Rh4DG003600

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
591757 .. 595244
3488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG003600.1

Sequence Viewer

Length: 312 bp
ATGGACATGATTAACATGTTGCCTGTGGAGTGCATCTCCCTCATCATATCCTTTACATCTCCGCGCGATGCCTGCAGATCATCAGTAGTCTCTCCTGTCTTGAGAATAGCTGGAGATTCTGATTTTGTCTGGGAGAGGTTTCTGCCTCAAGATTATGAGCAAATCATTTCGCAATCCCCGTCATCGTCGTCTTTGAACTCCATGTCCAAGAAGAATCTCTACTTTCGTCTTTGCAGTCACCCCATCATCATAAGCAATGGTAACATGGTGGGTGATCACCTCGATGACGTGTCAACAGATGTAGATGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.44

Weight (kDa)

4.51

Isoelectric Point (pI)

65.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 64, 66
AciI CCGC 1 cut(s) 62
AflIII ACRYGT 2 cut(s) 15, 288
AgsI TTSAA 1 cut(s) 196
AjiI CACGTC 1 cut(s) 289
AloI GAACNNNNNNTCC 2 cut(s) 188, 220
AluBI AGCT 1 cut(s) 110
AluI AGCT 1 cut(s) 110
Alw26I GTCTC 1 cut(s) 94
AspLEI GCGC 1 cut(s) 66
AsuHPI GGTGA 3 cut(s) 230, 269, 284
BarI GAAGNNNNNNTAC 2 cut(s) 203, 235
BccI CCATC 2 cut(s) 251, 299
BclI TGATCA 1 cut(s) 274
BcoDI GTCTC 1 cut(s) 94
BfmI CTRYAG 1 cut(s) 73
BmgBI CACGTC 1 cut(s) 289
BmsI GCATC 2 cut(s) 42, 58
BplI GAGNNNNNCTC 2 cut(s) 20, 52
BpmI CTGGAG 1 cut(s) 132
BpuEI CTTGAG 2 cut(s) 121, 132
Bse3DI GCAATG 1 cut(s) 262
BseMI GCAATG 1 cut(s) 262
Bsh1236I CGCG 2 cut(s) 64, 66
BsmAI GTCTC 1 cut(s) 94
Bsp143I GATC 2 cut(s) 77, 274
BspACI CCGC 1 cut(s) 62
BspFNI CGCG 2 cut(s) 64, 66
BspMAI CTGCAG 1 cut(s) 77
BsrDI GCAATG 1 cut(s) 262
BssMI GATC 2 cut(s) 77, 274
BstC8I GCNNGC 1 cut(s) 73
BstFNI CGCG 2 cut(s) 64, 66
BstHHI GCGC 1 cut(s) 66
BstKTI GATC 2 cut(s) 80, 277
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 2 cut(s) 77, 274
BstMWI GCNNNNNNNGC 1 cut(s) 72
BstNSI RCATGY 1 cut(s) 19
BstSFI CTRYAG 1 cut(s) 73
BstUI CGCG 2 cut(s) 64, 66
BtgZI GCGATG 1 cut(s) 81
BtrI CACGTC 1 cut(s) 289
Cac8I GCNNGC 1 cut(s) 73
CfoI GCGC 1 cut(s) 66
CviAII CATG 4 cut(s) 7, 16, 202, 265
CviJI RGCY 2 cut(s) 110, 309
CviKI_1 RGCY 2 cut(s) 110, 309
DpnI GATC 2 cut(s) 79, 276
DpnII GATC 2 cut(s) 77, 274
FaeI CATG 4 cut(s) 10, 19, 205, 268
FaiI YATR 7 cut(s) 8, 17, 47, 156, 203, 251, 266
FatI CATG 4 cut(s) 6, 15, 201, 264
FbaI TGATCA 1 cut(s) 274
GlaI GCGC 1 cut(s) 65
GsuI CTGGAG 1 cut(s) 132
HhaI GCGC 1 cut(s) 66
Hin1II CATG 4 cut(s) 10, 19, 205, 268
Hin6I GCGC 1 cut(s) 64
HinP1I GCGC 1 cut(s) 64
HincII GTYRAC 1 cut(s) 294
HindII GTYRAC 1 cut(s) 294
HinfI GANTC 2 cut(s) 116, 214
HphI GGTGA 3 cut(s) 230, 269, 284
Hpy166II GTNNAC 1 cut(s) 294
Hpy188I TCNGA 1 cut(s) 121
Hpy188III TCNNGA 2 cut(s) 100, 149
Hpy8I GTNNAC 1 cut(s) 294
Hpy99I CGWCG 1 cut(s) 190
HpyCH4IV ACGT 1 cut(s) 288
HpyCH4V TGCA 3 cut(s) 33, 75, 234
HpyF10VI GCNNNNNNNGC 1 cut(s) 72
HpySE526I ACGT 1 cut(s) 288
Hsp92II CATG 4 cut(s) 10, 19, 205, 268
HspAI GCGC 1 cut(s) 64
Ksp22I TGATCA 1 cut(s) 274
Kzo9I GATC 2 cut(s) 77, 274
LpnPI CCDG 5 cut(s) 36, 85, 96, 108, 115
LweI GCATC 2 cut(s) 42, 58
MaeII ACGT 1 cut(s) 288
MaeIII GTNAC 2 cut(s) 236, 260
MalI GATC 2 cut(s) 79, 276
MboI GATC 2 cut(s) 77, 274
MboII GAAGA 1 cut(s) 223
MnlI CCTC 4 cut(s) 50, 129, 156, 290
MseI TTAA 1 cut(s) 12
MslI CAYNNNNRTG 1 cut(s) 282
MvnI CGCG 2 cut(s) 64, 66
MwoI GCNNNNNNNGC 1 cut(s) 72
NdeII GATC 2 cut(s) 77, 274
NlaIII CATG 4 cut(s) 10, 19, 205, 268
NmuCI GTSAC 1 cut(s) 236
NspI RCATGY 1 cut(s) 19
PciI ACATGT 1 cut(s) 15
PcsI WCGNNNNNNNCGW 1 cut(s) 176
PfeI GAWTC 2 cut(s) 116, 214
PscI ACATGT 1 cut(s) 15
PstI CTGCAG 1 cut(s) 77
RseI CAYNNNNRTG 1 cut(s) 282
SaqAI TTAA 1 cut(s) 12
Sau3AI GATC 2 cut(s) 77, 274
SetI ASST 4 cut(s) 112, 140, 282, 291
SfaNI GCATC 2 cut(s) 42, 58
SfcI CTRYAG 1 cut(s) 73
SmiMI CAYNNNNRTG 1 cut(s) 282
SmlI CTYRAG 2 cut(s) 100, 147
SmoI CTYRAG 2 cut(s) 100, 147
SsiI CCGC 1 cut(s) 62
TaiI ACGT 1 cut(s) 291
TaqI TCGA 1 cut(s) 282
TfiI GAWTC 2 cut(s) 116, 214
Tru1I TTAA 1 cut(s) 12
Tru9I TTAA 1 cut(s) 12
TseFI GTSAC 1 cut(s) 236
Tsp45I GTSAC 1 cut(s) 236
XceI RCATGY 1 cut(s) 19
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.