Rh4CG198500

tuftelin-interacting protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
42287106 .. 42288242
1137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG198500.1

Sequence Viewer

Length: 831 bp
ATGGATTTGAGATCTGAAATCGAGAGGCTCTGCAGATCTGAATCTGGTCTGAGATCGATGGATTTGAGATCTGAAATCGATCGCCTTTCTCGCAAGCGCAAGGAGGACAATCTCCGACGCGTCGTTGAGACCCCGGAAGGAAATCTCCGCATCTTCGCTCTCGCTTTCTCCTCCTCCGACGAAGGAGACAACGGCGGCTCTAGAAAACGCATGAGGCGAGACCGCGGCTGCAACGCCGTCGTTTCATCCACCAAGCTCGCCGCGGAGCCCACCAGGCCCGTCAGATCCGCCGTGAAACCCTATGACGACGGTGGGGATCTGAATATTGGGGAGTTCGAGAAACACACGAGGGGCATCGGCATGAAATTGCAGATGAAGATGGGCTATAACGGACGTGGACTCGGCAAAAACGAGGAAGGTATTGAAGCCGAATTGAGGTCCAAAAATGAAGGTCTTGGTTTTGATTACAAGGAGGGGACTAAGCTGCGGCGGCGGCGGCCCACATCGTTTGTGAAAGCCAAGGTGGTGCACAAAACTGTCGCTGCTGGTGACAATGATCACAAGAAGAGCAAAACAGAAATAACCAAAAAACCAAGCAGGCTAAACACTAGTACAGTGGAAGAACACAAGCCCCACAAGCAGCCGCAGCGGCCTAATGAGGCAATTACCGGTGCCGCCGCCACCGGGATGGAGAAGAAGTCGACCACCAAAGGTGTCGATTTGCTGGGAAAGGTGATGGCTGATATGAGAAGACCTCTTGATGGAATCTTGGCCGACTTTGAGAATCTGAGTTTGATAGACAACAGCTCCAGGTGCATCTTAGCTATGTAA

Protein Analysis

276

Amino Acids

30.8

Weight (kDa)

9.8

Isoelectric Point (pI)

