Rroxscaffold_3G00249220

Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000502
Physical Location & Seq
Forward (+)
42835837 .. 42838505
2669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00249220.1

Sequence Viewer

Length: 864 bp
ATGGCCAAGATCAAGATCGGAATCAACGGTTTCGGAAGGATCGGGCGTTTGGTTGCTAGGGTCGCTCTTCAGAGGGACGATGTTGAGCTCGTCGCTGTTAACGATCCATTCATCACCACCGACTACATGACGTACATGTTCAAGTATGACACTGTCCATGGACCATGGAAGCACCATGAGCTTAAGGTCAAGGACGAAAAGACCCTTCTCTTCGGTGAGAAGGCTGTCACTGTTTTCGGGATCAGGAACCCAGAAGAGATCCCATGGGGTGAGGCTGGTGCCGATATTGTTGTTGAGTCTACTGGAGTGTTCACTGACAAGGACAAAGCCGCGACTCACTTGAAGGTTATCAATGACAGATTCGGAATTGTTGAGGGTCTTATGACCACTGTTCACTCCATCACAGCCACACAGAAAACTGTTGATGGCCCATCAAGTAAGGACTGGAGAGGCGGACGTGCTGCTTCATTCAACATCATTCCTAGCAGCACTGGAGCTGCCAAGGCTGTTGGAAAAGTTCTACCAGCTCTCAATGGCAAATTGACTGGAATGGCCTTCCGTGTTCCCACTGTTGATGTTTCAGTTGTTGACCTCACTGTCAGGCTTGAGAAGAAGGCCACATATGACCAGATTAAGGCTGCTATCAAGGAGGAGTCCGAGGGAAAGCTCAAGGGCATCTTGGGTTACACCGAGGACGATGTTGTGTCAACTGACTTCATCGGTGACAACAGATCAAGCATCTTCGATGCCAAGGCTGGAATTGCATTGAATGACAACTTTGTCAAACTTGTGTCCTGGTATGACAACGAGTGGGGTTACAGTTCCCGAGTGATTGACTTGATTGTGCACATTGCAACTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0003006 GO:0003674 GO:0003824 GO:0004365 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005886 GO:0005911 GO:0005975 GO:0005996 GO:0006006 GO:0006082 GO:0006090 GO:0006091 GO:0006094 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0008886 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009651 GO:0009743 GO:0009744 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0016020 GO:0016051 GO:0016052 GO:0016053 GO:0016310 GO:0016491 GO:0016620 GO:0016903 GO:0017144 GO:0018130 GO:0019318 GO:0019319 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0022414 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032787 GO:0034285 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042493 GO:0042542 GO:0042579 GO:0042742 GO:0042866 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043891 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046364 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046677 GO:0046686 GO:0046700 GO:0046872 GO:0046914 GO:0046939 GO:0048046 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051188 GO:0051704 GO:0051707 GO:0051775 GO:0055044 GO:0055086 GO:0055114 GO:0061458 GO:0070013 GO:0071704 GO:0071944 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:0098542 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04066 ko05010 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230 map04066 map05010
Pfam Domains
Protein Families
Gp_dh_C Gp_dh_N

Protein Analysis

287

Amino Acids

31.41

Weight (kDa)

6.33

Isoelectric Point (pI)

