RLG00000026851

agenet domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000527
Physical Location & Seq
Forward (+)
6518570 .. 6524270
5701 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026851

Sequence Viewer

Length: 2862 bp
ATGGCGAAACCGAGCAGCAATACTCGGACTTGGTTCCGGAGCCGAGGGGCGAAAGTGGAGGTGCGCACAGAAGAAGAAGGCTTCCGCGGGGCGTGGTTCCCGGCGACGATCTTGGAGCCGCCGTCGAAGCCTTCTTCGGTTCTCAGCAGGAAACGAAAGAGCTTCAACTCGAACAAGGTCTTGGTCCAGTACAACACCTTCGTCACTGAGAAGGACCCAACCAAGCCGCTGACGGAGTACACCAACGTGATGTTCCTCCGGCCGTCGCCGCCGGTGGAGGCTCCCGGGAAGATATTCGAGGCCGGCGACGACGTGGACGCGTTTCACAACGACGCGTGGTGGCCGGGAGTGGTGATGAGTGTGGAAGGAGGGGAGAGGTACAGGGTGGGGTTTAGGGACCCGCCGGAGTTGCTGGTGCTTGGCCGGAGTGAGTTGAGGAGTCACTTGGATTGGGTCAACGAGATTTGGTCCAGACCAGACAAGAAGCTGATGAAGGAATCGATGTATAGTCCGGGGACTCCAATTGAAGTGAGACTTGTCAAAGAACATCTATGGTCTGCTTGGATTCCAGCAATTTATGCCGGTGCATTAGGGGGGAACTTGTTTTTGGTTCAATATAAGAGCCTAAAGAACAGTGATAAAGATGGGATTGCTACAGTGTCTGTATCTGACCATCAGATCCGACCTCGCCCTCCACGGCACAACGAAACAGGTTTTTGCTTGCTGGACATGGTGGATGCGTTCCATGATATGAGTTGGTGGGTTGGAAGTATTACAAATGTTCTTCCAGACAAAAAGTACATTGTCACTTTTAAACTTACAGATGAACAGAAAGAAGTCAGTCACTCAGAACTAAGGCTCCATATGGAATGGATTGACAAAAAATGGGAGTCTGACTTTTCGAGATTTGGGTCTGCGATGGATGATATAGAACAAACACAGCATACGTTCACAAATTCCAGAAACTCTGCGGTAGCTACACCACTTAAAAGGTCATGTGCTACCAAGGATAGCACAGGAGAAGAAAATCCTTATGCTAGCTCACAGAACAATCAGATGAAGCAGCTGGGTCCTTGCATTGATAAATCAGCTTATAGGAAAACCACAAATGAACTGAAACTACTGGACCAACCTAATGATGATGCAACATTTTTAAGTCCAACTCCTTCCAAGAAGTTAAAACGACATCCAGAAGAATCTGTTTCTGTTGATGAAGTATATGTGAGGAGAACACCAATTAAAATATCCAATAAAAAAGGCCCTGTTGGAGATGGTGTGAAGACTGGGTCGCTGCTTGGAGAACCGGGTAGTCAAAGAAAATCACAATTTGATGGGAGCAGTCCTCCACTGAAAATTCATGTTGCAGTCAAGAAGGGAAGTAGAATGGACAAGGCTGATGAAGAATGTATTGGTGATGAGCATGTAATGGACAAGACTGAATCTTCTGGTATTCAGTCAGACTCTGAAGTAACAGGAAGATCACTTGCTGGAAATTCTAGTCTCCTGCATTTGAAGGAGATTAATCAACATGATGAAGATGGAGTAAGCATTCAGACAAAAGTGAAGGATTCTGAAGATTCAACAAGAAATGGGACAACAGAAGCATCTGGAATGGAAGTTCAGGTGACTGTGCCTGGATTGTCTGCAAAGCCTGCTGCTCATGATCAGCCAGTATCATTGTGTATAGATGAAATGCCTTCTGAATGCACCATTGAGTGCTCAGTTAATCCGGTTGATGAAATGCATTCTCAATGCACTCTTAATCAGGATGACAAAATGTTTCATGAAGGCACTATGGAGTGTGCAGGCAACCCTGCTGCAACTACCAACCAACAAATTCCAGTTGCTGAGGCTGGACTACCCGGAAAGACACCTACTCAGGATCAGCCTCTACCATTGTGCATATACAAGATGCATTTTGAAAAGACTATGGAGGGCTCAAATCCAACAGAAGATGGAAAAGCTCAAGCTACTGCAATGGAAGTAGAGGTGGCTGGGGCTGAAATATCCTCAGAGACACCTTTTCATGATCAACCTTTATTATTGTGTGACATGGACTCTGAAAACACTTTGGAGGGTAACCCTGCTGGGACTGCAAAAACATCCCTTCATGATCAAGTTCAGGCATCAAGCATAGCTGAAATGTATTCTGAACATACTACTGAGGGCTCATCATACAAACGTGCTGGGACAGCAAAGCAATATGAGGTTGCAGGGAGACAAGGTGAAACTGGAATTACCAGTGACATTGAGCAAGAAGACACTCCACATCTGCCTTTTGTGAAAAAATCTCCATTTTGGAAAATGTTGGAATCCATGGATGCATTCAAAAGGTTTCCGCAACAGCCACATTTTAAGCCCTTACTGAAGGTTAAAATGTTATGCCGTGAAGGACTAGCCCTTGGAGGTATGCATATCTTTGCCGCTGTGGTCGAGTACACTTCGAAGCTGCAGGTTGATGATCCTAGTGACTCCTCCATCAACGACATTTTGGAAGCTCTAGTTGAACTGGAACGGCTGGGATTTGATGTCAAGGCACTCCAGGACCGACTGAATGAATTGCAAGACATGAAACTTAGGTTTGCAGAGCTTAAGAACAAGTCAGACGGAGTCAAAATCCTGATCACAAATTGTACGCATGAAAGAAGCAAAGGCTTTGAAGTTATCAGTGGGATGGATGCGGAGATATTGGACCTGGAGGAAAAGATCAGAGGGATACAGGCAAAAAGGGCAAAGGTGGTGTCAGAGAGGGCAGCGAAAGATTCTGAAATCAGTATGTTGGAATCAGAAGCAAATGCTATCAATGAAGGCATTCAGAGCATCGAGCATGATTTCGAAAATCTAGCAGCAGCTGCATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet DUF724

Protein Analysis

954

Amino Acids

105.92

Weight (kDa)

5.31

Isoelectric Point (pI)

48.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 16 - 91 7.8e-14 Agenet domain
Agenet PF05641 172 - 232 1.6e-07 Agenet domain
DUF724 PF05266 758 - 951 5.7e-51 Protein of unknown function (DUF724)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000527)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03300 AT1G11420 AT1G26540 AT2G47230 AT2G47230 AT3G62300 AT3G62300 AT5G23770 AT5G23770 AT5G23780 AT5G23780 AT5G23800 AT5G23800
fragaria_vesca FvH4_7g26470 FvH4_7g26480 FvH4_7g26480 FvH4_7g26480
malus_domestica MD01G1173400.v1.1 MD01G1179100.v1.1 MD07G1101600.v1.1 MD07G1240300.v1.1
prunus_persica Prupe.2G061500_v2.0.a1 Prupe.2G061500_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.3G124100_v2.0.a1
pyrus_communis pycom01g18520 pycom07g21670 pycom07g27230
rosa_chinensis RchiOBHm_Chr1g0373061 RchiOBHm_Chr1g0373071 RchiOBHm_Chr1g0373081
rosa_laevigata RLG00000001149 RLG00000016652 RLG00000026851 RLG00000026852 RLG00000026853
rosa_multiflora Rmu_co8353763.1_g000001 Rmu_sc0033012.1_g000001 Rmu_sc0033013.1_g000001 Rmu_sc0034594.1_g000001 Rmu_sc0035726.1_g000001 Rmu_ssc0000425.1_g000006 Rmu_ssc0000425.1_g000007