63.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-patch PF01585 116 - 153 5.7e-07 G-patch domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 671
AccI GTMKAC 1 cut(s) 701
AccII CGCG 3 cut(s) 120, 225, 263
AclWI GGATC 2 cut(s) 279, 324
AcoI YGGCCR 1 cut(s) 771
AfaI GTAC 1 cut(s) 613
AfiI CCNNNNNNNGG 3 cut(s) 435, 684, 761
AflIII ACRYGT 1 cut(s) 118
AgeI ACCGGT 1 cut(s) 668
AgsI TTSAA 1 cut(s) 425
AhlI ACTAGT 1 cut(s) 608
AjiI CACGTC 1 cut(s) 395
AjnI CCWGG 2 cut(s) 272, 809
AluBI AGCT 4 cut(s) 256, 484, 807, 824
AluI AGCT 4 cut(s) 256, 484, 807, 824
Alw21I GWGCWC 1 cut(s) 531
Alw26I GTCTC 3 cut(s) 122, 180, 213
Alw44I GTGCAC 1 cut(s) 527
AlwI GGATC 2 cut(s) 279, 324
AoxI GGCC 4 cut(s) 275, 497, 650, 771
ApaLI GTGCAC 1 cut(s) 527
ApeKI GCWGC 5 cut(s) 228, 484, 542, 640, 646
AsiGI ACCGGT 1 cut(s) 668
AspLEI GCGC 1 cut(s) 99
AspS9I GGNCC 3 cut(s) 276, 438, 498
AsuC2I CCSGG 2 cut(s) 134, 685
AsuHPI GGTGA 2 cut(s) 560, 745
AvaII GGWCC 1 cut(s) 438
BaeGI GKGCMC 1 cut(s) 531
BanI GGYRCC 1 cut(s) 671
BanII GRGCYC 1 cut(s) 270
BauI CACGAG 1 cut(s) 346
BbsI GAAGAC 1 cut(s) 757
Bbv12I GWGCWC 1 cut(s) 531
BbvI GCAGC 5 cut(s) 215, 471, 529, 652, 658
BccI CCATC 5 cut(s) 52, 373, 682, 730, 755
BceAI ACGGC 3 cut(s) 208, 221, 275
BcgI CGANNNNNNTGC 2 cut(s) 220, 254
BciT130I CCWGG 2 cut(s) 274, 811
BclI TGATCA 1 cut(s) 556
BcnI CCSGG 2 cut(s) 134, 685
BcoDI GTCTC 3 cut(s) 122, 180, 213
BcuI ACTAGT 1 cut(s) 608
BfaI CTAG 2 cut(s) 201, 609
BfmI CTRYAG 1 cut(s) 31
BglI GCCNNNNNGGC 2 cut(s) 274, 649
BglII AGATCT 3 cut(s) 11, 35, 68
Bme1390I CCNGG 4 cut(s) 134, 274, 685, 811
Bme18I GGWCC 1 cut(s) 438
BmgBI CACGTC 1 cut(s) 395
BmgT120I GGNCC 3 cut(s) 276, 438, 498
BmiI GGNNCC 2 cut(s) 267, 673
BmrFI CCNGG 4 cut(s) 134, 274, 685, 811
BmsI GCATC 3 cut(s) 159, 363, 825
BpiI GAAGAC 1 cut(s) 757
BplI GAGNNNNNCTC 2 cut(s) 739, 771
BpmI CTGGAG 1 cut(s) 793
BpuMI CCSGG 2 cut(s) 134, 685
Bsa29I ATCGAT 2 cut(s) 56, 78
BsaBI GATNNNNATC 1 cut(s) 40
BsaI GGTCTC 2 cut(s) 122, 213
BsaJI CCNNGG 4 cut(s) 132, 223, 261, 519
BsaWI WCCGGW 1 cut(s) 668
BsaXI ACNNNNNCTCC 4 cut(s) 683, 713, 791, 821
Bsc4I CCNNNNNNNGG 3 cut(s) 435, 684, 761
Bse118I RCCGGY 1 cut(s) 668
Bse8I GATNNNNATC 1 cut(s) 40
BseBI CCWGG 2 cut(s) 274, 811
BseCI ATCGAT 2 cut(s) 56, 78
BseDI CCNNGG 4 cut(s) 132, 223, 261, 519
BseGI GGATG 2 cut(s) 245, 693
BseJI GATNNNNATC 1 cut(s) 40
BseLI CCNNNNNNNGG 3 cut(s) 435, 684, 761
BseMII CTCAG 2 cut(s) 41, 779
BseRI GAGGAG 2 cut(s) 160, 163
