agenet domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1351 |
| AccII | CGCG | 2 cut(s) | 1563, 1574 |
| AclI | AACGTT | 1 cut(s) | 1701 |
| AclWI | GGATC | 3 cut(s) | 816, 1703, 1730 |
| AcsI | RAATTY | 1 cut(s) | 554 |
| AcuI | CTGAAG | 2 cut(s) | 60, 1131 |
| AcyI | GRCGYC | 2 cut(s) | 231, 718 |
| AfaI | GTAC | 3 cut(s) | 68, 758, 1502 |
| AflIII | ACRYGT | 1 cut(s) | 1937 |
| AgeI | ACCGGT | 1 cut(s) | 202 |
| AjnI | CCWGG | 2 cut(s) | 454, 503 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 901, 933 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1432, 1464 |
| Alw21I | GWGCWC | 5 cut(s) | 385, 917, 1211, 1438, 1683 |
| Alw26I | GTCTC | 4 cut(s) | 174, 359, 1867, 2002 |
| Alw44I | GTGCAC | 1 cut(s) | 1434 |
| AlwI | GGATC | 3 cut(s) | 816, 1703, 1730 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1292 |
| Ama87I | CYCGRG | 1 cut(s) | 1682 |
| AoxI | GGCC | 4 cut(s) | 641, 815, 932, 1101 |
| ApaLI | GTGCAC | 1 cut(s) | 1434 |
| ApeKI | GCWGC | 3 cut(s) | 1025, 1403, 1627 |
| ApoI | RAATTY | 1 cut(s) | 554 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 358, 390 |
| AsiGI | ACCGGT | 1 cut(s) | 202 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1159, 1444 |
| AspS9I | GGNCC | 3 cut(s) | 412, 854, 1569 |
| AsuHPI | GGTGA | 5 cut(s) | 557, 742, 1402, 1600, 1937 |
| AvaI | CYCGRG | 1 cut(s) | 1682 |
| AvaII | GGWCC | 3 cut(s) | 412, 854, 1569 |
| AxyI | CCTNAGG | 2 cut(s) | 984, 1182 |
| BaeGI | GKGCMC | 1 cut(s) | 1438 |
| BanII | GRGCYC | 1 cut(s) | 1683 |
| BbsI | GAAGAC | 1 cut(s) | 1940 |
| Bbv12I | GWGCWC | 5 cut(s) | 385, 917, 1211, 1438, 1683 |
| BbvI | GCAGC | 3 cut(s) | 1012, 1390, 1639 |
| BccI | CCATC | 8 cut(s) | 41, 247, 273, 830, 902, 1042, 1262, 1579 |
| BceAI | ACGGC | 3 cut(s) | 244, 528, 576 |
| BciT130I | CCWGG | 2 cut(s) | 456, 505 |
| BclI | TGATCA | 2 cut(s) | 1342, 1954 |
| BcoDI | GTCTC | 4 cut(s) | 174, 359, 1867, 2002 |
| BfaI | CTAG | 2 cut(s) | 645, 930 |
| BfmI | CTRYAG | 2 cut(s) | 1008, 1625 |
| BglII | AGATCT | 2 cut(s) | 30, 1621 |
| BisI | GCNGC | 5 cut(s) | 1026, 1349, 1404, 1628, 1908 |
| BlsI | GCNGC | 5 cut(s) | 1027, 1350, 1405, 1629, 1909 |
| Bme1390I | CCNGG | 2 cut(s) | 456, 505 |
| Bme18I | GGWCC | 3 cut(s) | 412, 854, 1569 |
| BmeT110I | CYCGRG | 1 cut(s) | 1682 |
| BmgT120I | GGNCC | 3 cut(s) | 412, 854, 1569 |
| BmiI | GGNNCC | 2 cut(s) | 207, 413 |
| BmrFI | CCNGG | 2 cut(s) | 456, 505 |
| BmsI | GCATC | 3 cut(s) | 250, 1122, 1399 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1994 |
