Rh1DG379000

Agenet domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000527
Physical Location & Seq
Reverse (-)
60103137 .. 60107186
4050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG379000.1

Sequence Viewer

Length: 1812 bp
ATGGAGGAGCAGAAGAGCAATGGTGGCCATAACCCTGTTGGGTATTTCACCCAAGGCGCCAACGTCGAAGTTTGCAGCAAAGAAAAAGGGTCTGAAGGTGCATGGTTCCCTGCAACAATCTTAGAGCCACCAGCAAACTCCTCAGCCTCAAAAAGAAAGACCTTTACTTCCAACAAGGTTTTGATTCAGTACAAGACTCTTGTCTCCGACAAGGACCCCACCAAGCCACTTGTCGAGCACACCACCGTGGGGCTTCTCCGGCCGCCGGCTCCGGCTGACAATGCGGAGGAGGAGAGGTTTGAGGAGAACGACGTCGTTGATGCTTTTCACCTTGAAGGTTGGTGGACTGGGTTGGTGATGAGTATTGTGGGGGAGAAGTATGGTGTGGGGTTTAAGAAACCGCCGGATTATCTGGAGCTGGAGCGCAGTAAGTTGAGGTCACATTGGGATTGGGACCATGGGGTTTGGACCAGAGCCCCAAGACAGGTGTTGAGGGGATCAAATTACAAGCCATGGACACCAGTTGAAGTGAATCTGGAAAAAGATCATCTATGGTCTTCGTGGTTACCTGCATTTTTTATTGGTCAAGTAGGGGGTGACTCTTTCTTGGTGCAATACAAATATAAGACCCCAGAAAATGATGATAAAAATGGTCTTGTTAAAGTAGTTGTAGCTGATCACCAGATTCGACCTCTCCCTCCACAGCAAGAGGAAAAAGATTTTCACTTGTCACAAATGGTGGATGCATTCTGTGATATGGGTTGGTGGGTAGGGGACATTACAGAAGTTCTTACAGACAAGAGGTGCGTTGTCACTTTCAGATTCACAAAGGAGGAGAAGGAGTTTTGTCATCCAGAGTTAAGGTGCCACTTGGAATGGATTGGTAAACAATGGGTGACTAGCGATTCGGAATTTCATTCTACTAAGTATTGTGGAGTACAACCGAGACATGCACGTGAAATTTCCAGTAATTCTGTAGGCAAAACGCCTTGTCATACCAAGTTTAGGATGAAGAAATTGAGTCATTGCATGGATAAGTTACCTTGTGAAAGAACCAAAAACAAACTGAAAATATCTCAGCATCCTAGCAATGATTCAACATTTTTAAGTCCCACTCCCTGCAAGAAGTTAAAAGGGGAAGATTCAGAAGACACCTTGTCTCTTGCACAATCCTATCAAAGGAAAACCCCAGCTAAAACATCAAAGAGGAAAGGCCTATTTACTGATGAAGAGACGAATGAGCAACAGCAGTTTGAACAACTGGATAGTCTAGCAATCAATTTTGTAAAAAGGGGGAGACAACCAAACTCACAATTTGTAAAACGTGGAAGGAAGGGTATACCCCGAAAATTGCATGTCAGCAATGGCAGTAAAAGTGTAAGAGGTGACCAAGAATACATTGAAGATGAAAATGTAATGACCAGGATTGAATCTTTTGGTATCCCGTCAGAGCCTGAAGCAATTGGGGGCTTGCATGCTGGAAATTCATGTCTGCTTCCTGTGAAGGAGATTAAACATGGTAATGAAGATAAAGTGAGCAGTGGAATAAAACAGGCTGAGTTACTTGTTCAACACCCAAAAGATCGAGCAGTAGGTTGTATGAATGATATACTTGAAAAGCCTGCAAATCCAAGCGGGAACCAAAACCTGGCAACTTACCAAAGAAAGAAAAGGTTCAAACTGACAGGTGTAAAGCATAACGGAACTGGAGTTTTTACTGATGCTGAAGTGTCCAAGACTAATGTTGTTGAACAAATAGGTATGATAGAACATGACAAACCAATATCTATAAACCCTATACCCTATGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet DUF724

Protein Analysis

603

Amino Acids

68.31

Weight (kDa)

8.27

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 19 - 91 4.3e-12 Agenet domain
