Rh1DG289200

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000942
Physical Location & Seq
Reverse (-)
51231766 .. 51234082
2317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG289200.1

Sequence Viewer

Length: 972 bp
ATGGGTCAGGGAACTCCGGGCGGTTTGAACCGGCAAGGCCTACCGGGCGACCGAAAGCCCAACGGCAACGACAAGAAGGAGAAGAAGTTCGAGCCGGCGGCTCCGCCGGCCCGAGTGGGCCGCAAGCAGCGGAAACAGAAGGGTCCAGAAGCGGCGGTGAGGCTTCCGACGGTGACGCCGCTGACCAAGTGCAAGCTCCAGCTACTGAAGCTGGAGCGGATTAAGGATTACCTGCTTATGGAGGAGGAGTTTGTGACAAACCAGGAGCGGCTGAAGCCTCAGGAGGAGAAGGCCGAGGAGGACAGATCTAAGGTCGACGATCTACGTGCCTCGCCCATGAGCGTCGGCAATCTCAAGGAGTTGATCGATGAGAACCACGCGATTGTTTCGTCATCGGTGGGGCCCGAGTACTATGTGGGGGTCCTCTCCTTTGTCGATAAGGACCAGTTGGAGCCTGGGTGCACCATTTTGATGCACAATAAGCTTAATCTTGGTGCCACCATTGAGGCAAACACGGTGTATGGTGCGTTGCTGGGGTTAGAGACTTTCAGCCAATTGTGTACTTTTGACCATGAAACTAAATCCATGCAAGTACATAAGTCACCATGGAACATACGAGACAAACCAAGGTTTCCATATCGAGGGCTTTTGCTTGGATGTCTTGGTTCAGGTGCAACTATAGTTCATGGAGTTCAAAACTTGTGGGTTTCACAACCCCCTCCAAATATTCAATATGCAGCTATAGTGATTGGTGGTTCGTTTATTATTGAAGGAGCTTCTCTTCTTGTTGCCATACAAGCTGTCAAGAAAGGTGCTGCTGCTGAGGGCATGAAATTAAGAGACTATATATGGCATGGTCATGATCCTACCTCTGTTGCAGTCATGACTGAGGATGGCGCTGCTGTAGCTGGTCTTGCTATTGCTGCAGCATCATTGGTTGCTGTAAATGTCACAGGAATCGACATGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000502 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005838 GO:0005886 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0007276 GO:0007292 GO:0008134 GO:0008150 GO:0008152 GO:0008540 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010074 GO:0010078 GO:0010101 GO:0010102 GO:0010243 GO:0010311 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019827 GO:0019941 GO:0019953 GO:0022414 GO:0022607 GO:0022622 GO:0022624 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033554 GO:0034622 GO:0034976 GO:0035266 GO:0035966 GO:0036402 GO:0036503 GO:0040007 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043248 GO:0043254 GO:0043632 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0045087 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0046686 GO:0048232 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048532 GO:0048589 GO:0048609 GO:0048646 GO:0048731 GO:0048827 GO:0048829 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051704 GO:0051716 GO:0051788 GO:0060255 GO:0060260 GO:0060261 GO:0060968 GO:0061136 GO:0065003 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090351 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:1905392 GO:1905393 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03050 ko05165 ko05169 ko05203 map03050 map05165 map05169 map05203
Pfam Domains
Protein Families
AAA

Protein Analysis

323

Amino Acids

35.04

Weight (kDa)

