Rw7G039040

spectrin binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000952
Physical Location & Seq
Reverse (-)
59916102 .. 59922794
6693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G039040.1

Sequence Viewer

Length: 1899 bp
ATGGCAAGTACTCCAGTTGGCTCTAATGCACTTATTTTGGAAGTTCTTGACCGTAATAACTATAAACATTGGAGATCGAGGTTGGAAACTTATTTGTTGGCTGAAGATCTCTGGGAGGTTGTTGAAGCAATCCCGCCAAAACTCGAAGATGATCAAGCCGAATATAAGGCTTGGACCAAAAAGAATGCAAAGGCTTTGTATGCAATCCAAAATTCATGCGGGAGGGAGCTGTTCTCTTTCATAAGTGAAATTAAGACGGCAAAAGGTGCTTGGGAGGCTTTGGAAGCAGTGCATAGATATGATGAGAACAATACCGACCACTTAGTGCGCTATAAATCGTTCATAGAATCAGTGAGCAGTGGTGATTGGGATAAGGCAAAGAAGTGTCTTGGAGAAGTTGATGTCCGTAGTGTATTAGTAGTAAAAACAGTATACAGCTATGGCGGAGAAATAGCTCTTCATGTAGCAGCCGAGGAAGGGCATGCACATATCGTGAAAGAGTTGGTGCATTTGATGTCACAAGAAGATTTGAAAACAAAAACCGCTCAAGGTCACACAGCTCTTCACGTAGCCGCGTGGATGGGGCATGTGCTAGTTGTGAAAGAGTTACCGGTGCCGTTGATGGGAGAAGTAAAAAACTGGACAGGTGACACAGCTCTTCATATAGCAGTCCAGGAAGGGAAGGTCGATATTGTTAAAGAGTTGGTGCTGTTGATGAGACAAGAAGACTTGAAAATAAAAAATGATACTGGTTACACAGCTCTTCACCTAGCAGTCAATAAGGGGAATATGCCTATGGTCAAAGAGTTCGTGAGAAAAGAAAAAGGTGAGAATAATATTGGCGAGGACGACTTTGAGCGTTATATACCATTTACCACCTATGTGGGAATCGGTGATTGGGATAAGGCAAATGAGTGTCTTAGAGAACTAGATAATCCTTGTGGTGCAGTAACAGCAGTAGATCCAAGAGATGACTTCCGAGACACTGCTCTTCATATAGCAGCCCGGGATGGGTATTTGAATGTTACCAAAGGATTGGTGTTGTTGCTTAAAATGAGACAAGAATATTTGGAATTGAAAACCGCTGAAGATTTCACTTCTTTTGGTTCTGGTATAACTTTAGGGATCAGTGAAGAATTCCTCATGGACAGGGCCAAATACATGGTTGAACAGTATGAGAAAACACTTGGCAGCATTTTGGAAATACAAAACGCCAAAGGTTCCACAGCTCTTCACCTAGCAGTACTGCTAGGGTATGGGGATATTGTGAAAGAGTTGGTGCCATTAATGAGAAAAGAAGGTTTAGAAATAAAAGACGCTAGTGGAGACACAGCTCTTCACATAGCAATCAAAAAAGGGCATGTGGATATTGCGAAGGAGTTGCTGCAATCGATGAGACCAGTGGCTATGGAAGAAAAGGACAATCAAGGTTTTACAGCTTTGAGTTTGGCTATTCAATGTTTCAAGGATGGAGAAGTTTGCGAAATGGCTAAATACATGGCTGAGAAAAATGATACGGTATTCGGCATACCCTCGGCCCGCGGTGATGATATTCCAGTTGTCAGAGCTTTTCGTGGGGGTAAGAGGAAATTGGCTCGCTATATCTATTCTGTCACTCCACTTGAAGCTCTCAAGGGACCAAATGGCAGTTTAGTTATTTGCTTATGTCTCGATGCTAGCAACATGATTGATTTGGCATGGCACTTGCTTCAACGTTGCCCAAATTTGGCTTTCACTATCACTAAACCGCCTGAATCTACTCCTATGATGAAATTGGCTCGCATGCATTTTGCATTCTTAAGTGGAACACGACTCACACGTTGGCAGAGATGGCTTTATGATTTTGATAGGATCCCCTTTATTTACTTCCCCATGAGTCCATTGATGAGAAGGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 DUF4219

