FvH4_7g26480

Agenet domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000527
Physical Location & Seq
Reverse (-)
19986552 .. 19990992
4441 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26480.t3

Sequence Viewer

Length: 2427 bp
ATGGCTCCGCCGGAAAAAAAACAAAAAAAGAAACCCAATTCCGGCGAAATGAAGAAGACTCCGTCAAAAGAGATCGTCGCCAGTCCTCCCCCTTGTTTCTATTTCAACCGCGGCTCGAGAGTCGAGGTCTGGTTTACCGAACAAGGCGCATGGTTTCCCGCTCATGTCCTCGACTCCAACTCAAACCCGCTTCGAAACCGGAAGCGCCGTCTGCTGGTGGAGTACGAGACTCTTGTCTCCGACGACGACTCCTCGAAGCCCTTGACGGAGGAGATTGAGGCGTCTTTGCTCCGGCCGGCGCCGCCGGAGGAGAGTGATGAAGGGTTTGAGGAGCATGACGTGGTGGACGCGTTTCATGTGGAGGGGTGGTGGCGTGGGGTGGTGATGAGTGTTGATGGGGACAAGTACACTGTGGGGTTTAAGAGCCCGCCGGATTTGCTGGAGCTTGGGCGCGGCGAGCTAAGGCGGCATTGGGATTGGTGCGGCGGCGCGTGGACGAGGGTGGAGAAGGAGATGATGATGCAATTGGATTTCAGCCCCTGGGATGATGTTGAAGTGAATCTACACAAGGAACGTCTTTGGTGTGCTTGGACACCAGCAACTTATGTTGGTCCTCTAGGGGGAAACTCTTTTTTGGTCCGTTATGCGAGGGCAAATAACGGTGAGGAAAGAGCAGTTGTGTCACGCCATCAGATTCGACCTTGCCCTCCACAACAAGAGGAAGGAATTTGTGACTTGATGTCAATGGTTGATGCATACCATGATAGGAGTTGGTGGGTGGGAGATATTACAGCAGTACTTACAGGGGAAAAGTACGTTGTCAAATTCAGATACAGCAAGCAGGAGATAGAATTCAGTCGATCTGACCTGAGGCACCACATGGAATGGAACGGTAGCAAATGGTTGACTACTGAGGCACTTGAAGAATCTATGGTCAATGAGGAACAGTTAAGATATGCAAAAAGCAGTTACAGAAACTCTGAAGGAAAAACACCTTGTTATACTAAGTCTCGAATGAAGCAGTCGACTGTTTTCGTGGATAAAACACCTCGTGGAAATACCATTAAGAAGCTCAAATTATCTCAGCTTCCTGATAATGGTGCAACATTTTCAAGTCCAACTCTTTCCAAGAAGTTAAAATTGGAACTCTCAGAAGACTCCTTATCTCTAGCAGCATTATTTGGCAGGGCAACACCAGTTAACATATCCAAGAGTAAAGGGCATGGAGAGAAGTCTGAGCAACAGCTGGTTTGGCATATGGATGGTGAAGCAACCAGTCCTGTTAAAAAAGGGGGTAGACAACGAAAAGCACCAGTTAATAGCCAATCTCCTGGTGTTAAACAAAATGGTAGAAAGGCTAGACGACCAAAATTGCATGTCAAGAAGAGCAGCGGAATCGACAATGAACAAATTCTTGAAGATGATCATGTAATTAACAGAATTGAATCTTCTGGTATCGGGGCAGAGAATGAAGTGATGGGGGGATCACATTCGGGAACCTCATGTCTGCTCCGCATAGAGGATAACCAACAACATACCAAAGGTGGAGTAAGCAGTCGAATGAAAGTGAAGAGAAAACTGCCTATGATAGTTGCTGAACACTCGAAATATCCAACAACAGGTTCTGAAGATTCAGTGAGACATGGCCTAGCTGCTGCTTCTGTAGTGAAAGTTCAGCTGGCTTTGTCTGGAATGCCTGAAAAGGAACCTGATCATGATCAGTCTTCATCTTTGTTCATAAAGGAAGGAGATTCTGTAAATACCATGGAGCGATCAATAAGTGGAAGAGTAACTGAAACTGGAGTGGAAGGTGACACAGACCAAGAAGAATGTCCAAATTTGCCTTTTGTGAAAAGTGTTCCACTTTGGGAAAGTATCGAGTCCATGGAAGTATTCAAAAGATTTCCACAAAAGCCTCATTTTCGTCCTCTACTGAAAACTAAGGAGGTATTACGTGAAGGATCCGCTTTCGGAAAGATGCTAGCCTTTGCCTCTCTGGTAGACCAGACCACCAAGTTACATGTTAGTGATCCTATAGACGTCATTGATAGCCACTTGGAAGCCACAGTTGAATTGGAAATGCACGGTTTTGATGTCAATGCAATAAAGCATCGTCTGACTAAGTTGCTAGAGCTCAAAGCTAGGCTGGAGGAGCTTCACAATCAATCCAAAGCAATTGAAACCAAGATCGCGGAGTGGAGTCAAAACACGGTCAAGGACACTGATACTATCAGTAAAATTGACAAGGAGATTGAGGACTTGGAAGAAAACATCAAGGTCTTGAAGGAAAAACGGGCCATGGTGGTGTCAATGTGTTCAGCCAAAGATTCAGAAGCAAACAAGTGGCAGTCAGAAGCAGGAGTTATCAGTGAAGGCATAAAGAATATCCATCGTAGTTTTGAACTACTAGCTGCTGGTCCATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet DUF724

Protein Analysis

809

Amino Acids

91.08

Weight (kDa)

6.45

Isoelectric Point (pI)

53.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 38 - 102 8.5e-12 Agenet domain
Agenet PF05641 182 - 237 1.2e-08 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000527)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03300 AT1G11420 AT1G26540 AT2G47230 AT2G47230 AT3G62300 AT3G62300 AT5G23770 AT5G23770 AT5G23780 AT5G23780 AT5G23800 AT5G23800
fragaria_vesca FvH4_7g26470 FvH4_7g26480 FvH4_7g26480 FvH4_7g26480
malus_domestica MD01G1173400.v1.1 MD01G1179100.v1.1 MD07G1101600.v1.1 MD07G1240300.v1.1
prunus_persica Prupe.2G061500_v2.0.a1 Prupe.2G061500_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.3G124100_v2.0.a1
pyrus_communis pycom01g18520 pycom07g21670 pycom07g27230
rosa_chinensis RchiOBHm_Chr1g0373061 RchiOBHm_Chr1g0373071 RchiOBHm_Chr1g0373081
rosa_laevigata RLG00000001149 RLG00000016652 RLG00000026851 RLG00000026852 RLG00000026853
rosa_multiflora Rmu_co8353763.1_g000001 Rmu_sc0033012.1_g000001 Rmu_sc0033013.1_g000001 Rmu_sc0034594.1_g000001 Rmu_sc0035726.1_g000001 Rmu_ssc0000425.1_g000006 Rmu_ssc0000425.1_g000007
rosa_roxburghii Rroxscaffold_2G00111710 Rroxscaffold_3G00228370 Rroxscaffold_4G00284480 Rroxscaffold_4G00284490 Rroxscaffold_4G00284500 Rroxscaffold_5G00355260
rosa_rugosa Rorug01G0375800 Rorug01G0375900 Rorug01G0376000
rosa_samantha Rh1AG384100 Rh1AG384200 Rh1AG384300 Rh1BG348100 Rh1BG348300 Rh1BG348400 Rh1CG361500 Rh1CG361700 Rh1CG361800 Rh1DG379000 Rh1DG379200 Rh1DG379300 Rh7AG386700
rosa_wichuraiana Rw1G033870 Rw1G033880 Rw1G033890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2043
AccB1I GGYRCC 2 cut(s) 298, 873
AccBSI CCGCTC 1 cut(s) 161
AccI GTMKAC 3 cut(s) 1025, 1297, 2001
AccII CGCG 5 cut(s) 111, 350, 453, 491, 2192