Agenet PF05641 173 - 234 7.3e-08 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000527)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03300 AT1G11420 AT1G26540 AT2G47230 AT2G47230 AT3G62300 AT3G62300 AT5G23770 AT5G23770 AT5G23780 AT5G23780 AT5G23800 AT5G23800
fragaria_vesca FvH4_7g26470 FvH4_7g26480 FvH4_7g26480 FvH4_7g26480
malus_domestica MD01G1173400.v1.1 MD01G1179100.v1.1 MD07G1101600.v1.1 MD07G1240300.v1.1
prunus_persica Prupe.2G061500_v2.0.a1 Prupe.2G061500_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G061600_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269000_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.2G269100_v2.0.a1 Prupe.3G124100_v2.0.a1
pyrus_communis pycom01g18520 pycom07g21670 pycom07g27230
rosa_chinensis RchiOBHm_Chr1g0373061 RchiOBHm_Chr1g0373071 RchiOBHm_Chr1g0373081
rosa_laevigata RLG00000001149 RLG00000016652 RLG00000026851 RLG00000026852 RLG00000026853
rosa_multiflora Rmu_co8353763.1_g000001 Rmu_sc0033012.1_g000001 Rmu_sc0033013.1_g000001 Rmu_sc0034594.1_g000001 Rmu_sc0035726.1_g000001 Rmu_ssc0000425.1_g000006 Rmu_ssc0000425.1_g000007
rosa_roxburghii Rroxscaffold_2G00111710 Rroxscaffold_3G00228370 Rroxscaffold_4G00284480 Rroxscaffold_4G00284490 Rroxscaffold_4G00284500 Rroxscaffold_5G00355260
rosa_rugosa Rorug01G0375800 Rorug01G0375900 Rorug01G0376000
rosa_samantha Rh1AG384100 Rh1AG384200 Rh1AG384300 Rh1BG348100 Rh1BG348300 Rh1BG348400 Rh1CG361500 Rh1CG361700 Rh1CG361800 Rh1DG379000 Rh1DG379200 Rh1DG379300 Rh7AG386700
rosa_wichuraiana Rw1G033870 Rw1G033880 Rw1G033890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 315
Acc36I ACCTGC 1 cut(s) 577
AccB1I GGYRCC 2 cut(s) 56, 864
AccB7I CCANNNNNTGG 1 cut(s) 1648
AccI GTMKAC 1 cut(s) 1339
AciI CCGC 4 cut(s) 263, 284, 401, 1635
AclWI GGATC 1 cut(s) 505
AcoI YGGCCR 2 cut(s) 25, 260
AcsI RAATTY 3 cut(s) 911, 960, 1483
AcuI CTGAAG 3 cut(s) 114, 1476, 1746
AcvI CACGTG 1 cut(s) 956
AcyI GRCGYC 2 cut(s) 57, 312
AfaI GTAC 2 cut(s) 191, 939
AfiI CCNNNNNNNGG 6 cut(s) 249, 265, 484, 1005, 1179, 1648
AhdI GACNNNNNGTC 1 cut(s) 1156
AjnI CCWGG 2 cut(s) 1421, 1647
AleI CACNNNNGTG 1 cut(s) 245
AluBI AGCT 3 cut(s) 418, 674, 1193
AluI AGCT 3 cut(s) 418, 674, 1193
