Rorug02G0160200

Auxin-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000361
Physical Location & Seq
Forward (+)
14271595 .. 14273811
2217 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0160200.1

Sequence Viewer

Length: 2067 bp
ATGTCGTTCCAGTTTCGGAAACCAGTTCCTGCGTCCACAAGCACTTCTTCTGATTCTGGTTCTGATAAAATTCATTATAAATTGTTGAGGCATTCCGGACCTGATTATGATGAACTAATCATTCGTCTTTCACTGTACGCTTTCAACCGACTGTCCCCTAGTGATCAAAAAAAGCAACTGGAAGAAATCCGCAGGCGCCACCATGAAGAAAGTGATTTTACAGAATTATTCAAGAAATTAAAGTACGGTGATCAGCTGGAGCTCCTATCTGAAGTTTTGCAGAAACTCAAGTGTGAAAGGCTAATGCCTTCATTCAAGCAACTAGACGCGGAGCATCAGCAACAAGTGATTCAACAACTGGCTCATGTTACCCCATTCTCATCCTCCTTGTGGAGTGACCCCGAGGCCGAGAATCTTCTCAGGGGCCCCGAGGAAACTGAAGAGGATTTCAGACTCAGAAGATTTACACAGCTGTGTACAGATCGTGCCCGGGATGCTCACAAGCTTATTGTTTCCTGGAAAAGTGAAGATGATGAACAGGAGAAGACATCTGATGATGATAACGAAAACAATTCGGATTGGAAGTCGTGTTTTTCTGAATTTTTCTTAGGTTTCTCAATTATTTGGTTCCAAGGACAATGGGCCAGTGGTCAAGACATGCTGATTGAACAACTCTCCAAGGAATTTACAGGTGTTGTGATCGAGAAAAGTCTGCAGAACGAATCTGAGGAGGATTTCAAACTCAGAACATTCAAAGAGTTATGCACCAAAGTAATTGACTTTCGGGTCCAAGAGGAATTCATTGAAAATGCTGAACAGAAACTAGAAAGATGGCTTTTGCATTGCTGGGATTCCTGGCCGATGATCCTTGAGCCACAGGAGTTTGACCGTGCTGCTGAATTACTCTCTGATCTCTCGACTCTTGGGTTTGGCCTACTGTCAGCCAAGTATCAACAACACAAGATTCATGAGATGTCTATTCAAGTTGAATCAGTTGTTAAAACAAAACGACGCCTTGCAGCAGAGGATCTACAGACTAGTACTACTGATCCTGAGGAAGAGGAAGCTGTTAGAATGAGAAGATTCACAGAGCTATTTAATCAAGTTCCGGTCCCTACCCGGATTGATTTATTCAAGGAGTTGAGGAAAGTATTGTCAAAGCAAAAAAGCTATTCTGGGGCTGTTCATTTCTTCTGCGGACTAGGCTCCGAGGATCAAGCAGAAATGATCGAGAAACTGGAACATAAGATAAGGGACTATGCGAGATCTGAGAAATTCTCCCATGGGGAGGATTTCAGGCTCAGAATATTCAAGAAGGTGATCGAGAAACTGGCACATAAGATAAGGGACTCTGCCGAACTCATTAGACTTGAGAAATTCTCTGGTGAAAGTGAGGAGGATTTGAGGCTCAGAAGATTCAAGAAGGTGTGTATTCAACATCTATCCACCTGGGATTATATTGTTTGGCCTGAAGCTGATAAGAAGCGTGTTCAACAAGGTACATCTGATCATAACGAAGAAGAGTCCCCTTATGCCGAATTCTTGTTCGATGTATCAATTACTTGGTTCAAAGCACGATGCGCTAATTACAGGAGAAACCCCATTCATGTTATACTTTCCGGTCAAGTTGAAGTTATTGAGAAACTGCCACAGGAGGGTGAGGAGGATTTCAGACTCAGGAGATTCACAGAGTCGTTTAAGCGACTTGAGTTCACTTCCAAAGAAAGTGTCGTCGACTACATTCAAGATACATTATTTGATGACCTTCGTTATGAGGCACGTTTGGAGCCTCAGGGCTACGAACCACCGGCTGAAGGAAGGGGTTCGTTTGACCTTGGTTATGACGAACGTTGGGAGCCTCAGGGCTACGAACCACCGACTGAAAGAAACTGTATGTGCGTCGAGCTACCGGCTGAAGGAAGGGGTTCGTTTGATTCTGAATGGATCAAGATGAAACTTCCAAATCTACAAGGTCAGGGAGCAACAGCAACTACTCCTCAAGGAGCACCAGTAGGTGGATCAGCAACTACGACTCAGGCAGGAGGAGGAATAGTCAACCGTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0048046 