Rorug01G0115200

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
20300583 .. 20306143
5561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0115200.1

Sequence Viewer

Length: 2865 bp
ATGCTCCCTTGTGATCTAAATTGTGGAAATAAATTCTCAGTTGAAGAGCAAGCTTCATTAGTCTGGAAGCTTTTGAGCAGCATCCCCACGAATATAGTGGCTAAACTCATTCCCTGGCTAGCGTCCTCCTTGTCACTTGATGAATGTCAGCATCTGTACAAGTGCTTAAGTATGATAGTACCAGCCGAGAAGCTTCTCCAAGAGGTCATTTTCACCTGGATGGAAGGGAAAGACAATTGTGCTGGCATGACAGCTGATCGAAAAGATGATACAAGTTGTGCATATGAGTTCAATGGGGTGTATCCAATAGATGATACGTTGCTTTGGCATCATGCTATTGAGACAGAGTTGAATGAAACACTTGCGGAAGAGAAGAAGATGTCTATATCTGGAGATGTTATTAATTATGATTTACTGGCTTTCTATGACAGGCTGCAATTTATTGCTGAAATTTGCATGTTTCACAGTATTGCTAAGGAAACGGTTCTATATCCTGCAGTGTATGGAGAAATTTCAATTTTCCATGAGCACAGAAATGAAGTAAATCTAACCAATGAGTTTAGGTGTTTGCTCGGAAGTTTAAAAAGTGCATCAACAATTCCTTCCACAGCTGCTGAATTTCATTCAAAGATATGCTCCCGTGCTGATCAAATAATGAAAACTTTAAAGGCGCATTTCCATGATGAGGAAGTTGAGGTACTTCCACTTGTTCGAAAGCACTTGAGCATTAAAAGACAACAGGAAGTTCTGCATCAGAGTTTGTGTGTGATGCCCTTGAAACTAATTGAGCGTGTCTTGCCATGGCTGGTAAAGTCATTGACTGCAAATGAAGCCCAGAATTTTGTCAATAACATGCAGTTGGCAGCTCCAGCATCAGATATCGCACTGGTGCAGCTCTTTTGTGGTTGGGCTAGCAAGGCTTCTAATGACTGCTTATGCTCATCTAGTTCCTTGCATATCAACTCTATGTCACCATCACATTCAGTTTGTGAAAAATTCAATAGCTGTTCCACCACTGGAATACCTGCACAACCAATAGATGTTGTTTTTAAAGTTCATAAGGCCATACGCCGTCACTTGGAATATCTAGACATTGAATCTGAAAGGCTTAGTAACTGTGATGAAATATTTCTTCAGCAGTTCATTGAAAGTTTCTGTTTGTTATGGGGCTTATATAGAGCTCATAGTAATGCAGAGGATTTTGTATTGTATCCGGCAATGGAATCCAGAGACGCACTTCAAAATGTAAGTCACTCCTACACACTTGATAATAAGCAAGAGGAAGATGCATTTGAAAATATTTCAGGTGTTCTTCTTGAGCTTTCTCACCTTCACAGAGGTACAAGAGCTGGTGCCCCCATAAGTGAATGTGTGGGAAAGTACTATGAGCTGGCAAACAAGCTTCGAATAATGTTCATGTCGCTAAGAATGATGGTAGATGAGCACATGTACCGGGAAGAGCTTGAGCTGTGGCCATTATTTGGAGCACACTTCTCTGTGGAGGAGCAAAACAAAATGATCGGTTTCATACTGGGGACTACAGGTGCTGAAGTTCTCCAATCTATGTTACCATGGGTTACTTCTGCACTTACTGAGGATGAACAGAGTAAAATGATGGATACCTTCAAGAATGTTACAAAAAATACAATGTTCAAGGAGTGGCTTAGTGAATGCGGGAAAGGAAGCTCACTGTCAACTCTACCGCCTAAACCAGAAACTAGCATTTTCATAAAAGGTACTGGATTTGAAGAAAGCCATCACCAAATTGATCATACTTTCAACTCTCATACGCGGAATAACTTGAAGCATCAAATGACTAGTTACTGGATTGCTGCTCAGCAGAGTTTAACTATAGCAATAGCAGTGAATAGTTCAAATAGTGAACAGTTAGGGGGACTGTCACCAACGTTTCGAGATCATGAGAAAACAGTGTATGGCTGCCAGCATTACAAGAGAAGCTGCAAACTCCTAGCTGCTTGCTGCGGCAAACTGTTCACTTGTAGATTTTGCCATGACATTATGAGCGACCACCCAATGGATAGGAAAGCAACATCCAAAATGATGTGTATGAGCTGTCTTAATATTCAGCCAGTTGGGTCAGTATGCTCGACAGCTTCTTGCAATGGATTTCCAATGGCAAAATATTATTGTAATATTTGCAACCTCTTTGATGATGACAGGAATGTCTACCACTGTCCATTTTGCAACTTATGCCGAGTAGGGAAGGGCCTTGGCATTGATTATTTTCACTGCATGTCGTGCAATTGTTGCATGGGGATGGCTTCGGTGAACCACAAGTGCCAGGAGAAATGTCTAGAAACCAACTGCCCTATCTGCAATGAGTTCTTATTCACATCAAGTACAAGAATCAAAGCTTTACCATGTGGCCATTGTATGCATTTAGCTTGCTTCAAGACTTGCACTCAGAGCAACAGTCAATACACTTGTCCAGTTTGCAGCAAATCTTCAGGAGCTACGATGATGACATCAACTCAATCCTCACTACTTGTGGATGGTGATGAGACCATGGAATTTTATAGCTATGACCAAACAACTGAAATGACTTCATGCACTGATATTAATCCTGAAGGGAGATTTTTCATGCGCACGAGCTTCTGGGTAAATATTTTATATCAGCTTGTCTTATGGTTTGAACACCTTAATGGAAGACTAGTTGTACCAAGATTCCTGCAAAGATTAAAAAGGGGATTGGAGAATGGAGTAGCAGGACAGAAGGCTAAAGAGAGGTGTGTGTTGTGTTGTGTGGTGCTCTGCGGTCTGGTGTTGTTTTGTGTCTTAAGTACTCTTCTAATTTTGCTTGGGTTCAAAGCATTAGGAAGAAACAAGTACATTCAACTATTGTAG

Protein Analysis

954

Amino Acids

107.89

Weight (kDa)

6.1

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CHY PF05495 647 - 715 9e-18 CHY zinc finger
zf-RING_2 PF13639 775 - 819 2.5e-06 Ring finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2183
Acc16I TGCGCA 1 cut(s) 2606
Acc36I ACCTGC 1 cut(s) 1033
AccB1I GGYRCC 1 cut(s) 1352
AccB7I CCANNNNNTGG 2 cut(s) 1481, 2035
AccI GTMKAC 1 cut(s) 2187
AccII CGCG 1 cut(s) 1792
AciI CCGC 6 cut(s) 365, 1674, 1703, 1792, 1983, 2775
AclI AACGTT 1 cut(s) 1907
AcoI YGGCCR 2 cut(s) 1472, 2386
AcsI RAATTY 7 cut(s) 32, 450, 510, 617, 838, 995, 2531
AcuI CTGAAG 4 cut(s) 1118, 1569, 2451, 2607
AfiI CCNNNNNNNGG 4 cut(s) 685, 1078, 1481, 2035
AflII CTTAAG 2 cut(s) 166, 2797
AflIII ACRYGT 1 cut(s) 1446
AhlI ACTAGT 2 cut(s) 1817, 2671
AjnI CCWGG 3 cut(s) 113, 215, 2301
Alw21I GWGCWC 5 cut(s) 531, 1183, 1446, 1489, 2772
Alw26I GTCTC 3 cut(s) 335, 1224, 2516
AlwNI CAGNNNCTG 3 cut(s) 154, 614, 1547
AoxI GGCC 4 cut(s) 1062, 1472, 2227, 2386
ApoI RAATTY 7 cut(s) 32, 450, 510, 617, 838, 995, 2531
ArsI GACNNNNNNTTYG 2 cut(s) 1234, 1266
AseI ATTAAT 2 cut(s) 402, 2580
Asp700I GAANNNNTTC 2 cut(s) 483, 1128
AspLEI GCGC 2 cut(s) 673, 2607
AspS9I GGNCC 1 cut(s) 2227
AsuC2I CCSGG 1 cut(s) 1454
AsuHPI GGTGA 7 cut(s) 205, 963, 1319, 1751, 1893, 2299, 2528
AsuII TTCGAA 2 cut(s) 712, 1405
AsuNHI GCTAGC 2 cut(s) 118, 911
BaeGI GKGCMC 1 cut(s) 1357
BalI TGGCCA 2 cut(s) 1474, 2388
