Rh7BG430300

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001606
Physical Location & Seq
Reverse (-)
49246815 .. 49252613
5799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG430300.1

Sequence Viewer

Length: 324 bp
ATGTTCTCCGTCAGCAATTTCAACCCCTCCTCGATCGGCGGCGGGCTGGCTTTTATCATCTTGCCGGACAATGAGGTTGTCGGAGACGCAGGCGGGTTCTTGGGGCTCCAGAGCGTGGAGGACCCGGGTTCGGGTTCCGGGTCGAGCTTCGTGGCGGTGGAGTTCGACACGCACATGGACGTGGAGTTCAAGAACATTAATAGCAACCACGTGGGCTTGGATCTCAACTCCATGAAAGAGAAACTGGAGATTGGGACAAGCTTTAGCTATAGGGATCATAAGGTAGTTCAAGTGCAAGTAAAGGGAAACGTTCTAGACGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

107

Amino Acids

11.35

Weight (kDa)

4.49

Isoelectric Point (pI)

26.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 2 - 101 2.1e-18 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 115
AciI CCGC 4 cut(s) 39, 42, 93, 155
AclI AACGTT 1 cut(s) 309
AclWI GGATC 2 cut(s) 228, 282
AcvI CACGTG 1 cut(s) 211
AfiI CCNNNNNNNGG 3 cut(s) 115, 130, 131
AgsI TTSAA 3 cut(s) 22, 190, 290
AjiI CACGTC 1 cut(s) 181
AloI GAACNNNNNNTCC 2 cut(s) 170, 202
AluBI AGCT 3 cut(s) 147, 261, 267
AluI AGCT 3 cut(s) 147, 261, 267
Alw26I GTCTC 1 cut(s) 78
AlwI GGATC 2 cut(s) 228, 282
Ama87I CYCGRG 1 cut(s) 124
AseI ATTAAT 1 cut(s) 198
AspS9I GGNCC 1 cut(s) 121
AsuC2I CCSGG 3 cut(s) 125, 126, 139
AvaI CYCGRG 1 cut(s) 124
AvaII GGWCC 1 cut(s) 121
BanII GRGCYC 1 cut(s) 108
BbrPI CACGTG 1 cut(s) 211
BcnI CCSGG 3 cut(s) 125, 126, 139
BcoDI GTCTC 1 cut(s) 78
BfaI CTAG 1 cut(s) 314
BfmI CTRYAG 1 cut(s) 268
BisI GCNGC 1 cut(s) 40
BlsI GCNGC 1 cut(s) 41
Bme1390I CCNGG 3 cut(s) 125, 126, 139
Bme18I GGWCC 1 cut(s) 121
BmeT110I CYCGRG 1 cut(s) 124
BmgBI CACGTC 1 cut(s) 181
BmgT120I GGNCC 1 cut(s) 121
BmiI GGNNCC 3 cut(s) 107, 123, 136
BmrFI CCNGG 3 cut(s) 125, 126, 139
BpmI CTGGAG 2 cut(s) 92, 266
BpuMI CCSGG 3 cut(s) 125, 126, 139
BsaAI YACGTR 1 cut(s) 211
BsaJI CCNNGG 1 cut(s) 124
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 130, 131
Bse1I ACTGG 1 cut(s) 249
BseDI CCNNGG 1 cut(s) 124
BseLI CCNNNNNNNGG 3 cut(s) 115, 130, 131
BseNI ACTGG 1 cut(s) 249
BseRI GAGGAG 1 cut(s) 19
Bsh1285I CGRYCG 1 cut(s) 36
BsiEI CGRYCG 1 cut(s) 36
BsiHKCI CYCGRG 1 cut(s) 124
BsiSI CCGG 3 cut(s) 65, 125, 138
BslFI GGGAC 1 cut(s) 268
BslI CCNNNNNNNGG 3 cut(s) 115, 130, 131
BsmAI GTCTC 1 cut(s) 78
BsmBI CGTCTC 1 cut(s) 78
BsmFI GGGAC 1 cut(s) 268
BsoBI CYCGRG 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 108
Bsp143I GATC 3 cut(s) 33, 220, 274
BspACI CCGC 4 cut(s) 39, 42, 93, 155
BspLI GGNNCC 3 cut(s) 107, 123, 136
BspPI GGATC 2 cut(s) 228, 282
BsrI ACTGG 1 cut(s) 249
BssECI CCNNGG 1 cut(s) 124
BssMI GATC 3 cut(s) 33, 220, 274
Bst4CI ACNGT 1 cut(s) 320
BstBAI YACGTR 1 cut(s) 211
BstC8I GCNNGC 3 cut(s) 44, 48, 91
BstKTI GATC 3 cut(s) 36, 223, 277
BstMAI GTCTC 1 cut(s) 78
BstMBI GATC 3 cut(s) 33, 220, 274
BstMCI CGRYCG 1 cut(s) 36
BstSCI CCNGG 3 cut(s) 123, 124, 137
BstSFI CTRYAG 1 cut(s) 268
BstX2I RGATCY 1 cut(s) 220
BstYI RGATCY 1 cut(s) 220
BtrI CACGTC 1 cut(s) 181
Cac8I GCNNGC 3 cut(s) 44, 48, 91
Cfr13I GGNCC 1 cut(s) 121
Cfr9I CCCGGG 1 cut(s) 124
CseI GACGC 1 cut(s) 95