rosa_roxburghii Rroxscaffold_2G00111710 Rroxscaffold_3G00228370 Rroxscaffold_4G00284480 Rroxscaffold_4G00284490 Rroxscaffold_4G00284500 Rroxscaffold_5G00355260
rosa_rugosa Rorug01G0375800 Rorug01G0375900 Rorug01G0376000
rosa_samantha Rh1AG384100 Rh1AG384200 Rh1AG384300 Rh1BG348100 Rh1BG348300 Rh1BG348400 Rh1CG361500 Rh1CG361700 Rh1CG361800 Rh1DG379000 Rh1DG379200 Rh1DG379300 Rh7AG386700
rosa_wichuraiana Rw1G033870 Rw1G033880 Rw1G033890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 65
Acc36I ACCTGC 1 cut(s) 2443
AccII CGCG 3 cut(s) 87, 320, 335
AccIII TCCGGA 1 cut(s) 36
AclWI GGATC 3 cut(s) 673, 1890, 2456
AcoI YGGCCR 3 cut(s) 260, 341, 421
AcsI RAATTY 4 cut(s) 955, 1353, 1492, 1836
AcuI CTGAAG 3 cut(s) 1485, 1593, 2387
AfaI GTAC 6 cut(s) 191, 239, 380, 800, 2438, 2635
AflII CTTAAG 1 cut(s) 2591
AflIII ACRYGT 2 cut(s) 318, 333
AgsI TTSAA 9 cut(s) 166, 527, 614, 1513, 1581, 1922, 2329, 2507, 2660
AjiI CACGTC 1 cut(s) 313
AjnI CCWGG 3 cut(s) 1633, 2541, 2694
AjuI GAANNNNNNNTTGG 8 cut(s) 164, 196, 236, 268, 590, 622, 1392, 1424
AleI CACNNNNGTG 1 cut(s) 245
AloI GAACNNNNNNTCC 4 cut(s) 843, 875, 1602, 1634
Alw21I GWGCWC 1 cut(s) 1721
Alw26I GTCTC 4 cut(s) 526, 1505, 2009, 2212
AlwI GGATC 3 cut(s) 673, 1890, 2456
AlwNI CAGNNNCTG 4 cut(s) 662, 1463, 1847, 2852
Ama87I CYCGRG 1 cut(s) 284
Aor13HI TCCGGA 1 cut(s) 36
AoxI GGCC 5 cut(s) 260, 300, 341, 421, 1258
ApoI RAATTY 4 cut(s) 955, 1353, 1492, 1836
ArsI GACNNNNNNTTYG 2 cut(s) 2726, 2758
AseI ATTAAT 1 cut(s) 1521
Asp700I GAANNNNTTC 2 cut(s) 293, 2811
AspLEI GCGC 1 cut(s) 66
AspS9I GGNCC 9 cut(s) 184, 214, 397, 468, 1070, 1126, 1259, 2545, 2692
AsuC2I CCSGG 7 cut(s) 101, 285, 286, 345, 513, 1305, 1863
AsuHPI GGTGA 4 cut(s) 364, 1424, 1636, 2237
AsuII TTCGAA 2 cut(s) 2444, 2835
AsuNHI GCTAGC 1 cut(s) 1037
AvaI CYCGRG 1 cut(s) 284
AvaII GGWCC 8 cut(s) 184, 214, 397, 468, 1070, 1126, 2545, 2692
BanII GRGCYC 2 cut(s) 1940, 2171
BarI GAAGNNNNNNTAC 2 cut(s) 182, 214
BbsI GAAGAC 2 cut(s) 1286, 2265
Bbv12I GWGCWC 1 cut(s) 1721
BbvCI CCTCAGC 1 cut(s) 1848
BbvI GCAGC 9 cut(s) 27, 1075, 1278, 1642, 1804, 2436, 2765, 2839, 2858
BccI CCATC 9 cut(s) 638, 681, 913, 1265, 1325, 1532, 1949, 2486, 2668