BanI GGYRCC 1 cut(s) 1352
BanII GRGCYC 1 cut(s) 1183
BarI GAAGNNNNNNTAC 2 cut(s) 681, 713
BauI CACGAG 1 cut(s) 2608
BbsI GAAGAC 1 cut(s) 2674
Bbv12I GWGCWC 5 cut(s) 531, 1183, 1446, 1489, 2772
BccI CCATC 7 cut(s) 214, 982, 1426, 1609, 1764, 2272, 2507
BceAI ACGGC 1 cut(s) 1056
BciT130I CCWGG 3 cut(s) 115, 217, 2303
BciVI GTATCC 3 cut(s) 312, 1221, 1612
BclI TGATCA 2 cut(s) 646, 1768
BcnI CCSGG 1 cut(s) 1454
BcoDI GTCTC 3 cut(s) 335, 1224, 2516
BcuI ACTAGT 2 cut(s) 1817, 2671
BfaI CTAG 9 cut(s) 119, 912, 945, 1088, 1719, 1818, 1970, 2315, 2672
BfmI CTRYAG 3 cut(s) 495, 1539, 1851
BfrI CTTAAG 2 cut(s) 166, 2797
BfuAI ACCTGC 1 cut(s) 1033
BfuI GTATCC 3 cut(s) 312, 1221, 1612
BlpI GCTNAGC 1 cut(s) 1836
BmcAI AGTACT 2 cut(s) 1382, 2803
Bme1390I CCNGG 4 cut(s) 115, 217, 1454, 2303
BmgT120I GGNCC 1 cut(s) 2227
BmiI GGNNCC 1 cut(s) 1354
BmrFI CCNGG 4 cut(s) 115, 217, 1454, 2303
BmrI ACTGGG 1 cut(s) 1541
BmsI GCATC 9 cut(s) 90, 160, 337, 599, 759, 760, 881, 1276, 1816
BmtI GCTAGC 2 cut(s) 122, 915
BmuI ACTGGG 1 cut(s) 1541
BpiI GAAGAC 1 cut(s) 2674
BpmI CTGGAG 2 cut(s) 411, 852
Bpu10I CCTNAGC 1 cut(s) 474
Bpu1102I GCTNAGC 1 cut(s) 1836
Bpu14I TTCGAA 2 cut(s) 712, 1405
BpuEI CTTGAG 3 cut(s) 742, 1337, 1484
BpuMI CCSGG 1 cut(s) 1454
BsaBI GATNNNNATC 1 cut(s) 2580
BsaI GGTCTC 1 cut(s) 2516
BsaJI CCNNGG 5 cut(s) 113, 800, 1571, 2230, 2526
Bsc4I CCNNNNNNNGG 4 cut(s) 685, 1078, 1481, 2035
Bse1I ACTGG 8 cut(s) 420, 891, 1021, 1536, 1744, 1829, 2090, 2450
Bse3DI GCAATG 3 cut(s) 1224, 2128, 2344
Bse8I GATNNNNATC 1 cut(s) 2580
BseBI CCWGG 3 cut(s) 115, 217, 2303
BseDI CCNNGG 5 cut(s) 113, 800, 1571, 2230, 2526
BseGI GGATG 6 cut(s) 81, 225, 1603, 2051, 2283, 2518
BseJI GATNNNNATC 1 cut(s) 2580
BseLI CCNNNNNNNGG 4 cut(s) 685, 1078, 1481, 2035
BseMI GCAATG 3 cut(s) 1224, 2128, 2344
BseMII CTCAG 4 cut(s) 51, 1584, 1850, 2438
BseNI ACTGG 8 cut(s) 420, 891, 1021, 1536, 1744, 1829, 2090, 2450
BseRI GAGGAG 1 cut(s) 1517
BseSI GKGCMC 1 cut(s) 1357
BsgI GTGCAG 3 cut(s) 911, 1011, 1569
Bsh1236I CGCG 1 cut(s) 1792
BshFI GGCC 4 cut(s) 1064, 1474, 2229, 2388
BshNI GGYRCC 1 cut(s) 1352
BsiHKAI GWGCWC 5 cut(s) 531, 1183, 1446, 1489, 2772
BsiSI CCGG 2 cut(s) 1214, 1453
BslFI GGGAC 2 cut(s) 1549, 1908
BslI CCNNNNNNNGG 4 cut(s) 685, 1078, 1481, 2035
