Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001373

Physical Location & Seq

Genomic Coordinates Reverse (-)

81625566 .. 81629537

Gene Structure 3972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G053910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGAAAGGCAGAGGAGAATCCTCTTCATCGGCCTCCGATTGTTCCAAGACGAATCTCCCACCACTCGTCTCTCTCCCCAAAGGCGAGCCTCTAGAAGAAGCCAAGGCCAAGCTCACGGCAGCAAAAGAAAAGTTTGGGAGGGAAATTCGTGTTTTCGAAACGGCACCATCTTCTTCTTTGCAAAATGCAGAGTCCAATACTGATAAGTTCCTGAAAACACGAAAGGATACAGAGCCAGAAAAGGCAGCCCGCAGGTCAAGGATAACAAAGGCTGTGATCAGGGTTTGCTTTCCTGATAATACAACATTAGAGGCCACTTTCCATCCATCAGAAACACTTCAGAGCCTGGTTGATCTCCTCATGAAAGTGAGTCTGACATTTACATATGCAGATACTACTCCTCCTAAGAAGCTGATAAAAGACATGACACAGGACTTCTACTCTGCTGGCTTCGCTCCTGGTGCAATTATATATTTTTCATATGATATTCCAAAAGGTGATGATACTGCAGATGTCAAGTCAGGTCCTTTCCTTCACGAAGAGATCATGTCTTTGAATGGTCTGGAACTTGTGAAAGAGCTTGCAGAGCCTGTTCAGACTGCACCGGAGGCTATACAGCAGGCATCACCCCCTGTTGTCCAAGAGAAGAAGCCCGCCAAGAAAAACCTTGTCTATCTCCCTAAAGGCGAACCCGTAGGAGAATCCTCTTCTTCCAGCTCCAATCGTTCCAAGACGAATCTCTCACCACTCGTCTTTCTCCCTACAGGCATACCTCTAGAAGCACCACGGACCATTCTCAATCACCTTCCTGCGCCTCCAGCGGAAGACCGTATTGGTCAGGAGAGAAAAAATGGGAGTTACAGTCTTGAGACAACAGCCCCTCCCTCTGCATCATACGTACTTGAACTCATTGGCTATTCCAAAGGCCTAGTCTGTTTCAGAAATCCAGACTTGAGACAGATATGCATTTGGGATTTGGAAGAGCAAACAGTAAGGGAGATGATTGATGATGTCAATGAAGAAGGAGAAGCCTCCTATGGATTTGGGCACAAAACTGGGGGTTTGTACATGATGGTCAGGCTTGGACGCCCACCTCACTCAACTAAGAATCAAGATTTTATATGGTACTGTGATACTATTCTCGAGGGAGGACGTTGGAGGAGATCTGAGGTTACGGCCGCATGTCTTTTTGTACAGGGTAGACCTGCAACATATGTCTCCCAGAATCACAAAATGTATTGGAAAGCAACAACCGAAGATGGGGTTTGCATCATTGCCTTTGACTTAGAGACTGAGCATTTGGGTGAATTGGTAGCCCCTCTTAAACCTAACAGAGACATGGTGCTTGGCCATGGGTTTAAGGGGCAGCTTGCTGCAGCAATCTATGTTCCTCCTACGGAACTTGAGCGGTACCGTTGGCACAAGCTGGTCACTTTACCCTCCAGTGTTTACACTAGTGCAGATGAAGTCTTCATACCCTTGGTGTTCTACTATGGCAAGGAAGACGGAGCGATCAATCTTCTCTTTCACTTGAATATGATCGAAGTTTTGCATATCATACCAGCCGTGCATAAGCATCAGGACCATGGTGTACCATTAAATCATGGCTTCACGAGAGTAGATATCCCCTCTGCCATTCCCTCAGGAATGCAGATGGAGCTTGGATCTTGGAGGAGGTTCCAAGCAACCCCTCTTGAGAATCTCCTCCACCGATCGAAGAAGCACAATGGGCACAAATCTGAAGAGGACAAGAACAACAGAGGCAAGAGAATCATCAGGCTTTGTTGTGAAGATGATGATATAGGTATGAGATGGCGCTTTATACTGCTTGCTGGTGACAGGATGAACTGTAAAGGAGATGTTAGAGACTTGGAGCGGTTAGGAAGGTTAATCCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005886 