BceAI ACGGC 5 cut(s) 106, 247, 713, 2370, 2531
BciT130I CCWGG 3 cut(s) 1635, 2543, 2696
BciVI GTATCC 1 cut(s) 2709
BclI TGATCA 4 cut(s) 1663, 2029, 2113, 2622
BcnI CCSGG 7 cut(s) 101, 285, 286, 345, 513, 1305, 1863
BcoDI GTCTC 4 cut(s) 526, 1505, 2009, 2212
BfaI CTAG 6 cut(s) 1038, 1497, 2396, 2466, 2501, 2843
BfmI CTRYAG 2 cut(s) 654, 2450
BfrI CTTAAG 1 cut(s) 2591
BfuAI ACCTGC 1 cut(s) 2443
BfuI GTATCC 1 cut(s) 2709
Bme18I GGWCC 8 cut(s) 184, 214, 397, 468, 1070, 1126, 2545, 2692
BmeT110I CYCGRG 1 cut(s) 284
BmgBI CACGTC 1 cut(s) 313
BmgT120I GGNCC 9 cut(s) 184, 214, 397, 468, 1070, 1126, 1259, 2545, 2692
BmrI ACTGGG 1 cut(s) 1293
BmsI GCATC 8 cut(s) 727, 1132, 1613, 1902, 2135, 2311, 2668, 2829
BmtI GCTAGC 1 cut(s) 1041
BmuI ACTGGG 1 cut(s) 1293
BpiI GAAGAC 2 cut(s) 1286, 2265
BplI GAGNNNNNCTC 2 cut(s) 1327, 1359
BpmI CTGGAG 2 cut(s) 2525, 2717
Bpu10I CCTNAGC 1 cut(s) 1848
Bpu14I TTCGAA 2 cut(s) 2444, 2835
BpuEI CTTGAG 1 cut(s) 1950
BpuMI CCSGG 7 cut(s) 101, 285, 286, 345, 513, 1305, 1863
Bsa29I ATCGAT 1 cut(s) 500
BsaJI CCNNGG 8 cut(s) 43, 85, 284, 512, 695, 1005, 2316, 2401
BsaWI WCCGGW 2 cut(s) 36, 1729
BsaXI ACNNNNNCTCC 8 cut(s) 107, 137, 843, 873, 1260, 1290, 2209, 2239
Bse118I RCCGGY 3 cut(s) 271, 302, 581
Bse1I ACTGG 8 cut(s) 187, 1128, 1288, 1670, 1841, 2236, 2241, 2514
Bse3DI GCAATG 1 cut(s) 1983
BseAI TCCGGA 1 cut(s) 36
BseBI CCWGG 3 cut(s) 1635, 2543, 2696
BseCI ATCGAT 1 cut(s) 500
BseDI CCNNGG 8 cut(s) 43, 85, 284, 512, 695, 1005, 2316, 2401
BseGI GGATG 8 cut(s) 742, 928, 1186, 1774, 2102, 2326, 2679, 2683
BseMI GCAATG 1 cut(s) 1983
BseMII CTCAG 8 cut(s) 157, 198, 861, 1734, 1839, 1892, 2025, 2154
BseNI ACTGG 8 cut(s) 187, 1128, 1288, 1670, 1841, 2236, 2241, 2514
BseRI GAGGAG 3 cut(s) 451, 1240, 2464
BseX3I CGGCCG 1 cut(s) 260
BseXI GCAGC 9 cut(s) 27, 1075, 1278, 1642, 1804, 2436, 2765, 2839, 2858
BseYI CCCAGC 5 cut(s) 1066, 1994, 2087, 2186, 2518
BsgI GTGCAG 1 cut(s) 1824
Bsh1236I CGCG 3 cut(s) 87, 320, 335
Bsh1285I CGRYCG 1 cut(s) 263
BshFI GGCC 5 cut(s) 262, 302, 343, 423, 1260
BshVI ATCGAT 1 cut(s) 500
BsiEI CGRYCG 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 1721
BsiHKCI CYCGRG 1 cut(s) 284
BslFI GGGAC 5 cut(s) 410, 529, 1606, 2104, 2203
