Rh2AG360400

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000942
Physical Location & Seq
Reverse (-)
53386758 .. 53389270
2513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG360400.1

Sequence Viewer

Length: 1221 bp
ATGGGTCAGGGAACACCGGGCGGTTTGAACCGGCAAGGCCTACCGGGCGACCGAAAGCCCAACGGCAAAGACAAGAAGGAGAATAAGTTCGAGCCGGCGGCTCCGCCGGCCCGAGTGGGCCGCAAGCAGCGGAAACAGAAGGGTCCAGAAGCGGCGGCGAGGCTTCCGACGGTGACGCCGCTGACCAAGTGCAAGCTCCGGCTACTGAAGCTGGAGTGGATTAAGGATTACCTGCTTATGGAGGAGGAGTTTGTGAAGAACCAGGAGCGGCTGAAGCCTCAGGAGGAGAAGGCCGAGGAGGACAGATCTAAGGTCGACGATCTACGTGCCTCGCCCATGAGCGTCGGCAATCTTGAGGAGCTGATCGATGAGAACCACGCGATTGTTTCGTCGTCGGTGGGGCTCGAGTACTATTTGGGGGTCCTCTCCTTTGTCGATAAGGACCAGTTGGAGCCTGGGTGCGCCATTTTGATGCACAATAAGTCGGTGAGCGAAGATAAAGATGGGAAAGCTATTGTTGGGGAGGCCACCATTGAGGCAAACACGGTGTATGGTGCGTTGCAGGGGTTAGAGACTTTCAGCCAATTGTGTACTTTTGACTATGAAACTAAATCCATGCAAGTACATAAGTCACCATGGAACATACGAGACAAACCAAGGTTTGCATATCAAGGGCTTTTGCTTGGTGCAACTATAGTTCATGGAGTTCAAAACTTGTGGGTTTCACAACCCCCTTCAAATATTCAATATGCAGCTATAGTGATGGGTGGTTCGTTTATTATTGAAGGCGCTTCTCTTCTTGTTGCCATACAAGCTGTCAAGAAAGGTGCTGCTGCTGAGGGCATGAAATTAAGAGACTATATATGGCGTGGTCATGATCCTACCTCTGTTGCAGTCATGACTGAGGATGGCGCTGCTGTAGCTGGTCTTGCTATTGCTGCAGCATCATTGGTTGCTGTAAATGTCACAGGAAATGGAATTTACGATCCTATAGGTTCAATTGTAGTTGGCAACCTTCTTGGAATGGTGGCTATCTTTCTTATACAAAGGAATCGACATGCTTTAATTGGTAGGGCAATGGATGACTATGATGTAGAGAAGGTTCTTCAGTTCTTGAAAAATGACCTGGTTGTCGATTCTTTCCTTTTATTTATTTTGCACGTGGTGCATTCTTGGTTTTCCTTTTGCTGTTGGCATATTAATTTACATTTTGTTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000502 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005838 GO:0005886 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0007276 GO:0007292 GO:0008134 GO:0008150 GO:0008152 GO:0008540 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010074 GO:0010078 GO:0010101 GO:0010102 GO:0010243 GO:0010311 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019827 GO:0019941 GO:0019953 GO:0022414 GO:0022607 GO:0022622 GO:0022624 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033554 GO:0034622 GO:0034976 GO:0035266 GO:0035966 GO:0036402 GO:0036503 GO:0040007 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043248 GO:0043254 GO:0043632 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0045087 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0046686 GO:0048232 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048532 GO:0048589 GO:0048609 GO:0048646 GO:0048731 GO:0048827 GO:0048829 