Rh2CG548800

Regulator of chromosome condensation (RCC1) repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001941
Physical Location & Seq
Forward (+)
72894517 .. 72903716
9200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG548800.1

Sequence Viewer

Length: 2475 bp
ATGTCGCCAACTGATTCTACACGCGAGGAGAATGTTTACATGGCCAAGTTGGCTGAGCAAGCTGAGCGTTATGAGGAGATGGTTGAGTTTATGGAGAAGGTCGCAAAGACTGTTGATGTTGAGGAGCTAACTGTGGAGGAAAGAAACCTCCTCTCTGTTGCTTATAAGAATGTGATTGGAGCTAGGAGAGCTTCGTGGAGAATTATCTCTTCCATTGAGCAGAAGGAGGAGAGCAGGGGTAATGAAGATCATGTGTCAATCATCAAGGAGTACAGGAGCAAGATCGAGACCGAACTGAGCAAGATCTGTGATGGGATCTTGAACCTTCTTGAGTCCCACCTTATCCCCTCAGCATCATCTGCTGAGTCCAAGGTGTTCTACCTCAAGATGAAAGGTGACTACCATAGGTACCTTGCTGAATTTAAGACTGGAGGTGAAAGAAAAGAAGCAGCTGAGAGCACATTGTTGGCTTACAAATCTGCTCAGGACATTGCTCTGGCTGAGTTGGCTCCAACTCACCCAATAAGGCTGGGACTTGCTCTCAACTTCTCAGTGTTCTACTATGAAATCCTTAACTCACCAGACCGTGCTTGCAATCTGGCTAAACAGGCTTTCGATGAGGCTATTTCTGAACTTGACACACTGGGTGAAGAATCATACAAGGACAGTACTTTGATCATGCAACTCCTCCGAGACAATCTGACACTGTGGACCTCTGACATCACGGATGATGCTGGGGATGAAATCAAGGAAGCATCAAAGCGTGAATCAGGCGAAGCCCCCGCACATGCATCTTTGGAGAGGAGTTTCAGCGCTGCTGGGGCGGTGTTGGTGAGCCAAATTTATATTGGTACGAGTTCGGAGGTAGGTGGTGATTCCTGGGAGAAGTGGGATCCGGGTAGAAGATTTGGTGATCTCAATGGGTCTCCTCTTCCCGGCGATGCTGCTGAAGCGGTGGGGATTCGGTGGGTGCAAAACGGGGCTGTCATCCTGCTGGTTTGCTCGACGGTGTGGGTGTCGTACCCCACTAGTGGATCTCTTCTGGCTGGGGTTGGAGTCCGGGTTTGGGTCCTCAACGACGACGTTCTTCGATGCCAGGGTGGTGTGGCAGTCCTCGAGCTATCGTTTAGCGGATTGACGGATTTGGGGAGTGGCACCTGCGGCAGGGTCGTTTGGCCAGATGTTGTGGGGGCTGGGAATCATTCAGGTGGGCTCTGGGCTCAGATGGATTTGGGCTGGGGTAGGCACTGTGCTCCACAACTCTATTACCCCTGCTTCTACTATTCCATCACTCTTCCCATGGTATCCGATACCGCCATTATCACCTGGGGTTCCGGAGAAGATGGCCAATTGGGAATCGGGAGCAACGTGGAGAAGGACCTCGTGTGCGTTGTCACCGCCCTAGAGTCCCAGACTGTTCGCTCCGTTGTCGCTGGTAGCAGAAACTCTCTCGCCATTTGTGAAGATGGCAAGCTGTTTACATGGGGTTGGAATCAGAGAGGGACTTTGGGGCACCCTCCCGAGAGCAAAACTGAGAACGTTCCTAGTCAAGTTAAAGCTCTTGCCAATTTTAAAATCGTTCAGGCTGCTATTGGTGGATGGCATTGTTTGGCTGTTGATGATCAAGGCCATGCTTATGCCTGGGGTGGAAATGAGTATGGACAGTGTGGTGGAGAGCCTGAGCGTGACACTGGTAAACCTTTGAAAAGGGACATAGTGATTCCTCAGCGCTGTGCTCCCAAACTTGTAGTTCGCCAGGTAGCTGCTGGGGGCACTCACTCTGTGGTGCTTACACGTGAAGGGCATGTATGGACATGGGGTCAACCATGGCCTCCTGGAGACATAAAACAAATTTCAACACCTGTACGAGTACAAGGTCTTGATGCGGTGAAGCTTATTGCAGTAGGGGCATTTCATAATTTGGCTCTCCAAGAGGATGGCACTTTATGGGCATGGGGTAACAACGAATATGGACAGCTTGGAACAGGGGATACGCAGCCAAGATCACAACCCATTCCTGTCCGCGGACTGTCTGGTCTTACTTTGGTGGATATTGCTGCTGGAGGATGGCATTCTACCGCACTAACGGAGGATGGAGAGGTGTATGGATGGGGCCGAGGGGAACATGGTAGACTTGGTTTCGGCGATAATGATAAGAGCAGTAAAATGGTCCCGCAAAAGGTTCATCTTTTAGCTGGGGAGGATATCGTTCAGGTGTCTTGTGGAGGCACTCACTCTGCTGCATTAACACGTGATGGGCGCATTTTCTCGTATGGTCGAGGTGACCATGGACGTCTCGGATATGGAAGGAAGGTAACAACTGGTCAACCGATGGAAGTCCCCATCAAACTCCCTCCCAAAAATGTCAGTGACACTGAAGCCCAGGGACATTGGATTGCCAAACTTATTGCCTCTGGAGGTCGCCATACTCTGGCAATAGTCGAATGGAAATCAGATGAATCAACTGAATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RCC1

Protein Analysis

824

Amino Acids

89.45

Weight (kDa)

5.25

Isoelectric Point (pI)

33.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
14-3-3 PF00244 14 - 238 7.1e-105 14-3-3 protein
Alsin_RLD PF25384 437 - 545 7.2e-10 Alsin RCC1-like domain
WD40_RLD PF25390 440 - 812 3.6e-89 RCC1-like domain
RCC1 PF00415 441 - 486 6.3e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 473 - 501 1.1e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 489 - 539 5.8e-15 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 526 - 555 3.3e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 542 - 597 1.1e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 584 - 608 2.2e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 630 - 659 5.9e-10 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 646 - 695 3.5e-15 Regulator of chromosome condensation (RCC1) repeat
Alsin_RLD PF25384 648 - 720 2.9e-06 Alsin RCC1-like domain
RCC1_2 PF13540 683 - 710 7.7e-10 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 698 - 749 2.1e-16 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 736 - 764 1.5e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 752 - 813 1.1e-06 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 165
AarI CACCTGC 1 cut(s) 1166
AasI GACNNNNNNGTC 1 cut(s) 2034
AatII GACGTC 1 cut(s) 2296
Acc36I ACCTGC 1 cut(s) 1166
Acc65I GGTACC 1 cut(s) 408
AccB1I GGYRCC 3 cut(s) 408, 1154, 1512
AccB7I CCANNNNNTGG 1 cut(s) 2431
AccI GTMKAC 1 cut(s) 2131
AccII CGCG 2 cut(s) 24, 2025
AccIII TCCGGA 1 cut(s) 1334
AclI AACGTT 1 cut(s) 1539
AclWI GGATC 4 cut(s) 323, 887, 900, 1042
AcoI YGGCCR 3 cut(s) 42, 1175, 1345
AcsI RAATTY 3 cut(s) 419, 840, 1851
AcuI CTGAAG 2 cut(s) 969, 2397