BsmAI GTCTC 4 cut(s) 526, 1505, 2009, 2212
BsmFI GGGAC 5 cut(s) 410, 529, 1606, 2104, 2203
BsmI GAATGC 5 cut(s) 1548, 1709, 1744, 2324, 2811
BsnI GGCC 5 cut(s) 262, 302, 343, 423, 1260
BsoBI CYCGRG 1 cut(s) 284
Bsp119I TTCGAA 2 cut(s) 2444, 2835
Bsp1286I GDGCHC 3 cut(s) 1721, 1940, 2171
Bsp13I TCCGGA 1 cut(s) 36
Bsp19I CCATGG 1 cut(s) 2316
BspANI GGCC 5 cut(s) 262, 302, 343, 423, 1260
BspCNI CTCAG 8 cut(s) 156, 199, 860, 1733, 1840, 1891, 2024, 2155
BspDI ATCGAT 1 cut(s) 500
BspEI TCCGGA 1 cut(s) 36
BspFNI CGCG 3 cut(s) 87, 320, 335
BspHI TCATGA 4 cut(s) 1660, 1783, 2026, 2110
BspMAI CTGCAG 1 cut(s) 2454
BspMI ACCTGC 1 cut(s) 2443
BspOI GCTAGC 1 cut(s) 1041
BspPI GGATC 3 cut(s) 673, 1890, 2456
BspT104I TTCGAA 2 cut(s) 2444, 2835
BspTI CTTAAG 1 cut(s) 2591
BsrDI GCAATG 1 cut(s) 1983
BsrFI RCCGGY 3 cut(s) 271, 302, 581
BsrI ACTGG 8 cut(s) 187, 1128, 1288, 1670, 1841, 2236, 2241, 2514
BssAI RCCGGY 3 cut(s) 271, 302, 581
BssECI CCNNGG 8 cut(s) 43, 85, 284, 512, 695, 1005, 2316, 2401
BssT1I CCWWGG 3 cut(s) 1005, 2316, 2401
Bst2UI CCWGG 3 cut(s) 1635, 2543, 2696
Bst4CI ACNGT 3 cut(s) 635, 658, 1630
BstAFI CTTAAG 1 cut(s) 2591
BstAPI GCANNNNNTGC 3 cut(s) 578, 1652, 2852
BstBI TTCGAA 2 cut(s) 2444, 2835
BstC8I GCNNGC 5 cut(s) 304, 722, 1039, 1653, 1807
BstDSI CCRYGG 3 cut(s) 85, 695, 2316
BstEII GGTNACC 1 cut(s) 2078
BstF5I GGATG 8 cut(s) 742, 928, 1186, 1774, 2102, 2326, 2679, 2683
BstFNI CGCG 3 cut(s) 87, 320, 335
BstHHI GCGC 1 cut(s) 66
BstMAI GTCTC 4 cut(s) 526, 1505, 2009, 2212
BstMCI CGRYCG 1 cut(s) 263
BstNI CCWGG 3 cut(s) 1635, 2543, 2696
BstNSI RCATGY 1 cut(s) 1424
BstPI GGTNACC 1 cut(s) 2078
BstSFI CTRYAG 2 cut(s) 654, 2450
BstUI CGCG 3 cut(s) 87, 320, 335
BstV1I GCAGC 9 cut(s) 27, 1075, 1278, 1642, 1804, 2436, 2765, 2839, 2858
BstV2I GAAGAC 2 cut(s) 1286, 2265
BstX2I RGATCY 1 cut(s) 678
BstYI RGATCY 1 cut(s) 678
BstZI CGGCCG 1 cut(s) 260
Bsu15I ATCGAT 1 cut(s) 500
BsuI GTATCC 1 cut(s) 2709
BsuRI GGCC 5 cut(s) 262, 302, 343, 423, 1260
BsuTUI ATCGAT 1 cut(s) 500
BtgI CCRYGG 3 cut(s) 85, 695, 2316
BtgZI GCGATG 1 cut(s) 932
BtrI CACGTC 1 cut(s) 313
BtsCI GGATG 8 cut(s) 742, 928, 1186, 1774, 2102, 2326, 2679, 2683
BtsIMutI CAGTG 6 cut(s) 204, 640, 663, 1346, 2248, 2674