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051704 GO:0051716 GO:0051788 GO:0060255 GO:0060260 GO:0060261 GO:0060968 GO:0061136 GO:0065003 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090351 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:1905392 GO:1905393 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03050 ko05165 ko05169 ko05203 map03050 map05165 map05169 map05203
Pfam Domains
Protein Families
AAA

Protein Analysis

406

Amino Acids

44.71

Weight (kDa)

6.39

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 115 - 162 2e-08 Proteasomal ATPase OB C-terminal domain
Cation_efflux PF01545 231 - 355 1.1e-07 Cation efflux transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1130
Acc36I ACCTGC 1 cut(s) 240
AccBSI CCGCTC 1 cut(s) 268
AccI GTMKAC 1 cut(s) 315
AccII CGCG 1 cut(s) 380
AciI CCGC 9 cut(s) 21, 98, 104, 121, 130, 152, 155, 179, 268
AclWI GGATC 2 cut(s) 872, 980
AcsI RAATTY 1 cut(s) 978
AcuI CTGAAG 3 cut(s) 227, 293, 1091
AcvI CACGTG 1 cut(s) 1162
AcyI GRCGYC 1 cut(s) 176
AdeI CACNNNGTG 1 cut(s) 1165
AfaI GTAC 3 cut(s) 410, 592, 624
AfiI CCNNNNNNNGG 1 cut(s) 238
AgsI TTSAA 7 cut(s) 28, 710, 738, 746, 785, 999, 1117
AjnI CCWGG 3 cut(s) 261, 454, 1125
AloI GAACNNNNNNTCC 2 cut(s) 71, 103
AluBI AGCT 7 cut(s) 196, 211, 361, 512, 755, 815, 923
AluI AGCT 7 cut(s) 196, 211, 361, 512, 755, 815, 923
Alw26I GTCTC 3 cut(s) 566, 642, 849
AlwI GGATC 2 cut(s) 872, 980
Ama87I CYCGRG 2 cut(s) 111, 404
AoxI GGCC 5 cut(s) 37, 108, 118, 291, 525
ApeKI GCWGC 7 cut(s) 127, 752, 830, 833, 914, 938, 941
ApoI RAATTY 1 cut(s) 978
AseI ATTAAT 1 cut(s) 1200
Asp700I GAANNNNTTC 1 cut(s) 86
AspLEI GCGC 3 cut(s) 464, 791, 914
AspS9I GGNCC 5 cut(s) 109, 118, 143, 421, 442
AsuC2I CCSGG 2 cut(s) 18, 45
AsuHPI GGTGA 3 cut(s) 184, 499, 624
AvaI CYCGRG 2 cut(s) 111, 404
AvaII GGWCC 3 cut(s) 143, 421, 442
AxyI CCTNAGG 1 cut(s) 279
BanII GRGCYC 1 cut(s) 405
BbrPI CACGTG 1 cut(s) 1162
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 7 cut(s) 139, 764, 817, 820, 901, 925, 953
BccI CCATC 3 cut(s) 497, 757, 902
BceAI ACGGC 1 cut(s) 79
BcgI CGANNNNNNTGC 2 cut(s) 308, 342
BciT130I CCWGG 3 cut(s) 263, 456, 1127
BcnI CCSGG 2 cut(s) 18, 45
BcoDI GTCTC 3 cut(s) 566, 642, 849
BfmI CTRYAG 5 cut(s) 693, 756, 918, 939, 990
BfoI RGCGCY 2 cut(s) 792, 915
BfuAI ACCTGC 1 cut(s) 240
BglI GCCNNNNNGGC 1 cut(s) 45
BglII AGATCT 1 cut(s) 305
BmcAI AGTACT 1 cut(s) 410
Bme1390I CCNGG 5 cut(s) 18, 45, 263, 456, 1127
