AT3G04120

Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000502
Physical Location & Seq
Forward (+)
1080942 .. 1083690
2749 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G04120.1

Sequence Viewer

Length: 1017 bp
ATGGCTGACAAGAAGATTAGGATCGGAATCAACGGATTCGGAAGAATTGGTCGTTTGGTTGCTAGAGTTGTTCTCCAGAGGGACGATGTTGAGCTCGTCGCTGTCAACGACCCCTTCATCACTACTGAGTACATGACCTACATGTTCAAGTACGACAGTGTTCACGGTCAATGGAAACACAATGAACTCAAGATCAAGGATGAGAAGACCCTTCTCTTCGGTGAGAAGCCAGTCACTGTTTTCGGCATCAGGAACCCTGAGGATATCCCATGGGCCGAGGCTGGAGCTGACTACGTTGTTGAGTCTACTGGTGTCTTCACTGACAAAGACAAGGCTGCAGCTCACTTGAAGGGTGGTGCCAAGAAGGTTGTTATCTCTGCCCCCAGCAAAGACGCTCCAATGTTTGTTGTTGGTGTCAACGAGCACGAATACAAGTCCGACCTTGACATTGTCTCCAACGCTAGCTGCACCACTAACTGCCTTGCTCCCCTTGCCAAGGTTATCAATGACAGATTTGGAATTGTTGAGGGTCTTATGACTACAGTCCACTCAATCACTGCTACTCAGAAGACTGTTGATGGGCCTTCAATGAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTCAACATTATTCCCAGCAGCACTGGAGCTGCCAAGGCTGTCGGAAAGGTGCTTCCAGCTCTTAACGGAAAGTTGACTGGAATGTCTTTCCGTGTCCCAACCGTTGATGTCTCAGTTGTTGACCTTACTGTCAGACTCGAGAAAGCTGCTACCTACGATGAAATCAAAAAGGCTATCAAGGAGGAATCCGAAGGCAAACTCAAGGGAATCCTTGGATACACCGAGGATGATGTTGTCTCAACTGACTTCGTTGGCGACAACAGGTCGAGCATTTTTGACGCCAAGGCTGGAATTGCATTGAGCGACAAGTTTGTGAAATTGGTGTCATGGTACGACAACGAATGGGGTTACAGTTCCCGTGTGGTCGACTTGATCGTCCACATGTCAAAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0003006 GO:0003674 GO:0003824 GO:0004365 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005886 GO:0005911 GO:0005975 GO:0005996 GO:0006006 GO:0006082 GO:0006090 GO:0006091 GO:0006094 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0008886 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009651 GO:0009743 GO:0009744 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0016020 GO:0016051 GO:0016052 GO:0016053 GO:0016310 GO:0016491 GO:0016620 GO:0016903 GO:0017144 GO:0018130 GO:0019318 GO:0019319 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0022414 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032787 GO:0034285 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042493 GO:0042542 GO:0042579 GO:0042742 GO:0042866 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043891 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046364 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046677 GO:0046686 GO:0046700 GO:0046872 GO:0046914 GO:0046939 GO:0048046 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051188 GO:0051704 GO:0051707 GO:0051775 GO:0055044 GO:0055086 GO:0055114 GO:0061458 GO:0070013 GO:0071704 GO:0071944 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:0098542 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04066 ko05010 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230 map04066 map05010
Pfam Domains
Protein Families
Gp_dh_C Gp_dh_N

Protein Analysis

338

Amino Acids

36.91

Weight (kDa)

6.62

Isoelectric Point (pI)