BveI ACCTGC 1 cut(s) 2443
Cac8I GCNNGC 5 cut(s) 304, 722, 1039, 1653, 1807
CaiI CAGNNNCTG 4 cut(s) 662, 1463, 1847, 2852
CciI TCATGA 4 cut(s) 1660, 1783, 2026, 2110
CfoI GCGC 1 cut(s) 66
Cfr10I RCCGGY 3 cut(s) 271, 302, 581
Cfr13I GGNCC 9 cut(s) 184, 214, 397, 468, 1070, 1126, 1259, 2545, 2692
Cfr42I CCGCGG 1 cut(s) 88
Cfr9I CCCGGG 1 cut(s) 284
ClaI ATCGAT 1 cut(s) 500
CseI GACGC 2 cut(s) 326, 341
Csp6I GTAC 6 cut(s) 190, 238, 379, 799, 2437, 2634
CviQI GTAC 6 cut(s) 190, 238, 379, 799, 2437, 2634
DraI TTTAAA 1 cut(s) 814
EaeI YGGCCR 3 cut(s) 260, 341, 421
EagI CGGCCG 1 cut(s) 260
EclXI CGGCCG 1 cut(s) 260
Eco130I CCWWGG 3 cut(s) 1005, 2316, 2401
Eco24I GRGCYC 2 cut(s) 1940, 2171
Eco47I GGWCC 8 cut(s) 184, 214, 397, 468, 1070, 1126, 2545, 2692
Eco52I CGGCCG 1 cut(s) 260
Eco57I CTGAAG 3 cut(s) 1485, 1593, 2387
Eco88I CYCGRG 1 cut(s) 284
Eco91I GGTNACC 1 cut(s) 2078
EcoO109I RGGNCCY 4 cut(s) 214, 397, 1070, 1259
EcoO65I GGTNACC 1 cut(s) 2078
EcoRII CCWGG 3 cut(s) 1633, 2541, 2694
EcoT14I CCWWGG 3 cut(s) 1005, 2316, 2401
EcoT22I ATGCAT 4 cut(s) 1746, 1917, 2326, 2415
EcoT38I GRGCYC 2 cut(s) 1940, 2171
ErhI CCWWGG 3 cut(s) 1005, 2316, 2401
FalI AAGNNNNNCTT 2 cut(s) 519, 551
FaqI GGGAC 5 cut(s) 410, 529, 1606, 2104, 2203
FauI CCCGC 2 cut(s) 80, 408
FauNDI CATATG 1 cut(s) 864
FbaI TGATCA 4 cut(s) 1663, 2029, 2113, 2622
FokI GGATG 8 cut(s) 749, 935, 1173, 1781, 2089, 2333, 2686, 2690
FriOI GRGCYC 2 cut(s) 1940, 2171
FspAI RTGCGCAY 1 cut(s) 65
FspBI CTAG 6 cut(s) 1038, 1497, 2396, 2466, 2501, 2843
FspI TGCGCA 1 cut(s) 65
GlaI GCGC 1 cut(s) 65
GsaI CCCAGC 5 cut(s) 1070, 1998, 2091, 2190, 2522
GsuI CTGGAG 2 cut(s) 2525, 2717
HaeIII GGCC 5 cut(s) 262, 302, 343, 423, 1260
HgaI GACGC 2 cut(s) 326, 341
HhaI GCGC 1 cut(s) 66
Hin6I GCGC 1 cut(s) 64
HinP1I GCGC 1 cut(s) 64
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HphI GGTGA 4 cut(s) 364, 1424, 1636, 2237
Hpy166II GTNNAC 5 cut(s) 240, 316, 457, 951, 2439
Hpy8I GTNNAC 5 cut(s) 240, 316, 457, 951, 2439
Hpy99I CGWCG 6 cut(s) 109, 127, 268, 311, 314, 335
HpyCH4III ACNGT 3 cut(s) 635, 658, 1630
HpyCH4IV ACGT 4 cut(s) 246, 312, 947, 2182
HpySE526I ACGT 4 cut(s) 246, 312, 947, 2182
HspAI GCGC 1 cut(s) 64