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cupin_1

Protein Analysis

688

Amino Acids

80.37

Weight (kDa)

5.25

Isoelectric Point (pI)

61.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000361)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20630
fragaria_vesca FvH4_1g08531 FvH4_1g08540 FvH4_1g08541 FvH4_1g18170 FvH4_1g18630 FvH4_2g06460 FvH4_6g36650
malus_domestica MD02G1089800.v1.1 MD15G1216400.v1.1 MD15G1216500.v1.1
prunus_persica Prupe.7G200100_v2.0.a1 Prupe.7G200200_v2.0.a1 Prupe.7G200300_v2.0.a1
pyrus_communis pycom02g07170 pycom15g19190
rosa_chinensis RchiOBHm_Chr2g0094741 RchiOBHm_Chr2g0094751 RchiOBHm_Chr2g0094761 RchiOBHm_Chr2g0094781 RchiOBHm_Chr2g0094791 RchiOBHm_Chr2g0095301 RchiOBHm_Chr2g0108661 RchiOBHm_Chr2g0109441 RchiOBHm_Chr2g0149111
rosa_laevigata RLG00000002180 RLG00000003674 RLG00000016514 RLG00000016515 RLG00000016516 RLG00000016517 RLG00000016521 RLG00000017684 RLG00000017738 RLG00000020370
rosa_multiflora Rmu_co8274667.1_g000001 Rmu_co8326765.1_g000001 Rmu_co8421367.1_g000001 Rmu_sc0000332.1_g000020 Rmu_sc0001588.1_g000008 Rmu_sc0002105.1_g000003 Rmu_sc0002345.1_g000005 Rmu_sc0004359.1_g000003 Rmu_sc0004359.1_g000007 Rmu_sc0004359.1_g000008 Rmu_sc0004359.1_g000010 Rmu_sc0004359.1_g000012 Rmu_sc0004359.1_g000015 Rmu_sc0006422.1_g000015 Rmu_sc0006422.1_g000017 Rmu_sc0006422.1_g000019 Rmu_sc0006422.1_g000021 Rmu_sc0006422.1_g000022 Rmu_sc0012763.1_g000007 Rmu_sc0022670.1_g000002 Rmu_sc0025419.1_g000001
rosa_roxburghii Rroxscaffold_2G00098450 Rroxscaffold_2G00134240 Rroxscaffold_2G00146910 Rroxscaffold_2G00146920 Rroxscaffold_2G00146930 Rroxscaffold_2G00146940 Rroxscaffold_3G00238780
rosa_rugosa Rorug02G0046400.1 Rorug02G0046500.1 Rorug02G0046600.1 Rorug02G0046700.1 Rorug02G0046900 Rorug02G0049100 Rorug02G0155100 Rorug02G0159900 Rorug02G0160200 Rorug02G0409200 Rorug07G0200300