7.68

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 115 - 162 1.1e-10 Proteasomal ATPase OB C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 240
AccB1I GGYRCC 1 cut(s) 494
AccBSI CCGCTC 2 cut(s) 217, 268
AccI GTMKAC 1 cut(s) 315
AccII CGCG 1 cut(s) 380
AclWI GGATC 1 cut(s) 857
AcuI CTGAAG 2 cut(s) 227, 293
AcyI GRCGYC 1 cut(s) 176
AfaI GTAC 3 cut(s) 410, 562, 594
AfiI CCNNNNNNNGG 2 cut(s) 238, 641
AgsI TTSAA 4 cut(s) 28, 695, 731, 770
AjnI CCWGG 2 cut(s) 261, 454
AloI GAACNNNNNNTCC 2 cut(s) 71, 103
AluBI AGCT 8 cut(s) 196, 202, 211, 484, 740, 776, 800, 908
AluI AGCT 8 cut(s) 196, 202, 211, 484, 740, 776, 800, 908
Alw21I GWGCWC 1 cut(s) 464
Alw26I GTCTC 3 cut(s) 536, 612, 834
Alw44I GTGCAC 1 cut(s) 460
AlwI GGATC 1 cut(s) 857
AlwNI CAGNNNCTG 1 cut(s) 205
Ama87I CYCGRG 2 cut(s) 111, 404
AoxI GGCC 5 cut(s) 37, 108, 118, 291, 401
ApaI GGGCCC 1 cut(s) 405
ApaLI GTGCAC 1 cut(s) 460
ApeKI GCWGC 7 cut(s) 127, 737, 815, 818, 899, 923, 926
Asp700I GAANNNNTTC 1 cut(s) 86
AspLEI GCGC 1 cut(s) 899
AspS9I GGNCC 7 cut(s) 109, 118, 143, 401, 402, 421, 442
AsuC2I CCSGG 2 cut(s) 18, 45
AsuHPI GGTGA 3 cut(s) 169, 184, 594
AvaI CYCGRG 2 cut(s) 111, 404
AvaII GGWCC 3 cut(s) 143, 421, 442
AxyI CCTNAGG 1 cut(s) 279
BaeGI GKGCMC 2 cut(s) 405, 464
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 1 cut(s) 405
Bbv12I GWGCWC 1 cut(s) 464
BbvCI CCTCAGC 1 cut(s) 822
BbvI GCAGC 7 cut(s) 139, 749, 802, 805, 886, 910, 938
BccI CCATC 1 cut(s) 887
BceAI ACGGC 1 cut(s) 79
BcgI CGANNNNNNTGC 2 cut(s) 308, 342
BciT130I CCWGG 2 cut(s) 263, 456
BcnI CCSGG 2 cut(s) 18, 45
BcoDI GTCTC 3 cut(s) 536, 612, 834
BfmI CTRYAG 4 cut(s) 678, 741, 903, 924
BfoI RGCGCY 1 cut(s) 900
BfuAI ACCTGC 1 cut(s) 240
BglI GCCNNNNNGGC 1 cut(s) 45
BglII AGATCT 1 cut(s) 305
BmcAI AGTACT 1 cut(s) 410
Bme1390I CCNGG 4 cut(s) 18, 45, 263, 456
Bme18I GGWCC 3 cut(s) 143, 421, 442
BmeT110I CYCGRG 2 cut(s) 111, 404
BmgT120I GGNCC 7 cut(s) 109, 118, 143, 401, 402, 421, 442
BmiI GGNNCC 7 cut(s) 102, 144, 402, 403, 422, 453, 496
BmrFI CCNGG 4 cut(s) 18, 45, 263, 456
BmsI GCATC 2 cut(s) 462, 938
BpmI CTGGAG 2 cut(s) 182, 233
Bpu10I CCTNAGC 1 cut(s) 822
BpuEI CTTGAG 1 cut(s) 338
BpuMI CCSGG 2 cut(s) 18, 45
Bsa29I ATCGAT 1 cut(s) 366
BsaAI YACGTR 1 cut(s) 326
BsaHI GRCGYC 1 cut(s) 176
BsaJI CCNNGG 4 cut(s) 294, 455, 605, 626
BsaXI ACNNNNNCTCC 6 cut(s) 71, 101, 233, 263, 443, 473
Bsc4I CCNNNNNNNGG 2 cut(s) 238, 641
Bse118I RCCGGY 3 cut(s) 30, 94, 106
Bse1I ACTGG 1 cut(s) 445
Bse21I CCTNAGG 1 cut(s) 279
BseBI CCWGG 2 cut(s) 263, 456
BseCI ATCGAT 1 cut(s) 366
BseDI CCNNGG 4 cut(s) 294, 455, 605, 626
BseGI GGATG 2 cut(s) 662, 898
