MD06G1148800.v1.1

Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0000502
Physical Location & Seq
Reverse (-)
29143772 .. 29148059
4288 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1148800.v1.1.491

Sequence Viewer

Length: 1098 bp
ATGGAATTCAAGATCCTCCTTTTGGCAACTCTCCATATCATCTCCCATCGAGTCCCATTGGATTTTAAGCATTTCTCTAAAGGGAAGATAAAGGTCGGAATCAATGGATTTGGAAGGATCGGAAGGTTGGTCGCTAGAATTGCTCTGCAGAGAGAGGATATCGAACTCGTCGCCATTAACGACCCCTTCATCACCGGCGACTACATGGTGTACATGTTCAACTACGACACCGTCCACGGCCGCTGGAAGCATAACGATGTGAAGCTGAAGGACGCAAACACCCTTCTCTTTGGTGACAAGCCCGTCTCCATTTTTGCTGTCAGGGACCCGGTGGAGATCCCGTGGTCCGGGAGCGGGGCTGAGTACATCGTTGAGTCGACCGGTGTTTTCACCGACAAGGAAAAGGCTGCTGCCCATCTGAAGGGTGGAGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAAGATGCTCCTATGTTCGTTGTCGGTGTCAATGAGAAGGACTACATGAAAGATCTTGATATTGTTTCCAATGCTAGTTGCACGACCAACTGCCTTGCCCCCCTTGCGAAGGTTATTCATGATAGATTCGGTATTGTGGAGGGTCTGATGACCACAGTTCACTCCATTACTGCCACCCAGAAAACTGTTGATGGACCTTCTTCGAAGGATTGGAGAGGTGGAAGGGCAGCTTCATTCAACATCATTCCCAGCAGTACTGGAGCTGCAAAGGCTGTTGGTAAAGTGCTGCCAGACCTGAACGGAAAATTGACGGGAATGGCATTCCGTGTTCCTACCGTCGATGTCTCGGTGGTTGACCTTACAGTGAGGCTGGCAAAAGCAGCTACTTATGATGAAGTAAAAGCTGCTATCAAGGAGGAGTCTGAGGGGAAACTGAAGGGAATCCTGGGTTACACCGAAGATGACGTGGTCTCCACCGACTTTGTGGGCGACAGCAGGTCAAGTATTTTTGACGCAAAAGCCGGAATTGCTTTGAACGATAACTTCATCAAGTTGATCTCGTGGTATGACAACGAGTGGGGATATAGCTGCCGTGTGGTCGATCTGATTTCCTACATCGCATCTGTTGATCTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04066 ko05010 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230 map04066 map05010
Pfam Domains
Protein Families
Gp_dh_C Gp_dh_N

Protein Analysis

366

Amino Acids

39.78

Weight (kDa)

6.72

Isoelectric Point (pI)

