AT2G47230

agenet domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
19386966 .. 19390234
3269 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G47230.1

Sequence Viewer

Length: 2106 bp
ATGGAGGAAACGATTAGGAAAGGTTCTGAAGTGGAAGTGTCTTCTACAGAAGAAGGTTTTGCAGATGCATGGTTCAGAGGTATCCTCCAAGAAAATCCTACCAAATCAGGTCGCAAAAAGCTCCGTGTTCGTTACTTGACTCTGTTAAACGACGACGCTTTGTCTCCTCTTATCGAGAACATTGAACCGAGGTTTATTCGACCGGTTCCGCCGGAGAATGAATACAACGGTATCGTTTTGGAGGAAGGAACGGTGGTTGATGCTGACCACAAAGACGGATGGTGGACCGGTGTCATTATTAAGAAATTGGAGAATGGCAAGTTTTGGGTTTATTATGATTCTCCACCTGACATTATTGAGTTCGAGAGAAACCAATTGAGACCTCATTTGCGCTGGTCCGGTTGGAAATGGCTCCGACCAGATATTCAGGAATTGGATAAGTCCATGTTTAGCTCCGGGACAATGGCGGAAGTGAGTACTATTGTAGATAAAGCTGAAGTTGCGTGGTTCCCTGCTATGATAATTAAAGAGATTGAAGTGGATGGTGAGAAGAAATTCATCGTGAAGGACTGTAATAAACACTTGAGCTTTAGTGGTGATGAGGCGAGAACCAACAGTACCATTGATTCGTCCCGTGTTAGACCCACACCGCCTCCTTTTCCAGTTGAAAAGTACGAATTGATGGATCGTGTGGAGGTGTTTCGTGGTTCGGTATGGCGTCAAGGTTTGGTAAGAGGAGTTCTCGATCACAACTGTTACATGGTTTGTTTAGTGGTTACAAAGGAGGAACCAGTGGTTAAACACTCAGATCTTAGGCCTTGTAAAGTGTGGGAAGATGGGGTTTGGCAGGACGGACCAAAGCAAACCCCTGTGATAGAAACTCCTTCCAACGTCATGAAAACGAAGCCAATGCGCTCTTGTTCTGGTGCTAAGTCAATGACTCCTAAAAGGACCACAAAACATGCCAGAAGATCACTGAATCTTGAGAAAAGTGCAGAGACACTCACAAAAGCTGAAAGTAGAGCTGCCACTGGAGAATTGAGAAGTAAGAGGGCTAATGATGTTATTAATGATAATACTCCTCTGGTCATAACCCCACAAGTGAAACCAATAGCCTCTGTTGAACCTGTAACCCCTTCCCGAGTCAGAACTGCAACACCGTTGAAACAAACAAAGGCTGATACTCAAGGAAAGTCTTCCCCCAAGAAGACACTTGAGCCAATGAGAGATGAAAATGGCTTAGAAAATTCAACTCGACAGAAGGTACTTGAGGAGAAGAATAGCGAAAAGAAGGGTAGGAAAAGAAAAAGACAAGAAGAACACAACTCAGACCTTAAGGAGACTGATGAGAGTTGCAATGGTCAAATGGCCGAGATCAATGATACAAGCAGTATCTGCAACGATGTTGATGATCAGCCTCTCGCTGCTTGGATAAATTTGCCTACTGAGACATCCATTGATCATAGCCCGATTGTGGTGAATAATGCTGCTATTGCCACCGATGTTGAGGAAAGACAAGCAAATGATACACTAATGATTTTACCTTTTGCAAAGAAGTCACCGTTTTGGAAGATGTATGAGACACAGGAGGTATGCAAAATAGCACCACAGAGTCCACATTTCAGCCCGCTGTTCGAGGCTAAAGAAGAACTCCGCGAATGGACAGCCGTTGGTATGATGGTGAGTTTCTATGGTTTATTAGAGGAAGTAAAAAACCTGCAACTCGATGTTTCCCCAAGCACTCTAGGTAGCCTCAGTTGTTCTTTTGCCGAGCTAGAGAAGCACGGTTTTGACGTTGCAGCCCCTCAGTCACGAATCAACAAAATGCTGTCTCTCCAAGATGAGCGAGCAAAGAAAGCAGAGGAAAGAAAAGGTCTTGAGAAGAAGATTGAAGCAGGAGAGATAGAAGGGCACACGTATGAAGAAGAAATGGCTGAGTTAGAACTCAAAATTCTGGAGCTGAAGAGACAACAAGTGGTTGCGAAAGAGATGAAGGAAGCTACAGACAAAGTGACAAGTGGAATGAAATCATATGCAGAAATGATTAATCAAGAGATAGAAGATTTGAGGCTTGAGTTTCAGTCAACTGCTTCTGCTCCATGGTAA