rosa_samantha Rh2AG093700 Rh2AG093800 Rh2AG093900 Rh2AG094000 Rh2AG094100 Rh2AG094400 Rh2AG097200 Rh2AG204600 Rh2AG212100 Rh2AG469000 Rh2BG094200 Rh2BG094400 Rh2BG094700 Rh2BG095000 Rh2BG222500 Rh2BG481500 Rh2DG093300 Rh2DG093400 Rh2DG093500 Rh2DG093700 Rh2DG093800 Rh2DG098300 Rh2DG217700 Rh2DG490400 Rh7AG339600 Rh7CG357600 Rh7DG338300
rosa_wichuraiana Rw2G007340 Rw2G016310 Rw2G038180 Rw7G028890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 78
AasI GACNNNNNNGTC 1 cut(s) 785
AccB1I GGYRCC 1 cut(s) 195
AccB7I CCANNNNNTGG 1 cut(s) 2015
AccI GTMKAC 1 cut(s) 1734
AccII CGCG 1 cut(s) 329
AccIII TCCGGA 1 cut(s) 95
AciI CCGC 3 cut(s) 190, 329, 1197
AclI AACGTT 1 cut(s) 1849
AclWI GGATC 6 cut(s) 859, 1035, 1043, 1221, 1952, 2026
AcoI YGGCCR 1 cut(s) 857
AcsI RAATTY 7 cut(s) 69, 599, 683, 797, 1274, 1376, 1538
AcuI CTGAAG 5 cut(s) 291, 459, 1491, 1833, 1935
AcyI GRCGYC 2 cut(s) 196, 1012
AfaI GTAC 5 cut(s) 137, 245, 478, 1042, 1501
AfiI CCNNNNNNNGG 6 cut(s) 390, 1288, 1655, 1814, 1916, 2015
AhlI ACTAGT 1 cut(s) 1037
AjnI CCWGG 3 cut(s) 515, 854, 1448
AleI CACNNNNGTG 1 cut(s) 472
AluBI AGCT 9 cut(s) 256, 262, 472, 505, 1067, 1093, 1170, 1475, 1906
AluI AGCT 9 cut(s) 256, 262, 472, 505, 1067, 1093, 1170, 1475, 1906
Alw21I GWGCWC 2 cut(s) 264, 2008
AlwI GGATC 6 cut(s) 859, 1035, 1043, 1221, 1952, 2026
AlwNI CAGNNNCTG 1 cut(s) 29
Ama87I CYCGRG 3 cut(s) 401, 428, 489
Aor13HI TCCGGA 1 cut(s) 95
AoxI GGCC 6 cut(s) 405, 424, 642, 857, 931, 1466
ApaI GGGCCC 1 cut(s) 428
ApeKI GCWGC 2 cut(s) 893, 1019
ApoI RAATTY 7 cut(s) 69, 599, 683, 797, 1274, 1376, 1538
ArsI GACNNNNNNTTYG 2 cut(s) 1713, 1745
Asp700I GAANNNNTTC 2 cut(s) 1822, 1924
AspLEI GCGC 2 cut(s) 198, 1583
AspS9I GGNCC 6 cut(s) 98, 424, 425, 642, 787, 1111
AsuC2I CCSGG 3 cut(s) 490, 491, 1120
AsuHPI GGTGA 4 cut(s) 260, 1330, 1397, 1670
AvaI CYCGRG 3 cut(s) 401, 428, 489
AvaII GGWCC 3 cut(s) 98, 787, 1111
AxyI CCTNAGG 3 cut(s) 1053, 1791, 1860
BaeGI GKGCMC 2 cut(s) 428, 490
BanI GGYRCC 1 cut(s) 195
BanII GRGCYC 2 cut(s) 264, 428
