Rorug02G0159900

Auxin-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000361
Physical Location & Seq
Forward (+)
14253010 .. 14254373
1364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0159900.1

Sequence Viewer

Length: 1356 bp
ATGGCTTCCTCCTCGAGCTCACCAATGTCGGTGAACGGAGATGGAAACTATTCTGTCATTACAGTTGCATCGCTGGAGGAAACAGTCAACGGAACAGAATGGCTCCTGGACCCCTCAGCTGGAAATGAGTCTTTTTGCATCTTCCGAGTACCCAAATGCCTAGTTGACGTAAACAAGAACACCTACGGGCCTCATATAGTCTCCATCGGTCCTTATCACCATGGTGAAAAACATTTGGAGATGATGCAGCAGCACAAGAGGAGATTTCTTCGCGATCTTCTTGCTCAAACACCACCAACTGGCCTGGGACTAGACGACTACCGGCAGGCTGTAGCATTAAGGGAAGAAGAGATAAGAGGGTGCTATTCAGAGTCAACGCTCAAGTTTTGCAGGGATCAGCTCGTTGACATGATGGTGTTGGATGGTCTCTTCATTATTGAACTCTTGTGCAAAATTAGAGGATTATCAAAAACGCCAATTGGAGATGACCCCATCTTTCACTTTGCATCGGTCTTTACTTATCTCATCCGAGATCTTCTTCGGTTGGAGAACCAGATTCCTTTCTTTGTTCTTCAAACATTATTCAACGCATCAAGAGATTCAAGACATGCCAGTGACTCATCCCTTGCCGAACTAGGTCTACAATTATTCGAATCCGCAGTAGAAATACCTTATGGAGATCATGATCAAGGAAAACATTTACTTGATTTACTTCGTTTGAGTTTTATCCACCCAAGCATGAGGCTCAAAGAAATCAACCTTGGATTTTCCTCTTCATCTGTTCAGATTATCCAACCAGCAAAAAAGCTTCATCTAGCTGGAATAAAGTTCAAGGCAAGGCATGCGCAGAATGAGGCAATGAGCTTCCTAGATATCCGATTCTCAAATGGAGTGCTTGAAATCCCACTTATAACACTGGATGATCTTTGTACTGATCTATTACTGAACTTCGTTGCATTTGAACAATGCTACTCTCATTCTCCAAGGCACATAACCACTTACGCTGCATTCATGAGTTGCCTAGTTCGTTCGCCTACGGACGCAGCATTTCTCTGCGAACATGATATTATTGAAAAATATATTGCCACCGATGAGGAAGTTGCAAATTTTTTCAGAAACATGGGGAAGGATGTGCCTTTCGATATTGGCCAGAGTTATCTACTGGAGTTGTTCAAGGATGTAAATGAGTACCAGAGGAATATGTGGCATGTCCGATGGGCGGGTTTCAGGTTGAAGTATTTTGATACACCATGGTCTTTCTTGTCTGCTTTAGCTGCTATCATACTCTTACTCTTCACTGCAATTCAGACCTTCTTTTCTGTTTATGCATATGTGCTTCCACCAAAAGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0048046 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cupin_1

Protein Analysis

451

Amino Acids

51.32

Weight (kDa)

5.59

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 47 - 432 1.1e-112 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000361)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20630
fragaria_vesca FvH4_1g08531 FvH4_1g08540 FvH4_1g08541 FvH4_1g18170 FvH4_1g18630 FvH4_2g06460 FvH4_6g36650
malus_domestica MD02G1089800.v1.1 MD15G1216400.v1.1 MD15G1216500.v1.1
prunus_persica Prupe.7G200100_v2.0.a1 Prupe.7G200200_v2.0.a1 Prupe.7G200300_v2.0.a1
pyrus_communis pycom02g07170 pycom15g19190
rosa_chinensis RchiOBHm_Chr2g0094741 RchiOBHm_Chr2g0094751 RchiOBHm_Chr2g0094761 RchiOBHm_Chr2g0094781 RchiOBHm_Chr2g0094791 RchiOBHm_Chr2g0095301 RchiOBHm_Chr2g0108661 RchiOBHm_Chr2g0109441 RchiOBHm_Chr2g0149111