AclWI GGATC 4 cut(s) 1492, 1956, 1969, 2024
AcoI YGGCCR 1 cut(s) 293
AcsI RAATTY 5 cut(s) 726, 824, 851, 1410, 1837
AcuI CTGAAG 2 cut(s) 1002, 1647
AcyI GRCGYC 3 cut(s) 281, 299, 2040
AdeI CACNNNGTG 1 cut(s) 1052
AfaI GTAC 4 cut(s) 224, 407, 798, 815
AfiI CCNNNNNNNGG 6 cut(s) 41, 214, 620, 1097, 1519, 1619
AflIII ACRYGT 2 cut(s) 348, 2020
AhdI GACNNNNNGTC 1 cut(s) 739
AjiI CACGTC 1 cut(s) 340
AjnI CCWGG 2 cut(s) 539, 1330
AjuI GAANNNNNNNTTGG 4 cut(s) 1124, 1156, 1606, 1638
Alw21I GWGCWC 1 cut(s) 2136
Alw26I GTCTC 4 cut(s) 221, 241, 1014, 1633
AlwI GGATC 4 cut(s) 1492, 1956, 1969, 2024
AlwNI CAGNNNCTG 2 cut(s) 540, 1625
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 3 cut(s) 293, 1645, 2295
ApeKI GCWGC 5 cut(s) 1172, 1389, 1652, 1655, 2411
ApoI RAATTY 5 cut(s) 726, 824, 851, 1410, 1837
Asp700I GAANNNNTTC 1 cut(s) 1410
AspLEI GCGC 5 cut(s) 149, 207, 301, 453, 491
AspS9I GGNCC 4 cut(s) 611, 637, 2295, 2417
AsuHPI GGTGA 4 cut(s) 394, 674, 1277, 1823
AsuII TTCGAA 1 cut(s) 193
AsuNHI GCTAGC 1 cut(s) 1981
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 3 cut(s) 611, 637, 2417
AxyI CCTNAGG 1 cut(s) 869
BamHI GGATCC 1 cut(s) 1961
BanI GGYRCC 2 cut(s) 298, 873
BanII GRGCYC 2 cut(s) 428, 2136
BarI GAAGNNNNNNTAC 2 cut(s) 546, 578
BauI CACGAG 1 cut(s) 1050
BbsI GAAGAC 3 cut(s) 62, 1161, 1716
Bbv12I GWGCWC 1 cut(s) 2136
BbvI GCAGC 5 cut(s) 1184, 1401, 1639, 1642, 2398
BccI CCATC 5 cut(s) 389, 696, 1256, 1471, 2397
BceAI ACGGC 1 cut(s) 192
BcgI CGANNNNNNTGC 2 cut(s) 1378, 1412
BciT130I CCWGG 2 cut(s) 541, 1332
BclI TGATCA 3 cut(s) 1423, 1711, 1717
BcoDI GTCTC 4 cut(s) 221, 241, 1014, 1633
BfaI CTAG 8 cut(s) 617, 1169, 1359, 1649, 1982, 2129, 2142, 2408
BfmI CTRYAG 2 cut(s) 1662, 2034
BfoI RGCGCY 2 cut(s) 208, 302
BmcAI AGTACT 1 cut(s) 798
Bme1390I CCNGG 2 cut(s) 541, 1332
Bme18I GGWCC 3 cut(s) 611, 637, 2417
BmeRI GACNNNNNGTC 1 cut(s) 739
BmeT110I CYCGRG 1 cut(s) 115
BmgBI CACGTC 1 cut(s) 340
BmgT120I GGNCC 4 cut(s) 611, 637, 2295, 2417
BmiI GGNNCC 6 cut(s) 6, 300, 875, 1498, 1707, 1963
BmrFI CCNGG 2 cut(s) 541, 1332
BmsI GCATC 4 cut(s) 510, 742, 1968, 2119
BmtI GCTAGC 1 cut(s) 1985
BoxI GACNNNNGTC 1 cut(s) 233
BpiI GAAGAC 3 cut(s) 62, 1161, 1716
BpmI CTGGAG 3 cut(s) 461, 1821, 2168