BbsI GAAGAC 1 cut(s) 551
Bbv12I GWGCWC 2 cut(s) 264, 2008
BbvI GCAGC 2 cut(s) 880, 1031
BccI CCATC 1 cut(s) 825
BciT130I CCWGG 3 cut(s) 517, 856, 1450
BclI TGATCA 3 cut(s) 163, 250, 1507
BcnI CCSGG 3 cut(s) 490, 491, 1120
BcuI ACTAGT 1 cut(s) 1037
BfaI CTAG 5 cut(s) 159, 323, 824, 1038, 1202
BfmI CTRYAG 2 cut(s) 713, 1031
BfoI RGCGCY 1 cut(s) 199
BglII AGATCT 1 cut(s) 1265
BisI GCNGC 2 cut(s) 894, 1020
BlsI GCNGC 2 cut(s) 895, 1021
BmcAI AGTACT 1 cut(s) 1042
Bme1390I CCNGG 6 cut(s) 490, 491, 517, 856, 1120, 1450
Bme18I GGWCC 3 cut(s) 98, 787, 1111
BmeT110I CYCGRG 3 cut(s) 401, 428, 489
BmgT120I GGNCC 6 cut(s) 98, 424, 425, 642, 787, 1111
BmrFI CCNGG 6 cut(s) 490, 491, 517, 856, 1120, 1450
BmsI GCATC 3 cut(s) 343, 484, 1568
BpiI GAAGAC 1 cut(s) 551
BplI GAGNNNNNCTC 4 cut(s) 1262, 1294, 1364, 1396
BpmI CTGGAG 1 cut(s) 278
BpuEI CTTGAG 5 cut(s) 272, 890, 1391, 1727, 1983
BpuMI CCSGG 3 cut(s) 490, 491, 1120
BsaHI GRCGYC 2 cut(s) 196, 1012
BsaJI CCNNGG 9 cut(s) 402, 429, 489, 631, 678, 1209, 1282, 1449, 1834
BsaWI WCCGGW 3 cut(s) 95, 1108, 1619
BsaXI ACNNNNNCTCC 4 cut(s) 1995, 2025, 2037, 2067
Bsc4I CCNNNNNNNGG 6 cut(s) 390, 1288, 1655, 1814, 1916, 2015
Bse118I RCCGGY 2 cut(s) 1807, 1909
Bse1I ACTGG 8 cut(s) 10, 23, 183, 363, 645, 1242, 1335, 2009
Bse21I CCTNAGG 3 cut(s) 1053, 1791, 1860
Bse3DI GCAATG 1 cut(s) 841
BseAI TCCGGA 1 cut(s) 95
BseBI CCWGG 3 cut(s) 517, 856, 1450
BseDI CCNNGG 9 cut(s) 402, 429, 489, 631, 678, 1209, 1282, 1449, 1834
BseGI GGATG 2 cut(s) 380, 499
BseLI CCNNNNNNNGG 6 cut(s) 390, 1288, 1655, 1814, 1916, 2015
BseMI GCAATG 1 cut(s) 841
BseNI ACTGG 8 cut(s) 10, 23, 183, 363, 645, 1242, 1335, 2009
BseRI GAGGAG 5 cut(s) 743, 1409, 1676, 1986, 2058
BseSI GKGCMC 2 cut(s) 428, 490
BseXI GCAGC 2 cut(s) 880, 1031
BseYI CCCAGC 1 cut(s) 846
Bsh1236I CGCG 1 cut(s) 329
BshFI GGCC 6 cut(s) 407, 426, 644, 859, 933, 1468
BshNI GGYRCC 1 cut(s) 195
BsiHKAI GWGCWC 2 cut(s) 264, 2008
BsiHKCI CYCGRG 3 cut(s) 401, 428, 489
BsiSI CCGG 7 cut(s) 96, 490, 1109, 1120, 1620, 1808, 1910
BslFI GGGAC 5 cut(s) 139, 1097, 1268, 1361, 1510
