RchiOBHm_Chr4g0431271

Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000502
Physical Location & Seq
Reverse (-)
55545073 .. 55548354
3282 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39997

Sequence Viewer

Length: 1011 bp
ATGGCCAAGATCAAGATCGGAATCAACGGATTCGGAAGAATCGGACGTTTGGTGGCTAGGGTGGCCCTACAGAGGGACGATGTTGAGCTCGTCGCTGTTAACGATCCATTCATCACCACCGACTACATGACCTACATGTTTAAGTATGACACCGTCCACGGAGCATGGAAGCACCATGAGCTCAAGGTCAAGGATGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTTGCCGTCTTCGGGCTCAGAAACCCAGAGGAGATCCCATGGGGTTCCGTTGGCGCCGATATTGTTGTGGAGTCTACTGGAGTGTTCACTGATAAGGACAAAGCCGCCGCTCACTTGAAGGGTGGTGCCAAGAAGGTTGTCATCTCTGCCCCAAGTAAGGATGCCCCCATGTTTGTTGTGGGAGTCAATGAGCATGAATACAAGTCCGACCTTTGCATTGTTTCCAATGCTAGCTGCACTACCAACTGTCTTGCTCCCCTTGCCAAGGTTATCAACGACAGGTTTGGAATTGTTGAGGGTCTTATGACTACTGTGCACTCCATCACTGCCACCCAGAAGACTGTTGATGGACCATCAGCAAAGGACTGGAGAGGTGGACGTGCTGCCTCATTCAACATCATTCCCAGCAGCACCGGAGCTGCCAAGGCTGTCGGAAAGGTTCTGCCTGCTCTCAATGGCAAGTTGACCGGAATGGCCTTCCGTGTACCCACTGTTGATGTTTCAGTTGTTGACCTCACTGTCAGACTTGAGAAGAAGGCAACCTATGACCAGATCAAGGCTGCTATTAAGGAGGAGTCTGAGGGAAAGTTGAAGGGCATCTTGGGTTACACCGATGAGGATGTTGTGTCAACCGACTTCATTGGTGACAACAGGTCAAGCATCTTTGATGCCAAGGCTGGAATTGCATTGAACGATAACTTTGTCAAGGTTGTTTCATGGTACGACAACGAGTGGGGTTACAGTTCCCGTGTGATTGACTTGATTGTGCACATCGCCAAGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0003006 GO:0003674 GO:0003824 GO:0004365 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005886 GO:0005911 GO:0005975 GO:0005996 GO:0006006 GO:0006082 GO:0006090 GO:0006091 GO:0006094 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0008886 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009651 GO:0009743 GO:0009744 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0016020 GO:0016051 GO:0016052 GO:0016053 GO:0016310 GO:0016491 GO:0016620 GO:0016903 GO:0017144 GO:0018130 GO:0019318 GO:0019319 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0022414 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032787 GO:0034285 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042493 GO:0042542 GO:0042579 GO:0042742 GO:0042866 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043891 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046364 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046677 GO:0046686 GO:0046700 GO:0046872 GO:0046914 GO:0046939 GO:0048046 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051188 GO:0051704 GO:0051707 GO:0051775 GO:0055044 GO:0055086 GO:0055114 GO:0061458 GO:0070013 GO:0071704 GO:0071944 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:0098542 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04066 ko05010 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230 map04066 map05010
Pfam Domains
Protein Families
Gp_dh_C Gp_dh_N

Protein Analysis

336

Amino Acids

36.38

Weight (kDa)

7.68

Isoelectric Point (pI)