23.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gp_dh_N PF00044 30 - 133 1.5e-32 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Gp_dh_C PF02800 185 - 342 1.4e-71 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000502)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13440 AT1G13440 AT3G04120
fragaria_vesca FvH4_4g24420 FvH4_5g07640 FvH4_6g52741 FvH4_6g52755
malus_domestica MD06G1148800.v1.1 MD09G1016900.v1.1 MD13G1111500.v1.1 MD16G1111100.v1.1 MD17G1017300.v1.1
prunus_persica Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.3G300600_v2.0.a1 Prupe.5G155800_v2.0.a1 Prupe.5G155800_v2.0.a1
pyrus_communis pycom06g13820 pycom111g01370 pycom13g09680 pycom16g09410
rosa_chinensis RchiOBHm_Chr1g0380411 RchiOBHm_Chr2g0174371 RchiOBHm_Chr2g0174391 RchiOBHm_Chr2g0174401 RchiOBHm_Chr4g0431271 RchiOBHm_Chr7g0190831 RchiOBHm_Chr7g0209601
rosa_laevigata RLG00000003113 RLG00000004459 RLG00000004490 RLG00000022261 RLG00000022262 RLG00000026305
rosa_multiflora Rmu_sc0000033.1_g000020 Rmu_sc0000243.1_g000023 Rmu_sc0002637.1_g000006 Rmu_sc0002637.1_g000007 Rmu_sc0004033.1_g000020 Rmu_sc0004787.1_g000001 Rmu_sc0005371.1_g000004 Rmu_sc0007885.1_g000015 Rmu_sc0019128.1_g000001
rosa_roxburghii Rroxscaffold_2G00078250 Rroxscaffold_2G00078260 Rroxscaffold_3G00249220 Rroxscaffold_3G00264260 Rroxscaffold_4G00279410 Rroxscaffold_5G00372820
rosa_rugosa Rorug01G0420800 Rorug04G0249800 Rorug04G0249900 Rorug06G0507500 Rorug07G0114500.1
rosa_samantha Rh1AG445000 Rh1BG400200 Rh1CG414800 Rh1DG430100 Rh2AG657500 Rh2AG657600 Rh2BG668500 Rh2BG668600 Rh2BG668700 Rh2CG631600 Rh2DG682100 Rh4AG305700 Rh4BG313100 Rh4CG329300 Rh4DG309500 Rh5AG149300 Rh5DG147700 Rh7AG114100 Rh7AG248500 Rh7BG116700 Rh7BG242600 Rh7CG119400 Rh7CG264500 Rh7DG117900 Rh7DG254400
rosa_wichuraiana Rw1G038730 Rw2G053850 Rw2G053860 Rw4G026580 Rw5G013240 Rw7G021060 Rw7G021070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 302
Acc36I ACCTGC 1 cut(s) 945
AccBSI CCGCTC 1 cut(s) 354
AccI GTMKAC 1 cut(s) 377
AciI CCGC 2 cut(s) 241, 354
AclWI GGATC 3 cut(s) 7, 125, 331
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 1 cut(s) 5
AcuI CTGAAG 3 cut(s) 287, 440, 914
AfaI GTAC 3 cut(s) 212, 365, 715
AfiI CCNNNNNNNGG 5 cut(s) 22, 347, 354, 421, 568
AflIII ACRYGT 1 cut(s) 213
AgeI ACCGGT 1 cut(s) 380
AgsI TTSAA 4 cut(s) 10, 220, 697, 994
AhdI GACNNNNNGTC 1 cut(s) 955
AjiI CACGTC 1 cut(s) 925
AjnI CCWGG 1 cut(s) 903