GO:0008150 GO:0009893 GO:0009987 GO:0010604 GO:0016020 GO:0016043 GO:0019222 GO:0019899 GO:0022411 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032984 GO:0035265 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048589 GO:0050789 GO:0050794 GO:0051117 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071840 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

UBX

Protein Analysis

632

Amino Acids

70.76

Weight (kDa)

6.83

Isoelectric Point (pI)

49.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001373)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27310
fragaria_vesca	FvH4_2g09210 FvH4_3g43800 FvH4_6g52650 FvH4_6g52820 FvH4_6g52860
malus_domestica	MD09G1017300.v1.1 MD10G1138200.v1.1 MD17G1018100.v1.1
prunus_persica	Prupe.3G299600_v2.0.a1 Prupe.3G299600_v2.0.a1 Prupe.8G176800_v2.0.a1
pyrus_communis	pycom05g12990 pycom111g01420
rosa_chinensis	RchiOBHm_Chr2g0174181 RchiOBHm_Chr2g0174441 RchiOBHm_Chr6g0265061
rosa_laevigata	RLG00000014212 RLG00000022254 RLG00000022266 RLG00000022272
rosa_multiflora	Rmu_sc0000954.1_g000001 Rmu_sc0001533.1_g000005 Rmu_sc0003649.1_g000013 Rmu_sc0003649.1_g000018 Rmu_sc0003649.1_g000021 Rmu_ssc0000198.1_g000003 Rmu_ssc0000359.1_g000079
rosa_roxburghii	Rroxscaffold_175G00432130 Rroxscaffold_2G00078080 Rroxscaffold_2G00078110 Rroxscaffold_2G00078140 Rroxscaffold_2G00078190 Rroxscaffold_2G00078380
rosa_rugosa	Rorug02G0575700 Rorug02G0577500 Rorug06G0013300
rosa_samantha	Rh2AG655100 Rh2AG658300 Rh2AG658500 Rh2BG666300 Rh2BG669300 Rh2BG669500 Rh2CG630500 Rh2CG632400 Rh2CG632500 Rh2DG680900 Rh2DG683100 Rh2DG683200
rosa_wichuraiana	Rw2G053770 Rw2G053910 Rw2G053930 Rw6G011780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	243, 1213
Acc65I	GGTACC	1 cut(s)	1410
AccB1I	GGYRCC	2 cut(s)	163, 1410
AccBSI	CCGCTC	2 cut(s)	1408, 1876
AccI	GTMKAC	1 cut(s)	1201
AciI	CCGC	6 cut(s)	250, 654, 821, 1179, 1408, 1876
AclWI	GGATC	1 cut(s)	1672
AcoI	YGGCCR	2 cut(s)	1176, 1348
AcsI	RAATTY	1 cut(s)	144
AcuI	CTGAAG	2 cut(s)	323, 1761
AcyI	GRCGYC	1 cut(s)	1087