20.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gp_dh_N PF00044 4 - 107 2.2e-34 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Gp_dh_C PF02800 159 - 316 5.4e-72 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000502)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13440 AT1G13440 AT3G04120
fragaria_vesca FvH4_4g24420 FvH4_5g07640 FvH4_6g52741 FvH4_6g52755
malus_domestica MD06G1148800.v1.1 MD09G1016900.v1.1 MD13G1111500.v1.1 MD16G1111100.v1.1 MD17G1017300.v1.1
prunus_persica Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.1G234000_v2.0.a1 Prupe.3G300600_v2.0.a1 Prupe.5G155800_v2.0.a1 Prupe.5G155800_v2.0.a1
pyrus_communis pycom06g13820 pycom111g01370 pycom13g09680 pycom16g09410
rosa_chinensis RchiOBHm_Chr1g0380411 RchiOBHm_Chr2g0174371 RchiOBHm_Chr2g0174391 RchiOBHm_Chr2g0174401 RchiOBHm_Chr4g0431271 RchiOBHm_Chr7g0190831 RchiOBHm_Chr7g0209601
rosa_laevigata RLG00000003113 RLG00000004459 RLG00000004490 RLG00000022261 RLG00000022262 RLG00000026305
rosa_multiflora Rmu_sc0000033.1_g000020 Rmu_sc0000243.1_g000023 Rmu_sc0002637.1_g000006 Rmu_sc0002637.1_g000007 Rmu_sc0004033.1_g000020 Rmu_sc0004787.1_g000001 Rmu_sc0005371.1_g000004 Rmu_sc0007885.1_g000015 Rmu_sc0019128.1_g000001
rosa_roxburghii Rroxscaffold_2G00078250 Rroxscaffold_2G00078260 Rroxscaffold_3G00249220 Rroxscaffold_3G00264260 Rroxscaffold_4G00279410 Rroxscaffold_5G00372820
rosa_rugosa Rorug01G0420800 Rorug04G0249800 Rorug04G0249900 Rorug06G0507500 Rorug07G0114500.1
rosa_samantha Rh1AG445000 Rh1BG400200 Rh1CG414800 Rh1DG430100 Rh2AG657500 Rh2AG657600 Rh2BG668500 Rh2BG668600 Rh2BG668700 Rh2CG631600 Rh2DG682100 Rh4AG305700 Rh4BG313100 Rh4CG329300 Rh4DG309500 Rh5AG149300 Rh5DG147700 Rh7AG114100 Rh7AG248500 Rh7BG116700 Rh7BG242600 Rh7CG119400 Rh7CG264500 Rh7DG117900 Rh7DG254400
rosa_wichuraiana Rw1G038730 Rw2G053850 Rw2G053860 Rw4G026580 Rw5G013240 Rw7G021060 Rw7G021070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 743
AccB1I GGYRCC 2 cut(s) 278, 350
AccBSI CCGCTC 1 cut(s) 335
AccI GTMKAC 1 cut(s) 299
AciI CCGC 2 cut(s) 330, 333
AclWI GGATC 2 cut(s) 98, 253
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 279
AfaI GTAC 2 cut(s) 711, 947
AfiI CCNNNNNNNGG 6 cut(s) 72, 73, 237, 382, 490, 781
AflIII ACRYGT 1 cut(s) 135
AgsI TTSAA 4 cut(s) 343, 619, 817, 916
AhdI GACNNNNNGTC 1 cut(s) 877