Alw21I GWGCWC 1 cut(s) 240
Alw26I GTCTC 5 cut(s) 208, 940, 1164, 1226, 1291
AlwI GGATC 1 cut(s) 505
AlwNI CAGNNNCTG 1 cut(s) 1454
AoxI GGCC 3 cut(s) 25, 260, 1213
ApeKI GCWGC 1 cut(s) 75
ApoI RAATTY 3 cut(s) 911, 960, 1483
ArsI GACNNNNNNTTYG 2 cut(s) 889, 921
Asp700I GAANNNNTTC 1 cut(s) 1673
AspLEI GCGC 2 cut(s) 59, 426
AspS9I GGNCC 3 cut(s) 214, 454, 468
AsuHPI GGTGA 7 cut(s) 40, 320, 367, 608, 671, 907, 1397
AvaII GGWCC 3 cut(s) 214, 454, 468
BalI TGGCCA 1 cut(s) 27
BanI GGYRCC 2 cut(s) 56, 864
BanII GRGCYC 1 cut(s) 478
BbrPI CACGTG 1 cut(s) 956
BbsI GAAGAC 2 cut(s) 549, 1155
Bbv12I GWGCWC 1 cut(s) 240
BbvCI CCTCAGC 1 cut(s) 142
BbvI GCAGC 1 cut(s) 87
BciT130I CCWGG 2 cut(s) 1423, 1649
BciVI GTATCC 1 cut(s) 1451
BclI TGATCA 1 cut(s) 676
BcoDI GTCTC 5 cut(s) 208, 940, 1164, 1226, 1291
BfaI CTAG 3 cut(s) 900, 1086, 1271
BfmI CTRYAG 1 cut(s) 975
BfoI RGCGCY 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 577
BfuI GTATCC 1 cut(s) 1451
BisI GCNGC 2 cut(s) 76, 263
BlsI GCNGC 2 cut(s) 77, 264
Bme1390I CCNGG 2 cut(s) 1423, 1649
Bme18I GGWCC 3 cut(s) 214, 454, 468
BmeRI GACNNNNNGTC 1 cut(s) 1156
BmgT120I GGNCC 3 cut(s) 214, 454, 468
BmiI GGNNCC 7 cut(s) 58, 107, 216, 270, 455, 866, 1640
BmrFI CCNGG 2 cut(s) 1423, 1649
BmrI ACTGGG 1 cut(s) 357
BmsI GCATC 4 cut(s) 310, 733, 1090, 1711
BmuI ACTGGG 1 cut(s) 357
BoxI GACNNNNGTC 1 cut(s) 200
BpiI GAAGAC 2 cut(s) 549, 1155
BpmI CTGGAG 3 cut(s) 434, 440, 1728
Bpu10I CCTNAGC 1 cut(s) 142
BsaAI YACGTR 1 cut(s) 956
BsaHI GRCGYC 2 cut(s) 57, 312
BsaJI CCNNGG 4 cut(s) 52, 246, 457, 512
BsaXI ACNNNNNCTCC 4 cut(s) 281, 311, 827, 857
Bsc4I CCNNNNNNNGG 6 cut(s) 249, 265, 484, 1005, 1179, 1648
Bse118I RCCGGY 1 cut(s) 265
Bse1I ACTGG 5 cut(s) 352, 521, 966, 1266, 1711
Bse3DI GCAATG 4 cut(s) 25, 1024, 1096, 1369
BseBI CCWGG 2 cut(s) 1423, 1649
BseDI CCNNGG 4 cut(s) 52, 246, 457, 512
BseGI GGATG 4 cut(s) 748, 850, 1014, 1081
BseLI CCNNNNNNNGG 6 cut(s) 249, 265, 484, 1005, 1179, 1648
BseMI GCAATG 4 cut(s) 25, 1024, 1096, 1369
BseMII CTCAG 3 cut(s) 156, 1091, 1548
BseNI ACTGG 5 cut(s) 352, 521, 966, 1266, 1711
BseRI GAGGAG 6 cut(s) 20, 130, 302, 305, 317, 848
BseX3I CGGCCG 1 cut(s) 260
BseXI GCAGC 1 cut(s) 87
BseYI CCCAGC 1 cut(s) 1189