| BpiI | GAAGAC | 1 cut(s) | 1940 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 20, 52, 989, 1021 |
| BpmI | CTGGAG | 2 cut(s) | 101, 1407 |
| BpuEI | CTTGAG | 7 cut(s) | 604, 1145, 1171, 1402, 1627, 1805, 2000 |
| BsaHI | GRCGYC | 2 cut(s) | 231, 718 |
| BsaJI | CCNNGG | 7 cut(s) | 454, 455, 504, 780, 1572, 1890, 2006 |
| BsaWI | WCCGGW | 1 cut(s) | 202 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1432, 1462, 1967, 1997 |
| Bse118I | RCCGGY | 2 cut(s) | 202, 287 |
| Bse1I | ACTGG | 2 cut(s) | 398, 1036 |
| Bse21I | CCTNAGG | 2 cut(s) | 984, 1182 |
| Bse3DI | GCAATG | 1 cut(s) | 522 |
| BseBI | CCWGG | 2 cut(s) | 456, 505 |
| BseDI | CCNNGG | 7 cut(s) | 454, 455, 504, 780, 1572, 1890, 2006 |
| BseGI | GGATG | 1 cut(s) | 1264 |
| BseMI | GCAATG | 1 cut(s) | 522 |
| BseMII | CTCAG | 7 cut(s) | 425, 975, 1173, 1254, 1284, 1350, 1675 |
| BseNI | ACTGG | 2 cut(s) | 398, 1036 |
| BseRI | GAGGAG | 5 cut(s) | 162, 551, 1199, 1202, 1988 |
| BseSI | GKGCMC | 1 cut(s) | 1438 |
| BseXI | GCAGC | 3 cut(s) | 1012, 1390, 1639 |
| BsgI | GTGCAG | 1 cut(s) | 1962 |
| Bsh1236I | CGCG | 2 cut(s) | 1563, 1574 |
| Bsh1285I | CGRYCG | 1 cut(s) | 183 |
| BshFI | GGCC | 4 cut(s) | 643, 817, 934, 1103 |
| BshTI | ACCGGT | 1 cut(s) | 202 |
| BsiEI | CGRYCG | 1 cut(s) | 183 |
| BsiHKAI | GWGCWC | 5 cut(s) | 385, 917, 1211, 1438, 1683 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1682 |
| BsiSI | CCGG | 3 cut(s) | 203, 212, 288 |
| BslFI | GGGAC | 2 cut(s) | 472, 1285 |
| BsmAI | GTCTC | 4 cut(s) | 174, 359, 1867, 2002 |
| BsmBI | CGTCTC | 1 cut(s) | 174 |
| BsmFI | GGGAC | 2 cut(s) | 472, 1285 |
| BsnI | GGCC | 4 cut(s) | 643, 817, 934, 1103 |
| BsoBI | CYCGRG | 1 cut(s) | 1682 |
| Bsp1286I | GDGCHC | 5 cut(s) | 385, 917, 1211, 1438, 1683 |
| Bsp1407I | TGTACA | 1 cut(s) | 1500 |
| Bsp143I | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| Bsp19I | CCATGG | 1 cut(s) | 2006 |
| BspANI | GGCC | 4 cut(s) | 643, 817, 934, 1103 |
| BspCNI | CTCAG | 7 cut(s) | 426, 976, 1174, 1253, 1285, 1351, 1674 |
| BspFNI | CGCG | 2 cut(s) | 1563, 1574 |
| BspLI | GGNNCC | 2 cut(s) | 207, 413 |
| BspMAI | CTGCAG | 1 cut(s) | 1629 |
| BspPI | GGATC | 3 cut(s) | 816, 1703, 1730 |
| BspQI | GCTCTTC | 1 cut(s) | 922 |
| BsrBI | CCGCTC | 1 cut(s) | 1351 |
| BsrDI | GCAATG | 1 cut(s) | 522 |
| BsrFI | RCCGGY | 2 cut(s) | 202, 287 |
| BsrGI | TGTACA | 1 cut(s) | 1500 |
| BsrI | ACTGG | 2 cut(s) | 398, 1036 |
| BssAI | RCCGGY | 2 cut(s) | 202, 287 |
| BssECI | CCNNGG | 7 cut(s) | 454, 455, 504, 780, 1572, 1890, 2006 |