AfaI	GTAC	6 cut(s)	900, 1067, 1127, 1194, 1412, 1593
AfiI	CCNNNNNNNGG	1 cut(s)	1260
AgsI	TTSAA	3 cut(s)	556, 905, 1534
AhlI	ACTAGT	1 cut(s)	1454
AjnI	CCWGG	2 cut(s)	345, 457
AjuI	GAANNNNNNNTTGG	2 cut(s)	816, 848
AluBI	AGCT	7 cut(s)	112, 412, 580, 717, 1369, 1426, 1660
AluI	AGCT	7 cut(s)	112, 412, 580, 717, 1369, 1426, 1660
Alw26I	GTCTC	7 cut(s)	73, 863, 949, 1222, 1283, 1329, 1860
AlwI	GGATC	1 cut(s)	1672
AlwNI	CAGNNNCTG	2 cut(s)	346, 590
Ama87I	CYCGRG	1 cut(s)	1142
AoxI	GGCC	6 cut(s)	30, 105, 312, 925, 1176, 1348
ApeKI	GCWGC	5 cut(s)	119, 245, 1366, 1373, 1376
ApoI	RAATTY	1 cut(s)	144
ArsI	GACNNNNNNTTYG	4 cut(s)	915, 947, 1282, 1314
Asp700I	GAANNNNTTC	1 cut(s)	336
Asp718I	GGTACC	1 cut(s)	1410
AspLEI	GCGC	2 cut(s)	814, 1818
AspS9I	GGNCC	3 cut(s)	524, 789, 1582
AsuHPI	GGTGA	6 cut(s)	509, 618, 735, 794, 1316, 1847
AsuII	TTCGAA	1 cut(s)	156
AvaI	CYCGRG	1 cut(s)	1142
AvaII	GGWCC	3 cut(s)	524, 789, 1582
AxyI	CCTNAGG	1 cut(s)	1642
BaeGI	GKGCMC	2 cut(s)	1050, 1734
BalI	TGGCCA	1 cut(s)	1350
BanI	GGYRCC	2 cut(s)	163, 1410
BarI	GAAGNNNNNNTAC	2 cut(s)	1458, 1490
BauI	CACGAG	1 cut(s)	1612
BbsI	GAAGAC	3 cut(s)	831, 1462, 1509
BbvI	GCAGC	5 cut(s)	131, 257, 1360, 1378, 1388
BccI	CCATC	7 cut(s)	175, 330, 334, 1066, 1253, 1648, 1806
BceAI	ACGGC	4 cut(s)	132, 177, 1191, 1550
BciT130I	CCWGG	2 cut(s)	347, 459
BciVI	GTATCC	1 cut(s)	220
BclI	TGATCA	1 cut(s)	276
BcoDI	GTCTC	7 cut(s)	73, 863, 949, 1222, 1283, 1329, 1860
BcuI	ACTAGT	1 cut(s)	1454
BfaI	CTAG	4 cut(s)	92, 776, 929, 1455
BfmI	CTRYAG	3 cut(s)	507, 762, 1374
BfoI	RGCGCY	1 cut(s)	1819
BfuAI	ACCTGC	2 cut(s)	243, 1213
BfuI	GTATCC	1 cut(s)	220
BglII	AGATCT	1 cut(s)	1163
BisI	GCNGC	6 cut(s)	120, 246, 1179, 1367, 1374, 1377
BlsI	GCNGC	6 cut(s)	121, 247, 1180, 1368, 1375, 1378
Bme1390I	CCNGG	2 cut(s)	347, 459
Bme18I	GGWCC	3 cut(s)	524, 789, 1582
BmeT110I	CYCGRG	1 cut(s)	1142
BmgT120I	GGNCC	3 cut(s)	524, 789, 1582
BmiI	GGNNCC	3 cut(s)	165, 1412, 1679
BmrFI	CCNGG	2 cut(s)	347, 459
BmrI	ACTGGG	1 cut(s)	1065
BmsI	GCATC	4 cut(s)	632, 899, 1278, 1585
BmuI	ACTGGG	1 cut(s)	1065
BpiI	GAAGAC	3 cut(s)	831, 1462, 1509
BpmI	CTGGAG	2 cut(s)	801, 1426