AjiI CACGTC 1 cut(s) 605
AjuI GAANNNNNNNTTGG 2 cut(s) 809, 841
AluBI AGCT 4 cut(s) 88, 181, 459, 644
AluI AGCT 4 cut(s) 88, 181, 459, 644
Alw21I GWGCWC 4 cut(s) 90, 183, 543, 996
Alw44I GTGCAC 2 cut(s) 539, 992
AlwI GGATC 2 cut(s) 98, 253
AoxI GGCC 3 cut(s) 3, 63, 699
ApaLI GTGCAC 2 cut(s) 539, 992
ApeKI GCWGC 5 cut(s) 459, 608, 633, 644, 785
AspLEI GCGC 1 cut(s) 281
AspS9I GGNCC 2 cut(s) 64, 575
AsuHPI GGTGA 3 cut(s) 106, 227, 881
AsuNHI GCTAGC 1 cut(s) 455
AvaII GGWCC 1 cut(s) 575
BaeGI GKGCMC 2 cut(s) 543, 996
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 278, 350
BanII GRGCYC 3 cut(s) 90, 183, 243
BbsI GAAGAC 3 cut(s) 206, 226, 569
Bbv12I GWGCWC 4 cut(s) 90, 183, 543, 996
BbvI GCAGC 5 cut(s) 446, 595, 631, 645, 772
BccI CCATC 3 cut(s) 554, 566, 586
BceAI ACGGC 1 cut(s) 215
BfaI CTAG 2 cut(s) 57, 456
BfmI CTRYAG 1 cut(s) 68
BfoI RGCGCY 1 cut(s) 282
BisI GCNGC 7 cut(s) 330, 333, 460, 609, 634, 645, 786
BlsI GCNGC 7 cut(s) 331, 334, 461, 610, 635, 646, 787
Bme18I GGWCC 1 cut(s) 575
BmeRI GACNNNNNGTC 1 cut(s) 877
BmgBI CACGTC 1 cut(s) 605
BmgT120I GGNCC 2 cut(s) 64, 575
BmiI GGNNCC 3 cut(s) 271, 280, 352
BmsI GCATC 4 cut(s) 376, 831, 883, 894
BmtI GCTAGC 1 cut(s) 459
BpiI GAAGAC 3 cut(s) 206, 226, 569
BpmI CTGGAG 2 cut(s) 324, 613
BpuEI CTTGAG 2 cut(s) 167, 773
BsaBI GATNNNNATC 2 cut(s) 14, 20
BsaHI GRCGYC 1 cut(s) 279
BsaJI CCNNGG 6 cut(s) 157, 263, 489, 648, 897, 1002
BsaWI WCCGGW 2 cut(s) 638, 692
Bsc4I CCNNNNNNNGG 6 cut(s) 72, 73, 237, 382, 490, 781
Bse1I ACTGG 3 cut(s) 224, 307, 596
Bse8I GATNNNNATC 2 cut(s) 14, 20
BseDI CCNNGG 6 cut(s) 157, 263, 489, 648, 897, 1002
BseGI GGATG 3 cut(s) 199, 391, 850
BseJI GATNNNNATC 2 cut(s) 14, 20
BseLI CCNNNNNNNGG 6 cut(s) 72, 73, 237, 382, 490, 781
BseMII CTCAG 2 cut(s) 256, 795
BseNI ACTGG 3 cut(s) 224, 307, 596
BseRI GAGGAG 3 cut(s) 197, 269, 812
BseSI GKGCMC 2 cut(s) 543, 996
BseXI GCAGC 5 cut(s) 446, 595, 631, 645, 772
BseYI CCCAGC 1 cut(s) 629
BsgI GTGCAG 1 cut(s) 445
BshFI GGCC 3 cut(s) 5, 65, 701
BshNI GGYRCC 2 cut(s) 278, 350
BsiHKAI GWGCWC 4 cut(s) 90, 183, 543, 996
BsiSI CCGG 2 cut(s) 639, 693
BslFI GGGAC 1 cut(s) 89
BslI CCNNNNNNNGG 6 cut(s) 72, 73, 237, 382, 490, 781
BsmFI GGGAC 1 cut(s) 89
BsnI GGCC 3 cut(s) 5, 65, 701
Bsp1286I GDGCHC 5 cut(s) 90, 183, 243, 543, 996
Bsp143I GATC 5 cut(s) 9, 15, 103, 258, 777
Bsp19I CCATGG 1 cut(s) 263