rosa_laevigata RLG00000002180 RLG00000003674 RLG00000016514 RLG00000016515 RLG00000016516 RLG00000016517 RLG00000016521 RLG00000017684 RLG00000017738 RLG00000020370
rosa_multiflora Rmu_co8274667.1_g000001 Rmu_co8326765.1_g000001 Rmu_co8421367.1_g000001 Rmu_sc0000332.1_g000020 Rmu_sc0001588.1_g000008 Rmu_sc0002105.1_g000003 Rmu_sc0002345.1_g000005 Rmu_sc0004359.1_g000003 Rmu_sc0004359.1_g000007 Rmu_sc0004359.1_g000008 Rmu_sc0004359.1_g000010 Rmu_sc0004359.1_g000012 Rmu_sc0004359.1_g000015 Rmu_sc0006422.1_g000015 Rmu_sc0006422.1_g000017 Rmu_sc0006422.1_g000019 Rmu_sc0006422.1_g000021 Rmu_sc0006422.1_g000022 Rmu_sc0012763.1_g000007 Rmu_sc0022670.1_g000002 Rmu_sc0025419.1_g000001
rosa_roxburghii Rroxscaffold_2G00098450 Rroxscaffold_2G00134240 Rroxscaffold_2G00146910 Rroxscaffold_2G00146920 Rroxscaffold_2G00146930 Rroxscaffold_2G00146940 Rroxscaffold_3G00238780
rosa_rugosa Rorug02G0046400.1 Rorug02G0046500.1 Rorug02G0046600.1 Rorug02G0046700.1 Rorug02G0046900 Rorug02G0049100 Rorug02G0155100 Rorug02G0159900 Rorug02G0160200 Rorug02G0409200 Rorug07G0200300
rosa_samantha Rh2AG093700 Rh2AG093800 Rh2AG093900 Rh2AG094000 Rh2AG094100 Rh2AG094400 Rh2AG097200 Rh2AG204600 Rh2AG212100 Rh2AG469000 Rh2BG094200 Rh2BG094400 Rh2BG094700 Rh2BG095000 Rh2BG222500 Rh2BG481500 Rh2DG093300 Rh2DG093400 Rh2DG093500 Rh2DG093700 Rh2DG093800 Rh2DG098300 Rh2DG217700 Rh2DG490400 Rh7AG339600 Rh7CG357600 Rh7DG338300
rosa_wichuraiana Rw2G007340 Rw2G016310 Rw2G038180 Rw7G028890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 911
Acc16I TGCGCA 1 cut(s) 846
AccB7I CCANNNNNTGG 1 cut(s) 299
AccI GTMKAC 1 cut(s) 640
AccII CGCG 1 cut(s) 273
AciI CCGC 2 cut(s) 657, 1220
AclWI GGATC 1 cut(s) 402
AcoI YGGCCR 1 cut(s) 1147
AcsI RAATTY 1 cut(s) 1105
AfaI GTAC 3 cut(s) 150, 931, 1190
AfiI CCNNNNNNNGG 3 cut(s) 119, 299, 1219
AjnI CCWGG 2 cut(s) 105, 303
AjuI GAANNNNNNNTTGG 2 cut(s) 744, 776
AleI CACNNNNGTG 1 cut(s) 222
AluBI AGCT 7 cut(s) 18, 119, 400, 808, 818, 864, 1274
AluI AGCT 7 cut(s) 18, 119, 400, 808, 818, 864, 1274
Alw21I GWGCWC 1 cut(s) 20
Alw26I GTCTC 2 cut(s) 205, 431
AlwI GGATC 1 cut(s) 402
Ama87I CYCGRG 1 cut(s) 13
AoxI GGCC 3 cut(s) 188, 301, 1147
ApeKI GCWGC 5 cut(s) 247, 250, 1004, 1043, 1274
ApoI RAATTY 1 cut(s) 1105
Asp700I GAANNNNTTC 1 cut(s) 49
AspLEI GCGC 1 cut(s) 847
AspS9I GGNCC 3 cut(s) 109, 188, 209
AsuHPI GGTGA 4 cut(s) 12, 43, 209, 236
AsuII TTCGAA 1 cut(s) 651
AvaI CYCGRG 1 cut(s) 13