18.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gp_dh_N PF00044 4 - 107 1.1e-34 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Gp_dh_C PF02800 112 - 267 3.3e-70 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000502)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13440 AT1G13440 AT3G04120
fragaria_vesca FvH4_4g24420 FvH4_5g07640 FvH4_6g52741 FvH4_6g52755
malus_domestica MD06G1148800.v1.1 MD09G1016900.v1.1 MD13G1111500.v1.1 MD16G1111100.v1.1 MD17G1017300.v1.1
prunus_persica Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.3G300600_v2.0.a1 Prupe.5G155800_v2.0.a1 Prupe.5G155800_v2.0.a1
pyrus_communis pycom06g13820 pycom111g01370 pycom13g09680 pycom16g09410
rosa_chinensis RchiOBHm_Chr1g0380411 RchiOBHm_Chr2g0174371 RchiOBHm_Chr2g0174391 RchiOBHm_Chr2g0174401 RchiOBHm_Chr4g0431271 RchiOBHm_Chr7g0190831 RchiOBHm_Chr7g0209601
rosa_laevigata RLG00000003113 RLG00000004459 RLG00000004490 RLG00000022261 RLG00000022262 RLG00000026305
rosa_multiflora Rmu_sc0000033.1_g000020 Rmu_sc0000243.1_g000023 Rmu_sc0002637.1_g000006 Rmu_sc0002637.1_g000007 Rmu_sc0004033.1_g000020 Rmu_sc0004787.1_g000001 Rmu_sc0005371.1_g000004 Rmu_sc0007885.1_g000015 Rmu_sc0019128.1_g000001
rosa_roxburghii Rroxscaffold_2G00078250 Rroxscaffold_2G00078260 Rroxscaffold_3G00249220 Rroxscaffold_3G00264260 Rroxscaffold_4G00279410 Rroxscaffold_5G00372820
rosa_rugosa Rorug01G0420800 Rorug04G0249800 Rorug04G0249900 Rorug06G0507500 Rorug07G0114500.1
rosa_samantha Rh1AG445000 Rh1BG400200 Rh1CG414800 Rh1DG430100 Rh2AG657500 Rh2AG657600 Rh2BG668500 Rh2BG668600 Rh2BG668700 Rh2CG631600 Rh2DG682100 Rh4AG305700 Rh4BG313100 Rh4CG329300 Rh4DG309500 Rh5AG149300 Rh5DG147700 Rh7AG114100 Rh7AG248500 Rh7BG116700 Rh7BG242600 Rh7CG119400 Rh7CG264500 Rh7DG117900 Rh7DG254400
rosa_wichuraiana Rw1G038730 Rw2G053850 Rw2G053860 Rw4G026580 Rw5G013240 Rw7G021060 Rw7G021070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 596, 779
AccB1I GGYRCC 1 cut(s) 278
AccI GTMKAC 1 cut(s) 299
AccII CGCG 1 cut(s) 332
AciI CCGC 2 cut(s) 330, 453
AclWI GGATC 4 cut(s) 47, 98, 248, 253
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 53
AfaI GTAC 1 cut(s) 134
AfiI CCNNNNNNNGG 1 cut(s) 634
AflII CTTAAG 1 cut(s) 182
AflIII ACRYGT 1 cut(s) 135
AgsI TTSAA 4 cut(s) 142, 343, 472, 769
AjiI CACGTC 1 cut(s) 458
AjnI CCWGG 1 cut(s) 794
AluBI AGCT 5 cut(s) 88, 181, 497, 527, 667
AluI AGCT 5 cut(s) 88, 181, 497, 527, 667
Alw21I GWGCWC 2 cut(s) 90, 849
Alw44I GTGCAC 1 cut(s) 845
AlwI GGATC 4 cut(s) 47, 98, 248, 253
Ama87I CYCGRG 1 cut(s) 825
AoxI GGCC 4 cut(s) 3, 427, 552, 615
ApaLI GTGCAC 1 cut(s) 845
ApeKI GCWGC 4 cut(s) 461, 486, 497, 638
AspS9I GGNCC 2 cut(s) 161, 428
AsuHPI GGTGA 4 cut(s) 106, 227, 281, 734
AvaI CYCGRG 1 cut(s) 825