22.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gp_dh_N PF00044 6 - 109 1.1e-34 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Gp_dh_C PF02800 161 - 318 5.9e-71 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000502)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13440 AT1G13440 AT3G04120
fragaria_vesca FvH4_4g24420 FvH4_5g07640 FvH4_6g52741 FvH4_6g52755
malus_domestica MD06G1148800.v1.1 MD09G1016900.v1.1 MD13G1111500.v1.1 MD16G1111100.v1.1 MD17G1017300.v1.1
prunus_persica Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.3G300600_v2.0.a1 Prupe.5G155800_v2.0.a1 Prupe.5G155800_v2.0.a1
pyrus_communis pycom06g13820 pycom111g01370 pycom13g09680 pycom16g09410
rosa_chinensis RchiOBHm_Chr1g0380411 RchiOBHm_Chr2g0174371 RchiOBHm_Chr2g0174391 RchiOBHm_Chr2g0174401 RchiOBHm_Chr4g0431271 RchiOBHm_Chr7g0190831 RchiOBHm_Chr7g0209601
rosa_laevigata RLG00000003113 RLG00000004459 RLG00000004490 RLG00000022261 RLG00000022262 RLG00000026305
rosa_multiflora Rmu_sc0000033.1_g000020 Rmu_sc0000243.1_g000023 Rmu_sc0002637.1_g000006 Rmu_sc0002637.1_g000007 Rmu_sc0004033.1_g000020 Rmu_sc0004787.1_g000001 Rmu_sc0005371.1_g000004 Rmu_sc0007885.1_g000015 Rmu_sc0019128.1_g000001
rosa_roxburghii Rroxscaffold_2G00078250 Rroxscaffold_2G00078260 Rroxscaffold_3G00249220 Rroxscaffold_3G00264260 Rroxscaffold_4G00279410 Rroxscaffold_5G00372820
rosa_rugosa Rorug01G0420800 Rorug04G0249800 Rorug04G0249900 Rorug06G0507500 Rorug07G0114500.1
rosa_samantha Rh1AG445000 Rh1BG400200 Rh1CG414800 Rh1DG430100 Rh2AG657500 Rh2AG657600 Rh2BG668500 Rh2BG668600 Rh2BG668700 Rh2CG631600 Rh2DG682100 Rh4AG305700 Rh4BG313100 Rh4CG329300 Rh4DG309500 Rh5AG149300 Rh5DG147700 Rh7AG114100 Rh7AG248500 Rh7BG116700 Rh7BG242600 Rh7CG119400 Rh7CG264500 Rh7DG117900 Rh7DG254400
rosa_wichuraiana Rw1G038730 Rw2G053850 Rw2G053860 Rw4G026580 Rw5G013240 Rw7G021060 Rw7G021070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 703, 749, 995
AccB1I GGYRCC 1 cut(s) 356
AccI GTMKAC 2 cut(s) 305, 987
AclWI GGATC 1 cut(s) 29
AcyI GRCGYC 1 cut(s) 900
AfaI GTAC 3 cut(s) 131, 152, 953
AfiI CCNNNNNNNGG 1 cut(s) 496
AflIII ACRYGT 2 cut(s) 141, 1002
AgsI TTSAA 4 cut(s) 148, 349, 588, 625
AhdI GACNNNNNGTC 1 cut(s) 883
AluBI AGCT 8 cut(s) 94, 287, 341, 465, 614, 650, 680, 767