AvaII GGWCC 2 cut(s) 109, 209
BalI TGGCCA 1 cut(s) 1149
BanII GRGCYC 1 cut(s) 20
Bbv12I GWGCWC 1 cut(s) 20
BbvCI CCTCAGC 1 cut(s) 115
BbvI GCAGC 5 cut(s) 259, 262, 991, 1055, 1261
BccI CCATC 6 cut(s) 35, 212, 406, 416, 500, 1209
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BciT130I CCWGG 2 cut(s) 107, 305
BclI TGATCA 1 cut(s) 685
BcoDI GTCTC 2 cut(s) 205, 431
BfaI CTAG 6 cut(s) 161, 311, 635, 815, 869, 1022
BfmI CTRYAG 1 cut(s) 330
BglII AGATCT 1 cut(s) 532
BisI GCNGC 5 cut(s) 248, 251, 1005, 1044, 1275
BlsI GCNGC 5 cut(s) 249, 252, 1006, 1045, 1276
Bme1390I CCNGG 2 cut(s) 107, 305
Bme18I GGWCC 2 cut(s) 109, 209
BmeT110I CYCGRG 1 cut(s) 13
BmgT120I GGNCC 3 cut(s) 109, 188, 209
BmiI GGNNCC 2 cut(s) 104, 111
BmrFI CCNGG 2 cut(s) 107, 305
BmsI GCATC 5 cut(s) 77, 147, 234, 515, 599
BpmI CTGGAG 2 cut(s) 95, 1184
Bpu10I CCTNAGC 1 cut(s) 115
Bpu14I TTCGAA 1 cut(s) 651
BpuEI CTTGAG 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 684
BsaI GGTCTC 1 cut(s) 431
BsaJI CCNNGG 5 cut(s) 220, 304, 760, 983, 1250
Bsc4I CCNNNNNNNGG 3 cut(s) 119, 299, 1219
Bse118I RCCGGY 1 cut(s) 321
Bse1I ACTGG 4 cut(s) 304, 612, 921, 1167
Bse3DI GCAATG 1 cut(s) 864
Bse8I GATNNNNATC 1 cut(s) 684
BseBI CCWGG 2 cut(s) 107, 305
BseDI CCNNGG 5 cut(s) 220, 304, 760, 983, 1250
BseGI GGATG 6 cut(s) 427, 525, 620, 925, 1135, 1183
BseJI GATNNNNATC 1 cut(s) 684
BseLI CCNNNNNNNGG 3 cut(s) 119, 299, 1219
BseMI GCAATG 1 cut(s) 864
BseMII CTCAG 1 cut(s) 129
BseNI ACTGG 4 cut(s) 304, 612, 921, 1167
BseRI GAGGAG 1 cut(s) 274
BseXI GCAGC 5 cut(s) 259, 262, 991, 1055, 1261
Bsh1236I CGCG 1 cut(s) 273
BshFI GGCC 3 cut(s) 190, 303, 1149
BsiHKAI GWGCWC 1 cut(s) 20
BsiHKCI CYCGRG 1 cut(s) 13
BsiSI CCGG 1 cut(s) 322
BslFI GGGAC 1 cut(s) 321
BslI CCNNNNNNNGG 3 cut(s) 119, 299, 1219
BsmAI GTCTC 2 cut(s) 205, 431
BsmFI GGGAC 1 cut(s) 321
BsmI GAATGC 1 cut(s) 1007
BsnI GGCC 3 cut(s) 190, 303, 1149
Bso31I GGTCTC 1 cut(s) 431
BsoBI CYCGRG 1 cut(s) 13
Bsp119I TTCGAA 1 cut(s) 651
Bsp1286I GDGCHC 1 cut(s) 20
Bsp143I GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
Bsp19I CCATGG 2 cut(s) 220, 1250
Bsp68I TCGCGA 1 cut(s) 273
BspACI CCGC 2 cut(s) 657, 1220
BspANI GGCC 3 cut(s) 190, 303, 1149
BspCNI CTCAG 1 cut(s) 128
BspFNI CGCG 1 cut(s) 273
BspHI TCATGA 2 cut(s) 682, 1011
BspLI GGNNCC 2 cut(s) 104, 111
BspPI GGATC 1 cut(s) 402
BspT104I TTCGAA 1 cut(s) 651
BspTNI GGTCTC 1 cut(s) 431
BsrDI GCAATG 1 cut(s) 864
BsrFI RCCGGY 1 cut(s) 321