Protein Analysis

632

Amino Acids

71.16

Weight (kDa)

6.03

Isoelectric Point (pI)

31.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 16 - 42 6.7e-08 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 29 - 105 5.4e-11 gag-polypeptide of LTR copia-type
Ank_2 PF12796 148 - 203 9.7e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 215 - 274 1.7e-09 Ankyrin repeats (3 copies)
Ank_5 PF13857 216 - 258 2.2e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 436 - 503 2.2e-09 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 613, 1279
AccBSI CCGCTC 1 cut(s) 545
AccI GTMKAC 1 cut(s) 432
AccII CGCG 2 cut(s) 575, 1542
AciI CCGC 9 cut(s) 134, 219, 444, 543, 573, 1083, 1540, 1542, 1748
AclI AACGTT 1 cut(s) 1714
AclWI GGATC 4 cut(s) 956, 1133, 1846, 1859
AcsI RAATTY 3 cut(s) 211, 1136, 1723
AcuI CTGAAG 2 cut(s) 123, 1107
AdeI CACNNNGTG 1 cut(s) 325
AfaI GTAC 2 cut(s) 10, 1245
AfiI CCNNNNNNNGG 4 cut(s) 477, 623, 1011, 1726
AflII CTTAAG 1 cut(s) 1798
AflIII ACRYGT 1 cut(s) 1817
AgeI ACCGGT 1 cut(s) 610
AjnI CCWGG 1 cut(s) 672
AjuI GAANNNNNNNTTGG 2 cut(s) 880, 912
AleI CACNNNNGTG 1 cut(s) 881
Alw26I GTCTC 6 cut(s) 712, 975, 1051, 1320, 1390, 1673
AlwI GGATC 4 cut(s) 956, 1133, 1846, 1859
Ama87I CYCGRG 1 cut(s) 1005
AoxI GGCC 2 cut(s) 1152, 1536
ApeKI GCWGC 4 cut(s) 467, 1001, 1191, 1384
ApoI RAATTY 3 cut(s) 211, 1136, 1723
AseI ATTAAT 1 cut(s) 1286
AsiGI ACCGGT 1 cut(s) 610
AspLEI GCGC 1 cut(s) 330
AspS9I GGNCC 4 cut(s) 174, 1152, 1537, 1637
AsuC2I CCSGG 2 cut(s) 1006, 1007
AsuHPI GGTGA 7 cut(s) 374, 659, 758, 839, 905, 1226, 1556
AsuNHI GCTAGC 1 cut(s) 1676
AvaI CYCGRG 1 cut(s) 1005
AvaII GGWCC 2 cut(s) 174, 1637
BamHI GGATCC 1 cut(s) 1851
BanI GGYRCC 2 cut(s) 613, 1279
BbsI GAAGAC 1 cut(s) 732
BbvI GCAGC 4 cut(s) 479, 1013, 1203, 1371
BccI CCATC 5 cut(s) 574, 616, 1004, 1463, 1824
BceAI ACGGC 2 cut(s) 273, 601
BcgI CGANNNNNNTGC 2 cut(s) 1363, 1397
BciT130I CCWGG 1 cut(s) 674
BclI TGATCA 1 cut(s) 151
BcnI CCSGG 2 cut(s) 1006, 1007
BcoDI GTCTC 6 cut(s) 712, 975, 1051, 1320, 1390, 1673
BfaI CTAG 8 cut(s) 593, 770, 929, 1238, 1250, 1320, 1677, 1897
BfrI CTTAAG 1 cut(s) 1798
BglII AGATCT 1 cut(s) 106
BisI GCNGC 5 cut(s) 468, 573, 1002, 1192, 1385
BlsI GCNGC 5 cut(s) 469, 574, 1003, 1193, 1386
BmcAI AGTACT 2 cut(s) 10, 1245
Bme1390I CCNGG 3 cut(s) 674, 1006, 1007
Bme18I GGWCC 2 cut(s) 174, 1637
BmeT110I CYCGRG 1 cut(s) 1005
BmgT120I GGNCC 4 cut(s) 174, 1152, 1537, 1637
