Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001373

Physical Location & Seq

Genomic Coordinates Reverse (-)

87471006 .. 87475206

Gene Structure 4201 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG658500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGCAGAGTCCAATACTGGCTGTGATCAGGGTTTGCTTTCCTGATAATACAACATTAGAGGCCACTTTCCATCCATCAGAAACTCTTCAGAGCCTGGTTGATCTCCTCATGAAAGTGGTTGCTCGACCAGAATTATCGTTCCAGATATATACTACTCCTCCTAAGAAGCTGATAAAAGACATGACACAGGACTTCTACTCTGCGGGCTTCGCTCCTGGTGATGATACTGCAGATGTCAAGTCAGGTCCTTTCCTTCACGAAGAGATCATGTCTTTGAATGGTCTGGAACTTGTGAAAGAGCTTGCAGAGCCTGTTCAGACTGCACCGGAGGCTATACAGCAGGCATCACCCCCTGTTGTCCAAGAGAAGAAGCCCGCCAAGAAAAACCTTGTCTATCTCCCTAAAGGCGAACCCGTAGGAGAATCCTCTTCTTCCAGCTCCAATCGTTCCAAGACGAATCTCTCACCACTCGTCTTTCTCCCTACAGGCATACCTCTAGAAGCACCACGGACCATTCTCAATCACCTTCCTGCGCCTCCAGCGGAAGACCGTATGGTCAGGAGAGAAAAAGTTTTTCTTTTTCAAGGATATCCAAGAGTGGAACCCAAGGTGTTGCATGTGTTTTCAGATGGGAGTTACAGTCTTGAGACAACAGCCCCTCCCTCTGCATCATACGTACTTGAACTCATTGGCTATTCCAAAGGCCTAGTCTGTTTCAGAAATCCAGACTTGAGACAGATATGCATTTGGGATTTGGAAGAGCAAACAGTAAGGGAGATGATTGATGATGTCAATGAAGAAGGAGAAGCCTCCTATGGATTTGGGCACAAAACTGGGGGTTTGTACATGATGGTCAGGCTTGGACGCCCACCTCACTCAAGTAAGAATCAAGATTTTATATGGTACTGTGATACTATTCTCGAGGGAGGACGTTGGAGGAGATCTGAGGTTACGGCCGCATGTCTTTTTGTACAGGGTAGACCTGCAACATATGTCTCCCGGAATCACAAAATGTATTGGAAAGCGACAACCGAAGATGGGGTTTGCATCATTGCCTTTGACTTAGAGACTGAGCATTTGGATGAATTGGTAGCCCCTCTTAAACCTAACAGAGACATGGTGCTTGGCCATGGGTTTAAGGGGCAGCTTGCTGCAGCAATCTATGTTCCTCCTACTGGTAGAGAGGGAAGACTCTCTTTCTTGCATATCTGGGTGCTGCTGAAGGAACTTGAGCGGTACCGTTGGCACAAGCTGGTCACTTTACCCTCCAGTGTTTACACTAGTGCAGATGAAGTCTTCATACCCTTGGTGTTCTACTATGGCAAGGAAGACGGAGCGATCAATCTTCTCTTTCACTGGAATATGATGGAAGTTTTGCATATCATACCAGCCGTGCATAAGCATCAGGACCATGGTGTACCATTAAATCATGGCTTCACGAGAGTAGATATCCCCTCTGCCATTCCCTCAGGAATGCAGATGGAGCTTGGATCCTGGAGGAGGTTCCAAGCAACCCCTCTTGGGAATCTCCTCCACCAATCGAAGAAGCACAACGGGCACGAATCTGAAGAGGACAAGAACAACAGAGGCAAGAGAATCATCAGGCTTTGTTGTGAAGATGATGATATAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005886 GO:0008150 GO:0009893 GO:0009987 GO:0010604 GO:0016020 GO:0016043 GO:0019222 GO:0019899 GO:0022411 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032984 GO:0035265 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048589 GO:0050789 GO:0050794 GO:0051117 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071840 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

UBX

Protein Analysis

544

Amino Acids

61.29

Weight (kDa)

6.07

Isoelectric Point (pI)