AluBI AGCT 7 cut(s) 265, 431, 689, 722, 842, 863, 1047
AluI AGCT 7 cut(s) 265, 431, 689, 722, 842, 863, 1047
Alw26I GTCTC 3 cut(s) 310, 808, 934
AlwI GGATC 3 cut(s) 7, 125, 331
AoxI GGCC 1 cut(s) 238
ApeKI GCWGC 8 cut(s) 407, 410, 686, 722, 745, 839, 863, 1047
ApoI RAATTY 1 cut(s) 5
AsiGI ACCGGT 1 cut(s) 380
AspS9I GGNCC 3 cut(s) 325, 345, 653
AsuC2I CCSGG 2 cut(s) 329, 349
AsuHPI GGTGA 3 cut(s) 184, 305, 382
AsuII TTCGAA 1 cut(s) 662
AvaII GGWCC 3 cut(s) 325, 345, 653
BauI CACGAG 1 cut(s) 1018
BbvI GCAGC 8 cut(s) 394, 397, 698, 709, 732, 850, 851, 1034
BccI CCATC 3 cut(s) 54, 423, 644
BceAI ACGGC 2 cut(s) 253, 1035
BciT130I CCWGG 1 cut(s) 905
BcnI CCSGG 2 cut(s) 329, 349
BcoDI GTCTC 3 cut(s) 310, 808, 934
BfaI CTAG 2 cut(s) 135, 534
BfmI CTRYAG 1 cut(s) 146
BfuAI ACCTGC 1 cut(s) 945
BglII AGATCT 1 cut(s) 511
BisI GCNGC 9 cut(s) 241, 408, 411, 687, 723, 746, 840, 864, 1048
BlsI GCNGC 9 cut(s) 242, 409, 412, 688, 724, 747, 841, 865, 1049
BmcAI AGTACT 1 cut(s) 715
Bme1390I CCNGG 3 cut(s) 329, 349, 905
Bme18I GGWCC 3 cut(s) 325, 345, 653
BmeRI GACNNNNNGTC 1 cut(s) 955
BmgBI CACGTC 1 cut(s) 925
BmgT120I GGNCC 3 cut(s) 325, 345, 653
BmiI GGNNCC 2 cut(s) 326, 327
BmrFI CCNGG 3 cut(s) 329, 349, 905
BmsI GCATC 2 cut(s) 454, 1088
BpmI CTGGAG 1 cut(s) 738
Bpu14I TTCGAA 1 cut(s) 662
BpuMI CCSGG 2 cut(s) 329, 349
BsaI GGTCTC 1 cut(s) 934
BsaJI CCNNGG 3 cut(s) 235, 341, 904
BsaWI WCCGGW 1 cut(s) 380
BsaXI ACNNNNNCTCC 4 cut(s) 326, 356, 914, 944
Bsc4I CCNNNNNNNGG 5 cut(s) 22, 347, 354, 421, 568
Bse118I RCCGGY 2 cut(s) 194, 380
Bse1I ACTGG 1 cut(s) 721
BseBI CCWGG 1 cut(s) 905
BseDI CCNNGG 3 cut(s) 235, 341, 904
BseLI CCNNNNNNNGG 5 cut(s) 22, 347, 354, 421, 568
BseMII CTCAG 3 cut(s) 351, 462, 873
BseNI ACTGG 1 cut(s) 721
BseRI GAGGAG 1 cut(s) 890
BseX3I CGGCCG 1 cut(s) 238
BseXI GCAGC 8 cut(s) 394, 397, 698, 709, 732, 850, 851, 1034
BseYI CCCAGC 2 cut(s) 455, 707
Bsh1285I CGRYCG 2 cut(s) 241, 381
BshFI GGCC 1 cut(s) 240
BshTI ACCGGT 1 cut(s) 380
BsiEI CGRYCG 2 cut(s) 241, 381
BsiSI CCGG 5 cut(s) 195, 329, 348, 381, 981
BslFI GGGAC 2 cut(s) 38, 338
BslI CCNNNNNNNGG 5 cut(s) 22, 347, 354, 421, 568
BsmAI GTCTC 3 cut(s) 310, 808, 934
BsmBI CGTCTC 1 cut(s) 310
BsmFI GGGAC 2 cut(s) 38, 338
BsmI GAATGC 1 cut(s) 779
BsnI GGCC 1 cut(s) 240
Bso31I GGTCTC 1 cut(s) 934
Bsp119I TTCGAA 1 cut(s) 662
Bsp1407I TGTACA 1 cut(s) 210
Bsp143I GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
BspACI CCGC 2 cut(s) 241, 354