AluI AGCT 8 cut(s) 94, 287, 341, 465, 614, 650, 680, 767
Alw21I GWGCWC 2 cut(s) 96, 426
Alw26I GTCTC 3 cut(s) 457, 736, 862
AlwI GGATC 1 cut(s) 29
AlwNI CAGNNNCTG 1 cut(s) 236
Ama87I CYCGRG 1 cut(s) 758
AoxI GGCC 3 cut(s) 273, 581, 1011
ApeKI GCWGC 7 cut(s) 335, 338, 465, 614, 639, 650, 767
AspS9I GGNCC 2 cut(s) 273, 581
AsuHPI GGTGA 1 cut(s) 233
AsuNHI GCTAGC 1 cut(s) 461
AvaI CYCGRG 1 cut(s) 758
AxyI CCTNAGG 1 cut(s) 258
BanI GGYRCC 1 cut(s) 356
BanII GRGCYC 1 cut(s) 96
BbsI GAAGAC 3 cut(s) 212, 307, 575
Bbv12I GWGCWC 2 cut(s) 96, 426
BbvI GCAGC 7 cut(s) 322, 350, 452, 601, 637, 651, 754
BccI CCATC 1 cut(s) 572
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciVI GTATCC 1 cut(s) 830
BcoDI GTCTC 3 cut(s) 457, 736, 862
BfaI CTAG 2 cut(s) 63, 462
BfmI CTRYAG 2 cut(s) 336, 540
BfuI GTATCC 1 cut(s) 830
BisI GCNGC 7 cut(s) 336, 339, 466, 615, 640, 651, 768
BlsI GCNGC 7 cut(s) 337, 340, 467, 616, 641, 652, 769
BmeRI GACNNNNNGTC 1 cut(s) 883
BmeT110I CYCGRG 1 cut(s) 758
BmgT120I GGNCC 2 cut(s) 273, 581
BmiI GGNNCC 2 cut(s) 254, 358
BmsI GCATC 1 cut(s) 255
BmtI GCTAGC 1 cut(s) 465
BoxI GACNNNNGTC 1 cut(s) 542
BpiI GAAGAC 3 cut(s) 212, 307, 575
BplI GAGNNNNNCTC 2 cut(s) 57, 89
BpmI CTGGAG 4 cut(s) 59, 303, 619, 666
BpuEI CTTGAG 2 cut(s) 173, 806
BsaBI GATNNNNATC 2 cut(s) 20, 26
BsaHI GRCGYC 1 cut(s) 900
BsaJI CCNNGG 7 cut(s) 269, 276, 495, 654, 832, 843, 903
BsaXI ACNNNNNCTCC 2 cut(s) 437, 467
Bsc4I CCNNNNNNNGG 1 cut(s) 496
Bse1I ACTGG 5 cut(s) 230, 313, 602, 649, 703
Bse21I CCTNAGG 1 cut(s) 258
Bse8I GATNNNNATC 2 cut(s) 20, 26
BseDI CCNNGG 7 cut(s) 269, 276, 495, 654, 832, 843, 903
BseGI GGATG 2 cut(s) 205, 853
BseJI GATNNNNATC 2 cut(s) 20, 26
BseLI CCNNNNNNNGG 1 cut(s) 496
BseMII CTCAG 4 cut(s) 117, 249, 578, 747
BseNI ACTGG 5 cut(s) 230, 313, 602, 649, 703
BseXI GCAGC 7 cut(s) 322, 350, 452, 601, 637, 651, 754
BseYI CCCAGC 2 cut(s) 383, 635
BsgI GTGCAG 1 cut(s) 451
BshFI GGCC 3 cut(s) 275, 583, 1013
BshNI GGYRCC 1 cut(s) 356
BsiHKAI GWGCWC 2 cut(s) 96, 426
BsiHKCI CYCGRG 1 cut(s) 758
BslFI GGGAC 2 cut(s) 95, 701
BslI CCNNNNNNNGG 1 cut(s) 496
BsmAI GTCTC 3 cut(s) 457, 736, 862
BsmFI GGGAC 2 cut(s) 95, 701
BsnI GGCC 3 cut(s) 275, 583, 1013
BsoBI CYCGRG 1 cut(s) 758
Bsp1286I GDGCHC 2 cut(s) 96, 426