BspACI CCGC 2 cut(s) 330, 333
BspANI GGCC 3 cut(s) 5, 65, 701
BspCNI CTCAG 2 cut(s) 255, 796
BspLI GGNNCC 3 cut(s) 271, 280, 352
BspOI GCTAGC 1 cut(s) 459
BspPI GGATC 2 cut(s) 98, 253
BspT107I GGYRCC 2 cut(s) 278, 350
BsrBI CCGCTC 1 cut(s) 335
BsrI ACTGG 3 cut(s) 224, 307, 596
BssECI CCNNGG 6 cut(s) 157, 263, 489, 648, 897, 1002
BssMI GATC 5 cut(s) 9, 15, 103, 258, 777
BssNI GRCGYC 1 cut(s) 279
BssT1I CCWWGG 5 cut(s) 263, 489, 648, 897, 1002
Bst4CI ACNGT 7 cut(s) 154, 473, 538, 568, 718, 745, 968
Bst6I CTCTTC 1 cut(s) 215
BstACI GRCGYC 1 cut(s) 279
BstC8I GCNNGC 2 cut(s) 457, 672
BstDEI CTNAG 2 cut(s) 242, 804
BstDSI CCRYGG 2 cut(s) 157, 263
BstENI CCTNNNNNAGG 1 cut(s) 488
BstF5I GGATG 3 cut(s) 199, 391, 850
BstH2I RGCGCY 1 cut(s) 282
BstHHI GCGC 1 cut(s) 281
BstKTI GATC 5 cut(s) 12, 18, 106, 261, 780
BstMBI GATC 5 cut(s) 9, 15, 103, 258, 777
BstMWI GCNNNNNNNGC 5 cut(s) 62, 178, 485, 650, 908
BstNSI RCATGY 1 cut(s) 139
BstSFI CTRYAG 1 cut(s) 68
BstSLI GKGCMC 2 cut(s) 543, 996
BstV1I GCAGC 5 cut(s) 446, 595, 631, 645, 772
BstV2I GAAGAC 3 cut(s) 206, 226, 569
BstX2I RGATCY 1 cut(s) 258
BstYI RGATCY 1 cut(s) 258
BsuRI GGCC 3 cut(s) 5, 65, 701
BtgI CCRYGG 2 cut(s) 157, 263
BtgZI GCGATG 1 cut(s) 982
BtrI CACGTC 1 cut(s) 605
BtsCI GGATG 3 cut(s) 199, 391, 850
BtsI GCAGTG 1 cut(s) 549
BtsIMutI CAGTG 4 cut(s) 312, 549, 714, 741
Cac8I GCNNGC 2 cut(s) 457, 672
CfoI GCGC 1 cut(s) 281
Cfr13I GGNCC 2 cut(s) 64, 575
Csp6I GTAC 2 cut(s) 710, 946
CviAII CATG 8 cut(s) 127, 136, 165, 176, 264, 394, 419, 942
CviQI GTAC 2 cut(s) 710, 946
DdeI CTNAG 2 cut(s) 242, 804
DinI GGCGCC 1 cut(s) 280
DpnI GATC 5 cut(s) 11, 17, 105, 260, 779
DpnII GATC 5 cut(s) 9, 15, 103, 258, 777
DrdI GACNNNNNNGTC 1 cut(s) 743
DriI GACNNNNNGTC 1 cut(s) 877
DseDI GACNNNNNNGTC 1 cut(s) 743
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 215
Eam1105I GACNNNNNGTC 1 cut(s) 877
EarI CTCTTC 1 cut(s) 215
Ecl136II GAGCTC 2 cut(s) 88, 181
Eco130I CCWWGG 5 cut(s) 263, 489, 648, 897, 1002
Eco24I GRGCYC 3 cut(s) 90, 183, 243
Eco47I GGWCC 1 cut(s) 575
Eco53kI GAGCTC 2 cut(s) 88, 181
EcoICRI GAGCTC 2 cut(s) 88, 181
EcoNI CCTNNNNNAGG 1 cut(s) 488
EcoT14I CCWWGG 5 cut(s) 263, 489, 648, 897, 1002
EcoT38I GRGCYC 3 cut(s) 90, 183, 243
EgeI GGCGCC 1 cut(s) 280
EheI GGCGCC 1 cut(s) 280
ErhI CCWWGG 5 cut(s) 263, 489, 648, 897, 1002