KflI GGGWCCC 1 cut(s) 397
Kpn2I TCCGGA 1 cut(s) 36
KroI GCCGGC 1 cut(s) 302
KroNI GCCGGC 1 cut(s) 304
Ksp22I TGATCA 4 cut(s) 1663, 2029, 2113, 2622
KspI CCGCGG 1 cut(s) 88
LmnI GCTCC 5 cut(s) 39, 115, 286, 864, 1335
Lsp1109I GCAGC 9 cut(s) 27, 1075, 1278, 1642, 1804, 2436, 2765, 2839, 2858
LweI GCATC 8 cut(s) 727, 1132, 1613, 1902, 2135, 2311, 2668, 2829
MaeI CTAG 6 cut(s) 1038, 1497, 2396, 2466, 2501, 2843
MaeII ACGT 4 cut(s) 246, 312, 947, 2182
MfeI CAATTG 1 cut(s) 522
MflI RGATCY 1 cut(s) 678
MhlI GDGCHC 3 cut(s) 1721, 1940, 2171
MluI ACGCGT 2 cut(s) 318, 333
MlyI GAGTC 7 cut(s) 448, 511, 899, 1454, 2051, 2465, 2619
MmeI TCCRAC 7 cut(s) 706, 745, 1184, 1246, 1970, 2289, 2760
Mph1103I ATGCAT 4 cut(s) 1746, 1917, 2326, 2415
MroI TCCGGA 1 cut(s) 36
MroNI GCCGGC 1 cut(s) 302
MroXI GAANNNNTTC 2 cut(s) 293, 2811
MslI CAYNNNNRTG 1 cut(s) 245
MspA1I CMGCKG 5 cut(s) 87, 229, 1066, 2426, 2852
MspCI CTTAAG 1 cut(s) 2591
MunI CAATTG 1 cut(s) 522
Mva1269I GAATGC 5 cut(s) 1548, 1709, 1744, 2324, 2811
MvaI CCWGG 3 cut(s) 1635, 2543, 2696
MvnI CGCG 3 cut(s) 87, 320, 335
NaeI GCCGGC 1 cut(s) 304
NciI CCSGG 7 cut(s) 101, 285, 286, 345, 513, 1305, 1863
NcoI CCATGG 1 cut(s) 2316
NdeI CATATG 1 cut(s) 864
NgoMIV GCCGGC 1 cut(s) 302
NheI GCTAGC 1 cut(s) 1037
NmeAIII GCCGAG 1 cut(s) 68
NmuCI GTSAC 8 cut(s) 202, 440, 805, 842, 1624, 2048, 2243, 2468
NsbI TGCGCA 1 cut(s) 65
NsiI ATGCAT 4 cut(s) 1746, 1917, 2326, 2415
NspI RCATGY 1 cut(s) 1424
NspV TTCGAA 2 cut(s) 2444, 2835
OliI CACNNNNGTG 1 cut(s) 245
PagI TCATGA 4 cut(s) 1660, 1783, 2026, 2110
PcsI WCGNNNNNNNCGW 1 cut(s) 303
PctI GAATGC 5 cut(s) 1548, 1709, 1744, 2324, 2811
PdiI GCCGGC 1 cut(s) 304
PdmI GAANNNNTTC 2 cut(s) 293, 2811
PfeI GAWTC 9 cut(s) 497, 565, 1196, 1439, 1568, 1577, 2312, 2762, 2783
PflFI GACNNNGTC 2 cut(s) 1285, 2609
PfoI TCCNGGA 1 cut(s) 2541
PleI GAGTC 7 cut(s) 447, 511, 898, 1454, 2051, 2465, 2618
PpsI GAGTC 7 cut(s) 447, 511, 898, 1454, 2051, 2465, 2618
PpuMI RGGWCCY 3 cut(s) 214, 397, 1070
PshBI ATTAAT 1 cut(s) 1521
Psp5II RGGWCCY 3 cut(s) 214, 397, 1070
Psp6I CCWGG 3 cut(s) 1633, 2541, 2694
PspEI GGTNACC 1 cut(s) 2078
PspFI CCCAGC 5 cut(s) 1066, 1994, 2087, 2186, 2518
PspGI CCWGG 3 cut(s) 1633, 2541, 2694