AvaII GGWCC 1 cut(s) 161
BaeGI GKGCMC 1 cut(s) 849
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 278
BanII GRGCYC 1 cut(s) 90
Bbv12I GWGCWC 2 cut(s) 90, 849
BbvI GCAGC 4 cut(s) 448, 484, 498, 625
BccI CCATC 3 cut(s) 407, 419, 439
BciT130I CCWGG 1 cut(s) 796
BfaI CTAG 2 cut(s) 57, 483
BfrI CTTAAG 1 cut(s) 182
BisI GCNGC 5 cut(s) 330, 462, 487, 498, 639
BlsI GCNGC 5 cut(s) 331, 463, 488, 499, 640
Bme1390I CCNGG 1 cut(s) 796
Bme18I GGWCC 1 cut(s) 161
BmeT110I CYCGRG 1 cut(s) 825
BmgBI CACGTC 1 cut(s) 458
BmgT120I GGNCC 2 cut(s) 161, 428
BmiI GGNNCC 2 cut(s) 248, 280
BmrFI CCNGG 1 cut(s) 796
BmsI GCATC 3 cut(s) 684, 736, 747
BpmI CTGGAG 3 cut(s) 324, 466, 513
BpuEI CTTGAG 2 cut(s) 626, 653
BsaBI GATNNNNATC 2 cut(s) 14, 20
BsaJI CCNNGG 7 cut(s) 157, 164, 263, 501, 657, 690, 750
Bsc4I CCNNNNNNNGG 1 cut(s) 634
Bse1I ACTGG 4 cut(s) 307, 449, 496, 550
Bse3DI GCAATG 1 cut(s) 849
Bse8I GATNNNNATC 2 cut(s) 14, 20
BseBI CCWGG 1 cut(s) 796
BseDI CCNNGG 7 cut(s) 157, 164, 263, 501, 657, 690, 750
BseJI GATNNNNATC 2 cut(s) 14, 20
BseLI CCNNNNNNNGG 1 cut(s) 634
BseMI GCAATG 1 cut(s) 849
BseNI ACTGG 4 cut(s) 307, 449, 496, 550
BseRI GAGGAG 1 cut(s) 665
BseSI GKGCMC 1 cut(s) 849
BseXI GCAGC 4 cut(s) 448, 484, 498, 625
Bsh1236I CGCG 1 cut(s) 332
BshFI GGCC 4 cut(s) 5, 429, 554, 617
BshNI GGYRCC 1 cut(s) 278
BsiHKAI GWGCWC 2 cut(s) 90, 849
BsiHKCI CYCGRG 1 cut(s) 825
BslFI GGGAC 1 cut(s) 89
BslI CCNNNNNNNGG 1 cut(s) 634
BsmFI GGGAC 1 cut(s) 89
BsnI GGCC 4 cut(s) 5, 429, 554, 617
BsoBI CYCGRG 1 cut(s) 825
Bsp1286I GDGCHC 2 cut(s) 90, 849
Bsp143I GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
Bsp19I CCATGG 3 cut(s) 157, 164, 263
BspACI CCGC 2 cut(s) 330, 453
BspANI GGCC 4 cut(s) 5, 429, 554, 617
BspFNI CGCG 1 cut(s) 332
BspLI GGNNCC 2 cut(s) 248, 280
BspPI GGATC 4 cut(s) 47, 98, 248, 253
BspQI GCTCTTC 1 cut(s) 72
BspT107I GGYRCC 1 cut(s) 278
BspTI CTTAAG 1 cut(s) 182
BsrDI GCAATG 1 cut(s) 849
BsrI ACTGG 4 cut(s) 307, 449, 496, 550
BssECI CCNNGG 7 cut(s) 157, 164, 263, 501, 657, 690, 750
BssMI GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
BssT1I CCWWGG 5 cut(s) 157, 164, 263, 501, 750
Bst2UI CCWGG 1 cut(s) 796
Bst4CI ACNGT 8 cut(s) 29, 154, 232, 391, 421, 571, 598, 821
Bst6I CTCTTC 3 cut(s) 72, 215, 249
BstAFI CTTAAG 1 cut(s) 182
BstDSI CCRYGG 3 cut(s) 157, 164, 263
BstFNI CGCG 1 cut(s) 332
BstKTI GATC 7 cut(s) 12, 18, 42, 106, 243, 261, 734
BstMBI GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
BstMWI GCNNNNNNNGC 4 cut(s) 62, 178, 503, 761
BstNI CCWGG 1 cut(s) 796
BstNSI RCATGY 1 cut(s) 139
BstSCI CCNGG 1 cut(s) 794
BstSLI GKGCMC 1 cut(s) 849
BstUI CGCG 1 cut(s) 332
BstV1I GCAGC 4 cut(s) 448, 484, 498, 625
BstX2I RGATCY 1 cut(s) 258
BstYI RGATCY 1 cut(s) 258
BsuRI GGCC 4 cut(s) 5, 429, 554, 617