FaeI CATG 8 cut(s) 130, 139, 168, 179, 267, 397, 422, 945
FalI AAGNNNNNCTT 2 cut(s) 809, 841
FaqI GGGAC 1 cut(s) 89
FatI CATG 8 cut(s) 126, 135, 164, 175, 263, 393, 418, 941
FblI GTMKAC 1 cut(s) 299
Fnu4HI GCNGC 7 cut(s) 330, 333, 460, 609, 634, 645, 786
FokI GGATG 3 cut(s) 206, 398, 857
FriOI GRGCYC 3 cut(s) 90, 183, 243
Fsp4HI GCNGC 7 cut(s) 330, 333, 460, 609, 634, 645, 786
FspBI CTAG 2 cut(s) 57, 456
GlaI GCGC 1 cut(s) 280
GluI GCNGC 7 cut(s) 330, 333, 460, 609, 634, 645, 786
GsaI CCCAGC 1 cut(s) 633
GsuI CTGGAG 2 cut(s) 324, 613
HaeII RGCGCY 1 cut(s) 282
HaeIII GGCC 3 cut(s) 5, 65, 701
HapII CCGG 2 cut(s) 639, 693
HhaI GCGC 1 cut(s) 281
Hin1I GRCGYC 1 cut(s) 279
Hin1II CATG 8 cut(s) 130, 139, 168, 179, 267, 397, 422, 945
Hin6I GCGC 1 cut(s) 279
HinP1I GCGC 1 cut(s) 279
HincII GTYRAC 4 cut(s) 100, 690, 736, 855
HindII GTYRAC 4 cut(s) 100, 690, 736, 855
HinfI GANTC 6 cut(s) 21, 30, 39, 296, 408, 800
HpaI GTTAAC 1 cut(s) 100
HpaII CCGG 2 cut(s) 639, 693
HphI GGTGA 3 cut(s) 106, 227, 881
Hpy188I TCNGA 8 cut(s) 20, 35, 44, 245, 433, 659, 749, 805
Hpy188III TCNNGA 1 cut(s) 13
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 5 cut(s) 337, 352, 712, 754, 811
HpyCH4III ACNGT 7 cut(s) 154, 473, 538, 568, 718, 745, 968
HpyCH4IV ACGT 2 cut(s) 46, 604
HpyCH4V TGCA 5 cut(s) 441, 462, 541, 911, 994
HpyF10VI GCNNNNNNNGC 5 cut(s) 62, 178, 485, 650, 908
HpyF3I CTNAG 2 cut(s) 242, 804
HpySE526I ACGT 2 cut(s) 46, 604
Hsp92I GRCGYC 1 cut(s) 279
Hsp92II CATG 8 cut(s) 130, 139, 168, 179, 267, 397, 422, 945
HspAI GCGC 1 cut(s) 279
KasI GGCGCC 1 cut(s) 278
KspAI GTTAAC 1 cut(s) 100
Kzo9I GATC 5 cut(s) 9, 15, 103, 258, 777
LmnI GCTCC 3 cut(s) 161, 484, 641
Lsp1109I GCAGC 5 cut(s) 446, 595, 631, 645, 772
LweI GCATC 4 cut(s) 376, 831, 883, 894
MaeI CTAG 2 cut(s) 57, 456
MaeII ACGT 2 cut(s) 46, 604
MaeIII GTNAC 3 cut(s) 830, 869, 962
MalI GATC 5 cut(s) 11, 17, 105, 260, 779
MbiI CCGCTC 1 cut(s) 335
MboI GATC 5 cut(s) 9, 15, 103, 258, 777
MboII GAAGA 6 cut(s) 48, 202, 211, 226, 574, 769
MflI RGATCY 1 cut(s) 258
MhlI GDGCHC 5 cut(s) 90, 183, 243, 543, 996
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 513, 906
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 279
MlyI GAGTC 3 cut(s) 305, 417, 809
MmeI TCCRAC 2 cut(s) 456, 637
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 99, 141, 792, 1009