Bpu10I CCTNAGC 1 cut(s) 461
Bpu14I TTCGAA 1 cut(s) 193
BsaAI YACGTR 1 cut(s) 1955
BsaBI GATNNNNATC 1 cut(s) 1716
BsaHI GRCGYC 3 cut(s) 281, 299, 2040
BsaJI CCNNGG 6 cut(s) 109, 539, 540, 1764, 1884, 2298
BsaWI WCCGGW 1 cut(s) 198
BsaXI ACNNNNNCTCC 6 cut(s) 233, 263, 353, 383, 1740, 1770
Bsc4I CCNNNNNNNGG 6 cut(s) 41, 214, 620, 1097, 1519, 1619
Bse118I RCCGGY 1 cut(s) 295
Bse1I ACTGG 5 cut(s) 81, 1196, 1275, 1313, 1804
Bse21I CCTNAGG 1 cut(s) 869
Bse8I GATNNNNATC 1 cut(s) 1716
BseBI CCWGG 2 cut(s) 541, 1332
BseDI CCNNGG 6 cut(s) 109, 539, 540, 1764, 1884, 2298
BseGI GGATG 2 cut(s) 550, 1267
BseJI GATNNNNATC 1 cut(s) 1716
BseLI CCNNNNNNNGG 6 cut(s) 41, 214, 620, 1097, 1519, 1619
BseMII CTCAG 5 cut(s) 860, 903, 1097, 1164, 1227
BseNI ACTGG 5 cut(s) 81, 1196, 1275, 1313, 1804
BseRI GAGGAG 5 cut(s) 241, 284, 323, 344, 2165
BseX3I CGGCCG 1 cut(s) 293
BseXI GCAGC 5 cut(s) 1184, 1401, 1639, 1642, 2398
Bsh1236I CGCG 5 cut(s) 111, 350, 453, 491, 2192
Bsh1285I CGRYCG 1 cut(s) 296
BshFI GGCC 3 cut(s) 295, 1647, 2297
BshNI GGYRCC 2 cut(s) 298, 873
BsiEI CGRYCG 1 cut(s) 296
BsiHKAI GWGCWC 1 cut(s) 2136
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 7 cut(s) 11, 42, 199, 292, 296, 305, 431
BslFI GGGAC 1 cut(s) 413
BslI CCNNNNNNNGG 6 cut(s) 41, 214, 620, 1097, 1519, 1619
BsmAI GTCTC 4 cut(s) 221, 241, 1014, 1633
BsmFI GGGAC 1 cut(s) 413
BsmI GAATGC 1 cut(s) 1698
BsnI GGCC 3 cut(s) 295, 1647, 2297
BsoBI CYCGRG 1 cut(s) 115
Bsp119I TTCGAA 1 cut(s) 193
Bsp1286I GDGCHC 2 cut(s) 428, 2136
Bsp19I CCATGG 3 cut(s) 1764, 1884, 2298
BspANI GGCC 3 cut(s) 295, 1647, 2297
BspCNI CTCAG 5 cut(s) 861, 904, 1096, 1163, 1228
BspFNI CGCG 5 cut(s) 111, 350, 453, 491, 2192
BspHI TCATGA 1 cut(s) 1714
BspLI GGNNCC 6 cut(s) 6, 300, 875, 1498, 1707, 1963
BspOI GCTAGC 1 cut(s) 1985
BspPI GGATC 4 cut(s) 1492, 1956, 1969, 2024
BspQI GCTCTTC 1 cut(s) 1379
BspT104I TTCGAA 1 cut(s) 193
BspT107I GGYRCC 2 cut(s) 298, 873
BsrBI CCGCTC 1 cut(s) 161
BsrFI RCCGGY 1 cut(s) 295
BsrI ACTGG 5 cut(s) 81, 1196, 1275, 1313, 1804
BssAI RCCGGY 1 cut(s) 295
BssECI CCNNGG 6 cut(s) 109, 539, 540, 1764, 1884, 2298
BssNI GRCGYC 3 cut(s) 281, 299, 2040
BssSI CACGAG 1 cut(s) 1050
BssT1I CCWWGG 3 cut(s) 1764, 1884, 2298
Bst2BI CACGAG 1 cut(s) 1050
Bst2UI CCWGG 2 cut(s) 541, 1332