BsmAI GTCTC 3 cut(s) 335, 1224, 2516
BsmBI CGTCTC 1 cut(s) 1224
BsmFI GGGAC 2 cut(s) 1549, 1908
BsmI GAATGC 1 cut(s) 1676
BsnI GGCC 4 cut(s) 1064, 1474, 2229, 2388
Bso31I GGTCTC 1 cut(s) 2516
Bsp119I TTCGAA 2 cut(s) 712, 1405
Bsp1286I GDGCHC 6 cut(s) 531, 1183, 1357, 1446, 1489, 2772
Bsp1407I TGTACA 1 cut(s) 156
Bsp143I GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
Bsp1720I GCTNAGC 1 cut(s) 1836
Bsp19I CCATGG 3 cut(s) 800, 1571, 2526
BspACI CCGC 6 cut(s) 365, 1674, 1703, 1792, 1983, 2775
BspANI GGCC 4 cut(s) 1064, 1474, 2229, 2388
BspCNI CTCAG 4 cut(s) 50, 1585, 1849, 2437
BspFNI CGCG 1 cut(s) 1792
BspHI TCATGA 1 cut(s) 1918
BspLI GGNNCC 1 cut(s) 1354
BspMAI CTGCAG 1 cut(s) 499
BspMI ACCTGC 1 cut(s) 1033
BspOI GCTAGC 2 cut(s) 122, 915
BspQI GCTCTTC 2 cut(s) 39, 1452
BspT104I TTCGAA 2 cut(s) 712, 1405
BspT107I GGYRCC 1 cut(s) 1352
BspTI CTTAAG 2 cut(s) 166, 2797
BspTNI GGTCTC 1 cut(s) 2516
BsrDI GCAATG 3 cut(s) 1224, 2128, 2344
BsrGI TGTACA 1 cut(s) 156
BsrI ACTGG 8 cut(s) 420, 891, 1021, 1536, 1744, 1829, 2090, 2450
BssECI CCNNGG 5 cut(s) 113, 800, 1571, 2230, 2526
BssMI GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
BssSI CACGAG 1 cut(s) 2608
BssT1I CCWWGG 4 cut(s) 800, 1571, 2230, 2526
Bst2BI CACGAG 1 cut(s) 2608
Bst2UI CCWGG 3 cut(s) 115, 217, 2303
Bst6I CTCTTC 4 cut(s) 39, 363, 1452, 2811
BstAFI CTTAAG 2 cut(s) 166, 2797
BstAPI GCANNNNNTGC 3 cut(s) 2211, 2259, 2268
BstAUI TGTACA 1 cut(s) 156
BstBI TTCGAA 2 cut(s) 712, 1405
BstC8I GCNNGC 8 cut(s) 51, 120, 244, 913, 1392, 1943, 1978, 2407
BstDEI CTNAG 8 cut(s) 37, 474, 1109, 1424, 1593, 1664, 1836, 2424
BstDSI CCRYGG 3 cut(s) 800, 1571, 2526
BstF5I GGATG 6 cut(s) 81, 225, 1603, 2051, 2283, 2518
BstFNI CGCG 1 cut(s) 1792
BstHHI GCGC 2 cut(s) 673, 2607
BstKTI GATC 6 cut(s) 16, 259, 649, 1521, 1771, 1918
BstMAI GTCTC 3 cut(s) 335, 1224, 2516
BstMBI GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
BstMWI GCNNNNNNNGC 9 cut(s) 796, 830, 869, 917, 2211, 2259, 2268, 2334, 2427
BstNI CCWGG 3 cut(s) 115, 217, 2303
BstNSI RCATGY 4 cut(s) 460, 856, 1450, 2257
BstSCI CCNGG 4 cut(s) 113, 215, 1452, 2301
BstSFI CTRYAG 3 cut(s) 495, 1539, 1851
BstSLI GKGCMC 1 cut(s) 1357
BstUI CGCG 1 cut(s) 1792
BstV2I GAAGAC 1 cut(s) 2674
BsuI GTATCC 3 cut(s) 312, 1221, 1612