AcvI CACGTG 2 cut(s) 1796, 2252
AcyI GRCGYC 1 cut(s) 2293
AdeI CACNNNGTG 2 cut(s) 647, 1783
AfaI GTAC 7 cut(s) 272, 410, 670, 853, 1022, 1866, 1872
AfeI AGCGCT 2 cut(s) 814, 1730
AfiI CCNNNNNNNGG 7 cut(s) 935, 1031, 1066, 1164, 2024, 2179, 2431
AflIII ACRYGT 2 cut(s) 1793, 2249
AgsI TTSAA 3 cut(s) 322, 1705, 1857
AhdI GACNNNNNGTC 1 cut(s) 1818
AhlI ACTAGT 1 cut(s) 1028
AjnI CCWGG 7 cut(s) 878, 1095, 1325, 1640, 1755, 1834, 2382
Alw21I GWGCWC 3 cut(s) 461, 1255, 1738
Alw26I GTCTC 5 cut(s) 281, 687, 930, 1833, 2300
AlwI GGATC 4 cut(s) 323, 887, 900, 1042
Ama87I CYCGRG 2 cut(s) 1115, 1520
Aor13HI TCCGGA 1 cut(s) 1334
Aor51HI AGCGCT 2 cut(s) 814, 1730
AoxI GGCC 6 cut(s) 42, 1175, 1345, 1627, 1829, 2113
ApeKI GCWGC 8 cut(s) 449, 815, 944, 1586, 1763, 1996, 2057, 2240
ApoI RAATTY 3 cut(s) 419, 840, 1851
Asp718I GGTACC 1 cut(s) 408
AspLEI GCGC 3 cut(s) 815, 1731, 2262
AspS9I GGNCC 5 cut(s) 711, 1069, 1378, 2113, 2170
AsuC2I CCSGG 3 cut(s) 897, 936, 1061
AvaI CYCGRG 2 cut(s) 1115, 1520
AvaII GGWCC 4 cut(s) 711, 1069, 1378, 2170
BaeGI GKGCMC 2 cut(s) 1515, 1775
BalI TGGCCA 3 cut(s) 44, 1177, 1347
BamHI GGATCC 1 cut(s) 892
BanI GGYRCC 3 cut(s) 408, 1154, 1512
BanII GRGCYC 2 cut(s) 1215, 1222
BauI CACGAG 1 cut(s) 1382
BbrPI CACGTG 2 cut(s) 1796, 2252
Bbv12I GWGCWC 3 cut(s) 461, 1255, 1738
BbvCI CCTCAGC 2 cut(s) 349, 1725
BbvI GCAGC 8 cut(s) 461, 802, 931, 1573, 1750, 2008, 2044, 2227
BciT130I CCWGG 7 cut(s) 880, 1097, 1327, 1642, 1757, 1836, 2384
BciVI GTATCC 2 cut(s) 1315, 1984
BclI TGATCA 2 cut(s) 675, 1621
BcnI CCSGG 3 cut(s) 897, 936, 1061
BcoDI GTCTC 5 cut(s) 281, 687, 930, 1833, 2300
BcuI ACTAGT 1 cut(s) 1028
BfaI CTAG 4 cut(s) 183, 1029, 1403, 1545
BfoI RGCGCY 2 cut(s) 816, 1732
BfuAI ACCTGC 1 cut(s) 1166
BfuI GTATCC 2 cut(s) 1315, 1984
BglI GCCNNNNNGGC 1 cut(s) 50
BglII AGATCT 1 cut(s) 303
BisI GCNGC 9 cut(s) 450, 816, 945, 1162, 1587, 1764, 1997, 2058, 2241
BlpI GCTNAGC 2 cut(s) 54, 63
BlsI GCNGC 9 cut(s) 451, 817, 946, 1163, 1588, 1765, 1998, 2059, 2242
BmcAI AGTACT 1 cut(s) 670
Bme18I GGWCC 4 cut(s) 711, 1069, 1378, 2170
BmeRI GACNNNNNGTC 1 cut(s) 1818
BmeT110I CYCGRG 2 cut(s) 1115, 1520
BmgT120I GGNCC 5 cut(s) 711, 1069, 1378, 2113, 2170
BmiI GGNNCC 9 cut(s) 410, 510, 894, 1070, 1156, 1333, 1514, 2114, 2172