BspANI GGCC 1 cut(s) 240
BspCNI CTCAG 3 cut(s) 352, 461, 874
BspHI TCATGA 1 cut(s) 577
BspLI GGNNCC 2 cut(s) 326, 327
BspMAI CTGCAG 1 cut(s) 150
BspMI ACCTGC 1 cut(s) 945
BspPI GGATC 3 cut(s) 7, 125, 331
BspT104I TTCGAA 1 cut(s) 662
BspTNI GGTCTC 1 cut(s) 934
BsrBI CCGCTC 1 cut(s) 354
BsrFI RCCGGY 2 cut(s) 194, 380
BsrGI TGTACA 1 cut(s) 210
BsrI ACTGG 1 cut(s) 721
BssAI RCCGGY 2 cut(s) 194, 380
BssECI CCNNGG 3 cut(s) 235, 341, 904
BssMI GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
BssSI CACGAG 1 cut(s) 1018
Bst2BI CACGAG 1 cut(s) 1018
Bst2UI CCWGG 1 cut(s) 905
Bst4CI ACNGT 5 cut(s) 232, 616, 646, 796, 823
BstAUI TGTACA 1 cut(s) 210
BstBI TTCGAA 1 cut(s) 662
BstC8I GCNNGC 1 cut(s) 831
BstDEI CTNAG 4 cut(s) 360, 432, 448, 882
BstDSI CCRYGG 2 cut(s) 235, 341
BstENI CCTNNNNNAGG 1 cut(s) 566
BstKTI GATC 7 cut(s) 15, 120, 339, 514, 1017, 1063, 1090
BstMAI GTCTC 3 cut(s) 310, 808, 934
BstMBI GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
BstMCI CGRYCG 2 cut(s) 241, 381
BstMWI GCNNNNNNNGC 5 cut(s) 140, 563, 728, 839, 986
BstNI CCWGG 1 cut(s) 905
BstNSI RCATGY 1 cut(s) 217
BstSCI CCNGG 3 cut(s) 327, 347, 903
BstSFI CTRYAG 1 cut(s) 146
BstV1I GCAGC 8 cut(s) 394, 397, 698, 709, 732, 850, 851, 1034
BstX2I RGATCY 3 cut(s) 12, 336, 511
BstYI RGATCY 3 cut(s) 12, 336, 511
BstZI CGGCCG 1 cut(s) 238
BsuRI GGCC 1 cut(s) 240
BtgI CCRYGG 2 cut(s) 235, 341
BtgZI GCGATG 1 cut(s) 1060
BtrI CACGTC 1 cut(s) 925
BtsIMutI CAGTG 1 cut(s) 828
BveI ACCTGC 1 cut(s) 945
Cac8I GCNNGC 1 cut(s) 831
CciI TCATGA 1 cut(s) 577
Cfr10I RCCGGY 2 cut(s) 194, 380
Cfr13I GGNCC 3 cut(s) 325, 345, 653
CseI GACGC 2 cut(s) 281, 980
Csp6I GTAC 3 cut(s) 211, 364, 714
CspAI ACCGGT 1 cut(s) 380
CspCI CAANNNNNGTGG 2 cut(s) 922, 957
CviAII CATG 4 cut(s) 205, 214, 505, 578
CviQI GTAC 3 cut(s) 211, 364, 714
DdeI CTNAG 4 cut(s) 360, 432, 448, 882
DpnI GATC 7 cut(s) 14, 119, 338, 513, 1016, 1062, 1089
DpnII GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
DrdI GACNNNNNNGTC 1 cut(s) 302
DriI GACNNNNNGTC 1 cut(s) 955
DseDI GACNNNNNNGTC 1 cut(s) 302
EaeI YGGCCR 1 cut(s) 238
EagI CGGCCG 1 cut(s) 238
Eam1105I GACNNNNNGTC 1 cut(s) 955
EclXI CGGCCG 1 cut(s) 238
Eco31I GGTCTC 1 cut(s) 934
Eco32I GATATC 1 cut(s) 160
Eco47I GGWCC 3 cut(s) 325, 345, 653
Eco52I CGGCCG 1 cut(s) 238
Eco57I CTGAAG 3 cut(s) 287, 440, 914
EcoNI CCTNNNNNAGG 1 cut(s) 566
EcoO109I RGGNCCY 1 cut(s) 325
EcoRI GAATTC 1 cut(s) 5