BsrI ACTGG 4 cut(s) 304, 612, 921, 1167
BssAI RCCGGY 1 cut(s) 321
BssECI CCNNGG 5 cut(s) 220, 304, 760, 983, 1250
BssMI GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
BssT1I CCWWGG 4 cut(s) 220, 760, 983, 1250
Bst2UI CCWGG 2 cut(s) 107, 305
Bst4CI ACNGT 2 cut(s) 64, 85
Bst6I CTCTTC 4 cut(s) 342, 434, 778, 1298
BstAPI GCANNNNNTGC 1 cut(s) 842
BstBI TTCGAA 1 cut(s) 651
BstC8I GCNNGC 2 cut(s) 327, 843
BstDEI CTNAG 1 cut(s) 115
BstDSI CCRYGG 2 cut(s) 220, 1250
BstF5I GGATG 6 cut(s) 427, 525, 620, 925, 1135, 1183
BstFNI CGCG 1 cut(s) 273
BstHHI GCGC 1 cut(s) 847
BstKTI GATC 7 cut(s) 277, 397, 535, 682, 688, 925, 937
BstMAI GTCTC 2 cut(s) 205, 431
BstMBI GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
BstMWI GCNNNNNNNGC 2 cut(s) 842, 1274
BstNI CCWGG 2 cut(s) 107, 305
BstNSI RCATGY 3 cut(s) 611, 845, 1211
BstSCI CCNGG 2 cut(s) 105, 303
BstSFI CTRYAG 1 cut(s) 330
BstUI CGCG 1 cut(s) 273
BstV1I GCAGC 5 cut(s) 259, 262, 991, 1055, 1261
BstX2I RGATCY 1 cut(s) 532
BstYI RGATCY 1 cut(s) 532
BsuRI GGCC 3 cut(s) 190, 303, 1149
BtgI CCRYGG 2 cut(s) 220, 1250
BtgZI GCGATG 1 cut(s) 54
BtsCI GGATG 6 cut(s) 427, 525, 620, 925, 1135, 1183
BtsI GCAGTG 1 cut(s) 1296
BtsIMutI CAGTG 3 cut(s) 619, 914, 1296
BtuMI TCGCGA 1 cut(s) 273
Cac8I GCNNGC 2 cut(s) 327, 843
CciI TCATGA 2 cut(s) 682, 1011
CfoI GCGC 1 cut(s) 847
Cfr10I RCCGGY 1 cut(s) 321
Cfr13I GGNCC 3 cut(s) 109, 188, 209
CseI GACGC 1 cut(s) 1049
Csp6I GTAC 3 cut(s) 149, 930, 1189
CviQI GTAC 3 cut(s) 149, 930, 1189
DdeI CTNAG 1 cut(s) 115
DpnI GATC 7 cut(s) 276, 396, 534, 681, 687, 924, 936
DpnII GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
EaeI YGGCCR 1 cut(s) 1147
Eam1104I CTCTTC 4 cut(s) 342, 434, 778, 1298
EarI CTCTTC 4 cut(s) 342, 434, 778, 1298
Ecl136II GAGCTC 1 cut(s) 18
Eco130I CCWWGG 4 cut(s) 220, 760, 983, 1250
Eco24I GRGCYC 1 cut(s) 20
Eco31I GGTCTC 1 cut(s) 431
Eco32I GATATC 1 cut(s) 874
Eco47I GGWCC 2 cut(s) 109, 209
Eco53kI GAGCTC 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 13
EcoICRI GAGCTC 1 cut(s) 18
EcoRII CCWGG 2 cut(s) 105, 303
EcoRV GATATC 1 cut(s) 874
EcoT14I CCWWGG 4 cut(s) 220, 760, 983, 1250
EcoT22I ATGCAT 1 cut(s) 1330
EcoT38I GRGCYC 1 cut(s) 20
ErhI CCWWGG 4 cut(s) 220, 760, 983, 1250
FaqI GGGAC 1 cut(s) 321
FauI CCCGC 1 cut(s) 1213
FauNDI CATATG 1 cut(s) 1330
FbaI TGATCA 1 cut(s) 685
FblI GTMKAC 1 cut(s) 640
Fnu4HI GCNGC 5 cut(s) 248, 251, 1005, 1044, 1275
FokI GGATG 6 cut(s) 434, 512, 607, 932, 1142, 1190
FriOI GRGCYC 1 cut(s) 20