BseLI CCNNNNNNNGG 2 cut(s) 238, 641
BseMII CTCAG 3 cut(s) 293, 813, 879
BseNI ACTGG 1 cut(s) 445
BseRI GAGGAG 4 cut(s) 257, 260, 299, 311
BseSI GKGCMC 2 cut(s) 405, 464
BseXI GCAGC 7 cut(s) 139, 749, 802, 805, 886, 910, 938
BseYI CCCAGC 1 cut(s) 532
Bsh1236I CGCG 1 cut(s) 380
Bsh1285I CGRYCG 1 cut(s) 52
BshFI GGCC 5 cut(s) 39, 110, 120, 293, 403
BshNI GGYRCC 1 cut(s) 494
BshVI ATCGAT 1 cut(s) 366
BsiEI CGRYCG 1 cut(s) 52
BsiHKAI GWGCWC 1 cut(s) 464
BsiHKCI CYCGRG 2 cut(s) 111, 404
BsiSI CCGG 5 cut(s) 17, 31, 44, 95, 107
BslI CCNNNNNNNGG 2 cut(s) 238, 641
BsmAI GTCTC 3 cut(s) 536, 612, 834
BsnI GGCC 5 cut(s) 39, 110, 120, 293, 403
BsoBI CYCGRG 2 cut(s) 111, 404
Bsp120I GGGCCC 1 cut(s) 401
Bsp1286I GDGCHC 2 cut(s) 405, 464
Bsp143I GATC 4 cut(s) 305, 319, 363, 862
Bsp19I CCATGG 1 cut(s) 605
BspANI GGCC 5 cut(s) 39, 110, 120, 293, 403
BspCNI CTCAG 3 cut(s) 292, 814, 880
BspDI ATCGAT 1 cut(s) 366
BspFNI CGCG 1 cut(s) 380
BspHI TCATGA 2 cut(s) 859, 882
BspLI GGNNCC 7 cut(s) 102, 144, 402, 403, 422, 453, 496
BspMAI CTGCAG 1 cut(s) 928
BspMI ACCTGC 1 cut(s) 240
BspPI GGATC 1 cut(s) 857
BspT107I GGYRCC 1 cut(s) 494
BsrBI CCGCTC 2 cut(s) 217, 268
BsrFI RCCGGY 3 cut(s) 30, 94, 106
BsrI ACTGG 1 cut(s) 445
BssAI RCCGGY 3 cut(s) 30, 94, 106
BssECI CCNNGG 4 cut(s) 294, 455, 605, 626
BssMI GATC 4 cut(s) 305, 319, 363, 862
BssNI GRCGYC 1 cut(s) 176
BssT1I CCWWGG 2 cut(s) 605, 626
Bst2UI CCWGG 2 cut(s) 263, 456
Bst4CI ACNGT 2 cut(s) 172, 517
Bst6I CTCTTC 1 cut(s) 786
BstACI GRCGYC 1 cut(s) 176
BstBAI YACGTR 1 cut(s) 326
BstC8I GCNNGC 4 cut(s) 96, 108, 125, 194
BstDEI CTNAG 4 cut(s) 279, 309, 822, 888
BstDSI CCRYGG 1 cut(s) 605
BstF5I GGATG 2 cut(s) 662, 898
BstFNI CGCG 1 cut(s) 380
BstH2I RGCGCY 1 cut(s) 900
BstHHI GCGC 1 cut(s) 899
BstKTI GATC 4 cut(s) 308, 322, 366, 865
BstMAI GTCTC 3 cut(s) 536, 612, 834
BstMBI GATC 4 cut(s) 305, 319, 363, 862
BstMCI CGRYCG 1 cut(s) 52
BstMWI GCNNNNNNNGC 9 cut(s) 45, 107, 208, 274, 481, 797, 905, 914, 923
BstNI CCWGG 2 cut(s) 263, 456
BstNSI RCATGY 1 cut(s) 967
BstSCI CCNGG 4 cut(s) 16, 43, 261, 454
BstSFI CTRYAG 4 cut(s) 678, 741, 903, 924
BstSLI GKGCMC 2 cut(s) 405, 464
BstUI CGCG 1 cut(s) 380
BstV1I GCAGC 7 cut(s) 139, 749, 802, 805, 886, 910, 938
BstX2I RGATCY 1 cut(s) 305
BstYI RGATCY 1 cut(s) 305
Bsu15I ATCGAT 1 cut(s) 366
Bsu36I CCTNAGG 1 cut(s) 279
BsuRI GGCC 5 cut(s) 39, 110, 120, 293, 403
BsuTUI ATCGAT 1 cut(s) 366
BtgI CCRYGG 1 cut(s) 605
BtsCI GGATG 2 cut(s) 662, 898
BveI ACCTGC 1 cut(s) 240
Cac8I GCNNGC 4 cut(s) 96, 108, 125, 194
CaiI CAGNNNCTG 1 cut(s) 205
CciI TCATGA 2 cut(s) 859, 882
CfoI GCGC 1 cut(s) 899