Bpu14I	TTCGAA	1 cut(s)	156
BpuEI	CTTGAG	4 cut(s)	887, 973, 1424, 1715
BsaAI	YACGTR	1 cut(s)	898
BsaHI	GRCGYC	1 cut(s)	1087
BsaJI	CCNNGG	5 cut(s)	102, 785, 1351, 1479, 1585
BsaWI	WCCGGW	1 cut(s)	604
BsaXI	ACNNNNNCTCC	6 cut(s)	385, 415, 847, 865, 877, 895
Bsc4I	CCNNNNNNNGG	1 cut(s)	1260
Bse1I	ACTGG	2 cut(s)	1060, 1443
Bse21I	CCTNAGG	1 cut(s)	1642
Bse3DI	GCAATG	1 cut(s)	1272
BseBI	CCWGG	2 cut(s)	347, 459
BseDI	CCNNGG	5 cut(s)	102, 785, 1351, 1479, 1585
BseGI	GGATG	2 cut(s)	322, 1848
BseLI	CCNNNNNNNGG	1 cut(s)	1260
BseMI	GCAATG	1 cut(s)	1272
BseMII	CTCAG	3 cut(s)	1158, 1284, 1656
BseNI	ACTGG	2 cut(s)	1060, 1443
BseRI	GAGGAG	6 cut(s)	27, 347, 390, 1174, 1687, 1694
BseSI	GKGCMC	2 cut(s)	1050, 1734
BseX3I	CGGCCG	1 cut(s)	1176
BseXI	GCAGC	5 cut(s)	131, 257, 1360, 1378, 1388
BsgI	GTGCAG	2 cut(s)	585, 1479
Bsh1285I	CGRYCG	2 cut(s)	1179, 1715
BshFI	GGCC	6 cut(s)	32, 107, 314, 927, 1178, 1350
BshNI	GGYRCC	2 cut(s)	163, 1410
BsiEI	CGRYCG	2 cut(s)	1179, 1715
BsiHKCI	CYCGRG	1 cut(s)	1142
BsiSI	CCGG	1 cut(s)	605
BslI	CCNNNNNNNGG	1 cut(s)	1260
BsmAI	GTCTC	7 cut(s)	73, 863, 949, 1222, 1283, 1329, 1860
BsmBI	CGTCTC	1 cut(s)	73
BsmI	GAATGC	1 cut(s)	1653
BsnI	GGCC	6 cut(s)	32, 107, 314, 927, 1178, 1350
BsoBI	CYCGRG	1 cut(s)	1142
Bsp119I	TTCGAA	1 cut(s)	156
Bsp1286I	GDGCHC	2 cut(s)	1050, 1734
Bsp1407I	TGTACA	2 cut(s)	1065, 1192
Bsp143I	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
Bsp19I	CCATGG	2 cut(s)	1351, 1585
BspACI	CCGC	6 cut(s)	250, 654, 821, 1179, 1408, 1876
BspANI	GGCC	6 cut(s)	32, 107, 314, 927, 1178, 1350
BspCNI	CTCAG	3 cut(s)	1159, 1285, 1655
BspHI	TCATGA	1 cut(s)	360
BspLI	GGNNCC	3 cut(s)	165, 1412, 1679
BspMAI	CTGCAG	2 cut(s)	511, 1378
BspMI	ACCTGC	2 cut(s)	243, 1213
BspPI	GGATC	1 cut(s)	1672
BspQI	GCTCTTC	1 cut(s)	975
BspT104I	TTCGAA	1 cut(s)	156
BspT107I	GGYRCC	2 cut(s)	163, 1410
BsrBI	CCGCTC	2 cut(s)	1408, 1876
BsrDI	GCAATG	1 cut(s)	1272
BsrGI	TGTACA	2 cut(s)	1065, 1192
BsrI	ACTGG	2 cut(s)	1060, 1443
BssECI	CCNNGG	5 cut(s)	102, 785, 1351, 1479, 1585
BssMI	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
BssNI	GRCGYC	1 cut(s)	1087
BssSI	CACGAG	1 cut(s)	1612
BssT1I	CCWWGG	4 cut(s)	102, 1351, 1479, 1585