CviAII CATG 2 cut(s) 175, 232
CviJI RGCY 7 cut(s) 46, 50, 106, 147, 216, 261, 267
CviKI_1 RGCY 7 cut(s) 46, 50, 106, 147, 216, 261, 267
DpnI GATC 3 cut(s) 35, 222, 276
DpnII GATC 3 cut(s) 33, 220, 274
Eco24I GRGCYC 1 cut(s) 108
Eco47I GGWCC 1 cut(s) 121
Eco72I CACGTG 1 cut(s) 211
Eco88I CYCGRG 1 cut(s) 124
EcoO109I RGGNCCY 1 cut(s) 121
EcoT38I GRGCYC 1 cut(s) 108
Esp3I CGTCTC 1 cut(s) 78
FaeI CATG 2 cut(s) 178, 235
FaiI YATR 4 cut(s) 176, 233, 270, 279
FaqI GGGAC 1 cut(s) 268
FatI CATG 2 cut(s) 174, 231
FauI CCCGC 2 cut(s) 35, 86
Fnu4HI GCNGC 1 cut(s) 40
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 1 cut(s) 40
FspBI CTAG 1 cut(s) 314
GluI GCNGC 1 cut(s) 40
GsuI CTGGAG 2 cut(s) 92, 266
HapII CCGG 3 cut(s) 65, 125, 138
HgaI GACGC 1 cut(s) 95
Hin1II CATG 2 cut(s) 178, 235
HindIII AAGCTT 1 cut(s) 259
HpaII CCGG 3 cut(s) 65, 125, 138
Hpy188I TCNGA 1 cut(s) 83
Hpy188III TCNNGA 3 cut(s) 109, 190, 314
HpyCH4III ACNGT 1 cut(s) 320
HpyCH4IV ACGT 3 cut(s) 180, 210, 309
HpyCH4V TGCA 1 cut(s) 295
HpySE526I ACGT 3 cut(s) 180, 210, 309
Hsp92II CATG 2 cut(s) 178, 235
Kzo9I GATC 3 cut(s) 33, 220, 274
LmnI GCTCC 1 cut(s) 111
LpnPI CCDG 7 cut(s) 32, 75, 78, 122, 138, 151, 230
MaeI CTAG 1 cut(s) 314
MaeII ACGT 3 cut(s) 180, 210, 309
MalI GATC 3 cut(s) 35, 222, 276
MboI GATC 3 cut(s) 33, 220, 274
MflI RGATCY 1 cut(s) 220
MhlI GDGCHC 1 cut(s) 108
MluCI AATT 1 cut(s) 16
MmeI TCCRAC 1 cut(s) 61
MnlI CCTC 4 cut(s) 37, 40, 67, 112
MseI TTAA 1 cut(s) 198
MslI CAYNNNNRTG 2 cut(s) 173, 179
MspI CCGG 3 cut(s) 65, 125, 138
MspR9I CCNGG 3 cut(s) 125, 126, 139
NciI CCSGG 3 cut(s) 125, 126, 139
NdeII GATC 3 cut(s) 33, 220, 274
NlaIII CATG 2 cut(s) 178, 235
NlaIV GGNNCC 3 cut(s) 107, 123, 136
PflMI CCANNNNNTGG 1 cut(s) 115
PkrI GCNGC 1 cut(s) 41
Ple19I CGATCG 1 cut(s) 36
PmaCI CACGTG 1 cut(s) 211
PmlI CACGTG 1 cut(s) 211
Ppu21I YACGTR 1 cut(s) 211
PpuMI RGGWCCY 1 cut(s) 121
PshBI ATTAAT 1 cut(s) 198
Psp1406I AACGTT 1 cut(s) 309
Psp5II RGGWCCY 1 cut(s) 121
PspCI CACGTG 1 cut(s) 211
PspN4I GGNNCC 3 cut(s) 107, 123, 136
PspPI GGNCC 1 cut(s) 121
PspPPI RGGWCCY 1 cut(s) 121
PsuI RGATCY 1 cut(s) 220
PvuI CGATCG 1 cut(s) 36
RseI CAYNNNNRTG 2 cut(s) 173, 179
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 1 cut(s) 40
Sau3AI GATC 3 cut(s) 33, 220, 274
Sau96I GGNCC 1 cut(s) 121
ScrFI CCNGG 3 cut(s) 125, 126, 139
SduI GDGCHC 1 cut(s) 108
SetI ASST 8 cut(s) 78, 149, 183, 213, 263, 269, 285, 312
SfcI CTRYAG 1 cut(s) 268
SinI GGWCC 1 cut(s) 121
SmaI CCCGGG 1 cut(s) 126
SmiMI CAYNNNNRTG 2 cut(s) 173, 179
Sse9I AATT 1 cut(s) 16
SsiI CCGC 4 cut(s) 39, 42, 93, 155
SspMI CTAG 1 cut(s) 314
StyD4I CCNGG 3 cut(s) 123, 124, 137
TaaI ACNGT 1 cut(s) 320
TaiI ACGT 3 cut(s) 183, 213, 312
TaqI TCGA 3 cut(s) 32, 143, 165
TasI AATT 1 cut(s) 16
TauI GCSGC 1 cut(s) 42
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TspDTI ATGAA 1 cut(s) 248
TspMI CCCGGG 1 cut(s) 124
Van91I CCANNNNNTGG 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 121
VspI ATTAAT 1 cut(s) 198
XbaI TCTAGA 1 cut(s) 313
XmaI CCCGGG 1 cut(s) 124
XspI CTAG 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.