BseSI GKGCMC 1 cut(s) 531
BseXI GCAGC 5 cut(s) 215, 471, 529, 652, 658
BseYI CCCAGC 1 cut(s) 724
Bsh1236I CGCG 3 cut(s) 120, 225, 263
Bsh1285I CGRYCG 1 cut(s) 82
BshFI GGCC 4 cut(s) 277, 499, 652, 773
BshNI GGYRCC 1 cut(s) 671
BshTI ACCGGT 1 cut(s) 668
BshVI ATCGAT 2 cut(s) 56, 78
BsiEI CGRYCG 1 cut(s) 82
BsiHKAI GWGCWC 1 cut(s) 531
BsiSI CCGG 3 cut(s) 134, 669, 684
BslFI GGGAC 1 cut(s) 490
BslI CCNNNNNNNGG 3 cut(s) 435, 684, 761
BsmAI GTCTC 3 cut(s) 122, 180, 213
BsmFI GGGAC 1 cut(s) 490
BsnI GGCC 4 cut(s) 277, 499, 652, 773
Bso31I GGTCTC 2 cut(s) 122, 213
Bsp1286I GDGCHC 2 cut(s) 270, 531
Bsp143I GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
BspANI GGCC 4 cut(s) 277, 499, 652, 773
BspCNI CTCAG 2 cut(s) 42, 780
BspDI ATCGAT 2 cut(s) 56, 78
BspFNI CGCG 3 cut(s) 120, 225, 263
BspLI GGNNCC 2 cut(s) 267, 673
BspMAI CTGCAG 1 cut(s) 35
BspPI GGATC 2 cut(s) 279, 324
BspQI GCTCTTC 1 cut(s) 560
BspT107I GGYRCC 1 cut(s) 671
BspTNI GGTCTC 2 cut(s) 122, 213
BsrFI RCCGGY 1 cut(s) 668
BssAI RCCGGY 1 cut(s) 668
BssECI CCNNGG 4 cut(s) 132, 223, 261, 519
BssMI GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
BssSI CACGAG 1 cut(s) 346
BssT1I CCWWGG 1 cut(s) 519
Bst2BI CACGAG 1 cut(s) 346
Bst2UI CCWGG 2 cut(s) 274, 811
Bst4CI ACNGT 3 cut(s) 311, 538, 616
Bst6I CTCTTC 1 cut(s) 560
BstC8I GCNNGC 3 cut(s) 95, 258, 599
BstDEI CTNAG 4 cut(s) 50, 480, 788, 820
BstDSI CCRYGG 2 cut(s) 223, 261
BstF5I GGATG 2 cut(s) 245, 693
BstFNI CGCG 3 cut(s) 120, 225, 263
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 8 cut(s) 14, 38, 56, 71, 82, 287, 319, 559
BstMAI GTCTC 3 cut(s) 122, 180, 213
BstMBI GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
BstMCI CGRYCG 1 cut(s) 82
BstMWI GCNNNNNNNGC 9 cut(s) 90, 274, 490, 493, 496, 637, 646, 649, 813
BstNI CCWGG 2 cut(s) 274, 811
BstSCI CCNGG 4 cut(s) 132, 272, 683, 809
BstSFI CTRYAG 1 cut(s) 31
BstSLI GKGCMC 1 cut(s) 531
BstUI CGCG 3 cut(s) 120, 225, 263
BstV1I GCAGC 5 cut(s) 215, 471, 529, 652, 658
BstV2I GAAGAC 1 cut(s) 757
BstX2I RGATCY 5 cut(s) 11, 35, 68, 284, 316
BstXI CCANNNNNNTGG 1 cut(s) 688
BstYI RGATCY 5 cut(s) 11, 35, 68, 284, 316
Bsu15I ATCGAT 2 cut(s) 56, 78
BsuRI GGCC 4 cut(s) 277, 499, 652, 773
BsuTUI ATCGAT 2 cut(s) 56, 78
BtgI CCRYGG 2 cut(s) 223, 261
BtrI CACGTC 1 cut(s) 395
BtsCI GGATG 2 cut(s) 245, 693
BtsIMutI CAGTG 1 cut(s) 621
Cac8I GCNNGC 3 cut(s) 95, 258, 599
CfoI GCGC 1 cut(s) 99
Cfr10I RCCGGY 1 cut(s) 668
Cfr13I GGNCC 3 cut(s) 276, 438, 498