Bst2BI	CACGAG	1 cut(s)	1612
Bst2UI	CCWGG	2 cut(s)	347, 459
Bst4CI	ACNGT	6 cut(s)	830, 863, 991, 1130, 1415, 1850
Bst6I	CTCTTC	5 cut(s)	28, 534, 712, 975, 1737
BstACI	GRCGYC	1 cut(s)	1087
BstAUI	TGTACA	2 cut(s)	1065, 1192
BstBAI	YACGTR	1 cut(s)	898
BstBI	TTCGAA	1 cut(s)	156
BstC8I	GCNNGC	8 cut(s)	86, 250, 448, 582, 621, 654, 1371, 1830
BstDEI	CTNAG	6 cut(s)	405, 1104, 1167, 1285, 1293, 1642
BstDSI	CCRYGG	3 cut(s)	785, 1351, 1585
BstF5I	GGATG	2 cut(s)	322, 1848
BstH2I	RGCGCY	1 cut(s)	1819
BstHHI	GCGC	2 cut(s)	814, 1818
BstKTI	GATC	8 cut(s)	279, 355, 546, 1166, 1515, 1542, 1667, 1715
BstMAI	GTCTC	7 cut(s)	73, 863, 949, 1222, 1283, 1329, 1860
BstMBI	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
BstMCI	CGRYCG	2 cut(s)	1179, 1715
BstMWI	GCNNNNNNNGC	7 cut(s)	452, 461, 586, 608, 818, 1657, 1729
BstNI	CCWGG	2 cut(s)	347, 459
BstNSI	RCATGY	1 cut(s)	1185
BstSCI	CCNGG	2 cut(s)	345, 457
BstSFI	CTRYAG	3 cut(s)	507, 762, 1374
BstSLI	GKGCMC	2 cut(s)	1050, 1734
BstSNI	TACGTA	1 cut(s)	898
BstV1I	GCAGC	5 cut(s)	131, 257, 1360, 1378, 1388
BstV2I	GAAGAC	3 cut(s)	831, 1462, 1509
BstX2I	RGATCY	2 cut(s)	1163, 1664
BstYI	RGATCY	2 cut(s)	1163, 1664
BstZI	CGGCCG	1 cut(s)	1176
Bsu36I	CCTNAGG	1 cut(s)	1642
BsuI	GTATCC	1 cut(s)	220
BsuRI	GGCC	6 cut(s)	32, 107, 314, 927, 1178, 1350
BtgI	CCRYGG	3 cut(s)	785, 1351, 1585
BtsCI	GGATG	2 cut(s)	322, 1848
BtsIMutI	CAGTG	1 cut(s)	1450
BveI	ACCTGC	2 cut(s)	243, 1213
Cac8I	GCNNGC	8 cut(s)	86, 250, 448, 582, 621, 654, 1371, 1830
CaiI	CAGNNNCTG	2 cut(s)	346, 590
CciI	TCATGA	1 cut(s)	360
CfoI	GCGC	2 cut(s)	814, 1818
Cfr13I	GGNCC	3 cut(s)	524, 789, 1582
CseI	GACGC	1 cut(s)	1095
Csp6I	GTAC	6 cut(s)	899, 1066, 1126, 1193, 1411, 1592
CviAII	CATG	9 cut(s)	361, 424, 547, 1069, 1182, 1339, 1352, 1586, 1604
CviQI	GTAC	6 cut(s)	899, 1066, 1126, 1193, 1411, 1592
DdeI	CTNAG	6 cut(s)	405, 1104, 1167, 1285, 1293, 1642
DpnI	GATC	8 cut(s)	278, 354, 545, 1165, 1514, 1541, 1666, 1714
DpnII	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
EaeI	YGGCCR	2 cut(s)	1176, 1348
EagI	CGGCCG	1 cut(s)	1176
Eam1104I	CTCTTC	5 cut(s)	28, 534, 712, 975, 1737
EarI	CTCTTC	5 cut(s)	28, 534, 712, 975, 1737