Protein Analysis

701

Amino Acids

79.61

Weight (kDa)

5.54

Isoelectric Point (pI)

54.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 8 - 71 4.4e-14 Agenet domain
Agenet PF05641 153 - 218 1.3e-10 Agenet domain
DUF724 PF05266 514 - 700 5.5e-74 Protein of unknown function (DUF724)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000527)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03300 AT1G11420 AT1G26540 AT2G47230 AT2G47230 AT3G62300 AT3G62300 AT5G23770 AT5G23770 AT5G23780 AT5G23780 AT5G23800 AT5G23800
fragaria_vesca FvH4_7g26470 FvH4_7g26480 FvH4_7g26480 FvH4_7g26480
malus_domestica MD01G1173400.v1.1 MD01G1179100.v1.1 MD07G1101600.v1.1 MD07G1240300.v1.1
prunus_persica Prupe.2G061500_v2.0.a1 Prupe.2G061500_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.3G124100_v2.0.a1
pyrus_communis pycom01g18520 pycom07g21670 pycom07g27230
rosa_chinensis RchiOBHm_Chr1g0373061 RchiOBHm_Chr1g0373071 RchiOBHm_Chr1g0373081
rosa_laevigata RLG00000001149 RLG00000016652 RLG00000026851 RLG00000026852 RLG00000026853
rosa_multiflora Rmu_co8353763.1_g000001 Rmu_sc0033012.1_g000001 Rmu_sc0033013.1_g000001 Rmu_sc0034594.1_g000001 Rmu_sc0035726.1_g000001 Rmu_ssc0000425.1_g000006 Rmu_ssc0000425.1_g000007
rosa_roxburghii Rroxscaffold_2G00111710 Rroxscaffold_3G00228370 Rroxscaffold_4G00284480 Rroxscaffold_4G00284490 Rroxscaffold_4G00284500 Rroxscaffold_5G00355260
rosa_rugosa Rorug01G0375800 Rorug01G0375900 Rorug01G0376000
rosa_samantha Rh1AG384100 Rh1AG384200 Rh1AG384300 Rh1BG348100 Rh1BG348300 Rh1BG348400 Rh1CG361500 Rh1CG361700 Rh1CG361800 Rh1DG379000 Rh1DG379200 Rh1DG379300 Rh7AG386700
rosa_wichuraiana Rw1G033870 Rw1G033880 Rw1G033890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1725
AccII CGCG 1 cut(s) 1656
AciI CCGC 5 cut(s) 209, 467, 650, 1628, 1654
AclWI GGATC 1 cut(s) 693
AcoI YGGCCR 1 cut(s) 1368
AcsI RAATTY 4 cut(s) 554, 1246, 1435, 1950
AcuI CTGAAG 3 cut(s) 48, 516, 1982
AcyI GRCGYC 1 cut(s) 718
AfaI GTAC 4 cut(s) 478, 619, 674, 1266
AfiI CCNNNNNNNGG 1 cut(s) 1474
AflII CTTAAG 1 cut(s) 1334
AflIII ACRYGT 1 cut(s) 1914
AgeI ACCGGT 2 cut(s) 202, 287
AgsI TTSAA 7 cut(s) 185, 536, 668, 1124, 1165, 1251, 1892
AhdI GACNNNNNGTC 1 cut(s) 160