Bsh1285I CGRYCG 1 cut(s) 263
BshFI GGCC 3 cut(s) 27, 262, 1215
BshNI GGYRCC 2 cut(s) 56, 864
BsiEI CGRYCG 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 240
BsiSI CCGG 4 cut(s) 259, 266, 272, 404
BslFI GGGAC 3 cut(s) 467, 788, 1095
BslI CCNNNNNNNGG 6 cut(s) 249, 265, 484, 1005, 1179, 1648
BsmAI GTCTC 5 cut(s) 208, 940, 1164, 1226, 1291
BsmBI CGTCTC 1 cut(s) 1226
BsmFI GGGAC 3 cut(s) 467, 788, 1095
BsmI GAATGC 1 cut(s) 746
BsnI GGCC 3 cut(s) 27, 262, 1215
Bsp1286I GDGCHC 2 cut(s) 240, 478
Bsp143I GATC 4 cut(s) 497, 544, 676, 1582
Bsp19I CCATGG 2 cut(s) 457, 512
BspACI CCGC 4 cut(s) 263, 284, 401, 1635
BspANI GGCC 3 cut(s) 27, 262, 1215
BspCNI CTCAG 3 cut(s) 155, 1090, 1549
BspLI GGNNCC 7 cut(s) 58, 107, 216, 270, 455, 866, 1640
BspMI ACCTGC 1 cut(s) 577
BspPI GGATC 1 cut(s) 505
BspQI GCTCTTC 1 cut(s) 8
BspT107I GGYRCC 2 cut(s) 56, 864
BsrDI GCAATG 4 cut(s) 25, 1024, 1096, 1369
BsrFI RCCGGY 1 cut(s) 265
BsrI ACTGG 5 cut(s) 352, 521, 966, 1266, 1711
BssAI RCCGGY 1 cut(s) 265
BssECI CCNNGG 4 cut(s) 52, 246, 457, 512
BssMI GATC 4 cut(s) 497, 544, 676, 1582
BssNAI GTATAC 1 cut(s) 1340
BssNI GRCGYC 2 cut(s) 57, 312
BssT1I CCWWGG 3 cut(s) 52, 457, 512
Bst1107I GTATAC 1 cut(s) 1340
Bst2UI CCWGG 2 cut(s) 1423, 1649
Bst4CI ACNGT 1 cut(s) 247
Bst6I CTCTTC 2 cut(s) 8, 1224
BstACI GRCGYC 2 cut(s) 57, 312
BstBAI YACGTR 1 cut(s) 956
BstC8I GCNNGC 4 cut(s) 267, 1472, 1476, 1623
BstDEI CTNAG 5 cut(s) 121, 142, 924, 1077, 1557
BstDSI CCRYGG 3 cut(s) 246, 457, 512
BstEII GGTNACC 2 cut(s) 564, 1385
BstENI CCTNNNNNAGG 1 cut(s) 1177
BstF5I GGATG 4 cut(s) 748, 850, 1014, 1081
BstH2I RGCGCY 1 cut(s) 60
BstHHI GCGC 2 cut(s) 59, 426
BstKTI GATC 4 cut(s) 500, 547, 679, 1585
BstMAI GTCTC 5 cut(s) 208, 940, 1164, 1226, 1291
BstMBI GATC 4 cut(s) 497, 544, 676, 1582
BstMCI CGRYCG 1 cut(s) 263
BstMWI GCNNNNNNNGC 3 cut(s) 24, 259, 281
BstNI CCWGG 2 cut(s) 1423, 1649
BstNSI RCATGY 3 cut(s) 953, 1358, 1478
BstPAI GACNNNNGTC 1 cut(s) 200
BstPI GGTNACC 2 cut(s) 564, 1385
BstSCI CCNGG 2 cut(s) 1421, 1647
BstSFI CTRYAG 1 cut(s) 975
BstV1I GCAGC 1 cut(s) 87
BstV2I GAAGAC 2 cut(s) 549, 1155
BstZ17I GTATAC 1 cut(s) 1340
BstZI CGGCCG 1 cut(s) 260
BsuI GTATCC 1 cut(s) 1451
BsuRI GGCC 3 cut(s) 27, 262, 1215
