cut(s) 1403, 1613
CseI GACGC 2 cut(s) 1337, 1547
Csp6I GTAC 4 cut(s) 1847, 2904, 2996, 3086
CviQI GTAC 4 cut(s) 1847, 2904, 2996, 3086
DdeI CTNAG 4 cut(s) 334, 932, 2275, 2304
DinI GGCGCC 1 cut(s) 268
DpnI GATC 7 cut(s) 108, 153, 975, 1980, 2196, 2369, 2427
DpnII GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
DraIII CACNNNGTG 1 cut(s) 337
Eam1104I CTCTTC 8 cut(s) 474, 579, 675, 780, 1008, 1248, 1458, 1668
EarI CTCTTC 8 cut(s) 474, 579, 675, 780, 1008, 1248, 1458, 1668
EciI GGCGGA 1 cut(s) 471
Eco130I CCWWGG 2 cut(s) 483, 2991
Eco147I AGGCCT 1 cut(s) 2985
Eco31I GGTCTC 1 cut(s) 1717
Eco47I GGWCC 4 cut(s) 174, 1233, 1964, 3332
Eco57I CTGAAG 4 cut(s) 123, 1119, 1248, 3048
Eco88I CYCGRG 2 cut(s) 1017, 1958
EcoNI CCTNNNNNAGG 1 cut(s) 303
EcoO109I RGGNCCY 1 cut(s) 1964
EcoRI GAATTC 1 cut(s) 1148
EcoRII CCWGG 4 cut(s) 269, 2959, 3078, 3334
EcoT14I CCWWGG 2 cut(s) 483, 2991
EcoT22I ATGCAT 2 cut(s) 1695, 2118
EgeI GGCGCC 1 cut(s) 268
EheI GGCGCC 1 cut(s) 268
ErhI CCWWGG 2 cut(s) 483, 2991
Esp3I CGTCTC 2 cut(s) 975, 1794
FalI AAGNNNNNCTT 2 cut(s) 2354, 2386
FaqI GGGAC 2 cut(s) 1977, 2042
FauI CCCGC 2 cut(s) 141, 212
FauNDI CATATG 1 cut(s) 1689
FbaI TGATCA 2 cut(s) 151, 2194
FblI GTMKAC 2 cut(s) 444, 3323
Fnu4HI GCNGC 7 cut(s) 480, 585, 1014, 1204, 1464, 2640, 2679
FokI GGATG 5 cut(s) 604, 668, 1046, 1286, 1808
Fsp4HI GCNGC 7 cut(s) 480, 585, 1014, 1204, 1464, 2640, 2679
FspBI CTAG 8 cut(s) 782, 941, 1010, 1250, 1905, 2004, 2088, 3261
GlaI GCGC 1 cut(s) 268
GluI GCNGC 7 cut(s) 480, 585, 1014, 1204, 1464, 2640, 2679
HaeII RGCGCY 1 cut(s) 270
HaeIII GGCC 4 cut(s) 698, 1166, 2985, 3150
HapII CCGG 3 cut(s) 623, 1018, 2423
HgaI GACGC 2 cut(s) 1337, 1547
HhaI GCGC 1 cut(s) 269
Hin1I GRCGYC 1 cut(s) 267
Hin6I GCGC 1 cut(s) 267
HinP1I GCGC 1 cut(s) 267
HincII GTYRAC 2 cut(s) 1678, 2203
HindII GTYRAC 2 cut(s) 1678, 2203
HinfI GANTC 8 cut(s) 347, 359, 1879, 2142, 2234, 2328, 2795, 2845
HpaI GTTAAC 1 cut(s) 2203
HpaII CCGG 3 cut(s) 623, 1018, 2423
Hpy166II GTNNAC 9 cut(s) 340, 445, 885, 1236, 1678, 2203, 3156, 3203, 3324
Hpy188I TCNGA 6 cut(s) 1123, 1447, 1892, 2812, 3034, 3308
Hpy188III TCNNGA 8 cut(s) 505, 1868, 2210, 2480, 2717, 2783, 2792, 2799
Hpy8I GTNNAC 9 cut(s) 340, 445, 885, 1236, 1678, 2203, 3156, 3203, 3324
Hpy99I CGWCG 3 cut(s) 860, 863, 2884
HpyCH4IV ACGT 6 cut(s) 579, 801, 1803, 2041, 2936, 3097
HpyF10VI GCNNNNNNNGC 4 cut(s) 200, 266, 275, 2161
HpyF3I CTNAG 4 cut(s) 334, 932, 2275, 2304
HpySE526I ACGT 6 cut(s) 579, 801, 1803, 2041, 2936, 3097
Hsp92I GRCGYC 1 cut(s) 267
HspAI GCGC 1 cut(s) 267
KasI GGCGCC 1 cut(s) 266