BmiI GGNNCC 5 cut(s) 615, 1222, 1281, 1638, 1853
BmrFI CCNGG 3 cut(s) 674, 1006, 1007
BmsI GCATC 1 cut(s) 1663
BmtI GCTAGC 1 cut(s) 1680
BpiI GAAGAC 1 cut(s) 732
BplI GAGNNNNNCTC 2 cut(s) 218, 250
BpuEI CTTGAG 2 cut(s) 531, 1616
BpuMI CCSGG 2 cut(s) 1006, 1007
Bsa29I ATCGAT 1 cut(s) 1391
BsaAI YACGTR 1 cut(s) 568
BsaI GGTCTC 1 cut(s) 1390
BsaJI CCNNGG 4 cut(s) 471, 1005, 1533, 1540
BsaWI WCCGGW 1 cut(s) 610
Bsc4I CCNNNNNNNGG 4 cut(s) 477, 623, 1011, 1726
Bse118I RCCGGY 1 cut(s) 610
Bse1I ACTGG 5 cut(s) 14, 644, 754, 1400, 1556
BseBI CCWGG 1 cut(s) 674
BseCI ATCGAT 1 cut(s) 1391
BseDI CCNNGG 4 cut(s) 471, 1005, 1533, 1540
BseGI GGATG 3 cut(s) 585, 1015, 1474
BseLI CCNNNNNNNGG 4 cut(s) 477, 623, 1011, 1726
BseMII CTCAG 1 cut(s) 1494
BseNI ACTGG 5 cut(s) 14, 644, 754, 1400, 1556
BseXI GCAGC 4 cut(s) 479, 1013, 1203, 1371
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 2 cut(s) 575, 1542
BshFI GGCC 2 cut(s) 1154, 1538
BshNI GGYRCC 2 cut(s) 613, 1279
BshTI ACCGGT 1 cut(s) 610
BshVI ATCGAT 1 cut(s) 1391
BsiHKCI CYCGRG 1 cut(s) 1005
BsiSI CCGG 2 cut(s) 611, 1006
BslFI GGGAC 1 cut(s) 1650
BslI CCNNNNNNNGG 4 cut(s) 477, 623, 1011, 1726
BsmAI GTCTC 6 cut(s) 712, 975, 1051, 1320, 1390, 1673
BsmFI GGGAC 1 cut(s) 1650
BsmI GAATGC 2 cut(s) 190, 1793
BsnI GGCC 2 cut(s) 1154, 1538
Bso31I GGTCTC 1 cut(s) 1390
BsoBI CYCGRG 1 cut(s) 1005
Bsp143I GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
BspACI CCGC 9 cut(s) 134, 219, 444, 543, 573, 1083, 1540, 1542, 1748
BspANI GGCC 2 cut(s) 1154, 1538
BspCNI CTCAG 1 cut(s) 1495
BspDI ATCGAT 1 cut(s) 1391
BspFNI CGCG 2 cut(s) 575, 1542
BspLI GGNNCC 5 cut(s) 615, 1222, 1281, 1638, 1853
BspOI GCTAGC 1 cut(s) 1680
BspPI GGATC 4 cut(s) 956, 1133, 1846, 1859
BspQI GCTCTTC 7 cut(s) 462, 567, 663, 768, 996, 1236, 1341
BspT107I GGYRCC 2 cut(s) 613, 1279
BspTI CTTAAG 1 cut(s) 1798
BspTNI GGTCTC 1 cut(s) 1390
BsrBI CCGCTC 1 cut(s) 545
BsrFI RCCGGY 1 cut(s) 610
BsrI ACTGG 5 cut(s) 14, 644, 754, 1400, 1556
BssAI RCCGGY 1 cut(s) 610
BssECI CCNNGG 4 cut(s) 471, 1005, 1533, 1540
BssMI GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
BssNAI GTATAC 1 cut(s) 433
Bst1107I GTATAC 1 cut(s) 433
Bst2UI CCWGG 1 cut(s) 674
Bst4CI ACNGT 4 cut(s) 53, 430, 1173, 1519
Bst6I CTCTTC 7 cut(s) 462, 567, 663, 768, 996, 1236, 1341
BstAFI CTTAAG 1 cut(s) 1798
BstAPI GCANNNNNTGC 1 cut(s) 266
BstBAI YACGTR 1 cut(s) 568