BmrI ACTGGG 1 cut(s) 653
BmsI GCATC 7 cut(s) 362, 721, 764, 800, 931, 1082, 1873
BmuI ACTGGG 1 cut(s) 653
BpmI CTGGAG 4 cut(s) 450, 1857, 2082, 2436
Bpu10I CCTNAGC 4 cut(s) 349, 483, 1680, 1725
Bpu1102I GCTNAGC 2 cut(s) 54, 63
BpuEI CTTGAG 2 cut(s) 350, 368
BpuMI CCSGG 3 cut(s) 897, 936, 1061
BsaAI YACGTR 2 cut(s) 1796, 2252
BsaHI GRCGYC 1 cut(s) 2293
BsaI GGTCTC 2 cut(s) 281, 930
BsaWI WCCGGW 1 cut(s) 1334
BsaXI ACNNNNNCTCC 2 cut(s) 1047, 1077
Bsc4I CCNNNNNNNGG 7 cut(s) 935, 1031, 1066, 1164, 2024, 2179, 2431
Bse1I ACTGG 4 cut(s) 433, 648, 1696, 2326
Bse3DI GCAATG 1 cut(s) 489
BseAI TCCGGA 1 cut(s) 1334
BseBI CCWGG 7 cut(s) 880, 1097, 1327, 1642, 1757, 1836, 2384
BseGI GGATG 8 cut(s) 733, 745, 987, 1604, 1942, 2072, 2098, 2114
BseLI CCNNNNNNNGG 7 cut(s) 935, 1031, 1066, 1164, 2024, 2179, 2431
BseMI GCAATG 1 cut(s) 489
BseNI ACTGG 4 cut(s) 433, 648, 1696, 2326
BseRI GAGGAG 8 cut(s) 41, 89, 137, 140, 242, 677, 817, 918
BseSI GKGCMC 2 cut(s) 1515, 1775
BseXI GCAGC 8 cut(s) 461, 802, 931, 1573, 1750, 2008, 2044, 2227
BseYI CCCAGC 8 cut(s) 529, 734, 818, 1046, 1193, 1236, 1766, 2195
Bsh1236I CGCG 2 cut(s) 24, 2025
BshFI GGCC 6 cut(s) 44, 1177, 1347, 1629, 1831, 2115
BshNI GGYRCC 3 cut(s) 408, 1154, 1512
BsiHKAI GWGCWC 3 cut(s) 461, 1255, 1738
BsiHKCI CYCGRG 2 cut(s) 1115, 1520
BsiSI CCGG 4 cut(s) 896, 936, 1060, 1335
BslFI GGGAC 8 cut(s) 319, 546, 1393, 1516, 1724, 2156, 2324, 2400
BslI CCNNNNNNNGG 7 cut(s) 935, 1031, 1066, 1164, 2024, 2179, 2431
BsmAI GTCTC 5 cut(s) 281, 687, 930, 1833, 2300
BsmBI CGTCTC 1 cut(s) 2300
BsmFI GGGAC 8 cut(s) 319, 546, 1393, 1516, 1724, 2156, 2324, 2400
BsmI GAATGC 1 cut(s) 2071
BsnI GGCC 6 cut(s) 44, 1177, 1347, 1629, 1831, 2115
Bso31I GGTCTC 2 cut(s) 281, 930
BsoBI CYCGRG 2 cut(s) 1115, 1520
Bsp1286I GDGCHC 7 cut(s) 461, 1215, 1222, 1255, 1515, 1738, 1775
Bsp13I TCCGGA 1 cut(s) 1334
Bsp1720I GCTNAGC 2 cut(s) 54, 63
Bsp19I CCATGG 3 cut(s) 1299, 1826, 2287
BspANI GGCC 6 cut(s) 44, 1177, 1347, 1629, 1831, 2115
BspEI TCCGGA 1 cut(s) 1334
BspFNI CGCG 2 cut(s) 24, 2025
BspLI GGNNCC 9 cut(s) 410, 510, 894, 1070, 1156, 1333, 1514, 2114, 2172
BspMI ACCTGC 1 cut(s) 1166
BspPI GGATC 4 cut(s) 323, 887, 900, 1042
BspT107I GGYRCC 3 cut(s) 408, 1154, 1512
BspTNI GGTCTC 2 cut(s) 281, 930
BsrDI GCAATG 1 cut(s) 489