Bme18I GGWCC 3 cut(s) 143, 421, 442
BmeT110I CYCGRG 2 cut(s) 111, 404
BmgT120I GGNCC 5 cut(s) 109, 118, 143, 421, 442
BmiI GGNNCC 4 cut(s) 102, 144, 422, 453
BmrFI CCNGG 5 cut(s) 18, 45, 263, 456, 1127
BmsI GCATC 2 cut(s) 462, 953
BpmI CTGGAG 1 cut(s) 233
Bpu10I CCTNAGC 1 cut(s) 837
BpuEI CTTGAG 1 cut(s) 374
BpuMI CCSGG 2 cut(s) 18, 45
Bsa29I ATCGAT 1 cut(s) 366
BsaAI YACGTR 2 cut(s) 326, 1162
BsaHI GRCGYC 1 cut(s) 176
BsaJI CCNNGG 4 cut(s) 294, 455, 635, 656
BsaXI ACNNNNNCTCC 6 cut(s) 71, 101, 233, 263, 443, 473
Bsc4I CCNNNNNNNGG 1 cut(s) 238
Bse118I RCCGGY 3 cut(s) 30, 94, 106
Bse1I ACTGG 1 cut(s) 445
Bse21I CCTNAGG 1 cut(s) 279
Bse3DI GCAATG 1 cut(s) 1083
BseBI CCWGG 3 cut(s) 263, 456, 1127
BseCI ATCGAT 1 cut(s) 366
BseDI CCNNGG 4 cut(s) 294, 455, 635, 656
BseGI GGATG 2 cut(s) 913, 1087
BseLI CCNNNNNNNGG 1 cut(s) 238
BseMI GCAATG 1 cut(s) 1083
BseMII CTCAG 3 cut(s) 293, 828, 894
BseNI ACTGG 1 cut(s) 445
BseRI GAGGAG 5 cut(s) 257, 260, 299, 311, 371
BseXI GCAGC 7 cut(s) 139, 764, 817, 820, 901, 925, 953
Bsh1236I CGCG 1 cut(s) 380
Bsh1285I CGRYCG 1 cut(s) 52
BshFI GGCC 5 cut(s) 39, 110, 120, 293, 527
BshVI ATCGAT 1 cut(s) 366
BsiEI CGRYCG 1 cut(s) 52
BsiHKCI CYCGRG 2 cut(s) 111, 404
BsiSI CCGG 6 cut(s) 17, 31, 44, 95, 107, 199
BslI CCNNNNNNNGG 1 cut(s) 238
BsmAI GTCTC 3 cut(s) 566, 642, 849
BsmI GAATGC 1 cut(s) 1168
BsnI GGCC 5 cut(s) 39, 110, 120, 293, 527
BsoBI CYCGRG 2 cut(s) 111, 404
Bsp1286I GDGCHC 1 cut(s) 405
Bsp143I GATC 5 cut(s) 305, 319, 363, 877, 985
Bsp19I CCATGG 1 cut(s) 635
BspACI CCGC 9 cut(s) 21, 98, 104, 121, 130, 152, 155, 179, 268
BspANI GGCC 5 cut(s) 39, 110, 120, 293, 527
BspCNI CTCAG 3 cut(s) 292, 829, 895
BspDI ATCGAT 1 cut(s) 366
BspFNI CGCG 1 cut(s) 380
BspHI TCATGA 2 cut(s) 874, 897
BspLI GGNNCC 4 cut(s) 102, 144, 422, 453
BspMAI CTGCAG 1 cut(s) 943
BspMI ACCTGC 1 cut(s) 240
BspPI GGATC 2 cut(s) 872, 980
BsrBI CCGCTC 1 cut(s) 268
BsrDI GCAATG 1 cut(s) 1083
BsrFI RCCGGY 3 cut(s) 30, 94, 106
BsrI ACTGG 1 cut(s) 445
BssAI RCCGGY 3 cut(s) 30, 94, 106
BssECI CCNNGG 4 cut(s) 294, 455, 635, 656
BssMI GATC 5 cut(s) 305, 319, 363, 877, 985
BssNI GRCGYC 1 cut(s) 176
BssT1I CCWWGG 2 cut(s) 635, 656
Bst2UI CCWGG 3 cut(s) 263, 456, 1127
Bst4CI ACNGT 2 cut(s) 172, 547
Bst6I CTCTTC 1 cut(s) 801
BstACI GRCGYC 1 cut(s) 176
BstAPI GCANNNNNTGC 1 cut(s) 1165
BstBAI YACGTR 2 cut(s) 326, 1162
BstC8I GCNNGC 4 cut(s) 96, 108, 125, 194
BstDEI CTNAG 4 cut(s) 279, 309, 837, 903
BstDSI CCRYGG 1 cut(s) 635
BstF5I GGATG 2 cut(s) 913, 1087
BstFNI CGCG 1 cut(s) 380
BstH2I RGCGCY 2 cut(s) 792, 915
BstHHI GCGC 3 cut(s) 464, 791, 914
BstKTI GATC 5 cut(s) 308, 322, 366, 880, 988
BstMAI GTCTC 3 cut(s) 566, 642, 849
BstMBI GATC 5 cut(s) 305, 319, 363, 877, 985
BstMCI CGRYCG 1 cut(s) 52
BstMWI GCNNNNNNNGC 9 cut(s) 45, 107, 208, 274, 812, 920, 929, 938, 1165
BstNI CCWGG 3 cut(s) 263, 456, 1127
BstNSI RCATGY 1 cut(s) 1061
BstSCI CCNGG 5 cut(s) 16, 43, 261, 454, 1125
BstSFI CTRYAG 5 cut(s) 693, 756, 918, 939, 990
BstUI CGCG 1 cut(s) 380
BstV1I GCAGC 7 cut(s) 139, 764, 817, 820, 901, 925, 953
BstX2I RGATCY 1 cut(s) 305
BstYI RGATCY 1 cut(s) 305
Bsu15I ATCGAT 1 cut(s) 366
Bsu36I CCTNAGG 1 cut(s) 279
BsuRI GGCC 5 cut(s) 39, 110, 120, 293, 527
BsuTUI ATCGAT 1 cut(s) 366
BtgI CCRYGG 1 cut(s) 635
BtsCI GGATG 2 cut(s) 913, 1087
BveI ACCTGC 1 cut(s) 240
Cac8I GCNNGC 4 cut(s) 96, 108, 125, 194
CciI TCATGA 2 cut(s) 874, 897
CfoI GCGC 3 cut(s) 464, 791, 914
Cfr10I RCCGGY 3 cut(s) 30, 94, 106
Cfr13I GGNCC 5 cut(s) 109, 118, 143, 421, 442
ClaI ATCGAT 1 cut(s) 366
CseI GACGC 2 cut(s) 184, 331
CsiI ACCWGGT 1 cut(s) 1125
Csp6I GTAC 3 cut(s) 409, 591, 623
CspCI CAANNNNNGTGG 2 cut(s) 698, 733
CviAII CATG 8 cut(s) 337, 616, 636, 701, 844, 875, 898, 1058
CviQI GTAC 3 cut(s) 409, 591, 623
DdeI CTNAG 4 cut(s) 279, 309, 837, 903
DpnI GATC 5 cut(s) 307, 321, 365, 879, 987
DpnII GATC 5 cut(s) 305, 319, 363, 877, 985
DraIII CACNNNGTG 1 cut(s) 1165
DrdI GACNNNNNNGTC 1 cut(s) 1130
DseDI GACNNNNNNGTC 1 cut(s) 1130
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
EciI GGCGGA 1 cut(s) 93
Eco130I CCWWGG 2 cut(s) 635, 656
Eco147I AGGCCT 1 cut(s) 39
Eco24I GRGCYC 1 cut(s) 405
Eco47I GGWCC 3 cut(s) 143, 421, 442
Eco57I CTGAAG 3 cut(s) 227, 293, 1091
Eco72I CACGTG 1 cut(s) 1162
Eco81I CCTNAGG 1 cut(s) 279
Eco88I CYCGRG 2 cut(s) 111, 404
EcoO109I RGGNCCY 1 cut(s) 421
EcoRII CCWGG 3 cut(s) 261, 454, 1125
EcoT14I CCWWGG 2 cut(s) 635, 656
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 2 cut(s) 635, 656
FaeI CATG 8 cut(s) 340, 619, 639, 704, 847, 878, 901, 1061
FatI CATG 8 cut(s) 336, 615, 635, 700, 843, 874, 897, 1057
FblI GTMKAC 1 cut(s) 315
FokI GGATG 2 cut(s) 920, 1094
FriOI GRGCYC 1 cut(s) 405
GlaI GCGC 3 cut(s) 463, 790, 913
GsuI CTGGAG 1 cut(s) 233
HaeII RGCGCY 2 cut(s) 792, 915
HaeIII GGCC 5 cut(s) 39, 110, 120, 293, 527
HapII CCGG 6 cut(s) 17, 31, 44, 95, 107, 199