AluBI AGCT 9 cut(s) 121, 453, 494, 588, 1013, 1025, 1774, 1960, 2000
AluI AGCT 9 cut(s) 121, 453, 494, 588, 1013, 1025, 1774, 1960, 2000
Alw26I GTCTC 8 cut(s) 168, 373, 992, 1334, 1442, 1574, 1836, 1960
AlwI GGATC 1 cut(s) 693
AlwNI CAGNNNCTG 1 cut(s) 1395
Ama87I CYCGRG 1 cut(s) 1140
AoxI GGCC 2 cut(s) 815, 1368
ApeKI GCWGC 4 cut(s) 1025, 1424, 1487, 1799
ApoI RAATTY 4 cut(s) 554, 1246, 1435, 1950
AseI ATTAAT 2 cut(s) 1068, 2046
AsiGI ACCGGT 2 cut(s) 202, 287
Asp700I GAANNNNTTC 2 cut(s) 554, 1195
AspLEI GCGC 2 cut(s) 393, 915
AspS9I GGNCC 4 cut(s) 285, 396, 854, 951
AsuC2I CCSGG 1 cut(s) 457
AsuHPI GGTGA 5 cut(s) 557, 608, 1489, 1551, 1693
AvaI CYCGRG 1 cut(s) 1140
AvaII GGWCC 4 cut(s) 285, 396, 854, 951
BaeGI GKGCMC 1 cut(s) 1914
BaeI ACNNNNGTAYC 2 cut(s) 214, 247
BbsI GAAGAC 3 cut(s) 33, 1188, 1214
BbvI GCAGC 4 cut(s) 1012, 1411, 1474, 1811
BccI CCATC 5 cut(s) 273, 536, 676, 830, 1672
BceAI ACGGC 1 cut(s) 1652
BcgI CGANNNNNNTGC 2 cut(s) 892, 926
BciVI GTATCC 1 cut(s) 92
BclI TGATCA 2 cut(s) 1411, 1459
BcnI CCSGG 1 cut(s) 457
BcoDI GTCTC 8 cut(s) 168, 373, 992, 1334, 1442, 1574, 1836, 1960
BfaI CTAG 2 cut(s) 1745, 1775
BfmI CTRYAG 2 cut(s) 45, 2001
BfrI CTTAAG 1 cut(s) 1334
BfuAI ACCTGC 1 cut(s) 1725
BfuI GTATCC 1 cut(s) 92
BglII AGATCT 1 cut(s) 808
BisI GCNGC 4 cut(s) 1026, 1425, 1488, 1800
BlsI GCNGC 4 cut(s) 1027, 1426, 1489, 1801
BmcAI AGTACT 1 cut(s) 478
Bme1390I CCNGG 1 cut(s) 457
Bme18I GGWCC 4 cut(s) 285, 396, 854, 951
BmeRI GACNNNNNGTC 1 cut(s) 160
BmeT110I CYCGRG 1 cut(s) 1140
BmgT120I GGNCC 4 cut(s) 285, 396, 854, 951
BmiI GGNNCC 4 cut(s) 207, 413, 509, 789
BmrFI CCNGG 1 cut(s) 457
BmsI GCATC 2 cut(s) 55, 250
BoxI GACNNNNGTC 1 cut(s) 290
BpiI GAAGAC 3 cut(s) 33, 1188, 1214
BplI GAGNNNNNCTC 4 cut(s) 69, 101, 726, 758
BpmI CTGGAG 2 cut(s) 1053, 1976
BpuEI CTTGAG 7 cut(s) 604, 1004, 1170, 1235, 1289, 1898, 2093
BpuMI CCSGG 1 cut(s) 457
BsaAI YACGTR 1 cut(s) 1917
BsaHI GRCGYC 1 cut(s) 718
BsaI GGTCTC 1 cut(s) 373
BsaJI CCNNGG 2 cut(s) 188, 2099
BsaWI WCCGGW 3 cut(s) 202, 287, 398
BsaXI ACNNNNNCTCC 2 cut(s) 637, 667
Bsc4I CCNNNNNNNGG 1 cut(s) 1474
Bse118I RCCGGY 2 cut(s) 202, 287
Bse1I ACTGG 3 cut(s) 662, 791, 1036
Bse3DI GCAATG 1 cut(s) 1363
BseDI CCNNGG 2 cut(s) 188, 2099
BseGI GGATG 3 cut(s) 284, 547, 1451
BseLI CCNNNNNNNGG 1 cut(s) 1474