BstC8I GCNNGC 6 cut(s) 483, 1540, 1597, 1678, 1780, 1784
BstDEI CTNAG 3 cut(s) 322, 920, 1503
BstDSI CCRYGG 1 cut(s) 1540
BstF5I GGATG 3 cut(s) 585, 1015, 1474
BstFNI CGCG 2 cut(s) 575, 1542
BstHHI GCGC 1 cut(s) 330
BstKTI GATC 6 cut(s) 77, 109, 154, 964, 1128, 1854
BstMAI GTCTC 6 cut(s) 712, 975, 1051, 1320, 1390, 1673
BstMBI GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
BstMWI GCNNNNNNNGC 6 cut(s) 200, 266, 275, 284, 953, 1831
BstNI CCWGG 1 cut(s) 674
BstNSI RCATGY 4 cut(s) 485, 590, 1364, 1786
BstSCI CCNGG 3 cut(s) 672, 1004, 1005
BstUI CGCG 2 cut(s) 575, 1542
BstV1I GCAGC 4 cut(s) 479, 1013, 1203, 1371
BstV2I GAAGAC 1 cut(s) 732
BstX2I RGATCY 3 cut(s) 106, 961, 1851
BstXI CCANNNNNNTGG 3 cut(s) 883, 1036, 1162
BstYI RGATCY 3 cut(s) 106, 961, 1851
BstZ17I GTATAC 1 cut(s) 433
Bsu15I ATCGAT 1 cut(s) 1391
BsuRI GGCC 2 cut(s) 1154, 1538
BsuTUI ATCGAT 1 cut(s) 1391
BtgI CCRYGG 1 cut(s) 1540
BtsCI GGATG 3 cut(s) 585, 1015, 1474
BtsI GCAGTG 3 cut(s) 294, 364, 984
BtsIMutI CAGTG 6 cut(s) 294, 357, 364, 984, 1135, 1407
Cac8I GCNNGC 6 cut(s) 483, 1540, 1597, 1678, 1780, 1784
CfoI GCGC 1 cut(s) 330
Cfr10I RCCGGY 1 cut(s) 610
Cfr13I GGNCC 4 cut(s) 174, 1152, 1537, 1637
Cfr42I CCGCGG 1 cut(s) 1543
Cfr9I CCCGGG 1 cut(s) 1005
ClaI ATCGAT 1 cut(s) 1391
CseI GACGC 1 cut(s) 1325
Csp6I GTAC 2 cut(s) 9, 1244
CspAI ACCGGT 1 cut(s) 610
CviQI GTAC 2 cut(s) 9, 1244
DdeI CTNAG 3 cut(s) 322, 920, 1503
DpnI GATC 6 cut(s) 76, 108, 153, 963, 1127, 1853
DpnII GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
DraIII CACNNNGTG 1 cut(s) 325
Eam1104I CTCTTC 7 cut(s) 462, 567, 663, 768, 996, 1236, 1341
EarI CTCTTC 7 cut(s) 462, 567, 663, 768, 996, 1236, 1341
EciI GGCGGA 1 cut(s) 459
Eco31I GGTCTC 1 cut(s) 1390
Eco47I GGWCC 2 cut(s) 174, 1637
Eco57I CTGAAG 2 cut(s) 123, 1107
Eco88I CYCGRG 1 cut(s) 1005
EcoRI GAATTC 1 cut(s) 1136
EcoRII CCWGG 1 cut(s) 672
EcoT22I ATGCAT 1 cut(s) 1788
FaqI GGGAC 1 cut(s) 1650
FauI CCCGC 3 cut(s) 141, 212, 1547
FbaI TGATCA 1 cut(s) 151
FblI GTMKAC 1 cut(s) 432
Fnu4HI GCNGC 5 cut(s) 468, 573, 1002, 1192, 1385
FokI GGATG 3 cut(s) 592, 1022, 1481
Fsp4HI GCNGC 5 cut(s) 468, 573, 1002, 1192, 1385
FspBI CTAG 8 cut(s) 593, 770, 929, 1238, 1250, 1320, 1677, 1897
GlaI GCGC 1 cut(s) 329
GluI GCNGC 5 cut(s) 468, 573, 1002, 1192, 1385
HaeIII GGCC 2 cut(s) 1154, 1538
HapII CCGG 2 cut(s) 611, 1006
HgaI GACGC 1 cut(s) 1325
HhaI GCGC 1 cut(s) 330
Hin6I GCGC 1 cut(s) 328
HinP1I GCGC 1 cut(s) 328