KflI GGGWCCC 1 cut(s) 1964
Ksp22I TGATCA 2 cut(s) 151, 2194
KspAI GTTAAC 1 cut(s) 2203
Kzo9I GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
LguI GCTCTTC 8 cut(s) 474, 579, 675, 780, 1008, 1248, 1458, 1668
LmnI GCTCC 2 cut(s) 226, 1870
Lsp1109I GCAGC 6 cut(s) 491, 596, 1025, 1215, 1475, 2651
LweI GCATC 4 cut(s) 748, 1438, 2485, 2710
MaeI CTAG 8 cut(s) 782, 941, 1010, 1250, 1905, 2004, 2088, 3261
MaeII ACGT 6 cut(s) 579, 801, 1803, 2041, 2936, 3097
MaeIII GTNAC 7 cut(s) 563, 659, 764, 823, 1939, 2488, 2926
MalI GATC 7 cut(s) 108, 153, 975, 1980, 2196, 2369, 2427
MbiI CCGCTC 1 cut(s) 1865
MboI GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
MflI RGATCY 3 cut(s) 106, 973, 2367
MhlI GDGCHC 4 cut(s) 342, 1959, 2920, 3205
Mly113I GGCGCC 1 cut(s) 267
MlyI GAGTC 1 cut(s) 2136
Mph1103I ATGCAT 2 cut(s) 1695, 2118
MroXI GAANNNNTTC 2 cut(s) 9, 2806
MseI TTAA 9 cut(s) 48, 252, 1350, 1560, 1769, 1842, 2129, 2202, 2757
MslI CAYNNNNRTG 7 cut(s) 603, 893, 1032, 2362, 3137, 3182, 3283
MspA1I CMGCKG 1 cut(s) 1097
MspCI CTTAAG 1 cut(s) 2128
MspI CCGG 3 cut(s) 623, 1018, 2423
MspR9I CCNGG 6 cut(s) 271, 1018, 1019, 2961, 3080, 3336
Mva1269I GAATGC 3 cut(s) 190, 2057, 2123
MvaI CCWGG 4 cut(s) 271, 2961, 3080, 3336
MvnI CGCG 3 cut(s) 54, 79, 2681
MwoI GCNNNNNNNGC 4 cut(s) 200, 266, 275, 2161
NarI GGCGCC 1 cut(s) 267
NciI CCSGG 2 cut(s) 1018, 1019
NdeI CATATG 1 cut(s) 1689
NdeII GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
NlaIV GGNNCC 9 cut(s) 268, 627, 1234, 1293, 1444, 1503, 1654, 1965, 1966
NmuCI GTSAC 3 cut(s) 563, 659, 1939
NsiI ATGCAT 2 cut(s) 1695, 2118
NspI RCATGY 6 cut(s) 497, 602, 608, 1376, 1586, 2151
OliI CACNNNNGTG 2 cut(s) 893, 2362
PaeI GCATGC 1 cut(s) 497
PaeR7I CTCGAG 1 cut(s) 1958
PagI TCATGA 3 cut(s) 2209, 2479, 2791
PceI AGGCCT 1 cut(s) 2985
PciSI GCTCTTC 8 cut(s) 474, 579, 675, 780, 1008, 1248, 1458, 1668
PctI GAATGC 3 cut(s) 190, 2057, 2123
PdmI GAANNNNTTC 2 cut(s) 9, 2806
PfeI GAWTC 7 cut(s) 347, 359, 1879, 2234, 2328, 2795, 2845
PkrI GCNGC 7 cut(s) 481, 586, 1015, 1205, 1465, 2641, 2680
PleI GAGTC 1 cut(s) 2136
PluTI GGCGCC 1 cut(s) 270
PpsI GAGTC 1 cut(s) 2136
Ppu21I YACGTR 1 cut(s) 580
PpuMI RGGWCCY 1 cut(s) 1964
PsiI TTATAA 1 cut(s) 3026
Psp1406I AACGTT 1 cut(s) 2041
Psp5II RGGWCCY 1 cut(s) 1964
Psp6I CCWGG 4 cut(s) 269, 2959, 3078, 3334
PspGI CCWGG 4 cut(s) 269, 2959, 3078, 3334
PspN4I GGNNCC 9 cut(s) 268, 627, 1234, 1293, 1444, 1503, 1654, 1965, 1966
PspPI GGNCC 5 cut(s) 174, 1164, 1233, 1964, 3332
PspPPI RGGWCCY 1 cut(s) 1964
PspXI VCTCGAGB 1 cut(s) 1958
PstI CTGCAG 1 cut(s) 1263