BtgI CCRYGG 3 cut(s) 246, 457, 512
BtsCI GGATG 4 cut(s) 748, 850, 1014, 1081
BtsI GCAGTG 1 cut(s) 1546
BtsIMutI CAGTG 1 cut(s) 1546
BveI ACCTGC 1 cut(s) 577
Cac8I GCNNGC 4 cut(s) 267, 1472, 1476, 1623
CaiI CAGNNNCTG 1 cut(s) 1454
CfoI GCGC 2 cut(s) 59, 426
Cfr10I RCCGGY 1 cut(s) 265
Cfr13I GGNCC 3 cut(s) 214, 454, 468
Csp6I GTAC 2 cut(s) 190, 938
CviQI GTAC 2 cut(s) 190, 938
DdeI CTNAG 5 cut(s) 121, 142, 924, 1077, 1557
DinI GGCGCC 1 cut(s) 58
DpnI GATC 4 cut(s) 499, 546, 678, 1584
DpnII GATC 4 cut(s) 497, 544, 676, 1582
DriI GACNNNNNGTC 1 cut(s) 1156
EaeI YGGCCR 2 cut(s) 25, 260
EagI CGGCCG 1 cut(s) 260
Eam1104I CTCTTC 2 cut(s) 8, 1224
Eam1105I GACNNNNNGTC 1 cut(s) 1156
EarI CTCTTC 2 cut(s) 8, 1224
EclXI CGGCCG 1 cut(s) 260
Eco130I CCWWGG 3 cut(s) 52, 457, 512
Eco147I AGGCCT 1 cut(s) 1215
Eco24I GRGCYC 1 cut(s) 478
Eco47I GGWCC 3 cut(s) 214, 454, 468
Eco52I CGGCCG 1 cut(s) 260
Eco57I CTGAAG 3 cut(s) 114, 1476, 1746
Eco72I CACGTG 1 cut(s) 956
Eco91I GGTNACC 2 cut(s) 564, 1385
EcoNI CCTNNNNNAGG 1 cut(s) 1177
EcoO109I RGGNCCY 1 cut(s) 214
EcoO65I GGTNACC 2 cut(s) 564, 1385
EcoRII CCWGG 2 cut(s) 1421, 1647
EcoT14I CCWWGG 3 cut(s) 52, 457, 512
EcoT22I ATGCAT 1 cut(s) 748
EcoT38I GRGCYC 1 cut(s) 478
EgeI GGCGCC 1 cut(s) 58
EheI GGCGCC 1 cut(s) 58
ErhI CCWWGG 3 cut(s) 52, 457, 512
Esp3I CGTCTC 1 cut(s) 1226
FaqI GGGAC 3 cut(s) 467, 788, 1095
FauI CCCGC 1 cut(s) 1628
FbaI TGATCA 1 cut(s) 676
FblI GTMKAC 1 cut(s) 1339
Fnu4HI GCNGC 2 cut(s) 76, 263
FokI GGATG 4 cut(s) 755, 837, 1021, 1068
FriOI GRGCYC 1 cut(s) 478
Fsp4HI GCNGC 2 cut(s) 76, 263
FspBI CTAG 3 cut(s) 900, 1086, 1271
GlaI GCGC 2 cut(s) 58, 425
GluI GCNGC 2 cut(s) 76, 263
GsaI CCCAGC 1 cut(s) 1193
GsuI CTGGAG 3 cut(s) 434, 440, 1728
HaeII RGCGCY 1 cut(s) 60
HaeIII GGCC 3 cut(s) 27, 262, 1215
HapII CCGG 4 cut(s) 259, 266, 272, 404
HhaI GCGC 2 cut(s) 59, 426
Hin1I GRCGYC 2 cut(s) 57, 312
Hin6I GCGC 2 cut(s) 57, 424
HinP1I GCGC 2 cut(s) 57, 424
HpaII CCGG 4 cut(s) 259, 266, 272, 404
HphI GGTGA 7 cut(s) 40, 320, 367, 608, 671, 907, 1397
Hpy166II GTNNAC 3 cut(s) 345, 887, 1340
Hpy188I TCNGA 6 cut(s) 94, 208, 821, 910, 1147, 1450
Hpy188III TCNNGA 3 cut(s) 413, 536, 854
Hpy8I GTNNAC 3 cut(s) 345, 887, 1340
Hpy99I CGWCG 3 cut(s) 68, 314, 317