HinfI GANTC 5 cut(s) 347, 888, 1754, 1812, 1876
HpaII CCGG 2 cut(s) 611, 1006
HphI GGTGA 7 cut(s) 374, 659, 758, 839, 905, 1226, 1556
Hpy166II GTNNAC 1 cut(s) 433
Hpy188I TCNGA 2 cut(s) 980, 1565
Hpy188III TCNNGA 4 cut(s) 47, 493, 811, 1670
Hpy8I GTNNAC 1 cut(s) 433
HpyAV CCTTC 6 cut(s) 470, 671, 676, 1292, 1369, 1884
HpyCH4III ACNGT 4 cut(s) 53, 430, 1173, 1519
HpyCH4IV ACGT 3 cut(s) 567, 1714, 1819
HpyF10VI GCNNNNNNNGC 6 cut(s) 200, 266, 275, 284, 953, 1831
HpyF3I CTNAG 3 cut(s) 322, 920, 1503
HpySE526I ACGT 3 cut(s) 567, 1714, 1819
HspAI GCGC 1 cut(s) 328
Ksp22I TGATCA 1 cut(s) 151
KspI CCGCGG 1 cut(s) 1543
Kzo9I GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
LguI GCTCTTC 7 cut(s) 462, 567, 663, 768, 996, 1236, 1341
LmnI GCTCC 1 cut(s) 226
Lsp1109I GCAGC 4 cut(s) 479, 1013, 1203, 1371
LweI GCATC 1 cut(s) 1663
MaeI CTAG 8 cut(s) 593, 770, 929, 1238, 1250, 1320, 1677, 1897
MaeII ACGT 3 cut(s) 567, 1714, 1819
MaeIII GTNAC 8 cut(s) 516, 551, 606, 647, 752, 949, 1024, 1612
MalI GATC 6 cut(s) 76, 108, 153, 963, 1127, 1853
MbiI CCGCTC 1 cut(s) 545
MboI GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
MflI RGATCY 3 cut(s) 106, 961, 1851
MluCI AATT 7 cut(s) 211, 249, 1073, 1136, 1589, 1723, 1772
MlyI GAGTC 2 cut(s) 1806, 1885
MmeI TCCRAC 1 cut(s) 63
MnlI CCTC 9 cut(s) 72, 109, 216, 268, 466, 838, 1151, 1543, 1578
Mph1103I ATGCAT 1 cut(s) 1788
MseI TTAA 5 cut(s) 252, 696, 1050, 1286, 1799
MslI CAYNNNNRTG 2 cut(s) 297, 881
MspA1I CMGCKG 2 cut(s) 1085, 1542
MspCI CTTAAG 1 cut(s) 1798
MspI CCGG 2 cut(s) 611, 1006
MspR9I CCNGG 3 cut(s) 674, 1006, 1007
Mva1269I GAATGC 2 cut(s) 190, 1793
MvaI CCWGG 1 cut(s) 674
MvnI CGCG 2 cut(s) 575, 1542
MwoI GCNNNNNNNGC 6 cut(s) 200, 266, 275, 284, 953, 1831
NciI CCSGG 2 cut(s) 1006, 1007
NdeII GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
NheI GCTAGC 1 cut(s) 1676
NlaIV GGNNCC 5 cut(s) 615, 1222, 1281, 1638, 1853
NmeAIII GCCGAG 2 cut(s) 496, 1514
NmuCI GTSAC 4 cut(s) 516, 551, 647, 1612
NsiI ATGCAT 1 cut(s) 1788
NspI RCATGY 4 cut(s) 485, 590, 1364, 1786
OliI CACNNNNGTG 1 cut(s) 881
PaeI GCATGC 2 cut(s) 485, 1786
PciSI GCTCTTC 7 cut(s) 462, 567, 663, 768, 996, 1236, 1341
PcsI WCGNNNNNNNCGW 1 cut(s) 1816
PctI GAATGC 2 cut(s) 190, 1793
PfeI GAWTC 3 cut(s) 347, 888, 1754
PfoI TCCNGGA 1 cut(s) 672
PinAI ACCGGT 1 cut(s) 610
PkrI GCNGC 5 cut(s) 469, 574, 1003, 1193, 1386
PleI GAGTC 2 cut(s) 1806, 1884