PstNI CAGNNNCTG 1 cut(s) 2960
PsuI RGATCY 3 cut(s) 106, 973, 2367
RsaI GTAC 4 cut(s) 1848, 2905, 2997, 3087
RsaNI GTAC 4 cut(s) 1847, 2904, 2996, 3086
RseI CAYNNNNRTG 7 cut(s) 603, 893, 1032, 2362, 3137, 3182, 3283
SapI GCTCTTC 8 cut(s) 474, 579, 675, 780, 1008, 1248, 1458, 1668
SaqAI TTAA 9 cut(s) 48, 252, 1350, 1560, 1769, 1842, 2129, 2202, 2757
SatI GCNGC 7 cut(s) 480, 585, 1014, 1204, 1464, 2640, 2679
Sau3AI GATC 7 cut(s) 106, 151, 973, 1978, 2194, 2367, 2425
Sau96I GGNCC 5 cut(s) 174, 1164, 1233, 1964, 3332
ScaI AGTACT 2 cut(s) 1848, 3087
SchI GAGTC 1 cut(s) 2136
ScrFI CCNGG 6 cut(s) 271, 1018, 1019, 2961, 3080, 3336
SduI GDGCHC 4 cut(s) 342, 1959, 2920, 3205
SfaNI GCATC 4 cut(s) 748, 1438, 2485, 2710
SfcI CTRYAG 3 cut(s) 1259, 2463, 2943
SfoI GGCGCC 1 cut(s) 268
Sfr274I CTCGAG 1 cut(s) 1958
SinI GGWCC 4 cut(s) 174, 1233, 1964, 3332
SlaI CTCGAG 1 cut(s) 1958
SmaI CCCGGG 1 cut(s) 1019
SmiMI CAYNNNNRTG 7 cut(s) 603, 893, 1032, 2362, 3137, 3182, 3283
SmlI CTYRAG 2 cut(s) 1958, 2128
SmoI CTYRAG 2 cut(s) 1958, 2128
SpeI ACTAGT 1 cut(s) 2087
SphI GCATGC 1 cut(s) 497
SseBI AGGCCT 1 cut(s) 2985
SspDI GGCGCC 1 cut(s) 266
SspI AATATT 2 cut(s) 850, 3342
SspMI CTAG 8 cut(s) 782, 941, 1010, 1250, 1905, 2004, 2088, 3261
StuI AGGCCT 1 cut(s) 2985
StyD4I CCNGG 6 cut(s) 269, 1016, 1017, 2959, 3078, 3334
StyI CCWWGG 2 cut(s) 483, 2991
TaiI ACGT 6 cut(s) 582, 804, 1806, 2044, 2939, 3100
TaqI TCGA 9 cut(s) 144, 1403, 1613, 1959, 2354, 2571, 2784, 2800, 2879
TatI WGTACW 3 cut(s) 1846, 2903, 3085
TauI GCSGC 1 cut(s) 2681
TfiI GAWTC 7 cut(s) 347, 359, 1879, 2234, 2328, 2795, 2845
Tru1I TTAA 9 cut(s) 48, 252, 1350, 1560, 1769, 1842, 2129, 2202, 2757
Tru9I TTAA 9 cut(s) 48, 252, 1350, 1560, 1769, 1842, 2129, 2202, 2757
TscAI CASTG 7 cut(s) 376, 961, 1003, 1147, 1190, 1981, 3072
TseFI GTSAC 3 cut(s) 563, 659, 1939
TseI GCWGC 6 cut(s) 479, 584, 1013, 1203, 1463, 2639
Tsp45I GTSAC 3 cut(s) 563, 659, 1939
TspGWI ACGGA 3 cut(s) 407, 1172, 3237
TspMI CCCGGG 1 cut(s) 1017
TspRI CASTG 7 cut(s) 376, 961, 1003, 1147, 1190, 1981, 3072
Vha464I CTTAAG 1 cut(s) 2128
VneI GTGCAC 2 cut(s) 338, 3201
VpaK11BI GGWCC 4 cut(s) 174, 1233, 1964, 3332
XagI CCTNNNNNAGG 1 cut(s) 303
XapI RAATTY 6 cut(s) 211, 1148, 2050, 2683, 2875, 3312
XceI RCATGY 6 cut(s) 497, 602, 608, 1376, 1586, 2151
XhoI CTCGAG 1 cut(s) 1958
XmaI CCCGGG 1 cut(s) 1017
XmiI GTMKAC 2 cut(s) 444, 3323
XmnI GAANNNNTTC 2 cut(s) 9, 2806
XspI CTAG 8 cut(s) 782, 941, 1010, 1250, 1905, 2004, 2088, 3261
ZrmI AGTACT 2 cut(s) 1848, 3087
Zsp2I ATGCAT 2 cut(s) 1695, 2118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.