BsuRI GGCC 4 cut(s) 1064, 1474, 2229, 2388
BtgI CCRYGG 3 cut(s) 800, 1571, 2526
BtsCI GGATG 6 cut(s) 81, 225, 1603, 2051, 2283, 2518
BtsI GCAGTG 3 cut(s) 504, 1869, 2248
BtsIMutI CAGTG 9 cut(s) 504, 884, 1014, 1688, 1869, 1935, 2191, 2248, 2571
BveI ACCTGC 1 cut(s) 1033
Cac8I GCNNGC 8 cut(s) 51, 120, 244, 913, 1392, 1943, 1978, 2407
CaiI CAGNNNCTG 3 cut(s) 154, 614, 1547
CciI TCATGA 1 cut(s) 1918
CfoI GCGC 2 cut(s) 673, 2607
Cfr13I GGNCC 1 cut(s) 2227
CseI GACGC 2 cut(s) 111, 1241
DdeI CTNAG 8 cut(s) 37, 474, 1109, 1424, 1593, 1664, 1836, 2424
DpnI GATC 6 cut(s) 15, 258, 648, 1520, 1770, 1917
DpnII GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
DraI TTTAAA 3 cut(s) 582, 666, 1051
DrdI GACNNNNNNGTC 1 cut(s) 2183
DseDI GACNNNNNNGTC 1 cut(s) 2183
EaeI YGGCCR 2 cut(s) 1472, 2386
Eam1104I CTCTTC 4 cut(s) 39, 363, 1452, 2811
EarI CTCTTC 4 cut(s) 39, 363, 1452, 2811
Ecl136II GAGCTC 1 cut(s) 1181
Eco130I CCWWGG 4 cut(s) 800, 1571, 2230, 2526
Eco24I GRGCYC 1 cut(s) 1183
Eco31I GGTCTC 1 cut(s) 2516
Eco32I GATATC 1 cut(s) 880
Eco53kI GAGCTC 1 cut(s) 1181
Eco57I CTGAAG 4 cut(s) 1118, 1569, 2451, 2607
EcoICRI GAGCTC 1 cut(s) 1181
EcoO109I RGGNCCY 1 cut(s) 2227
EcoRII CCWGG 3 cut(s) 113, 215, 2301
EcoRV GATATC 1 cut(s) 880
EcoT14I CCWWGG 4 cut(s) 800, 1571, 2230, 2526
EcoT22I ATGCAT 2 cut(s) 1291, 2400
EcoT38I GRGCYC 1 cut(s) 1183
ErhI CCWWGG 4 cut(s) 800, 1571, 2230, 2526
Esp3I CGTCTC 1 cut(s) 1224
FaqI GGGAC 2 cut(s) 1549, 1908
FauI CCCGC 1 cut(s) 1667
FauNDI CATATG 1 cut(s) 283
FbaI TGATCA 2 cut(s) 646, 1768
FblI GTMKAC 1 cut(s) 2187
FokI GGATG 6 cut(s) 68, 232, 1610, 2038, 2290, 2525
FriOI GRGCYC 1 cut(s) 1183
FspAI RTGCGCAY 1 cut(s) 2606
FspBI CTAG 9 cut(s) 119, 912, 945, 1088, 1719, 1818, 1970, 2315, 2672
FspI TGCGCA 1 cut(s) 2606
GlaI GCGC 2 cut(s) 672, 2606
GsuI CTGGAG 2 cut(s) 411, 852
HaeIII GGCC 4 cut(s) 1064, 1474, 2229, 2388
HapII CCGG 2 cut(s) 1214, 1453
HgaI GACGC 2 cut(s) 111, 1241
HhaI GCGC 2 cut(s) 673, 2607
Hin6I GCGC 2 cut(s) 671, 2605
HinP1I GCGC 2 cut(s) 671, 2605
HincII GTYRAC 1 cut(s) 1695
HindII GTYRAC 1 cut(s) 1695
HindIII AAGCTT 5 cut(s) 51, 68, 191, 1400, 2373
HinfI GANTC 4 cut(s) 1097, 1223, 2367, 2685
HpaII CCGG 2 cut(s) 1214, 1453
HphI GGTGA 7 cut(s) 205, 963, 1319, 1751, 1893, 2299, 2528