Bsp143I GATC 3 cut(s) 21, 192, 993
Bsp19I CCATGG 1 cut(s) 269
BspANI GGCC 3 cut(s) 275, 583, 1013
BspCNI CTCAG 4 cut(s) 118, 250, 577, 746
BspLI GGNNCC 2 cut(s) 254, 358
BspMAI CTGCAG 1 cut(s) 340
BspOI GCTAGC 1 cut(s) 465
BspPI GGATC 1 cut(s) 29
BspQI GCTCTTC 1 cut(s) 604
BspT107I GGYRCC 1 cut(s) 356
BsrI ACTGG 5 cut(s) 230, 313, 602, 649, 703
BssECI CCNNGG 7 cut(s) 269, 276, 495, 654, 832, 843, 903
BssMI GATC 3 cut(s) 21, 192, 993
BssNI GRCGYC 1 cut(s) 900
BssT1I CCWWGG 5 cut(s) 269, 495, 654, 832, 903
Bst4CI ACNGT 8 cut(s) 158, 167, 238, 544, 574, 724, 751, 974
Bst6I CTCTTC 2 cut(s) 221, 604
BstACI GRCGYC 1 cut(s) 900
BstC8I GCNNGC 1 cut(s) 463
BstDEI CTNAG 4 cut(s) 126, 258, 564, 733
BstDSI CCRYGG 1 cut(s) 269
BstENI CCTNNNNNAGG 1 cut(s) 494
BstF5I GGATG 2 cut(s) 205, 853
BstKTI GATC 3 cut(s) 24, 195, 996
BstMAI GTCTC 3 cut(s) 457, 736, 862
BstMBI GATC 3 cut(s) 21, 192, 993
BstMWI GCNNNNNNNGC 3 cut(s) 491, 656, 914
BstNSI RCATGY 2 cut(s) 145, 1006
BstPAI GACNNNNGTC 1 cut(s) 542
BstSFI CTRYAG 2 cut(s) 336, 540
BstV1I GCAGC 7 cut(s) 322, 350, 452, 601, 637, 651, 754
BstV2I GAAGAC 3 cut(s) 212, 307, 575
Bsu36I CCTNAGG 1 cut(s) 258
BsuI GTATCC 1 cut(s) 830
BsuRI GGCC 3 cut(s) 275, 583, 1013
BtgI CCRYGG 1 cut(s) 269
BtsCI GGATG 2 cut(s) 205, 853
BtsI GCAGTG 1 cut(s) 555
BtsIMutI CAGTG 5 cut(s) 163, 234, 318, 555, 642
Cac8I GCNNGC 1 cut(s) 463
CaiI CAGNNNCTG 1 cut(s) 236
Cfr13I GGNCC 2 cut(s) 273, 581
CseI GACGC 2 cut(s) 401, 908
Csp6I GTAC 3 cut(s) 130, 151, 952
CviAII CATG 5 cut(s) 133, 142, 270, 948, 1003
CviQI GTAC 3 cut(s) 130, 151, 952
DdeI CTNAG 4 cut(s) 126, 258, 564, 733
DpnI GATC 3 cut(s) 23, 194, 995
DpnII GATC 3 cut(s) 21, 192, 993
DrdI GACNNNNNNGTC 3 cut(s) 703, 749, 995
DriI GACNNNNNGTC 1 cut(s) 883
DseDI GACNNNNNNGTC 3 cut(s) 703, 749, 995
Eam1104I CTCTTC 2 cut(s) 221, 604
Eam1105I GACNNNNNGTC 1 cut(s) 883
EarI CTCTTC 2 cut(s) 221, 604
Ecl136II GAGCTC 1 cut(s) 94
Eco130I CCWWGG 5 cut(s) 269, 495, 654, 832, 903
Eco147I AGGCCT 1 cut(s) 1013
Eco24I GRGCYC 1 cut(s) 96
Eco32I GATATC 1 cut(s) 265
Eco53kI GAGCTC 1 cut(s) 94
Eco81I CCTNAGG 1 cut(s) 258
Eco88I CYCGRG 1 cut(s) 758
EcoICRI GAGCTC 1 cut(s) 94
EcoNI CCTNNNNNAGG 1 cut(s) 494
EcoRV GATATC 1 cut(s) 265
EcoT14I CCWWGG 5 cut(s) 269, 495, 654, 832, 903