Cfr42I CCGCGG 2 cut(s) 226, 264
ClaI ATCGAT 2 cut(s) 56, 78
CseI GACGC 2 cut(s) 109, 126
Csp6I GTAC 1 cut(s) 612
CspAI ACCGGT 1 cut(s) 668
CspCI CAANNNNNGTGG 2 cut(s) 490, 525
CviAII CATG 2 cut(s) 211, 361
CviQI GTAC 1 cut(s) 612
DdeI CTNAG 4 cut(s) 50, 480, 788, 820
DpnI GATC 8 cut(s) 13, 37, 55, 70, 81, 286, 318, 558
DpnII GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
EaeI YGGCCR 1 cut(s) 771
Eam1104I CTCTTC 1 cut(s) 560
EarI CTCTTC 1 cut(s) 560
EciI GGCGGA 1 cut(s) 277
Eco130I CCWWGG 1 cut(s) 519
Eco24I GRGCYC 1 cut(s) 270
Eco31I GGTCTC 2 cut(s) 122, 213
Eco47I GGWCC 1 cut(s) 438
EcoRII CCWGG 2 cut(s) 272, 809
EcoT14I CCWWGG 1 cut(s) 519
EcoT38I GRGCYC 1 cut(s) 270
ErhI CCWWGG 1 cut(s) 519
FaeI CATG 2 cut(s) 214, 364
FaiI YATR 6 cut(s) 212, 303, 362, 387, 746, 827
FaqI GGGAC 1 cut(s) 490
FatI CATG 2 cut(s) 210, 360
FbaI TGATCA 1 cut(s) 556
FblI GTMKAC 1 cut(s) 701
FokI GGATG 2 cut(s) 232, 700
FriOI GRGCYC 1 cut(s) 270
FspBI CTAG 2 cut(s) 201, 609
GlaI GCGC 1 cut(s) 98
GsaI CCCAGC 1 cut(s) 728
GsuI CTGGAG 1 cut(s) 793
HaeIII GGCC 4 cut(s) 277, 499, 652, 773
HapII CCGG 3 cut(s) 134, 669, 684
HgaI GACGC 2 cut(s) 109, 126
HhaI GCGC 1 cut(s) 99
Hin1II CATG 2 cut(s) 214, 364
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HincII GTYRAC 1 cut(s) 702
HindII GTYRAC 1 cut(s) 702
HinfI GANTC 4 cut(s) 41, 399, 765, 784
HpaII CCGG 3 cut(s) 134, 669, 684
HphI GGTGA 2 cut(s) 560, 745
Hpy166II GTNNAC 3 cut(s) 398, 529, 702
Hpy188I TCNGA 9 cut(s) 16, 40, 51, 73, 116, 178, 284, 321, 789
Hpy188III TCNNGA 4 cut(s) 22, 201, 337, 758
Hpy8I GTNNAC 3 cut(s) 398, 529, 702
Hpy99I CGWCG 5 cut(s) 120, 125, 182, 242, 311
HpyAV CCTTC 4 cut(s) 131, 176, 410, 443
HpyCH4III ACNGT 3 cut(s) 311, 538, 616
HpyCH4IV ACGT 1 cut(s) 394
HpyCH4V TGCA 5 cut(s) 33, 231, 370, 529, 816
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 274, 490, 493, 496, 637, 646, 649, 813
HpyF3I CTNAG 4 cut(s) 50, 480, 788, 820
HpySE526I ACGT 1 cut(s) 394
Hsp92II CATG 2 cut(s) 214, 364
HspAI GCGC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 556
KspI CCGCGG 2 cut(s) 226, 264
Kzo9I GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
LguI GCTCTTC 1 cut(s) 560
LmnI GCTCC 2 cut(s) 265, 812
Lsp1109I GCAGC 5 cut(s) 215, 471, 529, 652, 658
LweI GCATC 3 cut(s) 159, 363, 825
MaeI CTAG 2 cut(s) 201, 609
MaeII ACGT 1 cut(s) 394
MaeIII GTNAC 1 cut(s) 548
MalI GATC 8 cut(s) 13, 37, 55, 70, 81, 286, 318, 558
MboI GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