50.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001373)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27310
fragaria_vesca	FvH4_2g09210 FvH4_3g43800 FvH4_6g52650 FvH4_6g52820 FvH4_6g52860
malus_domestica	MD09G1017300.v1.1 MD10G1138200.v1.1 MD17G1018100.v1.1
prunus_persica	Prupe.3G299600_v2.0.a1 Prupe.3G299600_v2.0.a1 Prupe.8G176800_v2.0.a1
pyrus_communis	pycom05g12990 pycom111g01420
rosa_chinensis	RchiOBHm_Chr2g0174181 RchiOBHm_Chr2g0174441 RchiOBHm_Chr6g0265061
rosa_laevigata	RLG00000014212 RLG00000022254 RLG00000022266 RLG00000022272
rosa_multiflora	Rmu_sc0000954.1_g000001 Rmu_sc0001533.1_g000005 Rmu_sc0003649.1_g000013 Rmu_sc0003649.1_g000018 Rmu_sc0003649.1_g000021 Rmu_ssc0000198.1_g000003 Rmu_ssc0000359.1_g000079
rosa_roxburghii	Rroxscaffold_175G00432130 Rroxscaffold_2G00078080 Rroxscaffold_2G00078110 Rroxscaffold_2G00078140 Rroxscaffold_2G00078190 Rroxscaffold_2G00078380
rosa_rugosa	Rorug02G0575700 Rorug02G0577500 Rorug06G0013300
rosa_samantha	Rh2AG655100 Rh2AG658300 Rh2AG658500 Rh2BG666300 Rh2BG669300 Rh2BG669500 Rh2CG630500 Rh2CG632400 Rh2CG632500 Rh2DG680900 Rh2DG683100 Rh2DG683200
rosa_wichuraiana	Rw2G053770 Rw2G053910 Rw2G053930 Rw6G011780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	554
Acc36I	ACCTGC	1 cut(s)	991
Acc65I	GGTACC	1 cut(s)	1236
AccB1I	GGYRCC	1 cut(s)	1236
AccBSI	CCGCTC	1 cut(s)	1234
AccI	GTMKAC	1 cut(s)	979
AciI	CCGC	5 cut(s)	203, 375, 542, 957, 1234
AclWI	GGATC	2 cut(s)	1485, 1498
AcoI	YGGCCR	2 cut(s)	954, 1126
AcuI	CTGAAG	3 cut(s)	71, 1241, 1587
AcyI	GRCGYC	1 cut(s)	865
AfaI	GTAC	6 cut(s)	678, 845, 905, 972, 1238, 1419
AfiI	CCNNNNNNNGG	4 cut(s)	1038, 1175, 1500, 1521
AgsI	TTSAA	3 cut(s)	277, 584, 683
AhlI	ACTAGT	1 cut(s)	1280
AjnI	CCWGG	3 cut(s)	93, 214, 1493
AluBI	AGCT	6 cut(s)	169, 301, 438, 1147, 1252, 1486
AluI	AGCT	6 cut(s)	169, 301, 438, 1147, 1252, 1486
Alw26I	GTCTC	5 cut(s)	641, 727, 1000, 1061, 1107
AlwI	GGATC	2 cut(s)	1485, 1498
AlwNI	CAGNNNCTG	2 cut(s)	94, 311
Ama87I	CYCGRG	1 cut(s)	920
AoxI	GGCC	4 cut(s)	60, 703, 954, 1126
ApeKI	GCWGC	4 cut(s)	1144, 1151, 1154, 1216
ArsI	GACNNNNNNTTYG	4 cut(s)	693, 725, 1060, 1092
Asp700I	GAANNNNTTC	1 cut(s)	84
Asp718I	GGTACC	1 cut(s)	1236
AspLEI	GCGC	1 cut(s)	535
AspS9I	GGNCC	3 cut(s)	245, 510, 1408