EcoRII CCWGG 1 cut(s) 903
EcoRV GATATC 1 cut(s) 160
Esp3I CGTCTC 1 cut(s) 310
FaeI CATG 4 cut(s) 208, 217, 508, 581
FalI AAGNNNNNCTT 2 cut(s) 673, 705
FaqI GGGAC 2 cut(s) 38, 338
FatI CATG 4 cut(s) 204, 213, 504, 577
FauI CCCGC 1 cut(s) 347
FblI GTMKAC 1 cut(s) 377
Fnu4HI GCNGC 9 cut(s) 241, 408, 411, 687, 723, 746, 840, 864, 1048
Fsp4HI GCNGC 9 cut(s) 241, 408, 411, 687, 723, 746, 840, 864, 1048
FspBI CTAG 2 cut(s) 135, 534
GluI GCNGC 9 cut(s) 241, 408, 411, 687, 723, 746, 840, 864, 1048
GsaI CCCAGC 2 cut(s) 459, 711
GsuI CTGGAG 1 cut(s) 738
HaeIII GGCC 1 cut(s) 240
HapII CCGG 5 cut(s) 195, 329, 348, 381, 981
HgaI GACGC 2 cut(s) 281, 980
Hin1II CATG 4 cut(s) 208, 217, 508, 581
HincII GTYRAC 2 cut(s) 378, 814
HindII GTYRAC 2 cut(s) 378, 814
HinfI GANTC 6 cut(s) 51, 99, 374, 585, 878, 900
HpaII CCGG 5 cut(s) 195, 329, 348, 381, 981
HphI GGTGA 3 cut(s) 184, 305, 382
Hpy166II GTNNAC 5 cut(s) 211, 235, 378, 619, 814
Hpy188I TCNGA 6 cut(s) 98, 122, 420, 606, 883, 1065
Hpy188III TCNNGA 3 cut(s) 10, 515, 578
Hpy8I GTNNAC 5 cut(s) 211, 235, 378, 619, 814
Hpy99I CGWCG 2 cut(s) 173, 800
HpyCH4III ACNGT 5 cut(s) 232, 616, 646, 796, 823
HpyCH4IV ACGT 1 cut(s) 924
HpyCH4V TGCA 3 cut(s) 148, 540, 725
HpyF10VI GCNNNNNNNGC 5 cut(s) 140, 563, 728, 839, 986
HpyF3I CTNAG 4 cut(s) 360, 432, 448, 882
HpySE526I ACGT 1 cut(s) 924
Hsp92II CATG 4 cut(s) 208, 217, 508, 581
KflI GGGWCCC 1 cut(s) 325
Kzo9I GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
LmnI GCTCC 4 cut(s) 351, 428, 472, 719
Lsp1109I GCAGC 8 cut(s) 394, 397, 698, 709, 732, 850, 851, 1034
LweI GCATC 2 cut(s) 454, 1088
MaeI CTAG 2 cut(s) 135, 534
MaeII ACGT 1 cut(s) 924
MaeIII GTNAC 2 cut(s) 293, 908
MalI GATC 7 cut(s) 14, 119, 338, 513, 1016, 1062, 1089
MbiI CCGCTC 1 cut(s) 354
MboI GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
MboII GAAGA 3 cut(s) 97, 651, 929
MflI RGATCY 3 cut(s) 12, 336, 511
MluCI AATT 4 cut(s) 5, 138, 764, 984
MlyI GAGTC 3 cut(s) 60, 383, 887
MmeI TCCRAC 1 cut(s) 76
MnlI CCTC 7 cut(s) 26, 148, 592, 668, 819, 868, 877
MseI TTAA 3 cut(s) 66, 177, 1096
MslI CAYNNNNRTG 1 cut(s) 255
MspA1I CMGCKG 1 cut(s) 243
MspI CCGG 5 cut(s) 195, 329, 348, 381, 981
MspR9I CCNGG 3 cut(s) 329, 349, 905
Mva1269I GAATGC 1 cut(s) 779
MvaI CCWGG 1 cut(s) 905
MwoI GCNNNNNNNGC 5 cut(s) 140, 563, 728, 839, 986
NciI CCSGG 2 cut(s) 329, 349
NdeII GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
NlaIII CATG 4 cut(s) 208, 217, 508, 581