BsrI ACTGG 4 cut(s) 433, 648, 1696, 2326
BssNI GRCGYC 1 cut(s) 2293
BssSI CACGAG 1 cut(s) 1382
BssT1I CCWWGG 4 cut(s) 369, 1299, 1826, 2287
Bst2BI CACGAG 1 cut(s) 1382
Bst2UI CCWGG 7 cut(s) 880, 1097, 1327, 1642, 1757, 1836, 2384
Bst6I CTCTTC 4 cut(s) 214, 936, 1044, 1299
BstACI GRCGYC 1 cut(s) 2293
BstAPI GCANNNNNTGC 1 cut(s) 359
BstBAI YACGTR 2 cut(s) 1796, 2252
BstC8I GCNNGC 3 cut(s) 60, 592, 1472
BstDSI CCRYGG 4 cut(s) 1299, 1826, 2023, 2287
BstEII GGTNACC 1 cut(s) 2282
BstENI CCTNNNNNAGG 1 cut(s) 1162
BstF5I GGATG 8 cut(s) 733, 745, 987, 1604, 1942, 2072, 2098, 2114
BstFNI CGCG 2 cut(s) 24, 2025
BstH2I RGCGCY 2 cut(s) 816, 1732
BstHHI GCGC 3 cut(s) 815, 1731, 2262
BstMAI GTCTC 5 cut(s) 281, 687, 930, 1833, 2300
BstNI CCWGG 7 cut(s) 880, 1097, 1327, 1642, 1757, 1836, 2384
BstNSI RCATGY 2 cut(s) 791, 1808
BstPI GGTNACC 1 cut(s) 2282
BstSLI GKGCMC 2 cut(s) 1515, 1775
BstUI CGCG 2 cut(s) 24, 2025
BstV1I GCAGC 8 cut(s) 461, 802, 931, 1573, 1750, 2008, 2044, 2227
BstX2I RGATCY 4 cut(s) 303, 315, 892, 1034
BstXI CCANNNNNNTGG 1 cut(s) 1937
BstYI RGATCY 4 cut(s) 303, 315, 892, 1034
BsuI GTATCC 2 cut(s) 1315, 1984
BsuRI GGCC 6 cut(s) 44, 1177, 1347, 1629, 1831, 2115
BtgI CCRYGG 4 cut(s) 1299, 1826, 2023, 2287
BtgZI GCGATG 1 cut(s) 954
BtsCI GGATG 8 cut(s) 733, 745, 987, 1604, 1942, 2072, 2098, 2114
BtsIMutI CAGTG 8 cut(s) 558, 641, 704, 1246, 1670, 1689, 2373, 2374
BveI ACCTGC 1 cut(s) 1166
Cac8I GCNNGC 3 cut(s) 60, 592, 1472
CfoI GCGC 3 cut(s) 815, 1731, 2262
Cfr13I GGNCC 5 cut(s) 711, 1069, 1378, 2113, 2170
Cfr42I CCGCGG 1 cut(s) 2026
Csp6I GTAC 7 cut(s) 271, 409, 669, 852, 1021, 1865, 1871
CviQI GTAC 7 cut(s) 271, 409, 669, 852, 1021, 1865, 1871
DraI TTTAAA 1 cut(s) 1573
DraIII CACNNNGTG 2 cut(s) 647, 1783
DrdI GACNNNNNNGTC 1 cut(s) 2034
DriI GACNNNNNGTC 1 cut(s) 1818
DseDI GACNNNNNNGTC 1 cut(s) 2034
EaeI YGGCCR 3 cut(s) 42, 1175, 1345
Eam1104I CTCTTC 4 cut(s) 214, 936, 1044, 1299
Eam1105I GACNNNNNGTC 1 cut(s) 1818
EarI CTCTTC 4 cut(s) 214, 936, 1044, 1299
Eco130I CCWWGG 4 cut(s) 369, 1299, 1826, 2287
Eco24I GRGCYC 2 cut(s) 1215, 1222
Eco31I GGTCTC 2 cut(s) 281, 930
Eco32I GATATC 1 cut(s) 2206
Eco47I GGWCC 4 cut(s) 711, 1069, 1378, 2170
Eco47III AGCGCT 2 cut(s) 814, 1730
Eco57I CTGAAG 2 cut(s) 969, 2397