| BssMI | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| BssNI | GRCGYC | 2 cut(s) | 231, 718 |
| BssT1I | CCWWGG | 3 cut(s) | 780, 1890, 2006 |
| Bst2UI | CCWGG | 2 cut(s) | 456, 505 |
| Bst6I | CTCTTC | 8 cut(s) | 338, 663, 922, 1214, 1800, 1814, 1827, 1865 |
| BstACI | GRCGYC | 2 cut(s) | 231, 718 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1433, 1886 |
| BstAUI | TGTACA | 1 cut(s) | 1500 |
| BstC8I | GCNNGC | 2 cut(s) | 381, 1755 |
| BstDEI | CTNAG | 9 cut(s) | 434, 812, 984, 1182, 1240, 1293, 1359, 1652, 1661 |
| BstDSI | CCRYGG | 2 cut(s) | 1572, 2006 |
| BstF5I | GGATG | 1 cut(s) | 1264 |
| BstFNI | CGCG | 2 cut(s) | 1563, 1574 |
| BstKTI | GATC | 9 cut(s) | 33, 811, 1345, 1624, 1711, 1725, 1812, 1957, 1965 |
| BstMAI | GTCTC | 4 cut(s) | 174, 359, 1867, 2002 |
| BstMBI | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| BstMCI | CGRYCG | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 649, 1409, 1433, 1687, 1763, 1886 |
| BstNI | CCWGG | 2 cut(s) | 456, 505 |
| BstNSI | RCATGY | 2 cut(s) | 965, 1941 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1994 |
| BstSCI | CCNGG | 2 cut(s) | 454, 503 |
| BstSFI | CTRYAG | 2 cut(s) | 1008, 1625 |
| BstSLI | GKGCMC | 1 cut(s) | 1438 |
| BstUI | CGCG | 2 cut(s) | 1563, 1574 |
| BstV1I | GCAGC | 3 cut(s) | 1012, 1390, 1639 |
| BstV2I | GAAGAC | 1 cut(s) | 1940 |
| BstX2I | RGATCY | 4 cut(s) | 30, 808, 1621, 1708 |
| BstYI | RGATCY | 4 cut(s) | 30, 808, 1621, 1708 |
| Bsu36I | CCTNAGG | 2 cut(s) | 984, 1182 |
| BsuRI | GGCC | 4 cut(s) | 643, 817, 934, 1103 |
| BtgI | CCRYGG | 2 cut(s) | 1572, 2006 |
| BtsCI | GGATG | 1 cut(s) | 1264 |
| BtsIMutI | CAGTG | 1 cut(s) | 1029 |
| Cac8I | GCNNGC | 2 cut(s) | 381, 1755 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1292 |
| Cfr10I | RCCGGY | 2 cut(s) | 202, 287 |
| Cfr13I | GGNCC | 3 cut(s) | 412, 854, 1569 |
| Cfr42I | CCGCGG | 1 cut(s) | 1575 |
| CseI | GACGC | 2 cut(s) | 220, 707 |
| Csp6I | GTAC | 3 cut(s) | 67, 757, 1501 |
| CspAI | ACCGGT | 1 cut(s) | 202 |
| CviAII | CATG | 9 cut(s) | 136, 445, 616, 630, 704, 962, 1074, 1938, 2007 |
| CviQI | GTAC | 3 cut(s) | 67, 757, 1501 |
| DdeI | CTNAG | 9 cut(s) | 434, 812, 984, 1182, 1240, 1293, 1359, 1652, 1661 |
| DpnI | GATC | 9 cut(s) | 32, 810, 1344, 1623, 1710, 1724, 1811, 1956, 1964 |
| DpnII | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| Eam1104I | CTCTTC | 8 cut(s) | 338, 663, 922, 1214, 1800, 1814, 1827, 1865 |
| EarI | CTCTTC | 8 cut(s) | 338, 663, 922, 1214, 1800, 1814, 1827, 1865 |
| EciI | GGCGGA | 2 cut(s) | 198, 1691 |
| Ecl136II | GAGCTC | 1 cut(s) | 1681 |
