Rh4CG198700

Serine carboxypeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0001296
Physical Location & Seq
Forward (+)
42295643 .. 42305320
9678 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG198700.1

Sequence Viewer

Length: 1383 bp
ATGGATTTGAGGTCTGAAATCGATCTCTGTTCTCGCAAGCGCAAGGAGAGCAATCTCCGACGCGTCGTTGAGACCTCGGAAGGAAATCTCCGCATCTTCGCTCTCGCTTCCTCCTCCTCCGACCACCACGACGACGACAACGGAGACAACGGCGGCTCCAGAAAACGCATGAGGCGAGACCGCGGCTGCAACGCCGTCGTTTCATCCACCAAGCTCGCCGTGGAGCCCACCAGACCCGTCAGGTCCGCCGTGAAACCCTATGAGGACGGTGGGGATCTGAATATTGGGGAGTTCGAGAAACACACAAAGGGCATCGGCATGAAATTGCTGATGAAGATGGGCTATAACGGTGGCGGACTGGGGAAGAACGAGAAAGGTATTGTGAGCCCAATTGAAGCCGAATTGAGGCCCAAAAATGAAGGTCTTGGTTTTGATTACAAGGAGGGGACTAAGCTGCGGCGGCGTCCCACATCGTTTGTGAAAGCCAAGGCGGTGCAGAAAAGTGTGGGTAATGGTGACAAAGATCACAAGAAGACCAAAACAGAAATAGCCAAAAAACCAAGCAGCCTAAACACTAGTACAGTGGAAGGACACAAGCCCAACGAGCAGCCTAATGACGCAATTACCAGTGCCGCCGGGATGGGGAAGAAGACGAGAACAAAAGGTGTCGATTTGCTGGAAAAGGTGATGGCTGATATGAGAAGACCTCTTGATGGAATCTTGGCCGACCTTGAGAATTTGAGTTTGAAAGATACAACCTCCAGATTGATTGAGCTTCAGAATAGCCTCACTGCATTGCTCACTTATGATCCTGAGATATATCCACAAGGGTCCAAGAGCCTTGAACCCAGTCAAGCTGAAGAAGATGAAGCAGCAGCCAAAGATGGAGATGGTGCCTCTGAGACTAACAAGTTCACTGTGGCACACTGGTCAAGTCTCTTTAGATGCCCTGGTTGTTCTGCTTTCAGTGGCCTTATTTATCAAAATGGTCCTTTGGATTTCAACTTTACTGAGTATGATGGAGGTATACCAAAAAGTTATTACTACCCATACTCATGGAGAAGAATTGGTATCTTCCCACTTTCGTTGAGCTTCTGTTTTATTGATCTTAGATTTGTTACAAAATTGATATTGGTAGCAAGTTTCCACACTGCAAGCATATTGTTTATAGATGCACCTGTTGCCACTGGTTTCTACTATGCAACTGATGCAAAAGAATATGCTACCTCTGATACAAAAACAGCATCACAGGTTTACGGCTTCTTCAAAATGGTAATGATGCCGGAGCATCACCACACCTCAATCTCAAGACAAGCAGTTACAAAAAAAGTTCCAACCTGGACGTCAAAAGAGAAAGGAGATAAGTATATAGGCACCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

460

Amino Acids

50.89

Weight (kDa)

9.02

Isoelectric Point (pI)

