RLG00000037029

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
87655986 .. 87656711
726 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000037029

Sequence Viewer

Length: 726 bp
ATGGTGCACATAGATGCTAGATTCGTGGTCGGTGTGGTTGGGAATGTAATTTCTGGCGGCCTTTTCCTCTCTCCAATTCCTACGTTCACACAAATATGGAGAAAAAAAGATGTGGAAGCTTTCGATCCAAAACCTTACCTTACAACAGTGTTGAACTGTTTGTTCTGGTGTTACTATGGATTGCCATTCGTGAATCCAAACAGCATTTTAGTTGTCACTATTAATGGAATTGGGCTATTTATAGAGCTCATGTATCTTACCATATTCTTCTATTATGCCGCAGCAAAAGGACGAAAGAGGGTTGCTATATACTTTATATGTGAACTTATTTTATTTGGGGCTTTGGTGGCTGCAACTATGTTGGCAATACCTGAGCATAAGATGGCGATAAATCGACGTTTGAGGGCTGTTGTAGTTGGTGTGATCTGTGATTTTTTCAATGTTCTCATGTATGGCTCTCCCTTATTCAACCTGAAAGATGTCATTAAAACTAAGAGTGTGAAATATATGCCATTCACTCTCCTAGTGGCTAACTTCCTAAATGGTTGTTGCTGGACATCCTATGCTCTTATTGGAAAAGTGGACTACTTCATTTTAATTAGCAATGGACTCGGTGCAATTTTTGGAGCAGTTCAATTGATGGTTTATGCAAGATACTACAAAACTACACCAAAAGATGAAGCTAGCAAGACTATTAATGAAGTGCAACTTTGTACTAACGTCTAA

Protein Analysis

242

Amino Acids

27.09

Weight (kDa)