BslI CCNNNNNNNGG 6 cut(s) 390, 1288, 1655, 1814, 1916, 2015
BsmFI GGGAC 5 cut(s) 139, 1097, 1268, 1361, 1510
BsmI GAATGC 1 cut(s) 91
BsnI GGCC 6 cut(s) 407, 426, 644, 859, 933, 1468
BsoBI CYCGRG 3 cut(s) 401, 428, 489
Bsp120I GGGCCC 1 cut(s) 424
Bsp1286I GDGCHC 4 cut(s) 264, 428, 490, 2008
Bsp13I TCCGGA 1 cut(s) 95
Bsp1407I TGTACA 1 cut(s) 476
Bsp19I CCATGG 1 cut(s) 1282
BspACI CCGC 3 cut(s) 190, 329, 1197
BspANI GGCC 6 cut(s) 407, 426, 644, 859, 933, 1468
BspEI TCCGGA 1 cut(s) 95
BspFNI CGCG 1 cut(s) 329
BspHI TCATGA 1 cut(s) 967
BspMAI CTGCAG 1 cut(s) 717
BspPI GGATC 6 cut(s) 859, 1035, 1043, 1221, 1952, 2026
BspT107I GGYRCC 1 cut(s) 195
BsrDI GCAATG 1 cut(s) 841
BsrFI RCCGGY 2 cut(s) 1807, 1909
BsrGI TGTACA 1 cut(s) 476
BsrI ACTGG 8 cut(s) 10, 23, 183, 363, 645, 1242, 1335, 2009
BssAI RCCGGY 2 cut(s) 1807, 1909
BssECI CCNNGG 9 cut(s) 402, 429, 489, 631, 678, 1209, 1282, 1449, 1834
BssNI GRCGYC 2 cut(s) 196, 1012
BssT1I CCWWGG 4 cut(s) 631, 678, 1282, 1834
Bst2UI CCWGG 3 cut(s) 517, 856, 1450
Bst4CI ACNGT 7 cut(s) 135, 153, 248, 890, 939, 1892, 2060
Bst6I CTCTTC 3 cut(s) 435, 1053, 1515
BstACI GRCGYC 2 cut(s) 196, 1012
BstAUI TGTACA 1 cut(s) 476
BstC8I GCNNGC 1 cut(s) 194
BstDSI CCRYGG 1 cut(s) 1282
BstF5I GGATG 2 cut(s) 380, 499
BstFNI CGCG 1 cut(s) 329
BstH2I RGCGCY 1 cut(s) 199
BstHHI GCGC 2 cut(s) 198, 1583
BstMWI GCNNNNNNNGC 3 cut(s) 494, 1203, 1580
BstNI CCWGG 3 cut(s) 517, 856, 1450
BstNSI RCATGY 1 cut(s) 661
BstSCI CCNGG 6 cut(s) 488, 489, 515, 854, 1118, 1448
BstSFI CTRYAG 2 cut(s) 713, 1031
BstSLI GKGCMC 2 cut(s) 428, 490
BstUI CGCG 1 cut(s) 329
BstV1I GCAGC 2 cut(s) 880, 1031
BstV2I GAAGAC 1 cut(s) 551
BstX2I RGATCY 2 cut(s) 1027, 1265
BstYI RGATCY 2 cut(s) 1027, 1265
Bsu36I CCTNAGG 3 cut(s) 1053, 1791, 1860
BsuRI GGCC 6 cut(s) 407, 426, 644, 859, 933, 1468
BtgI CCRYGG 1 cut(s) 1282
BtsCI GGATG 2 cut(s) 380, 499
BtsIMutI CAGTG 2 cut(s) 131, 652
Cac8I GCNNGC 1 cut(s) 194
CaiI CAGNNNCTG 1 cut(s) 29
CciI TCATGA 1 cut(s) 967
CfoI GCGC 2 cut(s) 198, 1583
Cfr10I RCCGGY 2 cut(s) 1807, 1909
Cfr13I GGNCC 6 cut(s) 98, 424, 425, 642, 787, 1111
Cfr9I CCCGGG 1 cut(s) 489
