Rmu_sc0004191.1_g000059

aspartic-type endopeptidase activity

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004191.1
Physical Location & Seq
Forward (+)
248001 .. 248318
318 bp
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UTR
Exon/CDS
Intron
Rmu_sc0004191.1_g000059.1.cds

Sequence Viewer

Length: 318 bp
atgttgcttacatattcctctgtgactacgatggctgggccatcaggattagttcaaggacatggaatggcccaattccttttgccaaatggcaccttgattaatgttgcagaagctctctacgctcctaaggcaaatcgattcttattgatccgagccaacggattccatgcggaaacgcatcttgagaacggaaaagagttcctttgccatacctctaatgattgtggacgaaagcacatcttagagaagcttatgtgtcaatatagtggactttatgtcactaccattcgacctattgaatccacagtgttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.57

Weight (kDa)

7.79

Isoelectric Point (pI)

26.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 92
AciI CCGC 1 cut(s) 173
AclWI GGATC 1 cut(s) 145
AgsI TTSAA 2 cut(s) 56, 302
AhdI GACNNNNNGTC 1 cut(s) 278
AluBI AGCT 2 cut(s) 116, 253
AluI AGCT 2 cut(s) 116, 253
AlwI GGATC 1 cut(s) 145
AoxI GGCC 2 cut(s) 38, 69
AseI ATTAAT 1 cut(s) 102
AspS9I GGNCC 2 cut(s) 38, 70
AxyI CCTNAGG 1 cut(s) 129
BanI GGYRCC 1 cut(s) 92
BccI CCATC 2 cut(s) 25, 49
BmeRI GACNNNNNGTC 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 38, 70
BmiI GGNNCC 1 cut(s) 94
BmsI GCATC 1 cut(s) 190
BpuEI CTTGAG 1 cut(s) 206
Bsa29I ATCGAT 1 cut(s) 139
Bse21I CCTNAGG 1 cut(s) 129
BseCI ATCGAT 1 cut(s) 139
BseYI CCCAGC 1 cut(s) 35
BshFI GGCC 2 cut(s) 40, 71
BshNI GGYRCC 1 cut(s) 92
BshVI ATCGAT 1 cut(s) 139
BsnI GGCC 2 cut(s) 40, 71
Bsp143I GATC 1 cut(s) 150
BspACI CCGC 1 cut(s) 173
BspANI GGCC 2 cut(s) 40, 71
BspDI ATCGAT 1 cut(s) 139
BspLI GGNNCC 1 cut(s) 94
BspPI GGATC 1 cut(s) 145
BspT107I GGYRCC 1 cut(s) 92
BssMI GATC 1 cut(s) 150
Bst4CI ACNGT 1 cut(s) 310
BstDEI CTNAG 2 cut(s) 129, 244
BstKTI GATC 1 cut(s) 153
BstMBI GATC 1 cut(s) 150
BstMWI GCNNNNNNNGC 2 cut(s) 122, 131
Bsu15I ATCGAT 1 cut(s) 139
Bsu36I CCTNAGG 1 cut(s) 129
BsuRI GGCC 2 cut(s) 40, 71
BsuTUI ATCGAT 1 cut(s) 139
BtsIMutI CAGTG 1 cut(s) 315
Cfr13I GGNCC 2 cut(s) 38, 70
ClaI ATCGAT 1 cut(s) 139
CviAII CATG 2 cut(s) 62, 170
CviJI RGCY 6 cut(s) 35, 40, 71, 116, 158, 253
CviKI_1 RGCY 6 cut(s) 35, 40, 71, 116, 158, 253
DdeI CTNAG 2 cut(s) 129, 244
DpnI GATC 1 cut(s) 152
DpnII GATC 1 cut(s) 150
DriI GACNNNNNGTC 1 cut(s) 278
Eam1105I GACNNNNNGTC 1 cut(s) 278
Eco81I CCTNAGG 1 cut(s) 129
FaeI CATG 2 cut(s) 65, 173
FaiI YATR 7 cut(s) 13, 63, 171, 213, 257, 267, 279
FalI AAGNNNNNCTT 4 cut(s) 189, 221, 227, 259
FatI CATG 2 cut(s) 61, 169
GsaI CCCAGC 1 cut(s) 39
HaeIII GGCC 2 cut(s) 40, 71
Hin1II CATG 2 cut(s) 65, 173
HindIII AAGCTT 1 cut(s) 251
HinfI GANTC 3 cut(s) 141, 165, 302
Hpy166II GTNNAC 2 cut(s) 230, 272
Hpy188I TCNGA 1 cut(s) 155
Hpy188III TCNNGA 2 cut(s) 45, 185
Hpy8I GTNNAC 2 cut(s) 230, 272
HpyCH4III ACNGT 1 cut(s) 310
HpyCH4V TGCA 1 cut(s) 110
HpyF10VI GCNNNNNNNGC 2 cut(s) 122, 131
HpyF3I CTNAG 2 cut(s) 129, 244
Hsp92II CATG 2 cut(s) 65, 173
Kzo9I GATC 1 cut(s) 150
LmnI GCTCC 1 cut(s) 130
LpnPI CCDG 2 cut(s) 21, 30
LweI GCATC 1 cut(s) 190
MaeIII GTNAC 2 cut(s) 22, 280
MalI GATC 1 cut(s) 152
MboI GATC 1 cut(s) 150
MluCI AATT 1 cut(s) 74
MnlI CCTC 2 cut(s) 28, 226
MseI TTAA 1 cut(s) 102
MwoI GCNNNNNNNGC 2 cut(s) 122, 131
NdeII GATC 1 cut(s) 150
NlaIII CATG 2 cut(s) 65, 173
NlaIV GGNNCC 1 cut(s) 94
NmuCI GTSAC 2 cut(s) 22, 280
PfeI GAWTC 3 cut(s) 141, 165, 302
PshBI ATTAAT 1 cut(s) 102
PspFI CCCAGC 1 cut(s) 35
PspN4I GGNNCC 1 cut(s) 94
PspPI GGNCC 2 cut(s) 38, 70
SaqAI TTAA 1 cut(s) 102
Sau3AI GATC 1 cut(s) 150
Sau96I GGNCC 2 cut(s) 38, 70
SetI ASST 5 cut(s) 98, 118, 218, 255, 298
SfaNI GCATC 1 cut(s) 190
SgeI CNNG 8 cut(s) 48, 57, 68, 74, 109, 167, 182, 197
SmlI CTYRAG 1 cut(s) 185
SmoI CTYRAG 1 cut(s) 185
Sse9I AATT 1 cut(s) 74
SsiI CCGC 1 cut(s) 173
TaaI ACNGT 1 cut(s) 310
TaqI TCGA 2 cut(s) 139, 292
TasI AATT 1 cut(s) 74
TfiI GAWTC 3 cut(s) 141, 165, 302
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TscAI CASTG 1 cut(s) 315
TseFI GTSAC 2 cut(s) 22, 280
Tsp45I GTSAC 2 cut(s) 22, 280
TspGWI ACGGA 2 cut(s) 177, 207
TspRI CASTG 1 cut(s) 315
VspI ATTAAT 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.