BseMI GCAATG 1 cut(s) 1363
BseMII CTCAG 6 cut(s) 819, 1341, 1437, 1768, 1820, 1926
BseNI ACTGG 3 cut(s) 662, 791, 1036
BseRI GAGGAG 4 cut(s) 156, 750, 1071, 1286
BseSI GKGCMC 1 cut(s) 1914
BseXI GCAGC 4 cut(s) 1012, 1411, 1474, 1811
BsgI GTGCAG 1 cut(s) 1014
Bsh1236I CGCG 1 cut(s) 1656
Bsh1285I CGRYCG 1 cut(s) 203
BshFI GGCC 2 cut(s) 817, 1370
BshTI ACCGGT 2 cut(s) 202, 287
BsiEI CGRYCG 1 cut(s) 203
BsiHKCI CYCGRG 1 cut(s) 1140
BsiSI CCGG 5 cut(s) 203, 212, 288, 399, 456
BslFI GGGAC 2 cut(s) 472, 616
BslI CCNNNNNNNGG 1 cut(s) 1474
BsmAI GTCTC 8 cut(s) 168, 373, 992, 1334, 1442, 1574, 1836, 1960
BsmFI GGGAC 2 cut(s) 472, 616
BsnI GGCC 2 cut(s) 817, 1370
Bso31I GGTCTC 1 cut(s) 373
BsoBI CYCGRG 1 cut(s) 1140
Bsp1286I GDGCHC 1 cut(s) 1914
Bsp143I GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
Bsp19I CCATGG 1 cut(s) 2099
BspACI CCGC 5 cut(s) 209, 467, 650, 1628, 1654
BspANI GGCC 2 cut(s) 817, 1370
BspCNI CTCAG 6 cut(s) 818, 1340, 1438, 1767, 1819, 1927
BspFNI CGCG 1 cut(s) 1656
BspHI TCATGA 1 cut(s) 894
BspLI GGNNCC 4 cut(s) 207, 413, 509, 789
BspMI ACCTGC 1 cut(s) 1725
BspPI GGATC 1 cut(s) 693
BspTI CTTAAG 1 cut(s) 1334
BspTNI GGTCTC 1 cut(s) 373
BsrDI GCAATG 1 cut(s) 1363
BsrFI RCCGGY 2 cut(s) 202, 287
BsrI ACTGG 3 cut(s) 662, 791, 1036
BssAI RCCGGY 2 cut(s) 202, 287
BssECI CCNNGG 2 cut(s) 188, 2099
BssMI GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
BssNI GRCGYC 1 cut(s) 718
BssT1I CCWWGG 1 cut(s) 2099
Bst4CI ACNGT 8 cut(s) 230, 253, 572, 617, 755, 1161, 1563, 1787
Bst6I CTCTTC 1 cut(s) 1958
BstACI GRCGYC 1 cut(s) 718
BstAFI CTTAAG 1 cut(s) 1334
BstAPI GCANNNNNTGC 1 cut(s) 1395
BstBAI YACGTR 1 cut(s) 1917
BstC8I GCNNGC 2 cut(s) 1628, 1848
BstDEI CTNAG 9 cut(s) 805, 812, 930, 1240, 1327, 1446, 1754, 1806, 1935
BstDSI CCRYGG 1 cut(s) 2099
BstF5I GGATG 3 cut(s) 284, 547, 1451
BstFNI CGCG 1 cut(s) 1656
BstHHI GCGC 2 cut(s) 393, 915
BstKTI GATC 7 cut(s) 688, 748, 811, 974, 1377, 1414, 1462
BstMAI GTCTC 8 cut(s) 168, 373, 992, 1334, 1442, 1574, 1836, 1960
BstMBI GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
BstMCI CGRYCG 1 cut(s) 203
BstMWI GCNNNNNNNGC 5 cut(s) 500, 1395, 1493, 1780, 1856
BstNSI RCATGY 1 cut(s) 965
BstPAI GACNNNNGTC 1 cut(s) 290
BstSCI CCNGG 1 cut(s) 455
BstSFI CTRYAG 2 cut(s) 45, 2001