EcoT38I GRGCYC 1 cut(s) 96
ErhI CCWWGG 5 cut(s) 269, 495, 654, 832, 903
FaeI CATG 5 cut(s) 136, 145, 273, 951, 1006
FaiI YATR 6 cut(s) 134, 143, 271, 536, 949, 1004
FalI AAGNNNNNCTT 2 cut(s) 601, 633
FaqI GGGAC 2 cut(s) 95, 701
FatI CATG 5 cut(s) 132, 141, 269, 947, 1002
FblI GTMKAC 2 cut(s) 305, 987
Fnu4HI GCNGC 7 cut(s) 336, 339, 466, 615, 640, 651, 768
FokI GGATG 2 cut(s) 212, 860
FriOI GRGCYC 1 cut(s) 96
Fsp4HI GCNGC 7 cut(s) 336, 339, 466, 615, 640, 651, 768
FspBI CTAG 2 cut(s) 63, 462
GluI GCNGC 7 cut(s) 336, 339, 466, 615, 640, 651, 768
GsaI CCCAGC 2 cut(s) 387, 639
GsuI CTGGAG 4 cut(s) 59, 303, 619, 666
HaeIII GGCC 3 cut(s) 275, 583, 1013
HgaI GACGC 2 cut(s) 401, 908
Hin1I GRCGYC 1 cut(s) 900
Hin1II CATG 5 cut(s) 136, 145, 273, 951, 1006
HincII GTYRAC 5 cut(s) 106, 418, 696, 742, 988
HindII GTYRAC 5 cut(s) 106, 418, 696, 742, 988
HinfI GANTC 6 cut(s) 27, 36, 302, 756, 806, 828
HphI GGTGA 1 cut(s) 233
Hpy166II GTNNAC 9 cut(s) 106, 163, 306, 418, 547, 696, 742, 988, 1000
Hpy188I TCNGA 7 cut(s) 26, 41, 439, 567, 665, 755, 811
Hpy188III TCNNGA 4 cut(s) 76, 190, 250, 760
Hpy8I GTNNAC 9 cut(s) 106, 163, 306, 418, 547, 696, 742, 988, 1000
Hpy99I CGWCG 1 cut(s) 101
HpyAV CCTTC 7 cut(s) 124, 221, 343, 358, 586, 594, 806
HpyCH4III ACNGT 8 cut(s) 158, 167, 238, 544, 574, 724, 751, 974
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 3 cut(s) 338, 468, 917
HpyF10VI GCNNNNNNNGC 3 cut(s) 491, 656, 914
HpyF3I CTNAG 4 cut(s) 126, 258, 564, 733
HpySE526I ACGT 1 cut(s) 294
Hsp92I GRCGYC 1 cut(s) 900
Hsp92II CATG 5 cut(s) 136, 145, 273, 951, 1006
Kzo9I GATC 3 cut(s) 21, 192, 993
LguI GCTCTTC 1 cut(s) 604
LmnI GCTCC 4 cut(s) 284, 400, 490, 647
Lsp1109I GCAGC 7 cut(s) 322, 350, 452, 601, 637, 651, 754
LweI GCATC 1 cut(s) 255
MaeI CTAG 2 cut(s) 63, 462
MaeII ACGT 1 cut(s) 294
MaeIII GTNAC 2 cut(s) 232, 968
MalI GATC 3 cut(s) 23, 194, 995
MboI GATC 3 cut(s) 21, 192, 993
MboII GAAGA 7 cut(s) 25, 54, 208, 217, 307, 580, 621
MhlI GDGCHC 2 cut(s) 96, 426
MluCI AATT 4 cut(s) 45, 519, 912, 938
MlyI GAGTC 2 cut(s) 311, 750
MmeI TCCRAC 3 cut(s) 462, 480, 643
MnlI CCTC 7 cut(s) 72, 253, 271, 520, 596, 796, 838
MseI TTAA 1 cut(s) 684
MwoI GCNNNNNNNGC 3 cut(s) 491, 656, 914
NcoI CCATGG 1 cut(s) 269
NdeII GATC 3 cut(s) 21, 192, 993