MboII GAAGA 6 cut(s) 145, 388, 577, 632, 706, 762
MflI RGATCY 5 cut(s) 11, 35, 68, 284, 316
MhlI GDGCHC 2 cut(s) 270, 531
MluCI AATT 3 cut(s) 365, 431, 663
MluI ACGCGT 1 cut(s) 118
MlyI GAGTC 1 cut(s) 393
MmeI TCCRAC 2 cut(s) 139, 201
MslI CAYNNNNRTG 2 cut(s) 359, 686
MspA1I CMGCKG 3 cut(s) 225, 263, 649
MspI CCGG 3 cut(s) 134, 669, 684
MspR9I CCNGG 4 cut(s) 134, 274, 685, 811
MvaI CCWGG 2 cut(s) 274, 811
MvnI CGCG 3 cut(s) 120, 225, 263
MwoI GCNNNNNNNGC 9 cut(s) 90, 274, 490, 493, 496, 637, 646, 649, 813
NciI CCSGG 2 cut(s) 134, 685
NdeII GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
NlaIII CATG 2 cut(s) 214, 364
NlaIV GGNNCC 2 cut(s) 267, 673
NmeAIII GCCGAG 1 cut(s) 381
NmuCI GTSAC 1 cut(s) 548
PciSI GCTCTTC 1 cut(s) 560
PcsI WCGNNNNNNNCGW 2 cut(s) 214, 408
PfeI GAWTC 3 cut(s) 41, 765, 784
PinAI ACCGGT 1 cut(s) 668
Ple19I CGATCG 1 cut(s) 82
PleI GAGTC 1 cut(s) 393
PpsI GAGTC 1 cut(s) 393
Psp6I CCWGG 2 cut(s) 272, 809
PspFI CCCAGC 1 cut(s) 724
PspGI CCWGG 2 cut(s) 272, 809
PspN4I GGNNCC 2 cut(s) 267, 673
PspPI GGNCC 3 cut(s) 276, 438, 498
PstI CTGCAG 1 cut(s) 35
PsuI RGATCY 5 cut(s) 11, 35, 68, 284, 316
PvuI CGATCG 1 cut(s) 82
RsaI GTAC 1 cut(s) 613
RsaNI GTAC 1 cut(s) 612
RseI CAYNNNNRTG 2 cut(s) 359, 686
SacII CCGCGG 2 cut(s) 226, 264
SalI GTCGAC 1 cut(s) 700
SapI GCTCTTC 1 cut(s) 560
Sau3AI GATC 8 cut(s) 11, 35, 53, 68, 79, 284, 316, 556
Sau96I GGNCC 3 cut(s) 276, 438, 498
SchI GAGTC 1 cut(s) 393
ScrFI CCNGG 4 cut(s) 134, 274, 685, 811
SduI GDGCHC 2 cut(s) 270, 531
SfaNI GCATC 3 cut(s) 159, 363, 825
SfcI CTRYAG 1 cut(s) 31
Sfr303I CCGCGG 2 cut(s) 226, 264
SgrBI CCGCGG 2 cut(s) 226, 264
SinI GGWCC 1 cut(s) 438
SmiMI CAYNNNNRTG 2 cut(s) 359, 686
SpeI ACTAGT 1 cut(s) 608
Sse9I AATT 3 cut(s) 365, 431, 663
SspI AATATT 1 cut(s) 325
SspMI CTAG 2 cut(s) 201, 609
StyD4I CCNGG 4 cut(s) 132, 272, 683, 809
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 3 cut(s) 311, 538, 616
TaiI ACGT 1 cut(s) 397
TaqI TCGA 6 cut(s) 21, 56, 78, 336, 701, 717
TasI AATT 3 cut(s) 365, 431, 663
TatI WGTACW 1 cut(s) 611
TfiI GAWTC 3 cut(s) 41, 765, 784
TscAI CASTG 1 cut(s) 621
TseFI GTSAC 1 cut(s) 548
TseI GCWGC 5 cut(s) 228, 484, 542, 640, 646
Tsp45I GTSAC 1 cut(s) 548
TspDTI ATGAA 4 cut(s) 234, 377, 389, 462
TspGWI ACGGA 1 cut(s) 405
TspRI CASTG 1 cut(s) 621
VneI GTGCAC 1 cut(s) 527
VpaK11BI GGWCC 1 cut(s) 438
XbaI TCTAGA 1 cut(s) 200
XmiI GTMKAC 1 cut(s) 701
XspI CTAG 2 cut(s) 201, 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.