Eco72I CACGTG 2 cut(s) 1796, 2252
Eco88I CYCGRG 2 cut(s) 1115, 1520
Eco91I GGTNACC 1 cut(s) 2282
EcoNI CCTNNNNNAGG 1 cut(s) 1162
EcoO109I RGGNCCY 2 cut(s) 1069, 1378
EcoO65I GGTNACC 1 cut(s) 2282
EcoRII CCWGG 7 cut(s) 878, 1095, 1325, 1640, 1755, 1834, 2382
EcoRV GATATC 1 cut(s) 2206
EcoT14I CCWWGG 4 cut(s) 369, 1299, 1826, 2287
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 2 cut(s) 1215, 1222
ErhI CCWWGG 4 cut(s) 369, 1299, 1826, 2287
Esp3I CGTCTC 1 cut(s) 2300
FaqI GGGAC 8 cut(s) 319, 546, 1393, 1516, 1724, 2156, 2324, 2400
FauI CCCGC 2 cut(s) 790, 2181
FbaI TGATCA 2 cut(s) 675, 1621
FblI GTMKAC 1 cut(s) 2131
Fnu4HI GCNGC 9 cut(s) 450, 816, 945, 1162, 1587, 1764, 1997, 2058, 2241
FokI GGATG 8 cut(s) 740, 752, 974, 1611, 1949, 2079, 2105, 2121
FriOI GRGCYC 2 cut(s) 1215, 1222
Fsp4HI GCNGC 9 cut(s) 450, 816, 945, 1162, 1587, 1764, 1997, 2058, 2241
FspBI CTAG 4 cut(s) 183, 1029, 1403, 1545
GlaI GCGC 3 cut(s) 814, 1730, 2261
GluI GCNGC 9 cut(s) 450, 816, 945, 1162, 1587, 1764, 1997, 2058, 2241
GsaI CCCAGC 8 cut(s) 533, 738, 822, 1050, 1197, 1240, 1770, 2199
GsuI CTGGAG 4 cut(s) 450, 1857, 2082, 2436
HaeII RGCGCY 2 cut(s) 816, 1732
HaeIII GGCC 6 cut(s) 44, 1177, 1347, 1629, 1831, 2115
HapII CCGG 4 cut(s) 896, 936, 1060, 1335
HhaI GCGC 3 cut(s) 815, 1731, 2262
Hin1I GRCGYC 1 cut(s) 2293
Hin6I GCGC 3 cut(s) 813, 1729, 2260
HinP1I GCGC 3 cut(s) 813, 1729, 2260
HincII GTYRAC 2 cut(s) 1823, 2327
HindII GTYRAC 2 cut(s) 1823, 2327
HindIII AAGCTT 1 cut(s) 1892
HpaII CCGG 4 cut(s) 896, 936, 1060, 1335
Hpy166II GTNNAC 7 cut(s) 37, 711, 1479, 1697, 1823, 2132, 2327
Hpy8I GTNNAC 7 cut(s) 37, 711, 1479, 1697, 1823, 2132, 2327
Hpy99I CGWCG 3 cut(s) 1009, 1082, 1085
HpyAV CCTTC 7 cut(s) 91, 217, 335, 1369, 1793, 2301, 2305
HpyCH4IV ACGT 6 cut(s) 1083, 1368, 1539, 1795, 2251, 2293
HpyCH4V TGCA 6 cut(s) 594, 682, 791, 973, 1901, 2243
HpySE526I ACGT 6 cut(s) 1083, 1368, 1539, 1795, 2251, 2293
Hsp92I GRCGYC 1 cut(s) 2293
HspAI GCGC 3 cut(s) 813, 1729, 2260
Kpn2I TCCGGA 1 cut(s) 1334
KpnI GGTACC 1 cut(s) 412
Ksp22I TGATCA 2 cut(s) 675, 1621
KspI CCGCGG 1 cut(s) 2026
LmnI GCTCC 8 cut(s) 124, 179, 276, 514, 1258, 1362, 1427, 1741
Lsp1109I GCAGC 8 cut(s) 461, 802, 931, 1573, 1750, 2008, 2044, 2227
LweI GCATC 7 cut(s) 362, 721, 764, 800, 931, 1082, 1873