PpsI GAGTC 2 cut(s) 1806, 1884
Ppu21I YACGTR 1 cut(s) 568
PshBI ATTAAT 1 cut(s) 1286
Psp1406I AACGTT 1 cut(s) 1714
Psp6I CCWGG 1 cut(s) 672
PspGI CCWGG 1 cut(s) 672
PspN4I GGNNCC 5 cut(s) 615, 1222, 1281, 1638, 1853
PspPI GGNCC 4 cut(s) 174, 1152, 1537, 1637
PsuI RGATCY 3 cut(s) 106, 961, 1851
RsaI GTAC 2 cut(s) 10, 1245
RsaNI GTAC 2 cut(s) 9, 1244
RseI CAYNNNNRTG 2 cut(s) 297, 881
SacII CCGCGG 1 cut(s) 1543
SapI GCTCTTC 7 cut(s) 462, 567, 663, 768, 996, 1236, 1341
SaqAI TTAA 5 cut(s) 252, 696, 1050, 1286, 1799
SatI GCNGC 5 cut(s) 468, 573, 1002, 1192, 1385
Sau3AI GATC 6 cut(s) 74, 106, 151, 961, 1125, 1851
Sau96I GGNCC 4 cut(s) 174, 1152, 1537, 1637
ScaI AGTACT 2 cut(s) 10, 1245
SchI GAGTC 2 cut(s) 1806, 1885
ScrFI CCNGG 3 cut(s) 674, 1006, 1007
SfaNI GCATC 1 cut(s) 1663
Sfr303I CCGCGG 1 cut(s) 1543
SgrBI CCGCGG 1 cut(s) 1543
SinI GGWCC 2 cut(s) 174, 1637
SmaI CCCGGG 1 cut(s) 1007
SmiMI CAYNNNNRTG 2 cut(s) 297, 881
SmlI CTYRAG 3 cut(s) 546, 1631, 1798
SmoI CTYRAG 3 cut(s) 546, 1631, 1798
SphI GCATGC 2 cut(s) 485, 1786
Sse9I AATT 7 cut(s) 211, 249, 1073, 1136, 1589, 1723, 1772
SsiI CCGC 9 cut(s) 134, 219, 444, 543, 573, 1083, 1540, 1542, 1748
SspI AATATT 2 cut(s) 838, 1067
SspMI CTAG 8 cut(s) 593, 770, 929, 1238, 1250, 1320, 1677, 1897
StyD4I CCNGG 3 cut(s) 672, 1004, 1005
TaaI ACNGT 4 cut(s) 53, 430, 1173, 1519
TaiI ACGT 3 cut(s) 570, 1717, 1822
TaqI TCGA 5 cut(s) 77, 144, 687, 1391, 1671
TasI AATT 7 cut(s) 211, 249, 1073, 1136, 1589, 1723, 1772
TatI WGTACW 2 cut(s) 8, 1243
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 3 cut(s) 347, 888, 1754
Tru1I TTAA 5 cut(s) 252, 696, 1050, 1286, 1799
Tru9I TTAA 5 cut(s) 252, 696, 1050, 1286, 1799
TscAI CASTG 6 cut(s) 294, 357, 364, 991, 1135, 1407
TseFI GTSAC 4 cut(s) 516, 551, 647, 1612
TseI GCWGC 4 cut(s) 467, 1001, 1191, 1384
Tsp45I GTSAC 4 cut(s) 516, 551, 647, 1612
TspDTI ATGAA 7 cut(s) 204, 229, 331, 449, 650, 983, 1784
TspGWI ACGGA 1 cut(s) 395
TspMI CCCGGG 1 cut(s) 1005
TspRI CASTG 6 cut(s) 294, 357, 364, 991, 1135, 1407
Vha464I CTTAAG 1 cut(s) 1798
VpaK11BI GGWCC 2 cut(s) 174, 1637
VspI ATTAAT 1 cut(s) 1286
XapI RAATTY 3 cut(s) 211, 1136, 1723
XceI RCATGY 4 cut(s) 485, 590, 1364, 1786
XmaI CCCGGG 1 cut(s) 1005
XmiI GTMKAC 1 cut(s) 432
XspI CTAG 8 cut(s) 593, 770, 929, 1238, 1250, 1320, 1677, 1897
ZrmI AGTACT 2 cut(s) 10, 1245
Zsp2I ATGCAT 1 cut(s) 1788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.