EclXI	CGGCCG	1 cut(s)	1176
Eco105I	TACGTA	1 cut(s)	898
Eco130I	CCWWGG	4 cut(s)	102, 1351, 1479, 1585
Eco147I	AGGCCT	1 cut(s)	927
Eco32I	GATATC	1 cut(s)	1624
Eco47I	GGWCC	3 cut(s)	524, 789, 1582
Eco52I	CGGCCG	1 cut(s)	1176
Eco57I	CTGAAG	2 cut(s)	323, 1761
Eco81I	CCTNAGG	1 cut(s)	1642
Eco88I	CYCGRG	1 cut(s)	1142
EcoO109I	RGGNCCY	1 cut(s)	524
EcoRII	CCWGG	2 cut(s)	345, 457
EcoRV	GATATC	1 cut(s)	1624
EcoT14I	CCWWGG	4 cut(s)	102, 1351, 1479, 1585
EcoT22I	ATGCAT	1 cut(s)	968
ErhI	CCWWGG	4 cut(s)	102, 1351, 1479, 1585
Esp3I	CGTCTC	1 cut(s)	73
FaeI	CATG	9 cut(s)	364, 427, 550, 1072, 1185, 1342, 1355, 1589, 1607
FatI	CATG	9 cut(s)	360, 423, 546, 1068, 1181, 1338, 1351, 1585, 1603
FauI	CCCGC	2 cut(s)	257, 661
FauNDI	CATATG	3 cut(s)	385, 481, 1213
FbaI	TGATCA	1 cut(s)	276
FblI	GTMKAC	1 cut(s)	1201
Fnu4HI	GCNGC	6 cut(s)	120, 246, 1179, 1367, 1374, 1377
FokI	GGATG	2 cut(s)	309, 1855
Fsp4HI	GCNGC	6 cut(s)	120, 246, 1179, 1367, 1374, 1377
FspBI	CTAG	4 cut(s)	92, 776, 929, 1455
GlaI	GCGC	2 cut(s)	813, 1817
GluI	GCNGC	6 cut(s)	120, 246, 1179, 1367, 1374, 1377
GsuI	CTGGAG	2 cut(s)	801, 1426
HaeII	RGCGCY	1 cut(s)	1819
HaeIII	GGCC	6 cut(s)	32, 107, 314, 927, 1178, 1350
HapII	CCGG	1 cut(s)	605
HgaI	GACGC	1 cut(s)	1095
HhaI	GCGC	2 cut(s)	814, 1818
Hin1I	GRCGYC	1 cut(s)	1087
Hin1II	CATG	9 cut(s)	364, 427, 550, 1072, 1185, 1342, 1355, 1589, 1607
Hin6I	GCGC	2 cut(s)	812, 1816
HinP1I	GCGC	2 cut(s)	812, 1816
HpaII	CCGG	1 cut(s)	605
HphI	GGTGA	6 cut(s)	509, 618, 735, 794, 1316, 1847
Hpy166II	GTNNAC	3 cut(s)	1202, 1450, 1592
Hpy188I	TCNGA	8 cut(s)	37, 331, 342, 375, 597, 941, 1168, 1741
Hpy8I	GTNNAC	3 cut(s)	1202, 1450, 1592
HpyAV	CCTTC	4 cut(s)	542, 815, 1016, 1878
HpyCH4III	ACNGT	6 cut(s)	830, 863, 991, 1130, 1415, 1850
HpyCH4IV	ACGT	2 cut(s)	897, 1153
HpyF10VI	GCNNNNNNNGC	7 cut(s)	452, 461, 586, 608, 818, 1657, 1729
HpyF3I	CTNAG	6 cut(s)	405, 1104, 1167, 1285, 1293, 1642
HpySE526I	ACGT	2 cut(s)	897, 1153
Hsp92I	GRCGYC	1 cut(s)	1087
Hsp92II	CATG	9 cut(s)	364, 427, 550, 1072, 1185, 1342, 1355, 1589, 1607
HspAI	GCGC	2 cut(s)	812, 1816
KpnI	GGTACC	1 cut(s)	1414
Ksp22I	TGATCA	1 cut(s)	276