BstSLI GKGCMC 1 cut(s) 1914
BstUI CGCG 1 cut(s) 1656
BstV1I GCAGC 4 cut(s) 1012, 1411, 1474, 1811
BstV2I GAAGAC 3 cut(s) 33, 1188, 1214
BstX2I RGATCY 1 cut(s) 808
BstYI RGATCY 1 cut(s) 808
BsuI GTATCC 1 cut(s) 92
BsuRI GGCC 2 cut(s) 817, 1370
BtgI CCRYGG 1 cut(s) 2099
BtsCI GGATG 3 cut(s) 284, 547, 1451
BtsIMutI CAGTG 3 cut(s) 798, 974, 1029
BveI ACCTGC 1 cut(s) 1725
Cac8I GCNNGC 2 cut(s) 1628, 1848
CaiI CAGNNNCTG 1 cut(s) 1395
CciI TCATGA 1 cut(s) 894
CfoI GCGC 2 cut(s) 393, 915
Cfr10I RCCGGY 2 cut(s) 202, 287
Cfr13I GGNCC 4 cut(s) 285, 396, 854, 951
CseI GACGC 2 cut(s) 164, 707
Csp6I GTAC 4 cut(s) 477, 618, 673, 1265
CspAI ACCGGT 2 cut(s) 202, 287
CspCI CAANNNNNGTGG 2 cut(s) 1486, 1521
CviAII CATG 6 cut(s) 69, 445, 760, 895, 962, 2100
CviQI GTAC 4 cut(s) 477, 618, 673, 1265
DdeI CTNAG 9 cut(s) 805, 812, 930, 1240, 1327, 1446, 1754, 1806, 1935
DpnI GATC 7 cut(s) 687, 747, 810, 973, 1376, 1413, 1461
DpnII GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
DriI GACNNNNNGTC 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 1368
Eam1104I CTCTTC 1 cut(s) 1958
Eam1105I GACNNNNNGTC 1 cut(s) 160
EarI CTCTTC 1 cut(s) 1958
EciI GGCGGA 2 cut(s) 198, 482
Eco130I CCWWGG 1 cut(s) 2099
Eco147I AGGCCT 1 cut(s) 817
Eco31I GGTCTC 1 cut(s) 373
Eco47I GGWCC 4 cut(s) 285, 396, 854, 951
Eco57I CTGAAG 3 cut(s) 48, 516, 1982
Eco88I CYCGRG 1 cut(s) 1140
EcoT14I CCWWGG 1 cut(s) 2099
EcoT22I ATGCAT 1 cut(s) 70
ErhI CCWWGG 1 cut(s) 2099
FaeI CATG 6 cut(s) 72, 448, 763, 898, 965, 2103
FaqI GGGAC 2 cut(s) 472, 616
FatI CATG 6 cut(s) 68, 444, 759, 894, 961, 2099
FauI CCCGC 1 cut(s) 1635
FauNDI CATATG 1 cut(s) 2032
FbaI TGATCA 2 cut(s) 1411, 1459
Fnu4HI GCNGC 4 cut(s) 1026, 1425, 1488, 1800
FokI GGATG 3 cut(s) 291, 554, 1438
Fsp4HI GCNGC 4 cut(s) 1026, 1425, 1488, 1800
FspBI CTAG 2 cut(s) 1745, 1775
GlaI GCGC 2 cut(s) 392, 914
GluI GCNGC 4 cut(s) 1026, 1425, 1488, 1800
GsuI CTGGAG 2 cut(s) 1053, 1976
HaeIII GGCC 2 cut(s) 817, 1370
HapII CCGG 5 cut(s) 203, 212, 288, 399, 456
HgaI GACGC 2 cut(s) 164, 707
HhaI GCGC 2 cut(s) 393, 915
Hin1I GRCGYC 1 cut(s) 718
Hin1II CATG 6 cut(s) 72, 448, 763, 898, 965, 2103
Hin6I GCGC 2 cut(s) 391, 913
HinP1I GCGC 2 cut(s) 391, 913
HincII GTYRAC 1 cut(s) 2085
HindII GTYRAC 1 cut(s) 2085