CseI GACGC 4 cut(s) 21, 335, 1020, 1888
Csp6I GTAC 5 cut(s) 136, 244, 477, 1041, 1500
CviAII CATG 6 cut(s) 203, 365, 658, 968, 1283, 1607
CviQI GTAC 5 cut(s) 136, 244, 477, 1041, 1500
DinI GGCGCC 1 cut(s) 197
DrdI GACNNNNNNGTC 1 cut(s) 785
DseDI GACNNNNNNGTC 1 cut(s) 785
EaeI YGGCCR 1 cut(s) 857
Eam1104I CTCTTC 3 cut(s) 435, 1053, 1515
EarI CTCTTC 3 cut(s) 435, 1053, 1515
Ecl136II GAGCTC 1 cut(s) 262
Eco130I CCWWGG 4 cut(s) 631, 678, 1282, 1834
Eco24I GRGCYC 2 cut(s) 264, 428
Eco47I GGWCC 3 cut(s) 98, 787, 1111
Eco53kI GAGCTC 1 cut(s) 262
Eco57I CTGAAG 5 cut(s) 291, 459, 1491, 1833, 1935
Eco81I CCTNAGG 3 cut(s) 1053, 1791, 1860
Eco88I CYCGRG 3 cut(s) 401, 428, 489
EcoICRI GAGCTC 1 cut(s) 262
EcoO109I RGGNCCY 2 cut(s) 424, 425
EcoRI GAATTC 2 cut(s) 797, 1538
EcoRII CCWGG 3 cut(s) 515, 854, 1448
EcoT14I CCWWGG 4 cut(s) 631, 678, 1282, 1834
EcoT38I GRGCYC 2 cut(s) 264, 428
EgeI GGCGCC 1 cut(s) 197
EheI GGCGCC 1 cut(s) 197
ErhI CCWWGG 4 cut(s) 631, 678, 1282, 1834
FaeI CATG 6 cut(s) 206, 368, 661, 971, 1286, 1610
FalI AAGNNNNNCTT 2 cut(s) 31, 63
FaqI GGGAC 5 cut(s) 139, 1097, 1268, 1361, 1510
FatI CATG 6 cut(s) 202, 364, 657, 967, 1282, 1606
FbaI TGATCA 3 cut(s) 163, 250, 1507
FblI GTMKAC 1 cut(s) 1734
Fnu4HI GCNGC 2 cut(s) 894, 1020
FokI GGATG 2 cut(s) 367, 506
FriOI GRGCYC 2 cut(s) 264, 428
Fsp4HI GCNGC 2 cut(s) 894, 1020
FspBI CTAG 5 cut(s) 159, 323, 824, 1038, 1202
GlaI GCGC 2 cut(s) 197, 1582
GluI GCNGC 2 cut(s) 894, 1020
GsaI CCCAGC 1 cut(s) 850
GsuI CTGGAG 1 cut(s) 278
HaeII RGCGCY 1 cut(s) 199
HaeIII GGCC 6 cut(s) 407, 426, 644, 859, 933, 1468
HapII CCGG 7 cut(s) 96, 490, 1109, 1120, 1620, 1808, 1910
HgaI GACGC 4 cut(s) 21, 335, 1020, 1888
HhaI GCGC 2 cut(s) 198, 1583
Hin1I GRCGYC 2 cut(s) 196, 1012
Hin1II CATG 6 cut(s) 206, 368, 661, 971, 1286, 1610
Hin6I GCGC 2 cut(s) 196, 1581
HinP1I GCGC 2 cut(s) 196, 1581
HincII GTYRAC 2 cut(s) 1735, 2056
HindII GTYRAC 2 cut(s) 1735, 2056
HindIII AAGCTT 1 cut(s) 503
HpaII CCGG 7 cut(s) 96, 490, 1109, 1120, 1620, 1808, 1910
HphI GGTGA 4 cut(s) 260, 1330, 1397, 1670
Hpy166II GTNNAC 5 cut(s) 36, 477, 1713, 1735, 2056