Kzo9I	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
LguI	GCTCTTC	1 cut(s)	975
LmnI	GCTCC	5 cut(s)	460, 722, 1508, 1657, 1873
Lsp1109I	GCAGC	5 cut(s)	131, 257, 1360, 1378, 1388
LweI	GCATC	4 cut(s)	632, 899, 1278, 1585
MaeI	CTAG	4 cut(s)	92, 776, 929, 1455
MaeII	ACGT	2 cut(s)	897, 1153
MaeIII	GTNAC	4 cut(s)	857, 1171, 1429, 1835
MalI	GATC	8 cut(s)	278, 354, 545, 1165, 1514, 1541, 1666, 1714
MbiI	CCGCTC	2 cut(s)	1408, 1876
MboI	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
MflI	RGATCY	2 cut(s)	1163, 1664
MhlI	GDGCHC	2 cut(s)	1050, 1734
MlsI	TGGCCA	1 cut(s)	1350
MluCI	AATT	3 cut(s)	144, 465, 1307
MluNI	TGGCCA	1 cut(s)	1350
MlyI	GAGTC	2 cut(s)	200, 379
MmeI	TCCRAC	1 cut(s)	1136
Mox20I	TGGCCA	1 cut(s)	1350
Mph1103I	ATGCAT	1 cut(s)	968
MroXI	GAANNNNTTC	1 cut(s)	336
MscI	TGGCCA	1 cut(s)	1350
MseI	TTAA	5 cut(s)	1323, 1359, 1598, 1889, 1897
MslI	CAYNNNNRTG	2 cut(s)	365, 1302
Msp20I	TGGCCA	1 cut(s)	1350
MspA1I	CMGCKG	1 cut(s)	821
MspI	CCGG	1 cut(s)	605
MspR9I	CCNGG	2 cut(s)	347, 459
Mva1269I	GAATGC	1 cut(s)	1653
MvaI	CCWGG	2 cut(s)	347, 459
MwoI	GCNNNNNNNGC	7 cut(s)	452, 461, 586, 608, 818, 1657, 1729
NcoI	CCATGG	2 cut(s)	1351, 1585
NdeI	CATATG	3 cut(s)	385, 481, 1213
NdeII	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
NlaIII	CATG	9 cut(s)	364, 427, 550, 1072, 1185, 1342, 1355, 1589, 1607
NlaIV	GGNNCC	3 cut(s)	165, 1412, 1679
NmuCI	GTSAC	2 cut(s)	1429, 1835
NsiI	ATGCAT	1 cut(s)	968
NspI	RCATGY	1 cut(s)	1185
NspV	TTCGAA	1 cut(s)	156
PaeR7I	CTCGAG	1 cut(s)	1142
PagI	TCATGA	1 cut(s)	360
PceI	AGGCCT	1 cut(s)	927
PciSI	GCTCTTC	1 cut(s)	975
PctI	GAATGC	1 cut(s)	1653
PdmI	GAANNNNTTC	1 cut(s)	336
PfeI	GAWTC	8 cut(s)	17, 52, 701, 736, 1108, 1225, 1699, 1770
PkrI	GCNGC	6 cut(s)	121, 247, 1180, 1368, 1375, 1378
Ple19I	CGATCG	1 cut(s)	1715
PleI	GAGTC	2 cut(s)	199, 378
PpsI	GAGTC	2 cut(s)	199, 378
Ppu21I	YACGTR	1 cut(s)	898
PpuMI	RGGWCCY	1 cut(s)	524
Psp5II	RGGWCCY	1 cut(s)	524
Psp6I	CCWGG	2 cut(s)	345, 457
PspGI	CCWGG	2 cut(s)	345, 457
PspN4I	GGNNCC	3 cut(s)	165, 1412, 1679
PspPI	GGNCC	3 cut(s)	524, 789, 1582
PspPPI	RGGWCCY	1 cut(s)	524
PstI	CTGCAG	2 cut(s)	511, 1378
PstNI	CAGNNNCTG	2 cut(s)	346, 590