43.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-patch PF01585 102 - 143 1.6e-15 G-patch domain
G-patch_2 PF12656 105 - 146 9.3e-07 G-patch domain
Peptidase_S10 PF00450 384 - 424 9.1e-07 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1346
AccB1I GGYRCC 2 cut(s) 893, 1373
AccI GTMKAC 1 cut(s) 1027
AccII CGCG 2 cut(s) 63, 183
AclWI GGATC 2 cut(s) 282, 803
AcoI YGGCCR 1 cut(s) 723
AcsI RAATTY 1 cut(s) 736
AcuI CTGAAG 2 cut(s) 761, 879
AcyI GRCGYC 2 cut(s) 463, 1343
AfaI GTAC 1 cut(s) 580
AfiI CCNNNNNNNGG 3 cut(s) 405, 642, 713
AflIII ACRYGT 1 cut(s) 61
AgsI TTSAA 5 cut(s) 395, 748, 845, 1003, 1267
AhlI ACTAGT 1 cut(s) 575
AjnI CCWGG 2 cut(s) 949, 1337
AluBI AGCT 5 cut(s) 214, 454, 775, 857, 1092
AluI AGCT 5 cut(s) 214, 454, 775, 857, 1092
Alw26I GTCTC 5 cut(s) 65, 138, 171, 896, 941
AlwI GGATC 2 cut(s) 282, 803
AoxI GGCC 3 cut(s) 407, 723, 970
ApeKI GCWGC 6 cut(s) 186, 454, 564, 607, 872, 875
ApoI RAATTY 1 cut(s) 736
AspLEI GCGC 1 cut(s) 42
AspS9I GGNCC 4 cut(s) 243, 408, 831, 989
AsuC2I CCSGG 1 cut(s) 637
AsuHPI GGTGA 3 cut(s) 527, 697, 1283
AvaII GGWCC 3 cut(s) 243, 831, 989
BanI GGYRCC 2 cut(s) 893, 1373
BanII GRGCYC 2 cut(s) 228, 389
BbsI GAAGAC 3 cut(s) 539, 656, 709
BbvI GCAGC 6 cut(s) 173, 441, 576, 619, 884, 887
BccI CCATC 7 cut(s) 331, 634, 682, 707, 878, 884, 1013
BceAI ACGGC 5 cut(s) 166, 179, 203, 233, 1273
BcgI CGANNNNNNTGC 2 cut(s) 178, 212
BciT130I CCWGG 2 cut(s) 951, 1339
BcnI CCSGG 1 cut(s) 637
BcoDI GTCTC 5 cut(s) 65, 138, 171, 896, 941
BcuI ACTAGT 1 cut(s) 575
BfaI CTAG 1 cut(s) 576
Bme1390I CCNGG 3 cut(s) 637, 951, 1339
Bme18I GGWCC 3 cut(s) 243, 831, 989
BmgT120I GGNCC 4 cut(s) 243, 408, 831, 989
BmiI GGNNCC 5 cut(s) 157, 225, 832, 895, 1375
BmrFI CCNGG 3 cut(s) 637, 951, 1339
BmrI ACTGGG 2 cut(s) 368, 843
BmsI GCATC 8 cut(s) 102, 321, 935, 1162, 1198, 1253, 1269, 1297
BmuI ACTGGG 2 cut(s) 368, 843
BpiI GAAGAC 3 cut(s) 539, 656, 709
BplI GAGNNNNNCTC 2 cut(s) 691, 723
BpmI CTGGAG 2 cut(s) 142, 745
BpuEI CTTGAG 2 cut(s) 752, 1291
BpuMI CCSGG 1 cut(s) 637
Bsa29I ATCGAT 1 cut(s) 21
BsaHI GRCGYC 2 cut(s) 463, 1343
BsaI GGTCTC 2 cut(s) 65, 171
BsaJI CCNNGG 5 cut(s) 75, 181, 219, 486, 949
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 3 cut(s) 405, 642, 713
Bse1I ACTGG 5 cut(s) 363, 627, 849, 932, 1192
Bse3DI GCAATG 1 cut(s) 794
BseBI CCWGG 2 cut(s) 951, 1339
BseCI ATCGAT 1 cut(s) 21
BseDI CCNNGG 5 cut(s) 75, 181, 219, 486, 949