| Eco130I | CCWWGG | 3 cut(s) | 780, 1890, 2006 |
| Eco147I | AGGCCT | 2 cut(s) | 643, 817 |
| Eco24I | GRGCYC | 1 cut(s) | 1683 |
| Eco32I | GATATC | 1 cut(s) | 1558 |
| Eco47I | GGWCC | 3 cut(s) | 412, 854, 1569 |
| Eco53kI | GAGCTC | 1 cut(s) | 1681 |
| Eco57I | CTGAAG | 2 cut(s) | 60, 1131 |
| Eco81I | CCTNAGG | 2 cut(s) | 984, 1182 |
| Eco88I | CYCGRG | 1 cut(s) | 1682 |
| EcoICRI | GAGCTC | 1 cut(s) | 1681 |
| EcoRII | CCWGG | 2 cut(s) | 454, 503 |
| EcoRV | GATATC | 1 cut(s) | 1558 |
| EcoT14I | CCWWGG | 3 cut(s) | 780, 1890, 2006 |
| EcoT38I | GRGCYC | 1 cut(s) | 1683 |
| ErhI | CCWWGG | 3 cut(s) | 780, 1890, 2006 |
| Esp3I | CGTCTC | 1 cut(s) | 174 |
| FaeI | CATG | 9 cut(s) | 139, 448, 619, 633, 707, 965, 1077, 1941, 2010 |
| FaqI | GGGAC | 2 cut(s) | 472, 1285 |
| FatI | CATG | 9 cut(s) | 135, 444, 615, 629, 703, 961, 1073, 1937, 2006 |
| FbaI | TGATCA | 2 cut(s) | 1342, 1954 |
| Fnu4HI | GCNGC | 5 cut(s) | 1026, 1349, 1404, 1628, 1908 |
| FokI | GGATG | 1 cut(s) | 1271 |
| FriOI | GRGCYC | 1 cut(s) | 1683 |
| Fsp4HI | GCNGC | 5 cut(s) | 1026, 1349, 1404, 1628, 1908 |
| FspBI | CTAG | 2 cut(s) | 645, 930 |
| GluI | GCNGC | 5 cut(s) | 1026, 1349, 1404, 1628, 1908 |
| GsuI | CTGGAG | 2 cut(s) | 101, 1407 |
| HaeIII | GGCC | 4 cut(s) | 643, 817, 934, 1103 |
| HapII | CCGG | 3 cut(s) | 203, 212, 288 |
| HgaI | GACGC | 2 cut(s) | 220, 707 |
| Hin1I | GRCGYC | 2 cut(s) | 231, 718 |
| Hin1II | CATG | 9 cut(s) | 139, 448, 619, 633, 707, 965, 1077, 1941, 2010 |
| HinfI | GANTC | 9 cut(s) | 97, 626, 940, 1064, 1138, 1160, 1289, 1637, 2002 |
| HpaII | CCGG | 3 cut(s) | 203, 212, 288 |
| HphI | GGTGA | 5 cut(s) | 557, 742, 1402, 1600, 1937 |
| Hpy166II | GTNNAC | 5 cut(s) | 344, 742, 759, 1393, 1436 |
| Hpy188III | TCNNGA | 8 cut(s) | 80, 364, 389, 796, 1684, 1784, 1958, 1999 |
| Hpy8I | GTNNAC | 5 cut(s) | 344, 742, 759, 1393, 1436 |
| Hpy99I | CGWCG | 1 cut(s) | 236 |
| HpyAV | CCTTC | 6 cut(s) | 152, 239, 559, 727, 894, 1106 |
| HpyCH4IV | ACGT | 1 cut(s) | 1701 |
| HpyCH4V | TGCA | 8 cut(s) | 573, 1058, 1323, 1412, 1436, 1457, 1627, 1943 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 649, 1409, 1433, 1687, 1763, 1886 |
| HpyF3I | CTNAG | 9 cut(s) | 434, 812, 984, 1182, 1240, 1293, 1359, 1652, 1661 |
| HpySE526I | ACGT | 1 cut(s) | 1701 |
| Hsp92I | GRCGYC | 2 cut(s) | 231, 718 |
| Hsp92II | CATG | 9 cut(s) | 139, 448, 619, 633, 707, 965, 1077, 1941, 2010 |
| Ksp22I | TGATCA | 2 cut(s) | 1342, 1954 |
| KspI | CCGCGG | 1 cut(s) | 1575 |