BtgI CCRYGG 3 cut(s) 157, 164, 263
BtrI CACGTC 1 cut(s) 458
BtsIMutI CAGTG 7 cut(s) 150, 228, 312, 387, 489, 567, 594
Cfr13I GGNCC 2 cut(s) 161, 428
Csp6I GTAC 1 cut(s) 133
CviAII CATG 6 cut(s) 127, 136, 158, 165, 176, 264
CviQI GTAC 1 cut(s) 133
DpnI GATC 7 cut(s) 11, 17, 41, 105, 242, 260, 733
DpnII GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
DrdI GACNNNNNNGTC 2 cut(s) 596, 779
DseDI GACNNNNNNGTC 2 cut(s) 596, 779
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 72, 215, 249
EarI CTCTTC 3 cut(s) 72, 215, 249
EciI GGCGGA 1 cut(s) 468
Ecl136II GAGCTC 1 cut(s) 88
Eco130I CCWWGG 5 cut(s) 157, 164, 263, 501, 750
Eco24I GRGCYC 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 161
Eco53kI GAGCTC 1 cut(s) 88
Eco57I CTGAAG 1 cut(s) 53
Eco88I CYCGRG 1 cut(s) 825
EcoICRI GAGCTC 1 cut(s) 88
EcoRII CCWGG 1 cut(s) 794
EcoT14I CCWWGG 5 cut(s) 157, 164, 263, 501, 750
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 5 cut(s) 157, 164, 263, 501, 750
FaeI CATG 6 cut(s) 130, 139, 161, 168, 179, 267
FalI AAGNNNNNCTT 2 cut(s) 662, 694
FaqI GGGAC 1 cut(s) 89
FatI CATG 6 cut(s) 126, 135, 157, 164, 175, 263
FauNDI CATATG 1 cut(s) 622
FblI GTMKAC 1 cut(s) 299
Fnu4HI GCNGC 5 cut(s) 330, 462, 487, 498, 639
FriOI GRGCYC 1 cut(s) 90
Fsp4HI GCNGC 5 cut(s) 330, 462, 487, 498, 639
FspBI CTAG 2 cut(s) 57, 483
GluI GCNGC 5 cut(s) 330, 462, 487, 498, 639
GsuI CTGGAG 3 cut(s) 324, 466, 513
HaeIII GGCC 4 cut(s) 5, 429, 554, 617
Hin1II CATG 6 cut(s) 130, 139, 161, 168, 179, 267
HincII GTYRAC 3 cut(s) 100, 589, 708
HindII GTYRAC 3 cut(s) 100, 589, 708
HinfI GANTC 5 cut(s) 21, 296, 334, 360, 653
HpaI GTTAAC 1 cut(s) 100
HphI GGTGA 4 cut(s) 106, 227, 281, 734
Hpy166II GTNNAC 7 cut(s) 100, 300, 312, 394, 589, 708, 847
Hpy188I TCNGA 5 cut(s) 20, 35, 72, 365, 658
Hpy188III TCNNGA 4 cut(s) 13, 238, 244, 825
Hpy8I GTNNAC 7 cut(s) 100, 300, 312, 394, 589, 708, 847
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 6 cut(s) 30, 214, 215, 337, 565, 607
HpyCH4III ACNGT 8 cut(s) 29, 154, 232, 391, 421, 571, 598, 821
HpyCH4IV ACGT 2 cut(s) 131, 457
HpyCH4V TGCA 3 cut(s) 764, 847, 854
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 178, 503, 761
HpySE526I ACGT 2 cut(s) 131, 457
Hsp92II CATG 6 cut(s) 130, 139, 161, 168, 179, 267
KspAI GTTAAC 1 cut(s) 100
Kzo9I GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
LguI GCTCTTC 1 cut(s) 72
LmnI GCTCC 1 cut(s) 494
Lsp1109I GCAGC 4 cut(s) 448, 484, 498, 625
LweI GCATC 3 cut(s) 684, 736, 747
MaeI CTAG 2 cut(s) 57, 483
MaeII ACGT 2 cut(s) 131, 457
MaeIII GTNAC 4 cut(s) 226, 683, 722, 815
MalI GATC 7 cut(s) 11, 17, 41, 105, 242, 260, 733
MboI GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
MboII GAAGA 5 cut(s) 59, 202, 266, 622, 733