Bst4CI ACNGT 8 cut(s) 412, 662, 893, 948, 1030, 2068, 2087, 2212
Bst6I CTCTTC 3 cut(s) 1379, 1565, 1780
BstACI GRCGYC 3 cut(s) 281, 299, 2040
BstBAI YACGTR 1 cut(s) 1955
BstBI TTCGAA 1 cut(s) 193
BstC8I GCNNGC 6 cut(s) 297, 428, 458, 839, 1680, 1983
BstDEI CTNAG 9 cut(s) 461, 869, 912, 1005, 1083, 1150, 1236, 1941, 2121
BstDSI CCRYGG 4 cut(s) 109, 1764, 1884, 2298
BstF5I GGATG 2 cut(s) 550, 1267
BstFNI CGCG 5 cut(s) 111, 350, 453, 491, 2192
BstH2I RGCGCY 2 cut(s) 208, 302
BstHHI GCGC 5 cut(s) 149, 207, 301, 453, 491
BstMAI GTCTC 4 cut(s) 221, 241, 1014, 1633
BstMCI CGRYCG 1 cut(s) 296
BstMWI GCNNNNNNNGC 7 cut(s) 211, 301, 436, 457, 466, 1252, 2152
BstNI CCWGG 2 cut(s) 541, 1332
BstNSI RCATGY 2 cut(s) 1379, 2024
BstPAI GACNNNNGTC 1 cut(s) 233
BstSCI CCNGG 2 cut(s) 539, 1330
BstSFI CTRYAG 2 cut(s) 1662, 2034
BstUI CGCG 5 cut(s) 111, 350, 453, 491, 2192
BstV1I GCAGC 5 cut(s) 1184, 1401, 1639, 1642, 2398
BstV2I GAAGAC 3 cut(s) 62, 1161, 1716
BstX2I RGATCY 1 cut(s) 1961
BstXI CCANNNNNNTGG 1 cut(s) 1331
BstYI RGATCY 1 cut(s) 1961
BstZI CGGCCG 1 cut(s) 293
Bsu36I CCTNAGG 1 cut(s) 869
BsuRI GGCC 3 cut(s) 295, 1647, 2297
BtgI CCRYGG 4 cut(s) 109, 1764, 1884, 2298
BtrI CACGTC 1 cut(s) 340
BtsCI GGATG 2 cut(s) 550, 1267
BtsIMutI CAGTG 4 cut(s) 408, 1641, 2220, 2374
Cac8I GCNNGC 6 cut(s) 297, 428, 458, 839, 1680, 1983
CaiI CAGNNNCTG 2 cut(s) 540, 1625
CciI TCATGA 1 cut(s) 1714
CfoI GCGC 5 cut(s) 149, 207, 301, 453, 491
Cfr10I RCCGGY 1 cut(s) 295
Cfr13I GGNCC 4 cut(s) 611, 637, 2295, 2417
Cfr42I CCGCGG 1 cut(s) 112
CseI GACGC 2 cut(s) 270, 356
Csp6I GTAC 4 cut(s) 223, 406, 797, 814
CviQI GTAC 4 cut(s) 223, 406, 797, 814
DdeI CTNAG 9 cut(s) 461, 869, 912, 1005, 1083, 1150, 1236, 1941, 2121
DinI GGCGCC 1 cut(s) 300
DraIII CACNNNGTG 1 cut(s) 1052
DriI GACNNNNNGTC 1 cut(s) 739
EaeI YGGCCR 1 cut(s) 293
EagI CGGCCG 1 cut(s) 293
Eam1104I CTCTTC 3 cut(s) 1379, 1565, 1780
Eam1105I GACNNNNNGTC 1 cut(s) 739
EarI CTCTTC 3 cut(s) 1379, 1565, 1780
Ecl136II GAGCTC 1 cut(s) 2134
EclXI CGGCCG 1 cut(s) 293
Eco130I CCWWGG 3 cut(s) 1764, 1884, 2298
Eco24I GRGCYC 2 cut(s) 428, 2136
Eco47I GGWCC 3 cut(s) 611, 637, 2417
Eco52I CGGCCG 1 cut(s) 293
Eco53kI GAGCTC 1 cut(s) 2134
Eco57I CTGAAG 2 cut(s) 1002, 1647
Eco81I CCTNAGG 1 cut(s) 869
