RLG00000017262

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
14596810 .. 14597267
458 bp
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UTR
Exon/CDS
Intron
RLM00000017262

Sequence Viewer

Length: 363 bp
ATGTCTAGGTTACTCTCTTTGAGAGGTAGGTGGAGGCAGTGGCCTCTTGGCGGCGGTTTTGCAAATTGGGTTAGAGGAGATAGGGTTTCCTTCTTGTCTAGTCGCTGGGGGATTGAGGATGGCGAGGTTCCCCGTCGTTTGGCTCGTCGGGTCGCAAAGTGGAGCACCGGGGGGAGGTTTGCCTCCTGGGGATTTCCTTTTGTGCCAGGTCGCTGGGCGAGGATGGTGGCTGATGACTGGTCGCCATACAAGGAGGCTTGCACCGCCGGGCTAACAGATGCAGCGGGGTTGGTTGCTGCTGGGAGAGGCGACGCTGGCGACGACCAGTGGTGGATGACCTCCCAGTTCGGCGTCGTCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

121

Amino Acids

13.42

Weight (kDa)

10.62

Isoelectric Point (pI)

61.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 357
AciI CCGC 4 cut(s) 51, 54, 264, 284
AcyI GRCGYC 1 cut(s) 351
AfiI CCNNNNNNNGG 3 cut(s) 50, 139, 174
AjnI CCWGG 2 cut(s) 185, 205
Alw21I GWGCWC 1 cut(s) 167
AoxI GGCC 1 cut(s) 41
ApeKI GCWGC 2 cut(s) 281, 296
AsuC2I CCSGG 2 cut(s) 169, 268
Bbv12I GWGCWC 1 cut(s) 167
BbvI GCAGC 2 cut(s) 283, 293
BccI CCATC 2 cut(s) 113, 217
BciT130I CCWGG 2 cut(s) 187, 207
BcnI CCSGG 2 cut(s) 169, 268
BfaI CTAG 3 cut(s) 6, 99, 361
BisI GCNGC 3 cut(s) 52, 282, 297
BlsI GCNGC 3 cut(s) 53, 283, 298
Bme1390I CCNGG 4 cut(s) 169, 187, 207, 268
BmiI GGNNCC 1 cut(s) 129
BmrFI CCNGG 4 cut(s) 169, 187, 207, 268
BmrI ACTGGG 1 cut(s) 337
BmsI GCATC 1 cut(s) 268
BmuI ACTGGG 1 cut(s) 337
BpuMI CCSGG 2 cut(s) 169, 268
BsaHI GRCGYC 1 cut(s) 351
BsaJI CCNNGG 2 cut(s) 168, 186
BsaXI ACNNNNNCTCC 2 cut(s) 69, 99
Bsc4I CCNNNNNNNGG 3 cut(s) 50, 139, 174
Bse1I ACTGG 3 cut(s) 242, 325, 343
BseBI CCWGG 2 cut(s) 187, 207
BseDI CCNNGG 2 cut(s) 168, 186
BseGI GGATG 3 cut(s) 124, 228, 339
BseLI CCNNNNNNNGG 3 cut(s) 50, 139, 174
BseNI ACTGG 3 cut(s) 242, 325, 343
BseRI GAGGAG 1 cut(s) 90
BseXI GCAGC 2 cut(s) 283, 293
BseYI CCCAGC 3 cut(s) 105, 213, 299
BshFI GGCC 1 cut(s) 43
BsiHKAI GWGCWC 1 cut(s) 167
BsiSI CCGG 2 cut(s) 168, 267
BslI CCNNNNNNNGG 3 cut(s) 50, 139, 174
BsnI GGCC 1 cut(s) 43
Bsp1286I GDGCHC 1 cut(s) 167
BspACI CCGC 4 cut(s) 51, 54, 264, 284
BspANI GGCC 1 cut(s) 43
BspLI GGNNCC 1 cut(s) 129
BsrI ACTGG 3 cut(s) 242, 325, 343
BssECI CCNNGG 2 cut(s) 168, 186
BssNI GRCGYC 1 cut(s) 351
Bst2UI CCWGG 2 cut(s) 187, 207
BstACI GRCGYC 1 cut(s) 351
BstC8I GCNNGC 2 cut(s) 259, 316
BstF5I GGATG 3 cut(s) 124, 228, 339