BseGI GGATG 2 cut(s) 203, 645
BseLI CCNNNNNNNGG 3 cut(s) 405, 642, 713
BseMI GCAATG 1 cut(s) 794
BseMII CTCAG 3 cut(s) 804, 891, 1002
BseNI ACTGG 5 cut(s) 363, 627, 849, 932, 1192
BseRI GAGGAG 2 cut(s) 103, 106
BseXI GCAGC 6 cut(s) 173, 441, 576, 619, 884, 887
BsgI GTGCAG 1 cut(s) 515
Bsh1236I CGCG 2 cut(s) 63, 183
BshFI GGCC 3 cut(s) 409, 725, 972
BshNI GGYRCC 2 cut(s) 893, 1373
BshVI ATCGAT 1 cut(s) 21
BsiSI CCGG 2 cut(s) 636, 1283
BslFI GGGAC 2 cut(s) 450, 460
BslI CCNNNNNNNGG 3 cut(s) 405, 642, 713
BsmAI GTCTC 5 cut(s) 65, 138, 171, 896, 941
BsmFI GGGAC 2 cut(s) 450, 460
BsnI GGCC 3 cut(s) 409, 725, 972
Bso31I GGTCTC 2 cut(s) 65, 171
Bsp1286I GDGCHC 2 cut(s) 228, 389
Bsp143I GATC 5 cut(s) 22, 274, 523, 808, 1105
BspANI GGCC 3 cut(s) 409, 725, 972
BspCNI CTCAG 3 cut(s) 805, 892, 1003
BspDI ATCGAT 1 cut(s) 21
BspFNI CGCG 2 cut(s) 63, 183
BspLI GGNNCC 5 cut(s) 157, 225, 832, 895, 1375
BspPI GGATC 2 cut(s) 282, 803
BspT107I GGYRCC 2 cut(s) 893, 1373
BspTNI GGTCTC 2 cut(s) 65, 171
BsrDI GCAATG 1 cut(s) 794
BsrI ACTGG 5 cut(s) 363, 627, 849, 932, 1192
BssECI CCNNGG 5 cut(s) 75, 181, 219, 486, 949
BssMI GATC 5 cut(s) 22, 274, 523, 808, 1105
BssNAI GTATAC 1 cut(s) 1028
BssNI GRCGYC 2 cut(s) 463, 1343
BssT1I CCWWGG 1 cut(s) 486
Bst1107I GTATAC 1 cut(s) 1028
Bst2UI CCWGG 2 cut(s) 951, 1339
Bst4CI ACNGT 4 cut(s) 269, 350, 583, 919
BstACI GRCGYC 2 cut(s) 463, 1343
BstAPI GCANNNNNTGC 2 cut(s) 1181, 1208
BstC8I GCNNGC 3 cut(s) 38, 216, 1156
BstDEI CTNAG 5 cut(s) 450, 813, 900, 1011, 1109
BstDSI CCRYGG 2 cut(s) 181, 219
BstF5I GGATG 2 cut(s) 203, 645
BstFNI CGCG 2 cut(s) 63, 183
BstHHI GCGC 1 cut(s) 42
BstKTI GATC 5 cut(s) 25, 277, 526, 811, 1108
BstMAI GTCTC 5 cut(s) 65, 138, 171, 896, 941
BstMBI GATC 5 cut(s) 22, 274, 523, 808, 1105
BstMWI GCNNNNNNNGC 5 cut(s) 48, 460, 604, 1181, 1208
BstNI CCWGG 2 cut(s) 951, 1339
BstSCI CCNGG 3 cut(s) 635, 949, 1337
BstUI CGCG 2 cut(s) 63, 183
BstV1I GCAGC 6 cut(s) 173, 441, 576, 619, 884, 887
BstV2I GAAGAC 3 cut(s) 539, 656, 709
BstX2I RGATCY 1 cut(s) 274
BstXI CCANNNNNNTGG 1 cut(s) 1056
BstYI RGATCY 1 cut(s) 274
BstZ17I GTATAC 1 cut(s) 1028
Bsu15I ATCGAT 1 cut(s) 21
BsuRI GGCC 3 cut(s) 409, 725, 972
BsuTUI ATCGAT 1 cut(s) 21
BtgI CCRYGG 2 cut(s) 181, 219
BtsCI GGATG 2 cut(s) 203, 645
BtsI GCAGTG 2 cut(s) 789, 1149
BtsIMutI CAGTG 8 cut(s) 588, 634, 789, 915, 925, 973, 1149, 1185