PsuI	RGATCY	2 cut(s)	1163, 1664
PvuI	CGATCG	1 cut(s)	1715
RsaI	GTAC	6 cut(s)	900, 1067, 1127, 1194, 1412, 1593
RsaNI	GTAC	6 cut(s)	899, 1066, 1126, 1193, 1411, 1592
RseI	CAYNNNNRTG	2 cut(s)	365, 1302
SapI	GCTCTTC	1 cut(s)	975
SaqAI	TTAA	5 cut(s)	1323, 1359, 1598, 1889, 1897
SatI	GCNGC	6 cut(s)	120, 246, 1179, 1367, 1374, 1377
Sau3AI	GATC	8 cut(s)	276, 352, 543, 1163, 1512, 1539, 1664, 1712
Sau96I	GGNCC	3 cut(s)	524, 789, 1582
SchI	GAGTC	2 cut(s)	200, 379
ScrFI	CCNGG	2 cut(s)	347, 459
SduI	GDGCHC	2 cut(s)	1050, 1734
SfaNI	GCATC	4 cut(s)	632, 899, 1278, 1585
SfcI	CTRYAG	3 cut(s)	507, 762, 1374
Sfr274I	CTCGAG	1 cut(s)	1142
SfuI	TTCGAA	1 cut(s)	156
SinI	GGWCC	3 cut(s)	524, 789, 1582
SlaI	CTCGAG	1 cut(s)	1142
SmiMI	CAYNNNNRTG	2 cut(s)	365, 1302
SmlI	CTYRAG	5 cut(s)	866, 952, 1142, 1403, 1694
SmoI	CTYRAG	5 cut(s)	866, 952, 1142, 1403, 1694
SnaBI	TACGTA	1 cut(s)	898
SpeI	ACTAGT	1 cut(s)	1454
Sse9I	AATT	3 cut(s)	144, 465, 1307
SseBI	AGGCCT	1 cut(s)	927
SsiI	CCGC	6 cut(s)	250, 654, 821, 1179, 1408, 1876
SspMI	CTAG	4 cut(s)	92, 776, 929, 1455
StuI	AGGCCT	1 cut(s)	927
StyD4I	CCNGG	2 cut(s)	345, 457
StyI	CCWWGG	4 cut(s)	102, 1351, 1479, 1585
TaaI	ACNGT	6 cut(s)	830, 863, 991, 1130, 1415, 1850
TaiI	ACGT	2 cut(s)	900, 1156
TaqI	TCGA	4 cut(s)	156, 1143, 1542, 1715
TasI	AATT	3 cut(s)	144, 465, 1307
TatI	WGTACW	2 cut(s)	1065, 1192
TauI	GCSGC	1 cut(s)	1181
TfiI	GAWTC	8 cut(s)	17, 52, 701, 736, 1108, 1225, 1699, 1770
Tru1I	TTAA	5 cut(s)	1323, 1359, 1598, 1889, 1897
Tru9I	TTAA	5 cut(s)	1323, 1359, 1598, 1889, 1897
TscAI	CASTG	1 cut(s)	1450
TseFI	GTSAC	2 cut(s)	1429, 1835
TseI	GCWGC	5 cut(s)	119, 245, 1366, 1373, 1376
Tsp45I	GTSAC	2 cut(s)	1429, 1835
TspDTI	ATGAA	8 cut(s)	15, 17, 377, 468, 1032, 1462, 1479, 1859
TspGWI	ACGGA	4 cut(s)	802, 1412, 1521, 1883
TspRI	CASTG	1 cut(s)	1450
VpaK11BI	GGWCC	3 cut(s)	524, 789, 1582
XapI	RAATTY	1 cut(s)	144
XbaI	TCTAGA	2 cut(s)	91, 775
XceI	RCATGY	1 cut(s)	1185
XhoI	CTCGAG	1 cut(s)	1142
XmiI	GTMKAC	1 cut(s)	1201
XmnI	GAANNNNTTC	1 cut(s)	336
XspI	CTAG	4 cut(s)	92, 776, 929, 1455
Zsp2I	ATGCAT	1 cut(s)	968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.