Fsp4HI GCNGC 5 cut(s) 248, 251, 1005, 1044, 1275
FspBI CTAG 6 cut(s) 161, 311, 635, 815, 869, 1022
FspI TGCGCA 1 cut(s) 846
GlaI GCGC 1 cut(s) 846
GluI GCNGC 5 cut(s) 248, 251, 1005, 1044, 1275
GsuI CTGGAG 2 cut(s) 95, 1184
HaeIII GGCC 3 cut(s) 190, 303, 1149
HapII CCGG 1 cut(s) 322
HgaI GACGC 1 cut(s) 1049
HhaI GCGC 1 cut(s) 847
Hin6I GCGC 1 cut(s) 845
HinP1I GCGC 1 cut(s) 845
HincII GTYRAC 4 cut(s) 88, 166, 375, 406
HindII GTYRAC 4 cut(s) 88, 166, 375, 406
HindIII AAGCTT 1 cut(s) 806
HinfI GANTC 7 cut(s) 128, 371, 556, 599, 617, 653, 879
HpaII CCGG 1 cut(s) 322
HphI GGTGA 4 cut(s) 12, 43, 209, 236
Hpy166II GTNNAC 7 cut(s) 34, 88, 166, 172, 375, 406, 641
Hpy188I TCNGA 8 cut(s) 146, 370, 530, 786, 878, 1115, 1214, 1308
Hpy188III TCNNGA 5 cut(s) 272, 594, 603, 683, 1012
Hpy8I GTNNAC 7 cut(s) 34, 88, 166, 172, 375, 406, 641
HpyAV CCTTC 2 cut(s) 1120, 1321
HpyCH4III ACNGT 2 cut(s) 64, 85
HpyCH4IV ACGT 1 cut(s) 168
HpyF10VI GCNNNNNNNGC 2 cut(s) 842, 1274
HpyF3I CTNAG 1 cut(s) 115
HpySE526I ACGT 1 cut(s) 168
HspAI GCGC 1 cut(s) 845
Ksp22I TGATCA 1 cut(s) 685
Kzo9I GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
LmnI GCTCC 1 cut(s) 108
Lsp1109I GCAGC 5 cut(s) 259, 262, 991, 1055, 1261
LweI GCATC 5 cut(s) 77, 147, 234, 515, 599
MaeI CTAG 6 cut(s) 161, 311, 635, 815, 869, 1022
MaeII ACGT 1 cut(s) 168
MaeIII GTNAC 1 cut(s) 614
MalI GATC 7 cut(s) 276, 396, 534, 681, 687, 924, 936
MboI GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
MfeI CAATTG 1 cut(s) 477
MflI RGATCY 1 cut(s) 532
MhlI GDGCHC 1 cut(s) 20
MlsI TGGCCA 1 cut(s) 1149
MluCI AATT 5 cut(s) 453, 477, 644, 1105, 1302
MluNI TGGCCA 1 cut(s) 1149
MlyI GAGTC 3 cut(s) 137, 380, 611
MmeI TCCRAC 3 cut(s) 399, 525, 817
Mox20I TGGCCA 1 cut(s) 1149
Mph1103I ATGCAT 1 cut(s) 1330
MroXI GAANNNNTTC 1 cut(s) 49
MscI TGGCCA 1 cut(s) 1149
MseI TTAA 1 cut(s) 338
MslI CAYNNNNRTG 3 cut(s) 222, 413, 612
Msp20I TGGCCA 1 cut(s) 1149
MspA1I CMGCKG 1 cut(s) 119
MspI CCGG 1 cut(s) 322
MspR9I CCNGG 2 cut(s) 107, 305
MunI CAATTG 1 cut(s) 477
Mva1269I GAATGC 1 cut(s) 1007
MvaI CCWGG 2 cut(s) 107, 305
MvnI CGCG 1 cut(s) 273
MwoI GCNNNNNNNGC 2 cut(s) 842, 1274
NcoI CCATGG 2 cut(s) 220, 1250
NdeI CATATG 1 cut(s) 1330
NdeII GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
NlaIV GGNNCC 2 cut(s) 104, 111
NmuCI GTSAC 1 cut(s) 614
NruI TCGCGA 1 cut(s) 273
NsbI TGCGCA 1 cut(s) 846
NsiI ATGCAT 1 cut(s) 1330
NspI RCATGY 3 cut(s) 611, 845, 1211
NspV TTCGAA 1 cut(s) 651