9.19

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MtN3_slv PF03083 9 - 96 1.3e-21 Sugar efflux transporter for intercellular exchange
MtN3_slv PF03083 138 - 222 5.7e-22 Sugar efflux transporter for intercellular exchange
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000596)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G40260 AT5G40260
fragaria_vesca FvH4_4g13312 FvH4_6g50390 FvH4_6g50390 FvH4_6g50580 FvH4_7g10730
malus_domestica MD17G1035200.v1.1
prunus_persica Prupe.3G283400_v2.0.a1
pyrus_communis pycom17g03250
rosa_chinensis RchiOBHm_Chr1g0349441 RchiOBHm_Chr1g0359391 RchiOBHm_Chr1g0359411 RchiOBHm_Chr1g0359541 RchiOBHm_Chr1g0359551 RchiOBHm_Chr1g0360181 RchiOBHm_Chr2g0131641 RchiOBHm_Chr2g0171121 RchiOBHm_Chr4g0413611 RchiOBHm_Chr5g0028121 RchiOBHm_Chr5g0037121 RchiOBHm_Chr5g0083341 RchiOBHm_Chr7g0239371
rosa_laevigata RLG00000008206 RLG00000022004 RLG00000027823 RLG00000027873 RLG00000028548 RLG00000037029
rosa_multiflora Rmu_sc0001287.1_g000004 Rmu_sc0001444.1_g000014 Rmu_sc0002245.1_g000046 Rmu_sc0002495.1_g000008 Rmu_sc0025358.1_g000001 Rmu_ssc0000358.1_g000004 Rmu_ssc0000358.1_g000005 Rmu_ssc0000368.1_g000047
rosa_roxburghii Rroxscaffold_2G00080810 Rroxscaffold_4G00296320 Rroxscaffold_5G00357560
rosa_rugosa Rorug01G0203900 Rorug01G0270900 Rorug01G0271000 Rorug01G0272100 Rorug01G0275700 Rorug02G0553600 Rorug04G0121500 Rorug04G0121600 Rorug05G0104200 Rorug05G0104300 Rorug05G0484300
rosa_samantha Rh1AG221100 Rh1AG284300 Rh1AG284400 Rh1AG289400 Rh1CG206000 Rh1CG272400 Rh1DG216500 Rh1DG279300 Rh1DG279400 Rh1DG284500 Rh2AG627300 Rh2BG637200 Rh2DG648800 Rh2DG654400 Rh4CG192300 Rh4DG176500 Rh5AG533700 Rh5BG561400 Rh5DG570300 Rh7CG498900 Rh7DG467000
rosa_wichuraiana Rw1G018790 Rw1G025240 Rw1G025250 Rw1G025680 Rw2G028530 Rw2G051920 Rw4G015140 Rw5G049910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 57, 279
AclWI GGATC 1 cut(s) 119
AfaI GTAC 1 cut(s) 715
AgsI TTSAA 4 cut(s) 154, 439, 469, 635
AluBI AGCT 3 cut(s) 119, 247, 683
AluI AGCT 3 cut(s) 119, 247, 683
Alw21I GWGCWC 2 cut(s) 9, 249
Alw44I GTGCAC 1 cut(s) 5
AlwI GGATC 1 cut(s) 119
AoxI GGCC 1 cut(s) 58
ApaLI GTGCAC 1 cut(s) 5
ApeKI GCWGC 2 cut(s) 281, 350
AseI ATTAAT 2 cut(s) 222, 696
AsuNHI GCTAGC 1 cut(s) 683
BaeGI GKGCMC 1 cut(s) 9
BanII GRGCYC 1 cut(s) 249
Bbv12I GWGCWC 2 cut(s) 9, 249
BbvI GCAGC 2 cut(s) 293, 337
BccI CCATC 2 cut(s) 376, 634
BcgI CGANNNNNNTGC 2 cut(s) 592, 626
BfaI CTAG 3 cut(s) 18, 524, 684
BisI GCNGC 4 cut(s) 58, 279, 282, 351
BlsI GCNGC 4 cut(s) 59, 280, 283, 352
BmsI GCATC 1 cut(s) 4
BmtI GCTAGC 1 cut(s) 687
Bpu10I CCTNAGC 1 cut(s) 372
Bse3DI GCAATG 1 cut(s) 610
BseGI GGATG 1 cut(s) 557
BseMI GCAATG 1 cut(s) 610
BseMII CTCAG 1 cut(s) 363
BseSI GKGCMC 1 cut(s) 9
BseXI GCAGC 2 cut(s) 293, 337
BshFI GGCC 1 cut(s) 60
BsiHKAI GWGCWC 2 cut(s) 9, 249
BsnI GGCC 1 cut(s) 60
Bsp1286I GDGCHC 2 cut(s) 9, 249
Bsp143I GATC 2 cut(s) 124, 423
BspACI CCGC 2 cut(s) 57, 279
BspANI GGCC 1 cut(s) 60
BspCNI CTCAG 1 cut(s) 364
BspOI GCTAGC 1 cut(s) 687
BspPI GGATC 1 cut(s) 119
BsrDI GCAATG 1 cut(s) 610
BssMI GATC 2 cut(s) 124, 423
Bst4CI ACNGT 2 cut(s) 148, 158
BstC8I GCNNGC 1 cut(s) 685
BstDEI CTNAG 2 cut(s) 372, 492
BstF5I GGATG 1 cut(s) 557
BstKTI GATC 2 cut(s) 127, 426
BstMBI GATC 2 cut(s) 124, 423