MaeI CTAG 4 cut(s) 183, 1029, 1403, 1545
MaeII ACGT 6 cut(s) 1083, 1368, 1539, 1795, 2251, 2293
MaeIII GTNAC 7 cut(s) 395, 1393, 1685, 1958, 2282, 2314, 2369
MfeI CAATTG 1 cut(s) 1349
MflI RGATCY 4 cut(s) 303, 315, 892, 1034
MhlI GDGCHC 7 cut(s) 461, 1215, 1222, 1255, 1515, 1738, 1775
MlsI TGGCCA 3 cut(s) 44, 1177, 1347
MluCI AATT 7 cut(s) 201, 419, 840, 1349, 1567, 1851, 1918
MluNI TGGCCA 3 cut(s) 44, 1177, 1347
MlyI GAGTC 4 cut(s) 341, 374, 1065, 1415
MmeI TCCRAC 3 cut(s) 536, 1033, 1469
Mox20I TGGCCA 3 cut(s) 44, 1177, 1347
Mph1103I ATGCAT 1 cut(s) 793
MroI TCCGGA 1 cut(s) 1334
MscI TGGCCA 3 cut(s) 44, 1177, 1347
MseI TTAA 5 cut(s) 423, 573, 1554, 1572, 2246
MslI CAYNNNNRTG 2 cut(s) 1206, 1635
Msp20I TGGCCA 3 cut(s) 44, 1177, 1347
MspA1I CMGCKG 2 cut(s) 452, 2025
MspI CCGG 4 cut(s) 896, 936, 1060, 1335
MunI CAATTG 1 cut(s) 1349
Mva1269I GAATGC 1 cut(s) 2071
MvaI CCWGG 7 cut(s) 880, 1097, 1327, 1642, 1757, 1836, 2384
MvnI CGCG 2 cut(s) 24, 2025
NciI CCSGG 3 cut(s) 897, 936, 1061
NcoI CCATGG 3 cut(s) 1299, 1826, 2287
NlaIV GGNNCC 9 cut(s) 410, 510, 894, 1070, 1156, 1333, 1514, 2114, 2172
NmeAIII GCCGAG 1 cut(s) 2141
NmuCI GTSAC 5 cut(s) 395, 1393, 1685, 2282, 2369
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 2 cut(s) 791, 1808
PaeR7I CTCGAG 1 cut(s) 1115
PaqCI CACCTGC 1 cut(s) 1166
PasI CCCWGGG 1 cut(s) 2383
PcsI WCGNNNNNNNCGW 1 cut(s) 1365
PctI GAATGC 1 cut(s) 2071
PflMI CCANNNNNTGG 1 cut(s) 2431
PfoI TCCNGGA 1 cut(s) 1834
PkrI GCNGC 9 cut(s) 451, 817, 946, 1163, 1588, 1765, 1998, 2059, 2242
PleI GAGTC 4 cut(s) 340, 373, 1064, 1414
PmaCI CACGTG 2 cut(s) 1796, 2252
PmlI CACGTG 2 cut(s) 1796, 2252
PpsI GAGTC 4 cut(s) 340, 373, 1064, 1414
Ppu21I YACGTR 2 cut(s) 1796, 2252
PpuMI RGGWCCY 2 cut(s) 1069, 1378
PsiI TTATAA 1 cut(s) 165
Psp1406I AACGTT 1 cut(s) 1539
Psp5II RGGWCCY 2 cut(s) 1069, 1378
Psp6I CCWGG 7 cut(s) 878, 1095, 1325, 1640, 1755, 1834, 2382
PspCI CACGTG 2 cut(s) 1796, 2252
PspEI GGTNACC 1 cut(s) 2282
PspFI CCCAGC 8 cut(s) 529, 734, 818, 1046, 1193, 1236, 1766, 2195
PspGI CCWGG 7 cut(s) 878, 1095, 1325, 1640, 1755, 1834, 2382
PspN4I GGNNCC 9 cut(s) 410, 510, 894, 1070, 1156, 1333, 1514, 2114, 2172
PspPI GGNCC 5 cut(s) 711, 1069, 1378, 2113, 2170
PspPPI RGGWCCY 2 cut(s) 1069, 1378