HpyAV CCTTC 6 cut(s) 89, 329, 832, 1323, 1327, 1498
HpyCH4III ACNGT 1 cut(s) 247
HpyCH4IV ACGT 4 cut(s) 63, 312, 955, 1324
HpyF10VI GCNNNNNNNGC 3 cut(s) 24, 259, 281
HpyF3I CTNAG 5 cut(s) 121, 142, 924, 1077, 1557
HpySE526I ACGT 4 cut(s) 63, 312, 955, 1324
Hsp92I GRCGYC 2 cut(s) 57, 312
HspAI GCGC 2 cut(s) 57, 424
KasI GGCGCC 1 cut(s) 56
KroI GCCGGC 1 cut(s) 265
KroNI GCCGGC 1 cut(s) 267
Ksp22I TGATCA 1 cut(s) 676
Kzo9I GATC 4 cut(s) 497, 544, 676, 1582
LguI GCTCTTC 1 cut(s) 8
LmnI GCTCC 4 cut(s) 7, 274, 415, 421
Lsp1109I GCAGC 1 cut(s) 87
LweI GCATC 4 cut(s) 310, 733, 1090, 1711
MaeI CTAG 3 cut(s) 900, 1086, 1271
MaeII ACGT 4 cut(s) 63, 312, 955, 1324
MaeIII GTNAC 9 cut(s) 438, 564, 596, 729, 811, 895, 1038, 1385, 1560
MalI GATC 4 cut(s) 499, 546, 678, 1584
MboI GATC 4 cut(s) 497, 544, 676, 1582
MboII GAAGA 8 cut(s) 25, 549, 1024, 1151, 1160, 1241, 1415, 1538
MfeI CAATTG 1 cut(s) 1461
MhlI GDGCHC 2 cut(s) 240, 478
MlsI TGGCCA 1 cut(s) 27
MluNI TGGCCA 1 cut(s) 27
Mly113I GGCGCC 1 cut(s) 57
MlyI GAGTC 3 cut(s) 190, 593, 1030
MmeI TCCRAC 2 cut(s) 195, 231
Mox20I TGGCCA 1 cut(s) 27
Mph1103I ATGCAT 1 cut(s) 748
MroNI GCCGGC 1 cut(s) 265
MroXI GAANNNNTTC 1 cut(s) 1673
MscI TGGCCA 1 cut(s) 27
MseI TTAA 6 cut(s) 393, 660, 860, 1106, 1130, 1512
MslI CAYNNNNRTG 3 cut(s) 245, 954, 1521
Msp20I TGGCCA 1 cut(s) 27
MspI CCGG 4 cut(s) 259, 266, 272, 404
MspR9I CCNGG 2 cut(s) 1423, 1649
MunI CAATTG 1 cut(s) 1461
Mva1269I GAATGC 1 cut(s) 746
MvaI CCWGG 2 cut(s) 1423, 1649
MwoI GCNNNNNNNGC 3 cut(s) 24, 259, 281
NaeI GCCGGC 1 cut(s) 267
NarI GGCGCC 1 cut(s) 57
NcoI CCATGG 2 cut(s) 457, 512
NdeII GATC 4 cut(s) 497, 544, 676, 1582
NgoMIV GCCGGC 1 cut(s) 265
NlaIV GGNNCC 7 cut(s) 58, 107, 216, 270, 455, 866, 1640
NmuCI GTSAC 6 cut(s) 438, 596, 729, 811, 895, 1385
NsiI ATGCAT 1 cut(s) 748
NspI RCATGY 3 cut(s) 953, 1358, 1478
OliI CACNNNNGTG 1 cut(s) 245
PaeI GCATGC 1 cut(s) 1478
PceI AGGCCT 1 cut(s) 1215
PciSI GCTCTTC 1 cut(s) 8
PctI GAATGC 1 cut(s) 746
PdiI GCCGGC 1 cut(s) 267
PdmI GAANNNNTTC 1 cut(s) 1673
PfeI GAWTC 8 cut(s) 184, 532, 685, 822, 905, 1094, 1142, 1430
PflMI CCANNNNNTGG 1 cut(s) 1648
PkrI GCNGC 2 cut(s) 77, 264
PleI GAGTC 3 cut(s) 190, 593, 1029
PluTI GGCGCC 1 cut(s) 60
PmaCI CACGTG 1 cut(s) 956