BstMWI GCNNNNNNNGC 1 cut(s) 347
BstSLI GKGCMC 1 cut(s) 9
BstV1I GCAGC 2 cut(s) 293, 337
BsuRI GGCC 1 cut(s) 60
BtsCI GGATG 1 cut(s) 557
BtsIMutI CAGTG 1 cut(s) 153
Cac8I GCNNGC 1 cut(s) 685
Csp6I GTAC 1 cut(s) 714
CviAII CATG 2 cut(s) 250, 448
CviQI GTAC 1 cut(s) 714
DdeI CTNAG 2 cut(s) 372, 492
DpnI GATC 2 cut(s) 126, 425
DpnII GATC 2 cut(s) 124, 423
Ecl136II GAGCTC 1 cut(s) 247
Eco24I GRGCYC 1 cut(s) 249
Eco53kI GAGCTC 1 cut(s) 247
EcoICRI GAGCTC 1 cut(s) 247
EcoT38I GRGCYC 1 cut(s) 249
FaeI CATG 2 cut(s) 253, 451
FalI AAGNNNNNCTT 2 cut(s) 693, 725
FatI CATG 2 cut(s) 249, 447
Fnu4HI GCNGC 4 cut(s) 58, 279, 282, 351
FokI GGATG 1 cut(s) 544
FriOI GRGCYC 1 cut(s) 249
Fsp4HI GCNGC 4 cut(s) 58, 279, 282, 351
FspBI CTAG 3 cut(s) 18, 524, 684
GluI GCNGC 4 cut(s) 58, 279, 282, 351
HaeIII GGCC 1 cut(s) 60
Hin1II CATG 2 cut(s) 253, 451
HindIII AAGCTT 1 cut(s) 117
HinfI GANTC 3 cut(s) 21, 193, 609
Hpy166II GTNNAC 4 cut(s) 7, 87, 323, 583
Hpy188III TCNNGA 1 cut(s) 190
Hpy8I GTNNAC 4 cut(s) 7, 87, 323, 583
Hpy99I CGWCG 1 cut(s) 399
HpyCH4III ACNGT 2 cut(s) 148, 158
HpyCH4IV ACGT 3 cut(s) 83, 397, 720
HpyCH4V TGCA 5 cut(s) 7, 353, 617, 650, 706
HpyF10VI GCNNNNNNNGC 1 cut(s) 347
HpyF3I CTNAG 2 cut(s) 372, 492
HpySE526I ACGT 3 cut(s) 83, 397, 720
Hsp92II CATG 2 cut(s) 253, 451
Kzo9I GATC 2 cut(s) 124, 423
LmnI GCTCC 1 cut(s) 626
LpnPI CCDG 5 cut(s) 39, 151, 384, 485, 538
Lsp1109I GCAGC 2 cut(s) 293, 337
LweI GCATC 1 cut(s) 4
MaeI CTAG 3 cut(s) 18, 524, 684
MaeII ACGT 3 cut(s) 83, 397, 720
MaeIII GTNAC 2 cut(s) 170, 214
MalI GATC 2 cut(s) 126, 425
MboI GATC 2 cut(s) 124, 423
MboII GAAGA 1 cut(s) 259
MfeI CAATTG 1 cut(s) 635
MhlI GDGCHC 2 cut(s) 9, 249
MluCI AATT 6 cut(s) 48, 75, 228, 597, 618, 635
MlyI GAGTC 1 cut(s) 603
MnlI CCTC 3 cut(s) 77, 291, 396
MseI TTAA 4 cut(s) 222, 486, 596, 696
MslI CAYNNNNRTG 2 cut(s) 12, 94
MunI CAATTG 1 cut(s) 635
MwoI GCNNNNNNNGC 1 cut(s) 347
NdeII GATC 2 cut(s) 124, 423
NheI GCTAGC 1 cut(s) 683
NlaIII CATG 2 cut(s) 253, 451
NmuCI GTSAC 1 cut(s) 214
PfeI GAWTC 2 cut(s) 21, 193
PkrI GCNGC 4 cut(s) 59, 280, 283, 352
PleI GAGTC 1 cut(s) 603
PpsI GAGTC 1 cut(s) 603
PshBI ATTAAT 2 cut(s) 222, 696
Psp124BI GAGCTC 1 cut(s) 249
RsaI GTAC 1 cut(s) 715
RsaNI GTAC 1 cut(s) 714
RseI CAYNNNNRTG 2 cut(s) 12, 94
SacI GAGCTC 1 cut(s) 249
SaqAI TTAA 4 cut(s) 222, 486, 596, 696
SatI GCNGC 4 cut(s) 58, 279, 282, 351
Sau3AI GATC 2 cut(s) 124, 423
SchI GAGTC 1 cut(s) 603
SduI GDGCHC 2 cut(s) 9, 249
SfaNI GCATC 1 cut(s) 4
SmiMI CAYNNNNRTG 2 cut(s) 12, 94
Sse9I AATT 6 cut(s) 48, 75, 228, 597, 618, 635
SsiI CCGC 2 cut(s) 57, 279
SspMI CTAG 3 cut(s) 18, 524, 684
SstI GAGCTC 1 cut(s) 249
TaaI ACNGT 2 cut(s) 148, 158
TaiI ACGT 3 cut(s) 86, 400, 723
TaqI TCGA 2 cut(s) 123, 394
TasI AATT 6 cut(s) 48, 75, 228, 597, 618, 635
TatI WGTACW 1 cut(s) 713
TauI GCSGC 2 cut(s) 60, 281
TfiI GAWTC 2 cut(s) 21, 193
Tru1I TTAA 4 cut(s) 222, 486, 596, 696
Tru9I TTAA 4 cut(s) 222, 486, 596, 696
TscAI CASTG 1 cut(s) 153
TseFI GTSAC 1 cut(s) 214
TseI GCWGC 2 cut(s) 281, 350
Tsp45I GTSAC 1 cut(s) 214
TspDTI ATGAA 3 cut(s) 580, 693, 714
TspRI CASTG 1 cut(s) 153
VneI GTGCAC 1 cut(s) 5
VspI ATTAAT 2 cut(s) 222, 696
XspI CTAG 3 cut(s) 18, 524, 684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.