Cfr10I RCCGGY 3 cut(s) 30, 94, 106
Cfr13I GGNCC 7 cut(s) 109, 118, 143, 401, 402, 421, 442
ClaI ATCGAT 1 cut(s) 366
CseI GACGC 2 cut(s) 184, 331
Csp6I GTAC 3 cut(s) 409, 561, 593
CspCI CAANNNNNGTGG 2 cut(s) 683, 718
CviQI GTAC 3 cut(s) 409, 561, 593
DdeI CTNAG 4 cut(s) 279, 309, 822, 888
DpnI GATC 4 cut(s) 307, 321, 365, 864
DpnII GATC 4 cut(s) 305, 319, 363, 862
Eam1104I CTCTTC 1 cut(s) 786
EarI CTCTTC 1 cut(s) 786
EciI GGCGGA 1 cut(s) 93
Eco130I CCWWGG 2 cut(s) 605, 626
Eco147I AGGCCT 1 cut(s) 39
Eco24I GRGCYC 1 cut(s) 405
Eco47I GGWCC 3 cut(s) 143, 421, 442
Eco57I CTGAAG 2 cut(s) 227, 293
Eco81I CCTNAGG 1 cut(s) 279
Eco88I CYCGRG 2 cut(s) 111, 404
EcoO109I RGGNCCY 2 cut(s) 401, 421
EcoRII CCWGG 2 cut(s) 261, 454
EcoT14I CCWWGG 2 cut(s) 605, 626
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 2 cut(s) 605, 626
FblI GTMKAC 1 cut(s) 315
FokI GGATG 2 cut(s) 669, 905
FriOI GRGCYC 1 cut(s) 405
GlaI GCGC 1 cut(s) 898
GsaI CCCAGC 1 cut(s) 536
GsuI CTGGAG 2 cut(s) 182, 233
HaeII RGCGCY 1 cut(s) 900
HaeIII GGCC 5 cut(s) 39, 110, 120, 293, 403
HapII CCGG 5 cut(s) 17, 31, 44, 95, 107
HgaI GACGC 2 cut(s) 184, 331
HhaI GCGC 1 cut(s) 899
Hin1I GRCGYC 1 cut(s) 176
Hin6I GCGC 1 cut(s) 897
HinP1I GCGC 1 cut(s) 897
HincII GTYRAC 1 cut(s) 316
HindII GTYRAC 1 cut(s) 316
HindIII AAGCTT 1 cut(s) 482
HinfI GANTC 1 cut(s) 957
HpaII CCGG 5 cut(s) 17, 31, 44, 95, 107
HphI GGTGA 3 cut(s) 169, 184, 594
Hpy166II GTNNAC 3 cut(s) 316, 462, 561
Hpy188I TCNGA 1 cut(s) 168
Hpy188III TCNNGA 5 cut(s) 146, 281, 805, 860, 883
Hpy8I GTNNAC 3 cut(s) 316, 462, 561
Hpy99I CGWCG 3 cut(s) 172, 320, 347
HpyAV CCTTC 4 cut(s) 70, 133, 283, 764
HpyCH4III ACNGT 2 cut(s) 172, 517
HpyCH4IV ACGT 1 cut(s) 325
HpyCH4V TGCA 8 cut(s) 192, 462, 475, 589, 674, 737, 878, 926
HpyF10VI GCNNNNNNNGC 9 cut(s) 45, 107, 208, 274, 481, 797, 905, 914, 923
HpyF3I CTNAG 4 cut(s) 279, 309, 822, 888
HpySE526I ACGT 1 cut(s) 325
Hsp92I GRCGYC 1 cut(s) 176
HspAI GCGC 1 cut(s) 897
KroI GCCGGC 2 cut(s) 94, 106
KroNI GCCGGC 2 cut(s) 96, 108
Kzo9I GATC 4 cut(s) 305, 319, 363, 862
LmnI GCTCC 6 cut(s) 106, 201, 214, 265, 451, 773
Lsp1109I GCAGC 7 cut(s) 139, 749, 802, 805, 886, 910, 938
LweI GCATC 2 cut(s) 462, 938
MaeII ACGT 1 cut(s) 325
MaeIII GTNAC 4 cut(s) 172, 253, 600, 949
MalI GATC 4 cut(s) 307, 321, 365, 864
MbiI CCGCTC 2 cut(s) 217, 268
MboI GATC 4 cut(s) 305, 319, 363, 862
MboII GAAGA 2 cut(s) 94, 773
MfeI CAATTG 1 cut(s) 554
MflI RGATCY 1 cut(s) 305
MhlI GDGCHC 2 cut(s) 405, 464
MluCI AATT 2 cut(s) 554, 833
MmeI TCCRAC 2 cut(s) 191, 429
MroNI GCCGGC 2 cut(s) 94, 106
MroXI GAANNNNTTC 1 cut(s) 86
MseI TTAA 4 cut(s) 222, 486, 836, 970