PmlI CACGTG 1 cut(s) 956
PpsI GAGTC 3 cut(s) 190, 593, 1029
Ppu21I YACGTR 1 cut(s) 956
PpuMI RGGWCCY 1 cut(s) 214
PshAI GACNNNNGTC 1 cut(s) 200
Psp5II RGGWCCY 1 cut(s) 214
Psp6I CCWGG 2 cut(s) 1421, 1647
PspCI CACGTG 1 cut(s) 956
PspEI GGTNACC 2 cut(s) 564, 1385
PspFI CCCAGC 1 cut(s) 1189
PspGI CCWGG 2 cut(s) 1421, 1647
PspN4I GGNNCC 7 cut(s) 58, 107, 216, 270, 455, 866, 1640
PspPI GGNCC 3 cut(s) 214, 454, 468
PspPPI RGGWCCY 1 cut(s) 214
PstNI CAGNNNCTG 1 cut(s) 1454
RsaI GTAC 2 cut(s) 191, 939
RsaNI GTAC 2 cut(s) 190, 938
RseI CAYNNNNRTG 3 cut(s) 245, 954, 1521
SapI GCTCTTC 1 cut(s) 8
SaqAI TTAA 6 cut(s) 393, 660, 860, 1106, 1130, 1512
SatI GCNGC 2 cut(s) 76, 263
Sau3AI GATC 4 cut(s) 497, 544, 676, 1582
Sau96I GGNCC 3 cut(s) 214, 454, 468
SchI GAGTC 3 cut(s) 190, 593, 1030
ScrFI CCNGG 2 cut(s) 1423, 1649
SduI GDGCHC 2 cut(s) 240, 478
SfaNI GCATC 4 cut(s) 310, 733, 1090, 1711
SfcI CTRYAG 1 cut(s) 975
SfoI GGCGCC 1 cut(s) 58
SinI GGWCC 3 cut(s) 214, 454, 468
SmiMI CAYNNNNRTG 3 cut(s) 245, 954, 1521
SphI GCATGC 1 cut(s) 1478
SseBI AGGCCT 1 cut(s) 1215
SsiI CCGC 4 cut(s) 263, 284, 401, 1635
SspDI GGCGCC 1 cut(s) 56
SspMI CTAG 3 cut(s) 900, 1086, 1271
StuI AGGCCT 1 cut(s) 1215
StyD4I CCNGG 2 cut(s) 1421, 1647
StyI CCWWGG 3 cut(s) 52, 457, 512
TaaI ACNGT 1 cut(s) 247
TaiI ACGT 4 cut(s) 66, 315, 958, 1327
TaqI TCGA 4 cut(s) 66, 234, 688, 1585
TatI WGTACW 2 cut(s) 189, 937
TauI GCSGC 1 cut(s) 265
TfiI GAWTC 8 cut(s) 184, 532, 685, 822, 905, 1094, 1142, 1430
Tru1I TTAA 6 cut(s) 393, 660, 860, 1106, 1130, 1512
Tru9I TTAA 6 cut(s) 393, 660, 860, 1106, 1130, 1512
TscAI CASTG 1 cut(s) 1546
TseFI GTSAC 6 cut(s) 438, 596, 729, 811, 895, 1385
TseI GCWGC 1 cut(s) 75
Tsp45I GTSAC 6 cut(s) 438, 596, 729, 811, 895, 1385
TspDTI ATGAA 7 cut(s) 905, 1025, 1242, 1422, 1476, 1539, 1616
TspGWI ACGGA 1 cut(s) 1716
TspRI CASTG 1 cut(s) 1546
Van91I CCANNNNNTGG 1 cut(s) 1648
VpaK11BI GGWCC 3 cut(s) 214, 454, 468
XagI CCTNNNNNAGG 1 cut(s) 1177
XapI RAATTY 3 cut(s) 911, 960, 1483
XceI RCATGY 3 cut(s) 953, 1358, 1478
XcmI CCANNNNNNNNNTGG 1 cut(s) 35
XmiI GTMKAC 1 cut(s) 1339
XmnI GAANNNNTTC 1 cut(s) 1673
XspI CTAG 3 cut(s) 900, 1086, 1271
ZraI GACGTC 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.