Hpy8I GTNNAC 5 cut(s) 36, 477, 1713, 1735, 2056
Hpy99I CGWCG 3 cut(s) 1014, 1736, 1904
HpyAV CCTTC 8 cut(s) 318, 1309, 1417, 1775, 1808, 1812, 1910, 1914
HpyCH4III ACNGT 7 cut(s) 135, 153, 248, 890, 939, 1892, 2060
HpyCH4IV ACGT 2 cut(s) 1780, 1849
HpyCH4V TGCA 5 cut(s) 280, 715, 765, 841, 1019
HpyF10VI GCNNNNNNNGC 3 cut(s) 494, 1203, 1580
HpySE526I ACGT 2 cut(s) 1780, 1849
Hsp92I GRCGYC 2 cut(s) 196, 1012
Hsp92II CATG 6 cut(s) 206, 368, 661, 971, 1286, 1610
HspAI GCGC 2 cut(s) 196, 1581
KasI GGCGCC 1 cut(s) 195
Kpn2I TCCGGA 1 cut(s) 95
Ksp22I TGATCA 3 cut(s) 163, 250, 1507
LmnI GCTCC 8 cut(s) 259, 267, 331, 1211, 1786, 1855, 1979, 2003
Lsp1109I GCAGC 2 cut(s) 880, 1031
LweI GCATC 3 cut(s) 343, 484, 1568
MaeI CTAG 5 cut(s) 159, 323, 824, 1038, 1202
MaeII ACGT 2 cut(s) 1780, 1849
MaeIII GTNAC 2 cut(s) 367, 395
MflI RGATCY 2 cut(s) 1027, 1265
MhlI GDGCHC 4 cut(s) 264, 428, 490, 2008
Mly113I GGCGCC 1 cut(s) 196
MlyI GAGTC 7 cut(s) 447, 913, 1343, 1532, 1668, 1700, 2026
MroI TCCGGA 1 cut(s) 95
MroXI GAANNNNTTC 2 cut(s) 1822, 1924
MseI TTAA 4 cut(s) 239, 999, 1098, 1698
MslI CAYNNNNRTG 1 cut(s) 472
MspA1I CMGCKG 2 cut(s) 256, 472
MspI CCGG 7 cut(s) 96, 490, 1109, 1120, 1620, 1808, 1910
MspR9I CCNGG 6 cut(s) 490, 491, 517, 856, 1120, 1450
Mva1269I GAATGC 1 cut(s) 91
MvaI CCWGG 3 cut(s) 517, 856, 1450
MvnI CGCG 1 cut(s) 329
MwoI GCNNNNNNNGC 3 cut(s) 494, 1203, 1580
NarI GGCGCC 1 cut(s) 196
NciI CCSGG 3 cut(s) 490, 491, 1120
NcoI CCATGG 1 cut(s) 1282
NlaIII CATG 6 cut(s) 206, 368, 661, 971, 1286, 1610
NmeAIII GCCGAG 1 cut(s) 433
NmuCI GTSAC 1 cut(s) 395
NspI RCATGY 1 cut(s) 661
OliI CACNNNNGTG 1 cut(s) 472
PagI TCATGA 1 cut(s) 967
PctI GAATGC 1 cut(s) 91
PdmI GAANNNNTTC 2 cut(s) 1822, 1924
PflMI CCANNNNNTGG 1 cut(s) 2015
PfoI TCCNGGA 1 cut(s) 515
PkrI GCNGC 2 cut(s) 895, 1021
PleI GAGTC 7 cut(s) 447, 913, 1343, 1531, 1668, 1699, 2026
PluTI GGCGCC 1 cut(s) 199
PpsI GAGTC 7 cut(s) 447, 913, 1343, 1531, 1668, 1699, 2026
PsiI TTATAA 1 cut(s) 78
Psp124BI GAGCTC 1 cut(s) 264
Psp1406I AACGTT 1 cut(s) 1849
Psp6I CCWGG 3 cut(s) 515, 854, 1448