HgaI GACGC 2 cut(s) 184, 331
HhaI GCGC 3 cut(s) 464, 791, 914
Hin1I GRCGYC 1 cut(s) 176
Hin1II CATG 8 cut(s) 340, 619, 639, 704, 847, 878, 901, 1061
Hin6I GCGC 3 cut(s) 462, 789, 912
HinP1I GCGC 3 cut(s) 462, 789, 912
HincII GTYRAC 1 cut(s) 316
HindII GTYRAC 1 cut(s) 316
HinfI GANTC 2 cut(s) 1051, 1136
HpaII CCGG 6 cut(s) 17, 31, 44, 95, 107, 199
HphI GGTGA 3 cut(s) 184, 499, 624
Hpy166II GTNNAC 2 cut(s) 316, 591
Hpy188I TCNGA 1 cut(s) 168
Hpy188III TCNNGA 7 cut(s) 146, 281, 353, 820, 875, 898, 1114
Hpy8I GTNNAC 2 cut(s) 316, 591
Hpy99I CGWCG 5 cut(s) 172, 320, 347, 394, 397
HpyAV CCTTC 7 cut(s) 70, 133, 283, 744, 779, 1025, 1093
HpyCH4III ACNGT 2 cut(s) 172, 547
HpyCH4IV ACGT 2 cut(s) 325, 1161
HpyF10VI GCNNNNNNNGC 9 cut(s) 45, 107, 208, 274, 812, 920, 929, 938, 1165
HpyF3I CTNAG 4 cut(s) 279, 309, 837, 903
HpySE526I ACGT 2 cut(s) 325, 1161
Hsp92I GRCGYC 1 cut(s) 176
Hsp92II CATG 8 cut(s) 340, 619, 639, 704, 847, 878, 901, 1061
HspAI GCGC 3 cut(s) 462, 789, 912
KroI GCCGGC 2 cut(s) 94, 106
KroNI GCCGGC 2 cut(s) 96, 108
Kzo9I GATC 5 cut(s) 305, 319, 363, 877, 985
LmnI GCTCC 5 cut(s) 106, 201, 265, 358, 451
Lsp1109I GCAGC 7 cut(s) 139, 764, 817, 820, 901, 925, 953
LweI GCATC 2 cut(s) 462, 953
MabI ACCWGGT 1 cut(s) 1125
MaeII ACGT 2 cut(s) 325, 1161
MaeIII GTNAC 3 cut(s) 172, 630, 964
MalI GATC 5 cut(s) 307, 321, 365, 879, 987
MbiI CCGCTC 1 cut(s) 268
MboI GATC 5 cut(s) 305, 319, 363, 877, 985
MboII GAAGA 4 cut(s) 268, 506, 788, 1097
MfeI CAATTG 2 cut(s) 584, 999
MflI RGATCY 1 cut(s) 305
MhlI GDGCHC 1 cut(s) 405
MluCI AATT 6 cut(s) 584, 848, 978, 999, 1065, 1201
MmeI TCCRAC 2 cut(s) 191, 429
MroNI GCCGGC 2 cut(s) 94, 106
MroXI GAANNNNTTC 1 cut(s) 86
MseI TTAA 4 cut(s) 222, 851, 1064, 1200
MslI CAYNNNNRTG 1 cut(s) 470
MspA1I CMGCKG 2 cut(s) 130, 181
MspI CCGG 6 cut(s) 17, 31, 44, 95, 107, 199
MspR9I CCNGG 5 cut(s) 18, 45, 263, 456, 1127
MunI CAATTG 2 cut(s) 584, 999
Mva1269I GAATGC 1 cut(s) 1168
MvaI CCWGG 3 cut(s) 263, 456, 1127
MvnI CGCG 1 cut(s) 380
MwoI GCNNNNNNNGC 9 cut(s) 45, 107, 208, 274, 812, 920, 929, 938, 1165
NaeI GCCGGC 2 cut(s) 96, 108
NciI CCSGG 2 cut(s) 18, 45
NcoI CCATGG 1 cut(s) 635
NdeII GATC 5 cut(s) 305, 319, 363, 877, 985
NgoMIV GCCGGC 2 cut(s) 94, 106
NlaIII CATG 8 cut(s) 340, 619, 639, 704, 847, 878, 901, 1061
NlaIV GGNNCC 4 cut(s) 102, 144, 422, 453
NmeAIII GCCGAG 1 cut(s) 319
NmuCI GTSAC 3 cut(s) 172, 630, 964
NspI RCATGY 1 cut(s) 1061