NlaIV GGNNCC 2 cut(s) 326, 327
NmuCI GTSAC 1 cut(s) 293
NspI RCATGY 1 cut(s) 217
NspV TTCGAA 1 cut(s) 662
PagI TCATGA 1 cut(s) 577
PciI ACATGT 1 cut(s) 213
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PctI GAATGC 1 cut(s) 779
PfeI GAWTC 3 cut(s) 99, 585, 900
PflFI GACNNNGTC 2 cut(s) 230, 926
PfoI TCCNGGA 1 cut(s) 347
PinAI ACCGGT 1 cut(s) 380
PkrI GCNGC 9 cut(s) 242, 409, 412, 688, 724, 747, 841, 865, 1049
PleI GAGTC 3 cut(s) 59, 382, 886
PpsI GAGTC 3 cut(s) 59, 382, 886
PpuMI RGGWCCY 1 cut(s) 325
PscI ACATGT 1 cut(s) 213
Psp5II RGGWCCY 1 cut(s) 325
Psp6I CCWGG 1 cut(s) 903
PspFI CCCAGC 2 cut(s) 455, 707
PspGI CCWGG 1 cut(s) 903
PspN4I GGNNCC 2 cut(s) 326, 327
PspPI GGNCC 3 cut(s) 325, 345, 653
PspPPI RGGWCCY 1 cut(s) 325
PstI CTGCAG 1 cut(s) 150
PsuI RGATCY 3 cut(s) 12, 336, 511
PsyI GACNNNGTC 2 cut(s) 230, 926
RsaI GTAC 3 cut(s) 212, 365, 715
RsaNI GTAC 3 cut(s) 211, 364, 714
RseI CAYNNNNRTG 1 cut(s) 255
SalI GTCGAC 1 cut(s) 376
SaqAI TTAA 3 cut(s) 66, 177, 1096
SatI GCNGC 9 cut(s) 241, 408, 411, 687, 723, 746, 840, 864, 1048
Sau3AI GATC 7 cut(s) 12, 117, 336, 511, 1014, 1060, 1087
Sau96I GGNCC 3 cut(s) 325, 345, 653
ScaI AGTACT 1 cut(s) 715
SchI GAGTC 3 cut(s) 60, 383, 887
ScrFI CCNGG 3 cut(s) 329, 349, 905
SfaNI GCATC 2 cut(s) 454, 1088
SfcI CTRYAG 1 cut(s) 146
SfuI TTCGAA 1 cut(s) 662
SgrAI CRCCGGYG 1 cut(s) 194
SinI GGWCC 3 cut(s) 325, 345, 653
SmiMI CAYNNNNRTG 1 cut(s) 255
Sse9I AATT 4 cut(s) 5, 138, 764, 984
SsiI CCGC 2 cut(s) 241, 354
SspMI CTAG 2 cut(s) 135, 534
StyD4I CCNGG 3 cut(s) 327, 347, 903
TaaI ACNGT 5 cut(s) 232, 616, 646, 796, 823
TaiI ACGT 1 cut(s) 927
TaqI TCGA 6 cut(s) 49, 162, 377, 662, 798, 1059
TasI AATT 4 cut(s) 5, 138, 764, 984
TatI WGTACW 3 cut(s) 210, 363, 713
TauI GCSGC 1 cut(s) 243
TfiI GAWTC 3 cut(s) 99, 585, 900
Tru1I TTAA 3 cut(s) 66, 177, 1096
Tru9I TTAA 3 cut(s) 66, 177, 1096
TscAI CASTG 1 cut(s) 828
TseFI GTSAC 1 cut(s) 293
TseI GCWGC 8 cut(s) 407, 410, 686, 722, 745, 839, 863, 1047
Tsp45I GTSAC 1 cut(s) 293
TspDTI ATGAA 6 cut(s) 178, 521, 566, 681, 867, 994
TspGWI ACGGA 2 cut(s) 773, 774
TspRI CASTG 1 cut(s) 828
Tth111I GACNNNGTC 2 cut(s) 230, 926
VpaK11BI GGWCC 3 cut(s) 325, 345, 653
XagI CCTNNNNNAGG 1 cut(s) 566
XapI RAATTY 1 cut(s) 5
XceI RCATGY 1 cut(s) 217
XcmI CCANNNNNNNNNTGG 2 cut(s) 422, 940
XmiI GTMKAC 1 cut(s) 377
XspI CTAG 2 cut(s) 135, 534
ZrmI AGTACT 1 cut(s) 715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.