AsuC2I	CCSGG	1 cut(s)	1000
AsuHPI	GGTGA	4 cut(s)	230, 339, 456, 515
AvaI	CYCGRG	1 cut(s)	920
AvaII	GGWCC	3 cut(s)	245, 510, 1408
AxyI	CCTNAGG	1 cut(s)	1468
BaeGI	GKGCMC	2 cut(s)	828, 1560
BalI	TGGCCA	1 cut(s)	1128
BamHI	GGATCC	1 cut(s)	1490
BanI	GGYRCC	1 cut(s)	1236
BarI	GAAGNNNNNNTAC	2 cut(s)	1284, 1316
BauI	CACGAG	1 cut(s)	1438
BbsI	GAAGAC	4 cut(s)	552, 1195, 1288, 1335
BbvI	GCAGC	4 cut(s)	1138, 1156, 1166, 1203
BccI	CCATC	7 cut(s)	78, 82, 623, 844, 1031, 1360, 1474
BceAI	ACGGC	2 cut(s)	969, 1376
BciT130I	CCWGG	3 cut(s)	95, 216, 1495
BclI	TGATCA	1 cut(s)	24
BcnI	CCSGG	1 cut(s)	1000
BcoDI	GTCTC	5 cut(s)	641, 727, 1000, 1061, 1107
BcuI	ACTAGT	1 cut(s)	1280
BfaI	CTAG	3 cut(s)	497, 707, 1281
BfmI	CTRYAG	3 cut(s)	228, 483, 1152
BfuAI	ACCTGC	1 cut(s)	991
BglII	AGATCT	1 cut(s)	941
BisI	GCNGC	5 cut(s)	957, 1145, 1152, 1155, 1217
BlsI	GCNGC	5 cut(s)	958, 1146, 1153, 1156, 1218
Bme1390I	CCNGG	4 cut(s)	95, 216, 1000, 1495
Bme18I	GGWCC	3 cut(s)	245, 510, 1408
BmeT110I	CYCGRG	1 cut(s)	920
BmgT120I	GGNCC	3 cut(s)	245, 510, 1408
BmiI	GGNNCC	4 cut(s)	603, 1238, 1492, 1505
BmrFI	CCNGG	4 cut(s)	95, 216, 1000, 1495
BmrI	ACTGGG	1 cut(s)	843
BmsI	GCATC	4 cut(s)	353, 677, 1056, 1411
BmuI	ACTGGG	1 cut(s)	843
BpiI	GAAGAC	4 cut(s)	552, 1195, 1288, 1335
BpmI	CTGGAG	3 cut(s)	522, 1252, 1516
BpuEI	CTTGAG	4 cut(s)	665, 751, 862, 1250
BpuMI	CCSGG	1 cut(s)	1000
BsaAI	YACGTR	1 cut(s)	676
BsaHI	GRCGYC	1 cut(s)	865
BsaJI	CCNNGG	5 cut(s)	506, 606, 1129, 1305, 1411
BsaWI	WCCGGW	1 cut(s)	325
BsaXI	ACNNNNNCTCC	6 cut(s)	142, 172, 625, 643, 655, 673
Bsc4I	CCNNNNNNNGG	4 cut(s)	1038, 1175, 1500, 1521
Bse1I	ACTGG	5 cut(s)	21, 838, 1180, 1269, 1361
Bse21I	CCTNAGG	1 cut(s)	1468
Bse3DI	GCAATG	1 cut(s)	1050
BseBI	CCWGG	3 cut(s)	95, 216, 1495
BseDI	CCNNGG	5 cut(s)	506, 606, 1129, 1305, 1411
BseGI	GGATG	2 cut(s)	70, 1087
BseLI	CCNNNNNNNGG	4 cut(s)	1038, 1175, 1500, 1521
BseMI	GCAATG	1 cut(s)	1050
BseMII	CTCAG	3 cut(s)	936, 1062, 1482
BseNI	ACTGG	5 cut(s)	21, 838, 1180, 1269, 1361
BseRI	GAGGAG	5 cut(s)	95, 147, 952, 1513, 1520
BseSI	GKGCMC	2 cut(s)	828, 1560
BseX3I	CGGCCG	1 cut(s)	954
BseXI	GCAGC	4 cut(s)	1138, 1156, 1166, 1203
BsgI	GTGCAG	2 cut(s)	306, 1305
Bsh1285I	CGRYCG	1 cut(s)	957
BshFI	GGCC	4 cut(s)	62, 705, 956, 1128