| Kzo9I | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| LguI | GCTCTTC | 1 cut(s) | 922 |
| LmnI | GCTCC | 3 cut(s) | 1206, 1678, 1975 |
| Lsp1109I | GCAGC | 3 cut(s) | 1012, 1390, 1639 |
| LweI | GCATC | 3 cut(s) | 250, 1122, 1399 |
| MaeI | CTAG | 2 cut(s) | 645, 930 |
| MaeII | ACGT | 1 cut(s) | 1701 |
| MaeIII | GTNAC | 8 cut(s) | 131, 508, 763, 1078, 1464, 1588, 1702, 1716 |
| MalI | GATC | 9 cut(s) | 32, 810, 1344, 1623, 1710, 1724, 1811, 1956, 1964 |
| MbiI | CCGCTC | 1 cut(s) | 1351 |
| MboI | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| MflI | RGATCY | 4 cut(s) | 30, 808, 1621, 1708 |
| MhlI | GDGCHC | 5 cut(s) | 385, 917, 1211, 1438, 1683 |
| MluCI | AATT | 6 cut(s) | 75, 554, 1144, 1263, 1496, 1857 |
| MlyI | GAGTC | 3 cut(s) | 934, 1298, 1996 |
| MmeI | TCCRAC | 5 cut(s) | 125, 200, 439, 912, 1020 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1159, 1444 |
| MseI | TTAA | 4 cut(s) | 525, 822, 978, 1607 |
| MspA1I | CMGCKG | 1 cut(s) | 1574 |
| MspI | CCGG | 3 cut(s) | 203, 212, 288 |
| MspR9I | CCNGG | 2 cut(s) | 456, 505 |
| MvaI | CCWGG | 2 cut(s) | 456, 505 |
| MvnI | CGCG | 2 cut(s) | 1563, 1574 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 649, 1409, 1433, 1687, 1763, 1886 |
| NcoI | CCATGG | 1 cut(s) | 2006 |
| NdeII | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| NlaIII | CATG | 9 cut(s) | 139, 448, 619, 633, 707, 965, 1077, 1941, 2010 |
| NlaIV | GGNNCC | 2 cut(s) | 207, 413 |
| NmuCI | GTSAC | 2 cut(s) | 1588, 1716 |
| NspI | RCATGY | 2 cut(s) | 965, 1941 |
| PaeR7I | CTCGAG | 1 cut(s) | 1682 |
| PasI | CCCWGGG | 1 cut(s) | 455 |
| PceI | AGGCCT | 2 cut(s) | 643, 817 |
| PciI | ACATGT | 1 cut(s) | 1937 |
| PciSI | GCTCTTC | 1 cut(s) | 922 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1698 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1159, 1444 |
| PfeI | GAWTC | 6 cut(s) | 97, 626, 1064, 1138, 1160, 1637 |
| PflFI | GACNNNGTC | 1 cut(s) | 142 |
| PinAI | ACCGGT | 1 cut(s) | 202 |
| PkrI | GCNGC | 5 cut(s) | 1027, 1350, 1405, 1629, 1909 |
| PleI | GAGTC | 3 cut(s) | 934, 1297, 1996 |
| PpsI | GAGTC | 3 cut(s) | 934, 1297, 1996 |
| PscI | ACATGT | 1 cut(s) | 1937 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1994 |
| Psp124BI | GAGCTC | 1 cut(s) | 1683 |
| Psp1406I | AACGTT | 1 cut(s) | 1701 |
| Psp6I | CCWGG | 2 cut(s) | 454, 503 |
| PspGI | CCWGG | 2 cut(s) | 454, 503 |
| PspN4I | GGNNCC | 2 cut(s) | 207, 413 |
| PspPI | GGNCC | 3 cut(s) | 412, 854, 1569 |
| PstI | CTGCAG | 1 cut(s) | 1629 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1292 |