PspFI CCCAGC 1 cut(s) 846
PspGI CCWGG 3 cut(s) 515, 854, 1448
PspOMI GGGCCC 1 cut(s) 424
PspPI GGNCC 6 cut(s) 98, 424, 425, 642, 787, 1111
PstI CTGCAG 1 cut(s) 717
PstNI CAGNNNCTG 1 cut(s) 29
PsuI RGATCY 2 cut(s) 1027, 1265
PvuII CAGCTG 2 cut(s) 256, 472
RsaI GTAC 5 cut(s) 137, 245, 478, 1042, 1501
RsaNI GTAC 5 cut(s) 136, 244, 477, 1041, 1500
RseI CAYNNNNRTG 1 cut(s) 472
SacI GAGCTC 1 cut(s) 264
SalI GTCGAC 1 cut(s) 1733
SaqAI TTAA 4 cut(s) 239, 999, 1098, 1698
SatI GCNGC 2 cut(s) 894, 1020
Sau96I GGNCC 6 cut(s) 98, 424, 425, 642, 787, 1111
ScaI AGTACT 1 cut(s) 1042
SchI GAGTC 7 cut(s) 447, 913, 1343, 1532, 1668, 1700, 2026
ScrFI CCNGG 6 cut(s) 490, 491, 517, 856, 1120, 1450
SduI GDGCHC 4 cut(s) 264, 428, 490, 2008
SfaNI GCATC 3 cut(s) 343, 484, 1568
SfcI CTRYAG 2 cut(s) 713, 1031
SfoI GGCGCC 1 cut(s) 197
SinI GGWCC 3 cut(s) 98, 787, 1111
SmaI CCCGGG 1 cut(s) 491
SmiMI CAYNNNNRTG 1 cut(s) 472
SmlI CTYRAG 5 cut(s) 287, 869, 1370, 1706, 1998
SmoI CTYRAG 5 cut(s) 287, 869, 1370, 1706, 1998
SpeI ACTAGT 1 cut(s) 1037
SsiI CCGC 3 cut(s) 190, 329, 1197
SspDI GGCGCC 1 cut(s) 195
SspI AATATT 1 cut(s) 1308
SspMI CTAG 5 cut(s) 159, 323, 824, 1038, 1202
SstI GAGCTC 1 cut(s) 264
StyD4I CCNGG 6 cut(s) 488, 489, 515, 854, 1118, 1448
StyI CCWWGG 4 cut(s) 631, 678, 1282, 1834
TaaI ACNGT 7 cut(s) 135, 153, 248, 890, 939, 1892, 2060
TaiI ACGT 2 cut(s) 1783, 1852
TaqI TCGA 7 cut(s) 702, 917, 1230, 1323, 1548, 1734, 1902
TatI WGTACW 2 cut(s) 476, 1040
Tru1I TTAA 4 cut(s) 239, 999, 1098, 1698
Tru9I TTAA 4 cut(s) 239, 999, 1098, 1698
TscAI CASTG 2 cut(s) 138, 652
TseFI GTSAC 1 cut(s) 395
TseI GCWGC 2 cut(s) 893, 1019
Tsp45I GTSAC 1 cut(s) 395
TspMI CCCGGG 1 cut(s) 489
TspRI CASTG 2 cut(s) 138, 652
Van91I CCANNNNNTGG 1 cut(s) 2015
VpaK11BI GGWCC 3 cut(s) 98, 787, 1111
XapI RAATTY 7 cut(s) 69, 599, 683, 797, 1274, 1376, 1538
XceI RCATGY 1 cut(s) 661
XmaI CCCGGG 1 cut(s) 489
XmiI GTMKAC 1 cut(s) 1734
XmnI GAANNNNTTC 2 cut(s) 1822, 1924
XspI CTAG 5 cut(s) 159, 323, 824, 1038, 1202
ZrmI AGTACT 1 cut(s) 1042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.