HinfI GANTC 8 cut(s) 139, 338, 626, 940, 979, 1143, 1612, 1815
HpaII CCGG 5 cut(s) 203, 212, 288, 399, 456
HphI GGTGA 5 cut(s) 557, 608, 1489, 1551, 1693
Hpy166II GTNNAC 3 cut(s) 285, 1616, 2085
Hpy188I TCNGA 6 cut(s) 28, 77, 416, 808, 1148, 1330
Hpy8I GTNNAC 3 cut(s) 285, 1616, 2085
Hpy99I CGWCG 2 cut(s) 155, 158
HpyAV CCTTC 9 cut(s) 47, 239, 559, 894, 1146, 1255, 1285, 1901, 1987
HpyCH4III ACNGT 8 cut(s) 230, 253, 572, 617, 755, 1161, 1563, 1787
HpyCH4IV ACGT 3 cut(s) 891, 1794, 1916
HpyF10VI GCNNNNNNNGC 5 cut(s) 500, 1395, 1493, 1780, 1856
HpyF3I CTNAG 9 cut(s) 805, 812, 930, 1240, 1327, 1446, 1754, 1806, 1935
HpySE526I ACGT 3 cut(s) 891, 1794, 1916
Hsp92I GRCGYC 1 cut(s) 718
Hsp92II CATG 6 cut(s) 72, 448, 763, 898, 965, 2103
HspAI GCGC 2 cut(s) 391, 913
Ksp22I TGATCA 2 cut(s) 1411, 1459
Kzo9I GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
LmnI GCTCC 5 cut(s) 126, 417, 458, 1957, 2101
Lsp1109I GCAGC 4 cut(s) 1012, 1411, 1474, 1811
LweI GCATC 2 cut(s) 55, 250
MaeI CTAG 2 cut(s) 1745, 1775
MaeII ACGT 3 cut(s) 891, 1794, 1916
MaeIII GTNAC 7 cut(s) 131, 755, 775, 1129, 1557, 1809, 2011
MalI GATC 7 cut(s) 687, 747, 810, 973, 1376, 1413, 1461
MboI GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
MfeI CAATTG 1 cut(s) 374
MflI RGATCY 1 cut(s) 808
MhlI GDGCHC 1 cut(s) 1914
MlyI GAGTC 4 cut(s) 133, 934, 1152, 1621
MmeI TCCRAC 3 cut(s) 383, 439, 912
Mph1103I ATGCAT 1 cut(s) 70
MroXI GAANNNNTTC 2 cut(s) 554, 1195
MseI TTAA 7 cut(s) 146, 300, 525, 798, 1068, 1335, 2046
MslI CAYNNNNRTG 1 cut(s) 1917
MspA1I CMGCKG 1 cut(s) 1630
MspCI CTTAAG 1 cut(s) 1334
MspI CCGG 5 cut(s) 203, 212, 288, 399, 456
MspR9I CCNGG 1 cut(s) 457
MunI CAATTG 1 cut(s) 374
MvnI CGCG 1 cut(s) 1656
MwoI GCNNNNNNNGC 5 cut(s) 500, 1395, 1493, 1780, 1856
NciI CCSGG 1 cut(s) 457
NcoI CCATGG 1 cut(s) 2099
NdeI CATATG 1 cut(s) 2032
NdeII GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
NlaIII CATG 6 cut(s) 72, 448, 763, 898, 965, 2103
NlaIV GGNNCC 4 cut(s) 207, 413, 509, 789
NmeAIII GCCGAG 2 cut(s) 1396, 1795
NmuCI GTSAC 3 cut(s) 1557, 1809, 2011
NsiI ATGCAT 1 cut(s) 70
NspI RCATGY 1 cut(s) 965
PagI TCATGA 1 cut(s) 894
PceI AGGCCT 1 cut(s) 817
PcsI WCGNNNNNNNCGW 1 cut(s) 1791
PdmI GAANNNNTTC 2 cut(s) 554, 1195
PfeI GAWTC 4 cut(s) 338, 626, 979, 1815