| PsuI | RGATCY | 4 cut(s) | 30, 808, 1621, 1708 |
| PsyI | GACNNNGTC | 1 cut(s) | 142 |
| RsaI | GTAC | 3 cut(s) | 68, 758, 1502 |
| RsaNI | GTAC | 3 cut(s) | 67, 757, 1501 |
| SacI | GAGCTC | 1 cut(s) | 1683 |
| SacII | CCGCGG | 1 cut(s) | 1575 |
| SapI | GCTCTTC | 1 cut(s) | 922 |
| SaqAI | TTAA | 4 cut(s) | 525, 822, 978, 1607 |
| SatI | GCNGC | 5 cut(s) | 1026, 1349, 1404, 1628, 1908 |
| Sau3AI | GATC | 9 cut(s) | 30, 808, 1342, 1621, 1708, 1722, 1809, 1954, 1962 |
| Sau96I | GGNCC | 3 cut(s) | 412, 854, 1569 |
| SchI | GAGTC | 3 cut(s) | 934, 1298, 1996 |
| ScrFI | CCNGG | 2 cut(s) | 456, 505 |
| SduI | GDGCHC | 5 cut(s) | 385, 917, 1211, 1438, 1683 |
| SfaNI | GCATC | 3 cut(s) | 250, 1122, 1399 |
| SfcI | CTRYAG | 2 cut(s) | 1008, 1625 |
| Sfr274I | CTCGAG | 1 cut(s) | 1682 |
| Sfr303I | CCGCGG | 1 cut(s) | 1575 |
| SgrBI | CCGCGG | 1 cut(s) | 1575 |
| SinI | GGWCC | 3 cut(s) | 412, 854, 1569 |
| SlaI | CTCGAG | 1 cut(s) | 1682 |
| SmlI | CTYRAG | 8 cut(s) | 583, 1124, 1150, 1381, 1642, 1682, 1784, 1979 |
| SmoI | CTYRAG | 8 cut(s) | 583, 1124, 1150, 1381, 1642, 1682, 1784, 1979 |
| Sse9I | AATT | 6 cut(s) | 75, 554, 1144, 1263, 1496, 1857 |
| SseBI | AGGCCT | 2 cut(s) | 643, 817 |
| SspMI | CTAG | 2 cut(s) | 645, 930 |
| SstI | GAGCTC | 1 cut(s) | 1683 |
| StuI | AGGCCT | 2 cut(s) | 643, 817 |
| StyD4I | CCNGG | 2 cut(s) | 454, 503 |
| StyI | CCWWGG | 3 cut(s) | 780, 1890, 2006 |
| TaiI | ACGT | 1 cut(s) | 1704 |
| TaqI | TCGA | 9 cut(s) | 183, 336, 363, 710, 996, 1632, 1683, 1812, 2000 |
| TasI | AATT | 6 cut(s) | 75, 554, 1144, 1263, 1496, 1857 |
| TatI | WGTACW | 2 cut(s) | 756, 1500 |
| TauI | GCSGC | 2 cut(s) | 1351, 1910 |
| TfiI | GAWTC | 6 cut(s) | 97, 626, 1064, 1138, 1160, 1637 |
| Tru1I | TTAA | 4 cut(s) | 525, 822, 978, 1607 |
| Tru9I | TTAA | 4 cut(s) | 525, 822, 978, 1607 |
| TscAI | CASTG | 1 cut(s) | 1036 |
| TseFI | GTSAC | 2 cut(s) | 1588, 1716 |
| TseI | GCWGC | 3 cut(s) | 1025, 1403, 1627 |
| Tsp45I | GTSAC | 2 cut(s) | 1588, 1716 |
| TspDTI | ATGAA | 8 cut(s) | 184, 618, 692, 1062, 1275, 1500, 1509, 1946 |
| TspGWI | ACGGA | 3 cut(s) | 867, 1240, 1735 |
| TspRI | CASTG | 1 cut(s) | 1036 |
| Tth111I | GACNNNGTC | 1 cut(s) | 142 |
| VneI | GTGCAC | 1 cut(s) | 1434 |
| VpaK11BI | GGWCC | 3 cut(s) | 412, 854, 1569 |
| XapI | RAATTY | 1 cut(s) | 554 |
| XceI | RCATGY | 2 cut(s) | 965, 1941 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 787, 1036 |
| XhoI | CTCGAG | 1 cut(s) | 1682 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1159, 1444 |
| XspI | CTAG | 2 cut(s) | 645, 930 |