PspPI GGNCC 9 cut(s) 184, 214, 397, 468, 1070, 1126, 1259, 2545, 2692
PspPPI RGGWCCY 3 cut(s) 214, 397, 1070
PsrI GAACNNNNNNTAC 2 cut(s) 1104, 1136
PstI CTGCAG 1 cut(s) 2454
PstNI CAGNNNCTG 4 cut(s) 662, 1463, 1847, 2852
PsuI RGATCY 1 cut(s) 678
PsyI GACNNNGTC 2 cut(s) 1285, 2609
PvuII CAGCTG 2 cut(s) 1066, 2852
RsaI GTAC 6 cut(s) 191, 239, 380, 800, 2438, 2635
RsaNI GTAC 6 cut(s) 190, 238, 379, 799, 2437, 2634
RseI CAYNNNNRTG 1 cut(s) 245
SacII CCGCGG 1 cut(s) 88
Sau96I GGNCC 9 cut(s) 184, 214, 397, 468, 1070, 1126, 1259, 2545, 2692
SchI GAGTC 7 cut(s) 448, 511, 899, 1454, 2051, 2465, 2619
SduI GDGCHC 3 cut(s) 1721, 1940, 2171
SfaNI GCATC 8 cut(s) 727, 1132, 1613, 1902, 2135, 2311, 2668, 2829
SfcI CTRYAG 2 cut(s) 654, 2450
Sfr303I CCGCGG 1 cut(s) 88
SfuI TTCGAA 2 cut(s) 2444, 2835
SgrAI CRCCGGYG 1 cut(s) 271
SgrBI CCGCGG 1 cut(s) 88
SinI GGWCC 8 cut(s) 184, 214, 397, 468, 1070, 1126, 2545, 2692
SmaI CCCGGG 1 cut(s) 286
SmiMI CAYNNNNRTG 1 cut(s) 245
SmlI CTYRAG 2 cut(s) 1965, 2591
SmoI CTYRAG 2 cut(s) 1965, 2591
SspMI CTAG 6 cut(s) 1038, 1497, 2396, 2466, 2501, 2843
StyI CCWWGG 3 cut(s) 1005, 2316, 2401
TaaI ACNGT 3 cut(s) 635, 658, 1630
TaiI ACGT 4 cut(s) 249, 315, 950, 2185
TaqI TCGA 9 cut(s) 125, 170, 297, 500, 902, 2433, 2444, 2823, 2835
TaqII GACCGA 1 cut(s) 2562
TatI WGTACW 4 cut(s) 189, 237, 798, 2436
TauI GCSGC 4 cut(s) 121, 229, 271, 2426
TfiI GAWTC 9 cut(s) 497, 565, 1196, 1439, 1568, 1577, 2312, 2762, 2783
TscAI CASTG 6 cut(s) 211, 640, 663, 1353, 2248, 2674
TseFI GTSAC 8 cut(s) 202, 440, 805, 842, 1624, 2048, 2243, 2468
Tsp45I GTSAC 8 cut(s) 202, 440, 805, 842, 1624, 2048, 2243, 2468
TspGWI ACGGA 2 cut(s) 248, 2622
TspMI CCCGGG 1 cut(s) 284
TspRI CASTG 6 cut(s) 211, 640, 663, 1353, 2248, 2674
Tth111I GACNNNGTC 2 cut(s) 1285, 2609
Vha464I CTTAAG 1 cut(s) 2591
VpaK11BI GGWCC 8 cut(s) 184, 214, 397, 468, 1070, 1126, 2545, 2692
VspI ATTAAT 1 cut(s) 1521
XapI RAATTY 4 cut(s) 955, 1353, 1492, 1836
XceI RCATGY 1 cut(s) 1424
XmaI CCCGGG 1 cut(s) 284
XmnI GAANNNNTTC 2 cut(s) 293, 2811
XspI CTAG 6 cut(s) 1038, 1497, 2396, 2466, 2501, 2843
Zsp2I ATGCAT 4 cut(s) 1746, 1917, 2326, 2415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.