Hpy166II GTNNAC 5 cut(s) 1695, 1883, 1995, 2188, 2290
Hpy188I TCNGA 5 cut(s) 575, 756, 877, 1102, 2427
Hpy8I GTNNAC 5 cut(s) 1695, 1883, 1995, 2188, 2290
HpyAV CCTTC 7 cut(s) 218, 612, 1340, 1633, 2218, 2582, 2728
HpyCH4IV ACGT 2 cut(s) 317, 1907
HpyF10VI GCNNNNNNNGC 9 cut(s) 796, 830, 869, 917, 2211, 2259, 2268, 2334, 2427
HpyF3I CTNAG 8 cut(s) 37, 474, 1109, 1424, 1593, 1664, 1836, 2424
HpySE526I ACGT 2 cut(s) 317, 1907
HspAI GCGC 2 cut(s) 671, 2605
Ksp22I TGATCA 2 cut(s) 646, 1768
Kzo9I GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
LguI GCTCTTC 2 cut(s) 39, 1452
LmnI GCTCC 6 cut(s) 9, 641, 871, 1484, 1504, 2471
LweI GCATC 9 cut(s) 90, 160, 337, 599, 759, 760, 881, 1276, 1816
MaeI CTAG 9 cut(s) 119, 912, 945, 1088, 1719, 1818, 1970, 2315, 2672
MaeII ACGT 2 cut(s) 317, 1907
MalI GATC 6 cut(s) 15, 258, 648, 1520, 1770, 1917
MboI GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
MfeI CAATTG 2 cut(s) 235, 2263
MhlI GDGCHC 6 cut(s) 531, 1183, 1357, 1446, 1489, 2772
MlsI TGGCCA 2 cut(s) 1474, 2388
MluNI TGGCCA 2 cut(s) 1474, 2388
Mox20I TGGCCA 2 cut(s) 1474, 2388
Mph1103I ATGCAT 2 cut(s) 1291, 2400
MroXI GAANNNNTTC 2 cut(s) 483, 1128
MscI TGGCCA 2 cut(s) 1474, 2388
MslI CAYNNNNRTG 6 cut(s) 218, 534, 678, 1188, 2276, 2661
Msp20I TGGCCA 2 cut(s) 1474, 2388
MspA1I CMGCKG 2 cut(s) 254, 611
MspCI CTTAAG 2 cut(s) 166, 2797
MspI CCGG 2 cut(s) 1214, 1453
MspR9I CCNGG 4 cut(s) 115, 217, 1454, 2303
MunI CAATTG 2 cut(s) 235, 2263
Mva1269I GAATGC 1 cut(s) 1676
MvaI CCWGG 3 cut(s) 115, 217, 2303
MvnI CGCG 1 cut(s) 1792
MwoI GCNNNNNNNGC 9 cut(s) 796, 830, 869, 917, 2211, 2259, 2268, 2334, 2427
NciI CCSGG 1 cut(s) 1454
NcoI CCATGG 3 cut(s) 800, 1571, 2526
NdeI CATATG 1 cut(s) 283
NdeII GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
NheI GCTAGC 2 cut(s) 118, 911
NlaIV GGNNCC 1 cut(s) 1354
NmeAIII GCCGAG 2 cut(s) 211, 2240
NmuCI GTSAC 5 cut(s) 132, 969, 1073, 1250, 1899
NsbI TGCGCA 1 cut(s) 2606
NsiI ATGCAT 2 cut(s) 1291, 2400
NspI RCATGY 4 cut(s) 460, 856, 1450, 2257
NspV TTCGAA 2 cut(s) 712, 1405
PagI TCATGA 1 cut(s) 1918
PciI ACATGT 1 cut(s) 1446
PciSI GCTCTTC 2 cut(s) 39, 1452
PctI GAATGC 1 cut(s) 1676
PdmI GAANNNNTTC 2 cut(s) 483, 1128
PfeI GAWTC 4 cut(s) 1097, 1223, 2367, 2685