BstMWI GCNNNNNNNGC 2 cut(s) 263, 315
BstNI CCWGG 2 cut(s) 187, 207
BstSCI CCNGG 4 cut(s) 167, 185, 205, 266
BstV1I GCAGC 2 cut(s) 283, 293
BstXI CCANNNNNNTGG 1 cut(s) 213
BsuRI GGCC 1 cut(s) 43
BtsCI GGATG 3 cut(s) 124, 228, 339
BtsI GCAGTG 1 cut(s) 44
BtsIMutI CAGTG 2 cut(s) 44, 332
Cac8I GCNNGC 2 cut(s) 259, 316
CseI GACGC 2 cut(s) 320, 340
CviJI RGCY 5 cut(s) 43, 143, 230, 257, 271
CviKI_1 RGCY 5 cut(s) 43, 143, 230, 257, 271
EcoRII CCWGG 2 cut(s) 185, 205
FaiI YATR 1 cut(s) 247
FauI CCCGC 1 cut(s) 277
FblI GTMKAC 1 cut(s) 357
Fnu4HI GCNGC 3 cut(s) 52, 282, 297
FokI GGATG 3 cut(s) 131, 235, 346
Fsp4HI GCNGC 3 cut(s) 52, 282, 297
FspBI CTAG 3 cut(s) 6, 99, 361
GluI GCNGC 3 cut(s) 52, 282, 297
GsaI CCCAGC 3 cut(s) 109, 217, 303
HaeIII GGCC 1 cut(s) 43
HapII CCGG 2 cut(s) 168, 267
HgaI GACGC 2 cut(s) 320, 340
Hin1I GRCGYC 1 cut(s) 351
HincII GTYRAC 1 cut(s) 358
HindII GTYRAC 1 cut(s) 358
HpaII CCGG 2 cut(s) 168, 267
Hpy166II GTNNAC 1 cut(s) 358
Hpy8I GTNNAC 1 cut(s) 358
Hpy99I CGWCG 6 cut(s) 138, 150, 314, 323, 356, 359
HpyAV CCTTC 1 cut(s) 100
HpyCH4V TGCA 3 cut(s) 62, 261, 281
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 315
Hsp92I GRCGYC 1 cut(s) 351
LmnI GCTCC 1 cut(s) 162
Lsp1109I GCAGC 2 cut(s) 283, 293
LweI GCATC 1 cut(s) 268
MaeI CTAG 3 cut(s) 6, 99, 361
MaeIII GTNAC 1 cut(s) 9
MhlI GDGCHC 1 cut(s) 167
MluCI AATT 1 cut(s) 64
MspA1I CMGCKG 1 cut(s) 284
MspI CCGG 2 cut(s) 168, 267
MspR9I CCNGG 4 cut(s) 169, 187, 207, 268
MvaI CCWGG 2 cut(s) 187, 207
MwoI GCNNNNNNNGC 2 cut(s) 263, 315
NciI CCSGG 2 cut(s) 169, 268
NlaIV GGNNCC 1 cut(s) 129
PcsI WCGNNNNNNNCGW 3 cut(s) 142, 318, 354
PkrI GCNGC 3 cut(s) 53, 283, 298
Psp6I CCWGG 2 cut(s) 185, 205
PspFI CCCAGC 3 cut(s) 105, 213, 299
PspGI CCWGG 2 cut(s) 185, 205
PspN4I GGNNCC 1 cut(s) 129
SalI GTCGAC 1 cut(s) 356
SatI GCNGC 3 cut(s) 52, 282, 297
ScrFI CCNGG 4 cut(s) 169, 187, 207, 268
SduI GDGCHC 1 cut(s) 167
SetI ASST 7 cut(s) 11, 28, 32, 129, 179, 211, 341
SfaNI GCATC 1 cut(s) 268
Sse9I AATT 1 cut(s) 64
SsiI CCGC 4 cut(s) 51, 54, 264, 284
SspMI CTAG 3 cut(s) 6, 99, 361
StyD4I CCNGG 4 cut(s) 167, 185, 205, 266
TaqI TCGA 1 cut(s) 357
TasI AATT 1 cut(s) 64
TauI GCSGC 1 cut(s) 54
TscAI CASTG 2 cut(s) 44, 332
TseI GCWGC 2 cut(s) 281, 296
TspRI CASTG 2 cut(s) 44, 332
XmiI GTMKAC 1 cut(s) 357
XspI CTAG 3 cut(s) 6, 99, 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.