PfoI TCCNGGA 1 cut(s) 455
PinAI ACCGGT 2 cut(s) 202, 287
PkrI GCNGC 4 cut(s) 1027, 1426, 1489, 1801
PleI GAGTC 4 cut(s) 133, 934, 1151, 1620
PpsI GAGTC 4 cut(s) 133, 934, 1151, 1620
Ppu21I YACGTR 1 cut(s) 1917
PshAI GACNNNNGTC 1 cut(s) 290
PshBI ATTAAT 2 cut(s) 1068, 2046
PspN4I GGNNCC 4 cut(s) 207, 413, 509, 789
PspPI GGNCC 4 cut(s) 285, 396, 854, 951
PsrI GAACNNNNNNTAC 4 cut(s) 601, 633, 723, 755
PstNI CAGNNNCTG 1 cut(s) 1395
PsuI RGATCY 1 cut(s) 808
RsaI GTAC 4 cut(s) 478, 619, 674, 1266
RsaNI GTAC 4 cut(s) 477, 618, 673, 1265
RseI CAYNNNNRTG 1 cut(s) 1917
SaqAI TTAA 7 cut(s) 146, 300, 525, 798, 1068, 1335, 2046
SatI GCNGC 4 cut(s) 1026, 1425, 1488, 1800
Sau3AI GATC 7 cut(s) 685, 745, 808, 971, 1374, 1411, 1459
Sau96I GGNCC 4 cut(s) 285, 396, 854, 951
ScaI AGTACT 1 cut(s) 478
SchI GAGTC 4 cut(s) 133, 934, 1152, 1621
ScrFI CCNGG 1 cut(s) 457
SduI GDGCHC 1 cut(s) 1914
SfaNI GCATC 2 cut(s) 55, 250
SfcI CTRYAG 2 cut(s) 45, 2001
SinI GGWCC 4 cut(s) 285, 396, 854, 951
SmiMI CAYNNNNRTG 1 cut(s) 1917
SmlI CTYRAG 8 cut(s) 583, 983, 1185, 1214, 1268, 1334, 1877, 2072
SmoI CTYRAG 8 cut(s) 583, 983, 1185, 1214, 1268, 1334, 1877, 2072
SseBI AGGCCT 1 cut(s) 817
SsiI CCGC 5 cut(s) 209, 467, 650, 1628, 1654
SspMI CTAG 2 cut(s) 1745, 1775
StuI AGGCCT 1 cut(s) 817
StyD4I CCNGG 1 cut(s) 455
StyI CCWWGG 1 cut(s) 2099
TaaI ACNGT 8 cut(s) 230, 253, 572, 617, 755, 1161, 1563, 1787
TaiI ACGT 3 cut(s) 894, 1797, 1919
TaqI TCGA 7 cut(s) 174, 199, 363, 744, 1255, 1635, 1725
TatI WGTACW 1 cut(s) 476
TfiI GAWTC 4 cut(s) 338, 626, 979, 1815
Tru1I TTAA 7 cut(s) 146, 300, 525, 798, 1068, 1335, 2046
Tru9I TTAA 7 cut(s) 146, 300, 525, 798, 1068, 1335, 2046
TscAI CASTG 3 cut(s) 798, 981, 1036
TseFI GTSAC 3 cut(s) 1557, 1809, 2011
TseI GCWGC 4 cut(s) 1025, 1424, 1487, 1799
Tsp45I GTSAC 3 cut(s) 1557, 1809, 2011
TspDTI ATGAA 7 cut(s) 234, 547, 911, 1245, 1935, 2006, 2039
TspGWI ACGGA 3 cut(s) 113, 291, 867
TspRI CASTG 3 cut(s) 798, 981, 1036
Vha464I CTTAAG 1 cut(s) 1334
VpaK11BI GGWCC 4 cut(s) 285, 396, 854, 951
VspI ATTAAT 2 cut(s) 1068, 2046
XapI RAATTY 4 cut(s) 554, 1246, 1435, 1950
XceI RCATGY 1 cut(s) 965
XmnI GAANNNNTTC 2 cut(s) 554, 1195
XspI CTAG 2 cut(s) 1745, 1775
ZrmI AGTACT 1 cut(s) 478
Zsp2I ATGCAT 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.