OliI CACNNNNGTG 1 cut(s) 222
PaeI GCATGC 1 cut(s) 845
PaeR7I CTCGAG 1 cut(s) 13
PagI TCATGA 2 cut(s) 682, 1011
PctI GAATGC 1 cut(s) 1007
PdmI GAANNNNTTC 1 cut(s) 49
PfeI GAWTC 4 cut(s) 556, 599, 653, 879
PflMI CCANNNNNTGG 1 cut(s) 299
PfoI TCCNGGA 1 cut(s) 105
PkrI GCNGC 5 cut(s) 249, 252, 1006, 1045, 1276
PleI GAGTC 3 cut(s) 136, 379, 611
PpsI GAGTC 3 cut(s) 136, 379, 611
PsiI TTATAA 1 cut(s) 911
Psp124BI GAGCTC 1 cut(s) 20
Psp6I CCWGG 2 cut(s) 105, 303
PspGI CCWGG 2 cut(s) 105, 303
PspN4I GGNNCC 2 cut(s) 104, 111
PspPI GGNCC 3 cut(s) 109, 188, 209
PspXI VCTCGAGB 1 cut(s) 13
PsrI GAACNNNNNNTAC 2 cut(s) 624, 656
PsuI RGATCY 1 cut(s) 532
PvuII CAGCTG 1 cut(s) 119
RruI TCGCGA 1 cut(s) 273
RsaI GTAC 3 cut(s) 150, 931, 1190
RsaNI GTAC 3 cut(s) 149, 930, 1189
RseI CAYNNNNRTG 3 cut(s) 222, 413, 612
SacI GAGCTC 1 cut(s) 20
SaqAI TTAA 1 cut(s) 338
SatI GCNGC 5 cut(s) 248, 251, 1005, 1044, 1275
Sau3AI GATC 7 cut(s) 274, 394, 532, 679, 685, 922, 934
Sau96I GGNCC 3 cut(s) 109, 188, 209
SchI GAGTC 3 cut(s) 137, 380, 611
ScrFI CCNGG 2 cut(s) 107, 305
SduI GDGCHC 1 cut(s) 20
SfaNI GCATC 5 cut(s) 77, 147, 234, 515, 599
SfcI CTRYAG 1 cut(s) 330
Sfr274I CTCGAG 1 cut(s) 13
SfuI TTCGAA 1 cut(s) 651
SinI GGWCC 2 cut(s) 109, 209
SlaI CTCGAG 1 cut(s) 13
SmiMI CAYNNNNRTG 3 cut(s) 222, 413, 612
SmlI CTYRAG 2 cut(s) 13, 380
SmoI CTYRAG 2 cut(s) 13, 380
SphI GCATGC 1 cut(s) 845
Sse9I AATT 5 cut(s) 453, 477, 644, 1105, 1302
SsiI CCGC 2 cut(s) 657, 1220
SspMI CTAG 6 cut(s) 161, 311, 635, 815, 869, 1022
SstI GAGCTC 1 cut(s) 20
StyD4I CCNGG 2 cut(s) 105, 303
StyI CCWWGG 4 cut(s) 220, 760, 983, 1250
TaaI ACNGT 2 cut(s) 64, 85
TaiI ACGT 1 cut(s) 171
TaqI TCGA 3 cut(s) 14, 651, 1140
TaqII GACCGA 2 cut(s) 197, 499
TasI AATT 5 cut(s) 453, 477, 644, 1105, 1302
TatI WGTACW 1 cut(s) 929
TfiI GAWTC 4 cut(s) 556, 599, 653, 879
Tru1I TTAA 1 cut(s) 338
Tru9I TTAA 1 cut(s) 338
TscAI CASTG 3 cut(s) 619, 921, 1303
TseFI GTSAC 1 cut(s) 614
TseI GCWGC 5 cut(s) 247, 250, 1004, 1043, 1274
Tsp45I GTSAC 1 cut(s) 614
TspDTI ATGAA 4 cut(s) 421, 765, 800, 1000
TspGWI ACGGA 3 cut(s) 51, 105, 1052
TspRI CASTG 3 cut(s) 619, 921, 1303
Van91I CCANNNNNTGG 1 cut(s) 299
VpaK11BI GGWCC 2 cut(s) 109, 209
XapI RAATTY 1 cut(s) 1105
XceI RCATGY 3 cut(s) 611, 845, 1211
XhoI CTCGAG 1 cut(s) 13
XmiI GTMKAC 1 cut(s) 640
XmnI GAANNNNTTC 1 cut(s) 49
XspI CTAG 6 cut(s) 161, 311, 635, 815, 869, 1022
Zsp2I ATGCAT 1 cut(s) 1330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.