NheI GCTAGC 1 cut(s) 461
NlaIII CATG 5 cut(s) 136, 145, 273, 951, 1006
NlaIV GGNNCC 2 cut(s) 254, 358
NmeAIII GCCGAG 1 cut(s) 301
NmuCI GTSAC 1 cut(s) 232
NspI RCATGY 2 cut(s) 145, 1006
PaeR7I CTCGAG 1 cut(s) 758
PceI AGGCCT 1 cut(s) 1013
PciI ACATGT 2 cut(s) 141, 1002
PciSI GCTCTTC 1 cut(s) 604
PcsI WCGNNNNNNNCGW 2 cut(s) 105, 993
PfeI GAWTC 4 cut(s) 27, 36, 806, 828
PflFI GACNNNGTC 1 cut(s) 449
PkrI GCNGC 7 cut(s) 337, 340, 467, 616, 641, 652, 769
PleI GAGTC 2 cut(s) 310, 750
PpsI GAGTC 2 cut(s) 310, 750
PscI ACATGT 2 cut(s) 141, 1002
PshAI GACNNNNGTC 1 cut(s) 542
Psp124BI GAGCTC 1 cut(s) 96
PspFI CCCAGC 2 cut(s) 383, 635
PspN4I GGNNCC 2 cut(s) 254, 358
PspPI GGNCC 2 cut(s) 273, 581
PstI CTGCAG 1 cut(s) 340
PstNI CAGNNNCTG 1 cut(s) 236
PsyI GACNNNGTC 1 cut(s) 449
RsaI GTAC 3 cut(s) 131, 152, 953
RsaNI GTAC 3 cut(s) 130, 151, 952
SacI GAGCTC 1 cut(s) 96
SalI GTCGAC 1 cut(s) 986
SapI GCTCTTC 1 cut(s) 604
SaqAI TTAA 1 cut(s) 684
SatI GCNGC 7 cut(s) 336, 339, 466, 615, 640, 651, 768
Sau3AI GATC 3 cut(s) 21, 192, 993
Sau96I GGNCC 2 cut(s) 273, 581
SchI GAGTC 2 cut(s) 311, 750
SduI GDGCHC 2 cut(s) 96, 426
SfaNI GCATC 1 cut(s) 255
SfcI CTRYAG 2 cut(s) 336, 540
Sfr274I CTCGAG 1 cut(s) 758
SlaI CTCGAG 1 cut(s) 758
SmlI CTYRAG 3 cut(s) 188, 758, 821
SmoI CTYRAG 3 cut(s) 188, 758, 821
Sse9I AATT 4 cut(s) 45, 519, 912, 938
SseBI AGGCCT 1 cut(s) 1013
SspMI CTAG 2 cut(s) 63, 462
SstI GAGCTC 1 cut(s) 96
StuI AGGCCT 1 cut(s) 1013
StyI CCWWGG 5 cut(s) 269, 495, 654, 832, 903
TaaI ACNGT 8 cut(s) 158, 167, 238, 544, 574, 724, 751, 974
TaiI ACGT 1 cut(s) 297
TaqI TCGA 3 cut(s) 759, 887, 987
TasI AATT 4 cut(s) 45, 519, 912, 938
TatI WGTACW 1 cut(s) 129
TfiI GAWTC 4 cut(s) 27, 36, 806, 828
Tru1I TTAA 1 cut(s) 684
Tru9I TTAA 1 cut(s) 684
TscAI CASTG 5 cut(s) 163, 241, 325, 562, 649
TseFI GTSAC 1 cut(s) 232
TseI GCWGC 7 cut(s) 335, 338, 465, 614, 639, 650, 767
Tsp45I GTSAC 1 cut(s) 232
TspDTI ATGAA 5 cut(s) 106, 198, 605, 609, 795
TspGWI ACGGA 3 cut(s) 48, 701, 702
TspRI CASTG 5 cut(s) 163, 241, 325, 562, 649
Tth111I GACNNNGTC 1 cut(s) 449
XagI CCTNNNNNAGG 1 cut(s) 494
XceI RCATGY 2 cut(s) 145, 1006
XhoI CTCGAG 1 cut(s) 758
XmiI GTMKAC 2 cut(s) 305, 987
XspI CTAG 2 cut(s) 63, 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.