PflMI CCANNNNNTGG 2 cut(s) 1481, 2035
PscI ACATGT 1 cut(s) 1446
PshBI ATTAAT 2 cut(s) 402, 2580
Psp124BI GAGCTC 1 cut(s) 1183
Psp1406I AACGTT 1 cut(s) 1907
Psp6I CCWGG 3 cut(s) 113, 215, 2301
PspGI CCWGG 3 cut(s) 113, 215, 2301
PspN4I GGNNCC 1 cut(s) 1354
PspPI GGNCC 1 cut(s) 2227
PstI CTGCAG 1 cut(s) 499
PstNI CAGNNNCTG 3 cut(s) 154, 614, 1547
PvuII CAGCTG 2 cut(s) 254, 611
RseI CAYNNNNRTG 6 cut(s) 218, 534, 678, 1188, 2276, 2661
SacI GAGCTC 1 cut(s) 1183
SapI GCTCTTC 2 cut(s) 39, 1452
Sau3AI GATC 6 cut(s) 13, 256, 646, 1518, 1768, 1915
Sau96I GGNCC 1 cut(s) 2227
ScaI AGTACT 2 cut(s) 1382, 2803
ScrFI CCNGG 4 cut(s) 115, 217, 1454, 2303
SduI GDGCHC 6 cut(s) 531, 1183, 1357, 1446, 1489, 2772
SfaNI GCATC 9 cut(s) 90, 160, 337, 599, 759, 760, 881, 1276, 1816
SfcI CTRYAG 3 cut(s) 495, 1539, 1851
SfuI TTCGAA 2 cut(s) 712, 1405
SmiMI CAYNNNNRTG 6 cut(s) 218, 534, 678, 1188, 2276, 2661
SmlI CTYRAG 5 cut(s) 166, 721, 1316, 1463, 2797
SmoI CTYRAG 5 cut(s) 166, 721, 1316, 1463, 2797
SpeI ACTAGT 2 cut(s) 1817, 2671
SsiI CCGC 6 cut(s) 365, 1674, 1703, 1792, 1983, 2775
SspI AATATT 6 cut(s) 1128, 1300, 2083, 2144, 2155, 2626
SspMI CTAG 9 cut(s) 119, 912, 945, 1088, 1719, 1818, 1970, 2315, 2672
SstI GAGCTC 1 cut(s) 1183
StyD4I CCNGG 4 cut(s) 113, 215, 1452, 2301
StyI CCWWGG 4 cut(s) 800, 1571, 2230, 2526
TaiI ACGT 2 cut(s) 320, 1910
TaqI TCGA 5 cut(s) 259, 712, 1405, 1912, 2108
TatI WGTACW 5 cut(s) 156, 1380, 2360, 2801, 2847
TauI GCSGC 1 cut(s) 1986
TfiI GAWTC 4 cut(s) 1097, 1223, 2367, 2685
TscAI CASTG 9 cut(s) 504, 891, 1021, 1695, 1869, 1935, 2198, 2255, 2578
TseFI GTSAC 5 cut(s) 132, 969, 1073, 1250, 1899
Tsp45I GTSAC 5 cut(s) 132, 969, 1073, 1250, 1899
TspRI CASTG 9 cut(s) 504, 891, 1021, 1695, 1869, 1935, 2198, 2255, 2578
Van91I CCANNNNNTGG 2 cut(s) 1481, 2035
Vha464I CTTAAG 2 cut(s) 166, 2797
VspI ATTAAT 2 cut(s) 402, 2580
XapI RAATTY 7 cut(s) 32, 450, 510, 617, 838, 995, 2531
XbaI TCTAGA 2 cut(s) 1087, 2314
XceI RCATGY 4 cut(s) 460, 856, 1450, 2257
XcmI CCANNNNNNNNNTGG 1 cut(s) 94
XmiI GTMKAC 1 cut(s) 2187
XmnI GAANNNNTTC 2 cut(s) 483, 1128
XspI CTAG 9 cut(s) 119, 912, 945, 1088, 1719, 1818, 1970, 2315, 2672
ZrmI AGTACT 2 cut(s) 1382, 2803
Zsp2I ATGCAT 2 cut(s) 1291, 2400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.