PaeR7I CTCGAG 1 cut(s) 404
PagI TCATGA 2 cut(s) 874, 897
PceI AGGCCT 1 cut(s) 39
PctI GAATGC 1 cut(s) 1168
PdiI GCCGGC 2 cut(s) 96, 108
PdmI GAANNNNTTC 1 cut(s) 86
PfeI GAWTC 2 cut(s) 1051, 1136
PmaCI CACGTG 1 cut(s) 1162
PmlI CACGTG 1 cut(s) 1162
Ppu21I YACGTR 2 cut(s) 326, 1162
PpuMI RGGWCCY 1 cut(s) 421
PshBI ATTAAT 1 cut(s) 1200
Psp5II RGGWCCY 1 cut(s) 421
Psp6I CCWGG 3 cut(s) 261, 454, 1125
PspCI CACGTG 1 cut(s) 1162
PspGI CCWGG 3 cut(s) 261, 454, 1125
PspN4I GGNNCC 4 cut(s) 102, 144, 422, 453
PspPI GGNCC 5 cut(s) 109, 118, 143, 421, 442
PspPPI RGGWCCY 1 cut(s) 421
PspXI VCTCGAGB 1 cut(s) 404
PsrI GAACNNNNNNTAC 2 cut(s) 1086, 1118
PstI CTGCAG 1 cut(s) 943
PsuI RGATCY 1 cut(s) 305
RsaI GTAC 3 cut(s) 410, 592, 624
RsaNI GTAC 3 cut(s) 409, 591, 623
RseI CAYNNNNRTG 1 cut(s) 470
SalI GTCGAC 1 cut(s) 314
SaqAI TTAA 4 cut(s) 222, 851, 1064, 1200
Sau3AI GATC 5 cut(s) 305, 319, 363, 877, 985
Sau96I GGNCC 5 cut(s) 109, 118, 143, 421, 442
ScaI AGTACT 1 cut(s) 410
ScrFI CCNGG 5 cut(s) 18, 45, 263, 456, 1127
SduI GDGCHC 1 cut(s) 405
SexAI ACCWGGT 1 cut(s) 1125
SfaNI GCATC 2 cut(s) 462, 953
SfcI CTRYAG 5 cut(s) 693, 756, 918, 939, 990
Sfr274I CTCGAG 1 cut(s) 404
SinI GGWCC 3 cut(s) 143, 421, 442
SlaI CTCGAG 1 cut(s) 404
SmiMI CAYNNNNRTG 1 cut(s) 470
SmlI CTYRAG 2 cut(s) 353, 404
SmoI CTYRAG 2 cut(s) 353, 404
Sse9I AATT 6 cut(s) 584, 848, 978, 999, 1065, 1201
SseBI AGGCCT 1 cut(s) 39
SsiI CCGC 9 cut(s) 21, 98, 104, 121, 130, 152, 155, 179, 268
SspI AATATT 1 cut(s) 742
StuI AGGCCT 1 cut(s) 39
StyD4I CCNGG 5 cut(s) 16, 43, 261, 454, 1125
StyI CCWWGG 2 cut(s) 635, 656
TaaI ACNGT 2 cut(s) 172, 547
TaiI ACGT 2 cut(s) 328, 1164
TaqI TCGA 7 cut(s) 90, 315, 366, 405, 435, 1054, 1134
TaqII GACCGA 1 cut(s) 66
TasI AATT 6 cut(s) 584, 848, 978, 999, 1065, 1201
TatI WGTACW 3 cut(s) 408, 590, 622
TauI GCSGC 6 cut(s) 101, 123, 155, 158, 181, 271
TfiI GAWTC 2 cut(s) 1051, 1136
Tru1I TTAA 4 cut(s) 222, 851, 1064, 1200
Tru9I TTAA 4 cut(s) 222, 851, 1064, 1200
TseFI GTSAC 3 cut(s) 172, 630, 964
TseI GCWGC 7 cut(s) 127, 752, 830, 833, 914, 938, 941
Tsp45I GTSAC 3 cut(s) 172, 630, 964
TspDTI ATGAA 3 cut(s) 618, 689, 860
VpaK11BI GGWCC 3 cut(s) 143, 421, 442
VspI ATTAAT 1 cut(s) 1200
XapI RAATTY 1 cut(s) 978
XceI RCATGY 1 cut(s) 1061
XcmI CCANNNNNNNNNTGG 1 cut(s) 452
XhoI CTCGAG 1 cut(s) 404
XmiI GTMKAC 1 cut(s) 315
XmnI GAANNNNTTC 1 cut(s) 86
ZrmI AGTACT 1 cut(s) 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.