BshNI	GGYRCC	1 cut(s)	1236
BsiEI	CGRYCG	1 cut(s)	957
BsiHKCI	CYCGRG	1 cut(s)	920
BsiSI	CCGG	2 cut(s)	326, 1000
BslI	CCNNNNNNNGG	4 cut(s)	1038, 1175, 1500, 1521
BsmAI	GTCTC	5 cut(s)	641, 727, 1000, 1061, 1107
BsmI	GAATGC	1 cut(s)	1479
BsnI	GGCC	4 cut(s)	62, 705, 956, 1128
BsoBI	CYCGRG	1 cut(s)	920
Bsp1286I	GDGCHC	2 cut(s)	828, 1560
Bsp1407I	TGTACA	2 cut(s)	843, 970
Bsp143I	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
Bsp19I	CCATGG	2 cut(s)	1129, 1411
BspACI	CCGC	5 cut(s)	203, 375, 542, 957, 1234
BspANI	GGCC	4 cut(s)	62, 705, 956, 1128
BspCNI	CTCAG	3 cut(s)	937, 1063, 1481
BspHI	TCATGA	1 cut(s)	108
BspLI	GGNNCC	4 cut(s)	603, 1238, 1492, 1505
BspMAI	CTGCAG	2 cut(s)	232, 1156
BspMI	ACCTGC	1 cut(s)	991
BspPI	GGATC	2 cut(s)	1485, 1498
BspQI	GCTCTTC	1 cut(s)	753
BspT107I	GGYRCC	1 cut(s)	1236
BsrBI	CCGCTC	1 cut(s)	1234
BsrDI	GCAATG	1 cut(s)	1050
BsrGI	TGTACA	2 cut(s)	843, 970
BsrI	ACTGG	5 cut(s)	21, 838, 1180, 1269, 1361
BssECI	CCNNGG	5 cut(s)	506, 606, 1129, 1305, 1411
BssMI	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
BssNI	GRCGYC	1 cut(s)	865
BssSI	CACGAG	1 cut(s)	1438
BssT1I	CCWWGG	4 cut(s)	606, 1129, 1305, 1411
Bst2BI	CACGAG	1 cut(s)	1438
Bst2UI	CCWGG	3 cut(s)	95, 216, 1495
Bst4CI	ACNGT	5 cut(s)	551, 641, 769, 908, 1241
Bst6I	CTCTTC	5 cut(s)	90, 255, 433, 753, 1563
BstACI	GRCGYC	1 cut(s)	865
BstAUI	TGTACA	2 cut(s)	843, 970
BstBAI	YACGTR	1 cut(s)	676
BstC8I	GCNNGC	5 cut(s)	205, 303, 342, 375, 1149
BstDEI	CTNAG	5 cut(s)	162, 945, 1063, 1071, 1468
BstDSI	CCRYGG	3 cut(s)	506, 1129, 1411
BstENI	CCTNNNNNAGG	1 cut(s)	1498
BstF5I	GGATG	2 cut(s)	70, 1087
BstHHI	GCGC	1 cut(s)	535
BstKTI	GATC	6 cut(s)	27, 103, 267, 944, 1341, 1493
BstMAI	GTCTC	5 cut(s)	641, 727, 1000, 1061, 1107
BstMBI	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
BstMCI	CGRYCG	1 cut(s)	957
BstMWI	GCNNNNNNNGC	6 cut(s)	209, 307, 329, 539, 1483, 1555
BstNI	CCWGG	3 cut(s)	95, 216, 1495
BstNSI	RCATGY	2 cut(s)	620, 963
BstSCI	CCNGG	4 cut(s)	93, 214, 998, 1493
BstSFI	CTRYAG	3 cut(s)	228, 483, 1152
BstSLI	GKGCMC	2 cut(s)	828, 1560
BstSNI	TACGTA	1 cut(s)	676
BstV1I	GCAGC	4 cut(s)	1138, 1156, 1166, 1203
BstV2I	GAAGAC	4 cut(s)	552, 1195, 1288, 1335
BstX2I	RGATCY	2 cut(s)	941, 1490
BstYI	RGATCY	2 cut(s)	941, 1490