Eco88I CYCGRG 1 cut(s) 115
EcoICRI GAGCTC 1 cut(s) 2134
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 2 cut(s) 539, 1330
EcoT14I CCWWGG 3 cut(s) 1764, 1884, 2298
EcoT22I ATGCAT 1 cut(s) 757
EcoT38I GRGCYC 2 cut(s) 428, 2136
EgeI GGCGCC 1 cut(s) 300
EheI GGCGCC 1 cut(s) 300
ErhI CCWWGG 3 cut(s) 1764, 1884, 2298
FaqI GGGAC 1 cut(s) 413
FauI CCCGC 3 cut(s) 166, 195, 435
FauNDI CATATG 1 cut(s) 1257
FbaI TGATCA 3 cut(s) 1423, 1711, 1717
FblI GTMKAC 3 cut(s) 1025, 1297, 2001
FokI GGATG 2 cut(s) 557, 1274
FriOI GRGCYC 2 cut(s) 428, 2136
FspBI CTAG 8 cut(s) 617, 1169, 1359, 1649, 1982, 2129, 2142, 2408
GlaI GCGC 5 cut(s) 148, 206, 300, 452, 490
GsuI CTGGAG 3 cut(s) 461, 1821, 2168
HaeII RGCGCY 2 cut(s) 208, 302
HaeIII GGCC 3 cut(s) 295, 1647, 2297
HapII CCGG 7 cut(s) 11, 42, 199, 292, 296, 305, 431
HgaI GACGC 2 cut(s) 270, 356
HhaI GCGC 5 cut(s) 149, 207, 301, 453, 491
Hin1I GRCGYC 3 cut(s) 281, 299, 2040
Hin6I GCGC 5 cut(s) 147, 205, 299, 451, 489
HinP1I GCGC 5 cut(s) 147, 205, 299, 451, 489
HincII GTYRAC 3 cut(s) 906, 1026, 1201
HindII GTYRAC 3 cut(s) 906, 1026, 1201
HpaI GTTAAC 1 cut(s) 1201
HpaII CCGG 7 cut(s) 11, 42, 199, 292, 296, 305, 431
HphI GGTGA 4 cut(s) 394, 674, 1277, 1823
Hpy166II GTNNAC 9 cut(s) 135, 346, 408, 495, 906, 1026, 1201, 1298, 2002
Hpy188III TCNNGA 9 cut(s) 117, 1011, 1091, 1381, 1415, 1494, 1689, 1715, 2281
Hpy8I GTNNAC 9 cut(s) 135, 346, 408, 495, 906, 1026, 1201, 1298, 2002
Hpy99I CGWCG 3 cut(s) 80, 245, 248
HpyAV CCTTC 9 cut(s) 314, 502, 716, 977, 1739, 1802, 1952, 2278, 2366
HpyCH4III ACNGT 8 cut(s) 412, 662, 893, 948, 1030, 2068, 2087, 2212
HpyCH4IV ACGT 5 cut(s) 339, 574, 816, 1954, 2040
HpyCH4V TGCA 7 cut(s) 523, 755, 959, 1103, 1375, 2083, 2102
HpyF10VI GCNNNNNNNGC 7 cut(s) 211, 301, 436, 457, 466, 1252, 2152
HpyF3I CTNAG 9 cut(s) 461, 869, 912, 1005, 1083, 1150, 1236, 1941, 2121
HpySE526I ACGT 5 cut(s) 339, 574, 816, 1954, 2040
Hsp92I GRCGYC 3 cut(s) 281, 299, 2040
HspAI GCGC 5 cut(s) 147, 205, 299, 451, 489
KasI GGCGCC 1 cut(s) 298
KroI GCCGGC 1 cut(s) 295
KroNI GCCGGC 1 cut(s) 297
Ksp22I TGATCA 3 cut(s) 1423, 1711, 1717
KspAI GTTAAC 1 cut(s) 1201
KspI CCGCGG 1 cut(s) 112
LguI GCTCTTC 1 cut(s) 1379
LmnI GCTCC 7 cut(s) 10, 294, 331, 442, 1515, 1768, 2152