MflI RGATCY 1 cut(s) 258
MhlI GDGCHC 2 cut(s) 90, 849
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 366, 539, 759
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 305, 328, 662
MmeI TCCRAC 1 cut(s) 490
MnlI CCTC 8 cut(s) 66, 265, 367, 443, 602, 643, 652, 685
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 99, 183, 633, 862
Msp20I TGGCCA 1 cut(s) 5
MspCI CTTAAG 1 cut(s) 182
MspR9I CCNGG 1 cut(s) 796
MvaI CCWGG 1 cut(s) 796
MvnI CGCG 1 cut(s) 332
MwoI GCNNNNNNNGC 4 cut(s) 62, 178, 503, 761
NcoI CCATGG 3 cut(s) 157, 164, 263
NdeI CATATG 1 cut(s) 622
NdeII GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
NlaIII CATG 6 cut(s) 130, 139, 161, 168, 179, 267
NlaIV GGNNCC 2 cut(s) 248, 280
NmuCI GTSAC 2 cut(s) 226, 722
NspI RCATGY 1 cut(s) 139
PciI ACATGT 1 cut(s) 135
PciSI GCTCTTC 1 cut(s) 72
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PfeI GAWTC 2 cut(s) 21, 360
PflFI GACNNNGTC 1 cut(s) 152
PkrI GCNGC 5 cut(s) 331, 463, 488, 499, 640
PleI GAGTC 3 cut(s) 304, 328, 661
PpsI GAGTC 3 cut(s) 304, 328, 661
PscI ACATGT 1 cut(s) 135
Psp124BI GAGCTC 1 cut(s) 90
Psp6I CCWGG 1 cut(s) 794
PspGI CCWGG 1 cut(s) 794
PspN4I GGNNCC 2 cut(s) 248, 280
PspPI GGNCC 2 cut(s) 161, 428
PsuI RGATCY 1 cut(s) 258
PsyI GACNNNGTC 1 cut(s) 152
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
SacI GAGCTC 1 cut(s) 90
SapI GCTCTTC 1 cut(s) 72
SaqAI TTAA 4 cut(s) 99, 183, 633, 862
SatI GCNGC 5 cut(s) 330, 462, 487, 498, 639
Sau3AI GATC 7 cut(s) 9, 15, 39, 103, 240, 258, 731
Sau96I GGNCC 2 cut(s) 161, 428
SchI GAGTC 3 cut(s) 305, 328, 662
ScrFI CCNGG 1 cut(s) 796
SduI GDGCHC 2 cut(s) 90, 849
SfaNI GCATC 3 cut(s) 684, 736, 747
SinI GGWCC 1 cut(s) 161
SmlI CTYRAG 3 cut(s) 182, 605, 668
SmoI CTYRAG 3 cut(s) 182, 605, 668
Sse9I AATT 3 cut(s) 366, 539, 759
SsiI CCGC 2 cut(s) 330, 453
SspMI CTAG 2 cut(s) 57, 483
SstI GAGCTC 1 cut(s) 90
StyD4I CCNGG 1 cut(s) 794
StyI CCWWGG 5 cut(s) 157, 164, 263, 501, 750
TaaI ACNGT 8 cut(s) 29, 154, 232, 391, 421, 571, 598, 821
TaiI ACGT 2 cut(s) 134, 460
TaqI TCGA 1 cut(s) 744
TasI AATT 3 cut(s) 366, 539, 759
TauI GCSGC 1 cut(s) 332
TfiI GAWTC 2 cut(s) 21, 360
Tru1I TTAA 4 cut(s) 99, 183, 633, 862
Tru9I TTAA 4 cut(s) 99, 183, 633, 862
TscAI CASTG 7 cut(s) 157, 235, 319, 394, 496, 574, 601
TseFI GTSAC 2 cut(s) 226, 722
TseI GCWGC 4 cut(s) 461, 486, 497, 638
Tsp45I GTSAC 2 cut(s) 226, 722
TspDTI ATGAA 3 cut(s) 100, 456, 706
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 7 cut(s) 157, 235, 319, 394, 496, 574, 601
Tth111I GACNNNGTC 1 cut(s) 152
Vha464I CTTAAG 1 cut(s) 182
VneI GTGCAC 1 cut(s) 845
VpaK11BI GGWCC 1 cut(s) 161
XceI RCATGY 1 cut(s) 139
XmiI GTMKAC 1 cut(s) 299
XspI CTAG 2 cut(s) 57, 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.