BstZI	CGGCCG	1 cut(s)	954
Bsu36I	CCTNAGG	1 cut(s)	1468
BsuRI	GGCC	4 cut(s)	62, 705, 956, 1128
BtgI	CCRYGG	3 cut(s)	506, 1129, 1411
BtsCI	GGATG	2 cut(s)	70, 1087
BtsIMutI	CAGTG	2 cut(s)	1276, 1354
BveI	ACCTGC	1 cut(s)	991
Cac8I	GCNNGC	5 cut(s)	205, 303, 342, 375, 1149
CaiI	CAGNNNCTG	2 cut(s)	94, 311
CciI	TCATGA	1 cut(s)	108
CfoI	GCGC	1 cut(s)	535
Cfr13I	GGNCC	3 cut(s)	245, 510, 1408
CseI	GACGC	1 cut(s)	873
Csp6I	GTAC	6 cut(s)	677, 844, 904, 971, 1237, 1418
CviQI	GTAC	6 cut(s)	677, 844, 904, 971, 1237, 1418
DdeI	CTNAG	5 cut(s)	162, 945, 1063, 1071, 1468
DpnI	GATC	6 cut(s)	26, 102, 266, 943, 1340, 1492
DpnII	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
DrdI	GACNNNNNNGTC	1 cut(s)	554
DseDI	GACNNNNNNGTC	1 cut(s)	554
EaeI	YGGCCR	2 cut(s)	954, 1126
EagI	CGGCCG	1 cut(s)	954
Eam1104I	CTCTTC	5 cut(s)	90, 255, 433, 753, 1563
EarI	CTCTTC	5 cut(s)	90, 255, 433, 753, 1563
EclXI	CGGCCG	1 cut(s)	954
Eco105I	TACGTA	1 cut(s)	676
Eco130I	CCWWGG	4 cut(s)	606, 1129, 1305, 1411
Eco147I	AGGCCT	1 cut(s)	705
Eco32I	GATATC	2 cut(s)	590, 1450
Eco47I	GGWCC	3 cut(s)	245, 510, 1408
Eco52I	CGGCCG	1 cut(s)	954
Eco57I	CTGAAG	3 cut(s)	71, 1241, 1587
Eco81I	CCTNAGG	1 cut(s)	1468
Eco88I	CYCGRG	1 cut(s)	920
EcoNI	CCTNNNNNAGG	1 cut(s)	1498
EcoO109I	RGGNCCY	1 cut(s)	245
EcoRII	CCWGG	3 cut(s)	93, 214, 1493
EcoRV	GATATC	2 cut(s)	590, 1450
EcoT14I	CCWWGG	4 cut(s)	606, 1129, 1305, 1411
EcoT22I	ATGCAT	1 cut(s)	746
ErhI	CCWWGG	4 cut(s)	606, 1129, 1305, 1411
FalI	AAGNNNNNCTT	4 cut(s)	561, 593, 1180, 1212
FauI	CCCGC	2 cut(s)	196, 382
FauNDI	CATATG	1 cut(s)	991
FbaI	TGATCA	1 cut(s)	24
FblI	GTMKAC	1 cut(s)	979
Fnu4HI	GCNGC	5 cut(s)	957, 1145, 1152, 1155, 1217
FokI	GGATG	2 cut(s)	57, 1094
Fsp4HI	GCNGC	5 cut(s)	957, 1145, 1152, 1155, 1217
FspBI	CTAG	3 cut(s)	497, 707, 1281
GlaI	GCGC	1 cut(s)	534
GluI	GCNGC	5 cut(s)	957, 1145, 1152, 1155, 1217
GsuI	CTGGAG	3 cut(s)	522, 1252, 1516
HaeIII	GGCC	4 cut(s)	62, 705, 956, 1128
HapII	CCGG	2 cut(s)	326, 1000
HgaI	GACGC	1 cut(s)	873
HhaI	GCGC	1 cut(s)	535
Hin1I	GRCGYC	1 cut(s)	865
Hin6I	GCGC	1 cut(s)	533
HinP1I	GCGC	1 cut(s)	533
HinfI	GANTC	9 cut(s)	7, 422, 457, 886, 1003, 1191, 1525, 1562, 1596
HpaII	CCGG	2 cut(s)	326, 1000
HphI	GGTGA	4 cut(s)	230, 339, 456, 515
Hpy166II	GTNNAC	3 cut(s)	980, 1276, 1418