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 639, 693
MwoI GCNNNNNNNGC 5 cut(s) 62, 178, 485, 650, 908
NarI GGCGCC 1 cut(s) 279
NcoI CCATGG 1 cut(s) 263
NdeII GATC 5 cut(s) 9, 15, 103, 258, 777
NheI GCTAGC 1 cut(s) 455
NlaIII CATG 8 cut(s) 130, 139, 168, 179, 267, 397, 422, 945
NlaIV GGNNCC 3 cut(s) 271, 280, 352
NmuCI GTSAC 1 cut(s) 869
NspI RCATGY 1 cut(s) 139
PciI ACATGT 1 cut(s) 135
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PfeI GAWTC 3 cut(s) 21, 30, 39
PflFI GACNNNGTC 1 cut(s) 152
PkrI GCNGC 7 cut(s) 331, 334, 461, 610, 635, 646, 787
PleI GAGTC 3 cut(s) 304, 416, 808
PluTI GGCGCC 1 cut(s) 282
PpsI GAGTC 3 cut(s) 304, 416, 808
PscI ACATGT 1 cut(s) 135
Psp124BI GAGCTC 2 cut(s) 90, 183
PspFI CCCAGC 1 cut(s) 629
PspN4I GGNNCC 3 cut(s) 271, 280, 352
PspPI GGNCC 2 cut(s) 64, 575
PsuI RGATCY 1 cut(s) 258
PsyI GACNNNGTC 1 cut(s) 152
RsaI GTAC 2 cut(s) 711, 947
RsaNI GTAC 2 cut(s) 710, 946
SacI GAGCTC 2 cut(s) 90, 183
SaqAI TTAA 4 cut(s) 99, 141, 792, 1009
SatI GCNGC 7 cut(s) 330, 333, 460, 609, 634, 645, 786
Sau3AI GATC 5 cut(s) 9, 15, 103, 258, 777
Sau96I GGNCC 2 cut(s) 64, 575
SchI GAGTC 3 cut(s) 305, 417, 809
SduI GDGCHC 5 cut(s) 90, 183, 243, 543, 996
SfaNI GCATC 4 cut(s) 376, 831, 883, 894
SfcI CTRYAG 1 cut(s) 68
SfoI GGCGCC 1 cut(s) 280
SinI GGWCC 1 cut(s) 575
SmlI CTYRAG 2 cut(s) 182, 752
SmoI CTYRAG 2 cut(s) 182, 752
Sse9I AATT 2 cut(s) 513, 906
SsiI CCGC 2 cut(s) 330, 333
SspDI GGCGCC 1 cut(s) 278
SspMI CTAG 2 cut(s) 57, 456
SstI GAGCTC 2 cut(s) 90, 183
StyI CCWWGG 5 cut(s) 263, 489, 648, 897, 1002
TaaI ACNGT 7 cut(s) 154, 473, 538, 568, 718, 745, 968
TaiI ACGT 2 cut(s) 49, 607
TasI AATT 2 cut(s) 513, 906
TauI GCSGC 2 cut(s) 332, 335
TfiI GAWTC 3 cut(s) 21, 30, 39
Tru1I TTAA 4 cut(s) 99, 141, 792, 1009
Tru9I TTAA 4 cut(s) 99, 141, 792, 1009
TscAI CASTG 4 cut(s) 319, 556, 721, 748
TseFI GTSAC 1 cut(s) 869
TseI GCWGC 5 cut(s) 459, 608, 633, 644, 785
Tsp45I GTSAC 1 cut(s) 869
TspDTI ATGAA 4 cut(s) 100, 435, 853, 930
TspGWI ACGGA 4 cut(s) 42, 174, 262, 695
TspRI CASTG 4 cut(s) 319, 556, 721, 748
Tth111I GACNNNGTC 1 cut(s) 152
VneI GTGCAC 2 cut(s) 539, 992
VpaK11BI GGWCC 1 cut(s) 575
XagI CCTNNNNNAGG 1 cut(s) 488
XceI RCATGY 1 cut(s) 139
XcmI CCANNNNNNNNNTGG 1 cut(s) 400
XmiI GTMKAC 1 cut(s) 299
XspI CTAG 2 cut(s) 57, 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.