MslI CAYNNNNRTG 2 cut(s) 470, 858
MspA1I CMGCKG 2 cut(s) 130, 181
MspI CCGG 5 cut(s) 17, 31, 44, 95, 107
MspR9I CCNGG 4 cut(s) 18, 45, 263, 456
MunI CAATTG 1 cut(s) 554
MvaI CCWGG 2 cut(s) 263, 456
MvnI CGCG 1 cut(s) 380
MwoI GCNNNNNNNGC 9 cut(s) 45, 107, 208, 274, 481, 797, 905, 914, 923
NaeI GCCGGC 2 cut(s) 96, 108
NciI CCSGG 2 cut(s) 18, 45
NcoI CCATGG 1 cut(s) 605
NdeII GATC 4 cut(s) 305, 319, 363, 862
NgoMIV GCCGGC 2 cut(s) 94, 106
NlaIV GGNNCC 7 cut(s) 102, 144, 402, 403, 422, 453, 496
NmeAIII GCCGAG 1 cut(s) 319
NmuCI GTSAC 4 cut(s) 172, 253, 600, 949
NspI RCATGY 1 cut(s) 967
PagI TCATGA 2 cut(s) 859, 882
PceI AGGCCT 1 cut(s) 39
PdiI GCCGGC 2 cut(s) 96, 108
PdmI GAANNNNTTC 1 cut(s) 86
PfeI GAWTC 1 cut(s) 957
Ppu21I YACGTR 1 cut(s) 326
PpuMI RGGWCCY 1 cut(s) 421
Psp5II RGGWCCY 1 cut(s) 421
Psp6I CCWGG 2 cut(s) 261, 454
PspFI CCCAGC 1 cut(s) 532
PspGI CCWGG 2 cut(s) 261, 454
PspN4I GGNNCC 7 cut(s) 102, 144, 402, 403, 422, 453, 496
PspOMI GGGCCC 1 cut(s) 401
PspPI GGNCC 7 cut(s) 109, 118, 143, 401, 402, 421, 442
PspPPI RGGWCCY 1 cut(s) 421
PstI CTGCAG 1 cut(s) 928
PstNI CAGNNNCTG 1 cut(s) 205
PsuI RGATCY 1 cut(s) 305
RsaI GTAC 3 cut(s) 410, 562, 594
RsaNI GTAC 3 cut(s) 409, 561, 593
RseI CAYNNNNRTG 2 cut(s) 470, 858
SalI GTCGAC 1 cut(s) 314
SaqAI TTAA 4 cut(s) 222, 486, 836, 970
Sau3AI GATC 4 cut(s) 305, 319, 363, 862
Sau96I GGNCC 7 cut(s) 109, 118, 143, 401, 402, 421, 442
ScaI AGTACT 1 cut(s) 410
ScrFI CCNGG 4 cut(s) 18, 45, 263, 456
SduI GDGCHC 2 cut(s) 405, 464
SfaNI GCATC 2 cut(s) 462, 938
SfcI CTRYAG 4 cut(s) 678, 741, 903, 924
SinI GGWCC 3 cut(s) 143, 421, 442
SmiMI CAYNNNNRTG 2 cut(s) 470, 858
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
Sse9I AATT 2 cut(s) 554, 833
SseBI AGGCCT 1 cut(s) 39
SspI AATATT 1 cut(s) 727
StuI AGGCCT 1 cut(s) 39
StyD4I CCNGG 4 cut(s) 16, 43, 261, 454
StyI CCWWGG 2 cut(s) 605, 626
TaaI ACNGT 2 cut(s) 172, 517
TaiI ACGT 1 cut(s) 328
TaqI TCGA 6 cut(s) 90, 315, 366, 435, 640, 960
TaqII GACCGA 1 cut(s) 66
TasI AATT 2 cut(s) 554, 833
TatI WGTACW 3 cut(s) 408, 560, 592
TauI GCSGC 5 cut(s) 101, 123, 155, 181, 271
TfiI GAWTC 1 cut(s) 957
Tru1I TTAA 4 cut(s) 222, 486, 836, 970
Tru9I TTAA 4 cut(s) 222, 486, 836, 970
TseFI GTSAC 4 cut(s) 172, 253, 600, 949
TseI GCWGC 7 cut(s) 127, 737, 815, 818, 899, 923, 926
Tsp45I GTSAC 4 cut(s) 172, 253, 600, 949
TspDTI ATGAA 3 cut(s) 588, 674, 845
VneI GTGCAC 1 cut(s) 460
VpaK11BI GGWCC 3 cut(s) 143, 421, 442
XceI RCATGY 1 cut(s) 967
XcmI CCANNNNNNNNNTGG 1 cut(s) 452
XmiI GTMKAC 1 cut(s) 315
XmnI GAANNNNTTC 1 cut(s) 86
ZrmI AGTACT 1 cut(s) 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.