Hpy188I	TCNGA	7 cut(s)	79, 90, 318, 628, 719, 946, 1567
Hpy8I	GTNNAC	3 cut(s)	980, 1276, 1418
HpyAV	CCTTC	4 cut(s)	263, 536, 794, 1216
HpyCH4III	ACNGT	5 cut(s)	551, 641, 769, 908, 1241
HpyCH4IV	ACGT	2 cut(s)	675, 931
HpyF10VI	GCNNNNNNNGC	6 cut(s)	209, 307, 329, 539, 1483, 1555
HpyF3I	CTNAG	5 cut(s)	162, 945, 1063, 1071, 1468
HpySE526I	ACGT	2 cut(s)	675, 931
Hsp92I	GRCGYC	1 cut(s)	865
HspAI	GCGC	1 cut(s)	533
KpnI	GGTACC	1 cut(s)	1240
Ksp22I	TGATCA	1 cut(s)	24
Kzo9I	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
LguI	GCTCTTC	1 cut(s)	753
LmnI	GCTCC	4 cut(s)	217, 443, 1334, 1483
Lsp1109I	GCAGC	4 cut(s)	1138, 1156, 1166, 1203
LweI	GCATC	4 cut(s)	353, 677, 1056, 1411
MaeI	CTAG	3 cut(s)	497, 707, 1281
MaeII	ACGT	2 cut(s)	675, 931
MaeIII	GTNAC	3 cut(s)	635, 949, 1255
MalI	GATC	6 cut(s)	26, 102, 266, 943, 1340, 1492
MbiI	CCGCTC	1 cut(s)	1234
MboI	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
MflI	RGATCY	2 cut(s)	941, 1490
MhlI	GDGCHC	2 cut(s)	828, 1560
MlsI	TGGCCA	1 cut(s)	1128
MluCI	AATT	2 cut(s)	131, 1085
MluNI	TGGCCA	1 cut(s)	1128
MlyI	GAGTC	2 cut(s)	16, 1185
MmeI	TCCRAC	1 cut(s)	914
Mox20I	TGGCCA	1 cut(s)	1128
Mph1103I	ATGCAT	1 cut(s)	746
MroXI	GAANNNNTTC	1 cut(s)	84
MscI	TGGCCA	1 cut(s)	1128
MseI	TTAA	3 cut(s)	1101, 1137, 1424
MslI	CAYNNNNRTG	2 cut(s)	113, 1080
Msp20I	TGGCCA	1 cut(s)	1128
MspA1I	CMGCKG	1 cut(s)	542
MspI	CCGG	2 cut(s)	326, 1000
MspR9I	CCNGG	4 cut(s)	95, 216, 1000, 1495
Mva1269I	GAATGC	1 cut(s)	1479
MvaI	CCWGG	3 cut(s)	95, 216, 1495
MwoI	GCNNNNNNNGC	6 cut(s)	209, 307, 329, 539, 1483, 1555
NciI	CCSGG	1 cut(s)	1000
NcoI	CCATGG	2 cut(s)	1129, 1411
NdeI	CATATG	1 cut(s)	991
NdeII	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
NlaIV	GGNNCC	4 cut(s)	603, 1238, 1492, 1505
NmuCI	GTSAC	1 cut(s)	1255
NsiI	ATGCAT	1 cut(s)	746
NspI	RCATGY	2 cut(s)	620, 963
PaeR7I	CTCGAG	1 cut(s)	920
PagI	TCATGA	1 cut(s)	108
PceI	AGGCCT	1 cut(s)	705
PciSI	GCTCTTC	1 cut(s)	753
PctI	GAATGC	1 cut(s)	1479
PdmI	GAANNNNTTC	1 cut(s)	84
PfeI	GAWTC	7 cut(s)	422, 457, 886, 1003, 1525, 1562, 1596
PfoI	TCCNGGA	2 cut(s)	998, 1493
PkrI	GCNGC	5 cut(s)	958, 1146, 1153, 1156, 1218
PleI	GAGTC	2 cut(s)	15, 1185
PpsI	GAGTC	2 cut(s)	15, 1185
Ppu21I	YACGTR	1 cut(s)	676
PpuMI	RGGWCCY	1 cut(s)	245