Lsp1109I GCAGC 5 cut(s) 1184, 1401, 1639, 1642, 2398
LweI GCATC 4 cut(s) 510, 742, 1968, 2119
MaeI CTAG 8 cut(s) 617, 1169, 1359, 1649, 1982, 2129, 2142, 2408
MaeII ACGT 5 cut(s) 339, 574, 816, 1954, 2040
MaeIII GTNAC 6 cut(s) 681, 731, 968, 1789, 1811, 2016
MbiI CCGCTC 1 cut(s) 161
MfeI CAATTG 2 cut(s) 524, 2175
MflI RGATCY 1 cut(s) 1961
MhlI GDGCHC 2 cut(s) 428, 2136
MluI ACGCGT 1 cut(s) 348
Mly113I GGCGCC 1 cut(s) 299
MlyI GAGTC 8 cut(s) 52, 129, 167, 223, 242, 1151, 1889, 2209
MmeI TCCRAC 4 cut(s) 201, 264, 1142, 1637
Mph1103I ATGCAT 1 cut(s) 757
MroNI GCCGGC 1 cut(s) 295
MroXI GAANNNNTTC 1 cut(s) 1410
MseI TTAA 9 cut(s) 420, 950, 1065, 1136, 1200, 1284, 1317, 1338, 1434
MslI CAYNNNNRTG 3 cut(s) 1260, 2025, 2303
MspA1I CMGCKG 4 cut(s) 111, 1246, 1392, 1678
MspI CCGG 7 cut(s) 11, 42, 199, 292, 296, 305, 431
MspR9I CCNGG 2 cut(s) 541, 1332
MunI CAATTG 2 cut(s) 524, 2175
Mva1269I GAATGC 1 cut(s) 1698
MvaI CCWGG 2 cut(s) 541, 1332
MvnI CGCG 5 cut(s) 111, 350, 453, 491, 2192
MwoI GCNNNNNNNGC 7 cut(s) 211, 301, 436, 457, 466, 1252, 2152
NaeI GCCGGC 1 cut(s) 297
NarI GGCGCC 1 cut(s) 299
NcoI CCATGG 3 cut(s) 1764, 1884, 2298
NdeI CATATG 1 cut(s) 1257
NgoMIV GCCGGC 1 cut(s) 295
NheI GCTAGC 1 cut(s) 1981
NlaIV GGNNCC 6 cut(s) 6, 300, 875, 1498, 1707, 1963
NmuCI GTSAC 3 cut(s) 681, 731, 1811
NsiI ATGCAT 1 cut(s) 757
NspI RCATGY 2 cut(s) 1379, 2024
NspV TTCGAA 1 cut(s) 193
PaeR7I CTCGAG 1 cut(s) 115
PagI TCATGA 1 cut(s) 1714
PasI CCCWGGG 1 cut(s) 540
PciI ACATGT 1 cut(s) 2020
PciSI GCTCTTC 1 cut(s) 1379
PctI GAATGC 1 cut(s) 1698
PdiI GCCGGC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 1410
PfeI GAWTC 8 cut(s) 559, 694, 926, 1395, 1445, 1631, 1751, 2327
PflFI GACNNNGTC 1 cut(s) 61
PleI GAGTC 8 cut(s) 52, 128, 167, 223, 242, 1151, 1888, 2208
PluTI GGCGCC 1 cut(s) 302
PpsI GAGTC 8 cut(s) 52, 128, 167, 223, 242, 1151, 1888, 2208
Ppu21I YACGTR 1 cut(s) 1955
PscI ACATGT 1 cut(s) 2020
PshAI GACNNNNGTC 1 cut(s) 233
Psp124BI GAGCTC 1 cut(s) 2136
Psp6I CCWGG 2 cut(s) 539, 1330
PspGI CCWGG 2 cut(s) 539, 1330
PspN4I GGNNCC 6 cut(s) 6, 300, 875, 1498, 1707, 1963
PspPI GGNCC 4 cut(s) 611, 637, 2295, 2417
PsrI GAACNNNNNNTAC 2 cut(s) 1656, 1688
PstNI CAGNNNCTG 2 cut(s) 540, 1625
PsuI RGATCY 1 cut(s) 1961
PsyI GACNNNGTC 1 cut(s) 61