Cac8I GCNNGC 3 cut(s) 38, 216, 1156
CfoI GCGC 1 cut(s) 42
Cfr13I GGNCC 4 cut(s) 243, 408, 831, 989
Cfr42I CCGCGG 1 cut(s) 184
ClaI ATCGAT 1 cut(s) 21
CseI GACGC 4 cut(s) 52, 69, 452, 626
Csp6I GTAC 1 cut(s) 579
CspCI CAANNNNNGTGG 4 cut(s) 457, 492, 1068, 1103
CviAII CATG 4 cut(s) 169, 319, 1056, 1380
CviQI GTAC 1 cut(s) 579
DdeI CTNAG 5 cut(s) 450, 813, 900, 1011, 1109
DpnI GATC 5 cut(s) 24, 276, 525, 810, 1107
DpnII GATC 5 cut(s) 22, 274, 523, 808, 1105
EaeI YGGCCR 1 cut(s) 723
EciI GGCGGA 2 cut(s) 235, 369
Eco130I CCWWGG 1 cut(s) 486
Eco24I GRGCYC 2 cut(s) 228, 389
Eco31I GGTCTC 2 cut(s) 65, 171
Eco47I GGWCC 3 cut(s) 243, 831, 989
Eco57I CTGAAG 2 cut(s) 761, 879
EcoRII CCWGG 2 cut(s) 949, 1337
EcoT14I CCWWGG 1 cut(s) 486
EcoT38I GRGCYC 2 cut(s) 228, 389
ErhI CCWWGG 1 cut(s) 486
FaeI CATG 4 cut(s) 172, 322, 1059, 1383
FaqI GGGAC 2 cut(s) 450, 460
FatI CATG 4 cut(s) 168, 318, 1055, 1379
FblI GTMKAC 1 cut(s) 1027
FokI GGATG 2 cut(s) 190, 652
FriOI GRGCYC 2 cut(s) 228, 389
FspBI CTAG 1 cut(s) 576
GlaI GCGC 1 cut(s) 41
GsuI CTGGAG 2 cut(s) 142, 745
HaeIII GGCC 3 cut(s) 409, 725, 972
HapII CCGG 2 cut(s) 636, 1283
HgaI GACGC 4 cut(s) 52, 69, 452, 626
HhaI GCGC 1 cut(s) 42
Hin1I GRCGYC 2 cut(s) 463, 1343
Hin1II CATG 4 cut(s) 172, 322, 1059, 1383
Hin6I GCGC 1 cut(s) 40
HinP1I GCGC 1 cut(s) 40
HinfI GANTC 1 cut(s) 717
HpaII CCGG 2 cut(s) 636, 1283
HphI GGTGA 3 cut(s) 527, 697, 1283
Hpy166II GTNNAC 3 cut(s) 915, 1028, 1255
Hpy188I TCNGA 8 cut(s) 16, 59, 79, 121, 279, 780, 901, 1231
Hpy188III TCNNGA 6 cut(s) 159, 295, 710, 762, 812, 1308
Hpy8I GTNNAC 3 cut(s) 915, 1028, 1255
Hpy99I CGWCG 5 cut(s) 63, 68, 134, 137, 200
HpyAV CCTTC 3 cut(s) 74, 413, 581
HpyCH4III ACNGT 4 cut(s) 269, 350, 583, 919
HpyCH4IV ACGT 1 cut(s) 1343
HpyCH4V TGCA 7 cut(s) 189, 496, 794, 1154, 1175, 1202, 1211
HpyF10VI GCNNNNNNNGC 5 cut(s) 48, 460, 604, 1181, 1208
HpyF3I CTNAG 5 cut(s) 450, 813, 900, 1011, 1109
HpySE526I ACGT 1 cut(s) 1343
Hsp92I GRCGYC 2 cut(s) 463, 1343
Hsp92II CATG 4 cut(s) 172, 322, 1059, 1383
HspAI GCGC 1 cut(s) 40
KspI CCGCGG 1 cut(s) 184
Kzo9I GATC 5 cut(s) 22, 274, 523, 808, 1105
LmnI GCTCC 3 cut(s) 161, 223, 1285
Lsp1109I GCAGC 6 cut(s) 173, 441, 576, 619, 884, 887
LweI GCATC 8 cut(s) 102, 321, 935, 1162, 1198, 1253, 1269, 1297
MaeI CTAG 1 cut(s) 576
MaeII ACGT 1 cut(s) 1343
MaeIII GTNAC 3 cut(s) 515, 1117, 1318
MalI GATC 5 cut(s) 24, 276, 525, 810, 1107