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	3 cut(s)	93, 214, 1493
PspGI	CCWGG	3 cut(s)	93, 214, 1493
PspN4I	GGNNCC	4 cut(s)	603, 1238, 1492, 1505
PspPI	GGNCC	3 cut(s)	245, 510, 1408
PspPPI	RGGWCCY	1 cut(s)	245
PstI	CTGCAG	2 cut(s)	232, 1156
PstNI	CAGNNNCTG	2 cut(s)	94, 311
PsuI	RGATCY	2 cut(s)	941, 1490
RsaI	GTAC	6 cut(s)	678, 845, 905, 972, 1238, 1419
RsaNI	GTAC	6 cut(s)	677, 844, 904, 971, 1237, 1418
RseI	CAYNNNNRTG	2 cut(s)	113, 1080
SapI	GCTCTTC	1 cut(s)	753
SaqAI	TTAA	3 cut(s)	1101, 1137, 1424
SatI	GCNGC	5 cut(s)	957, 1145, 1152, 1155, 1217
Sau3AI	GATC	6 cut(s)	24, 100, 264, 941, 1338, 1490
Sau96I	GGNCC	3 cut(s)	245, 510, 1408
SchI	GAGTC	2 cut(s)	16, 1185
ScrFI	CCNGG	4 cut(s)	95, 216, 1000, 1495
SduI	GDGCHC	2 cut(s)	828, 1560
SfaNI	GCATC	4 cut(s)	353, 677, 1056, 1411
SfcI	CTRYAG	3 cut(s)	228, 483, 1152
Sfr274I	CTCGAG	1 cut(s)	920
SinI	GGWCC	3 cut(s)	245, 510, 1408
SlaI	CTCGAG	1 cut(s)	920
SmiMI	CAYNNNNRTG	2 cut(s)	113, 1080
SmlI	CTYRAG	5 cut(s)	644, 730, 877, 920, 1229
SmoI	CTYRAG	5 cut(s)	644, 730, 877, 920, 1229
SnaBI	TACGTA	1 cut(s)	676
SpeI	ACTAGT	1 cut(s)	1280
Sse9I	AATT	2 cut(s)	131, 1085
SseBI	AGGCCT	1 cut(s)	705
SsiI	CCGC	5 cut(s)	203, 375, 542, 957, 1234
SspMI	CTAG	3 cut(s)	497, 707, 1281
StuI	AGGCCT	1 cut(s)	705
StyD4I	CCNGG	4 cut(s)	93, 214, 998, 1493
StyI	CCWWGG	4 cut(s)	606, 1129, 1305, 1411
TaaI	ACNGT	5 cut(s)	551, 641, 769, 908, 1241
TaiI	ACGT	2 cut(s)	678, 934
TaqI	TCGA	3 cut(s)	124, 921, 1541
TasI	AATT	2 cut(s)	131, 1085
TatI	WGTACW	2 cut(s)	843, 970
TauI	GCSGC	1 cut(s)	959
TfiI	GAWTC	7 cut(s)	422, 457, 886, 1003, 1525, 1562, 1596
Tru1I	TTAA	3 cut(s)	1101, 1137, 1424
Tru9I	TTAA	3 cut(s)	1101, 1137, 1424
TscAI	CASTG	2 cut(s)	1276, 1361
TseFI	GTSAC	1 cut(s)	1255
TseI	GCWGC	4 cut(s)	1144, 1151, 1154, 1216
Tsp45I	GTSAC	1 cut(s)	1255
TspDTI	ATGAA	5 cut(s)	125, 810, 1098, 1288, 1305
TspGWI	ACGGA	2 cut(s)	523, 1347
TspRI	CASTG	2 cut(s)	1276, 1361
VpaK11BI	GGWCC	3 cut(s)	245, 510, 1408
XagI	CCTNNNNNAGG	1 cut(s)	1498
XbaI	TCTAGA	1 cut(s)	496
XceI	RCATGY	2 cut(s)	620, 963
XhoI	CTCGAG	1 cut(s)	920
XmiI	GTMKAC	1 cut(s)	979
XmnI	GAANNNNTTC	1 cut(s)	84
XspI	CTAG	3 cut(s)	497, 707, 1281
Zsp2I	ATGCAT	1 cut(s)	746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.