PvuII CAGCTG 2 cut(s) 1246, 1678
RsaI GTAC 4 cut(s) 224, 407, 798, 815
RsaNI GTAC 4 cut(s) 223, 406, 797, 814
RseI CAYNNNNRTG 3 cut(s) 1260, 2025, 2303
SacI GAGCTC 1 cut(s) 2136
SacII CCGCGG 1 cut(s) 112
SalI GTCGAC 1 cut(s) 1024
SapI GCTCTTC 1 cut(s) 1379
SaqAI TTAA 9 cut(s) 420, 950, 1065, 1136, 1200, 1284, 1317, 1338, 1434
Sau96I GGNCC 4 cut(s) 611, 637, 2295, 2417
ScaI AGTACT 1 cut(s) 798
SchI GAGTC 8 cut(s) 52, 129, 167, 223, 242, 1151, 1889, 2209
ScrFI CCNGG 2 cut(s) 541, 1332
SduI GDGCHC 2 cut(s) 428, 2136
SfaNI GCATC 4 cut(s) 510, 742, 1968, 2119
SfcI CTRYAG 2 cut(s) 1662, 2034
SfoI GGCGCC 1 cut(s) 300
Sfr274I CTCGAG 1 cut(s) 115
Sfr303I CCGCGG 1 cut(s) 112
SfuI TTCGAA 1 cut(s) 193
SgrBI CCGCGG 1 cut(s) 112
SinI GGWCC 3 cut(s) 611, 637, 2417
SlaI CTCGAG 1 cut(s) 115
SmiMI CAYNNNNRTG 3 cut(s) 1260, 2025, 2303
SmlI CTYRAG 1 cut(s) 115
SmoI CTYRAG 1 cut(s) 115
SspDI GGCGCC 1 cut(s) 298
SspMI CTAG 8 cut(s) 617, 1169, 1359, 1649, 1982, 2129, 2142, 2408
SstI GAGCTC 1 cut(s) 2136
StyD4I CCNGG 2 cut(s) 539, 1330
StyI CCWWGG 3 cut(s) 1764, 1884, 2298
TaaI ACNGT 8 cut(s) 412, 662, 893, 948, 1030, 2068, 2087, 2212
TaiI ACGT 5 cut(s) 342, 577, 819, 1957, 2043
TatI WGTACW 2 cut(s) 405, 796
TauI GCSGC 6 cut(s) 114, 304, 456, 469, 486, 489
TfiI GAWTC 8 cut(s) 559, 694, 926, 1395, 1445, 1631, 1751, 2327
Tru1I TTAA 9 cut(s) 420, 950, 1065, 1136, 1200, 1284, 1317, 1338, 1434
Tru9I TTAA 9 cut(s) 420, 950, 1065, 1136, 1200, 1284, 1317, 1338, 1434
TscAI CASTG 4 cut(s) 415, 1641, 2227, 2374
TseFI GTSAC 3 cut(s) 681, 731, 1811
TseI GCWGC 5 cut(s) 1172, 1389, 1652, 1655, 2411
Tsp45I GTSAC 3 cut(s) 681, 731, 1811
TspDTI ATGAA 9 cut(s) 65, 333, 344, 1031, 1419, 1485, 1577, 1716, 1726
TspGWI ACGGA 3 cut(s) 51, 281, 629
TspRI CASTG 4 cut(s) 415, 1641, 2227, 2374
Tth111I GACNNNGTC 1 cut(s) 61
VpaK11BI GGWCC 3 cut(s) 611, 637, 2417
XapI RAATTY 5 cut(s) 726, 824, 851, 1410, 1837
XceI RCATGY 2 cut(s) 1379, 2024
XcmI CCANNNNNNNNNTGG 1 cut(s) 2071
XhoI CTCGAG 1 cut(s) 115
XmiI GTMKAC 3 cut(s) 1025, 1297, 2001
XmnI GAANNNNTTC 1 cut(s) 1410
XspI CTAG 8 cut(s) 617, 1169, 1359, 1649, 1982, 2129, 2142, 2408
ZraI GACGTC 1 cut(s) 2041
ZrmI AGTACT 1 cut(s) 798
Zsp2I ATGCAT 1 cut(s) 757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.