PspXI VCTCGAGB 1 cut(s) 1115
PsrI GAACNNNNNNTAC 2 cut(s) 1975, 2007
PsuI RGATCY 4 cut(s) 303, 315, 892, 1034
PvuII CAGCTG 1 cut(s) 452
RsaI GTAC 7 cut(s) 272, 410, 670, 853, 1022, 1866, 1872
RsaNI GTAC 7 cut(s) 271, 409, 669, 852, 1021, 1865, 1871
RseI CAYNNNNRTG 2 cut(s) 1206, 1635
SacII CCGCGG 1 cut(s) 2026
SaqAI TTAA 5 cut(s) 423, 573, 1554, 1572, 2246
SatI GCNGC 9 cut(s) 450, 816, 945, 1162, 1587, 1764, 1997, 2058, 2241
Sau96I GGNCC 5 cut(s) 711, 1069, 1378, 2113, 2170
ScaI AGTACT 1 cut(s) 670
SchI GAGTC 4 cut(s) 341, 374, 1065, 1415
SduI GDGCHC 7 cut(s) 461, 1215, 1222, 1255, 1515, 1738, 1775
SfaNI GCATC 7 cut(s) 362, 721, 764, 800, 931, 1082, 1873
Sfr274I CTCGAG 1 cut(s) 1115
Sfr303I CCGCGG 1 cut(s) 2026
SgrBI CCGCGG 1 cut(s) 2026
SinI GGWCC 4 cut(s) 711, 1069, 1378, 2170
SlaI CTCGAG 1 cut(s) 1115
SmiMI CAYNNNNRTG 2 cut(s) 1206, 1635
SmlI CTYRAG 3 cut(s) 329, 383, 1115
SmoI CTYRAG 3 cut(s) 329, 383, 1115
SpeI ACTAGT 1 cut(s) 1028
Sse9I AATT 7 cut(s) 201, 419, 840, 1349, 1567, 1851, 1918
SspMI CTAG 4 cut(s) 183, 1029, 1403, 1545
StyI CCWWGG 4 cut(s) 369, 1299, 1826, 2287
TaiI ACGT 6 cut(s) 1086, 1371, 1542, 1798, 2254, 2296
TaqI TCGA 7 cut(s) 285, 615, 1004, 1090, 1116, 2278, 2442
TaqII GACCGA 1 cut(s) 305
TasI AATT 7 cut(s) 201, 419, 840, 1349, 1567, 1851, 1918
TatI WGTACW 3 cut(s) 270, 668, 1870
TauI GCSGC 1 cut(s) 1164
Tru1I TTAA 5 cut(s) 423, 573, 1554, 1572, 2246
Tru9I TTAA 5 cut(s) 423, 573, 1554, 1572, 2246
TscAI CASTG 8 cut(s) 558, 648, 711, 1253, 1670, 1696, 2374, 2380
TseFI GTSAC 5 cut(s) 395, 1393, 1685, 2282, 2369
TseI GCWGC 8 cut(s) 449, 815, 944, 1586, 1763, 1996, 2057, 2240
Tsp45I GTSAC 5 cut(s) 395, 1393, 1685, 2282, 2369
TspDTI ATGAA 7 cut(s) 258, 404, 579, 756, 1904, 2174, 2472
TspGWI ACGGA 4 cut(s) 740, 1154, 1414, 2102
TspRI CASTG 8 cut(s) 558, 648, 711, 1253, 1670, 1696, 2374, 2380
Van91I CCANNNNNTGG 1 cut(s) 2431
VpaK11BI GGWCC 4 cut(s) 711, 1069, 1378, 2170
XagI CCTNNNNNAGG 1 cut(s) 1162
XapI RAATTY 3 cut(s) 419, 840, 1851
XceI RCATGY 2 cut(s) 791, 1808
XcmI CCANNNNNNNNNTGG 2 cut(s) 845, 1763
XhoI CTCGAG 1 cut(s) 1115
XmiI GTMKAC 1 cut(s) 2131
XspI CTAG 4 cut(s) 183, 1029, 1403, 1545
ZraI GACGTC 1 cut(s) 2294
ZrmI AGTACT 1 cut(s) 670
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.