MboI GATC 5 cut(s) 22, 274, 523, 808, 1105
MfeI CAATTG 1 cut(s) 390
MflI RGATCY 1 cut(s) 274
MhlI GDGCHC 2 cut(s) 228, 389
MluCI AATT 7 cut(s) 323, 390, 401, 621, 736, 1065, 1124
MluI ACGCGT 1 cut(s) 61
MmeI TCCRAC 3 cut(s) 82, 144, 1358
MslI CAYNNNNRTG 2 cut(s) 317, 1054
MspA1I CMGCKG 1 cut(s) 183
MspI CCGG 2 cut(s) 636, 1283
MspR9I CCNGG 3 cut(s) 637, 951, 1339
MunI CAATTG 1 cut(s) 390
MvaI CCWGG 2 cut(s) 951, 1339
MvnI CGCG 2 cut(s) 63, 183
MwoI GCNNNNNNNGC 5 cut(s) 48, 460, 604, 1181, 1208
NciI CCSGG 1 cut(s) 637
NdeII GATC 5 cut(s) 22, 274, 523, 808, 1105
NlaIII CATG 4 cut(s) 172, 322, 1059, 1383
NlaIV GGNNCC 5 cut(s) 157, 225, 832, 895, 1375
NmuCI GTSAC 1 cut(s) 515
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PfeI GAWTC 1 cut(s) 717
Psp6I CCWGG 2 cut(s) 949, 1337
PspGI CCWGG 2 cut(s) 949, 1337
PspN4I GGNNCC 5 cut(s) 157, 225, 832, 895, 1375
PspPI GGNCC 4 cut(s) 243, 408, 831, 989
PsuI RGATCY 1 cut(s) 274
RsaI GTAC 1 cut(s) 580
RsaNI GTAC 1 cut(s) 579
RseI CAYNNNNRTG 2 cut(s) 317, 1054
SacII CCGCGG 1 cut(s) 184
Sau3AI GATC 5 cut(s) 22, 274, 523, 808, 1105
Sau96I GGNCC 4 cut(s) 243, 408, 831, 989
ScrFI CCNGG 3 cut(s) 637, 951, 1339
SduI GDGCHC 2 cut(s) 228, 389
SfaNI GCATC 8 cut(s) 102, 321, 935, 1162, 1198, 1253, 1269, 1297
Sfr303I CCGCGG 1 cut(s) 184
SgrBI CCGCGG 1 cut(s) 184
SinI GGWCC 3 cut(s) 243, 831, 989
SmiMI CAYNNNNRTG 2 cut(s) 317, 1054
SmlI CTYRAG 2 cut(s) 731, 1306
SmoI CTYRAG 2 cut(s) 731, 1306
SpeI ACTAGT 1 cut(s) 575
Sse9I AATT 7 cut(s) 323, 390, 401, 621, 736, 1065, 1124
SspI AATATT 1 cut(s) 283
SspMI CTAG 1 cut(s) 576
StyD4I CCNGG 3 cut(s) 635, 949, 1337
StyI CCWWGG 1 cut(s) 486
TaaI ACNGT 4 cut(s) 269, 350, 583, 919
TaiI ACGT 1 cut(s) 1346
TaqI TCGA 3 cut(s) 21, 294, 669
TasI AATT 7 cut(s) 323, 390, 401, 621, 736, 1065, 1124
TatI WGTACW 1 cut(s) 578
TauI GCSGC 5 cut(s) 156, 186, 460, 463, 635
TfiI GAWTC 1 cut(s) 717
TscAI CASTG 8 cut(s) 588, 634, 796, 922, 932, 973, 1156, 1192
TseFI GTSAC 1 cut(s) 515
TseI GCWGC 6 cut(s) 186, 454, 564, 607, 872, 875
Tsp45I GTSAC 1 cut(s) 515
TspDTI ATGAA 5 cut(s) 192, 335, 347, 432, 882
TspGWI ACGGA 1 cut(s) 156
TspRI CASTG 8 cut(s) 588, 634, 796, 922, 932, 973, 1156, 1192
VpaK11BI GGWCC 3 cut(s) 243, 831, 989
XapI RAATTY 1 cut(s) 736
XcmI CCANNNNNNNNNTGG 1 cut(s) 217
XmiI GTMKAC 1 cut(s) 1027
XspI CTAG 1 cut(s) 576
ZraI GACGTC 1 cut(s) 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.