Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Forward (+)

21656484 .. 21660812

Gene Structure 4329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G58570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGAGTTCAAATTCATGGGCTGATGTTTCTGAATCAGAGAGGGCACCATCTGGTGGTGGTTGGGGTTATTCTCGTCCGTCTCGAACCAACTATGTTCCTCCACATCTTAGGAGCCGTACACCATCTTCGGAGTTTGTTGCTCCTTCACCTGGTAATAATGATCGTGGGGGATATGGTGGTGCAAATAGTGGTTATGGTGGTCGAGGCCAAGGTTATGGTGGTCGAGGTTCGGGCTATGGTGGTAGAGGAGGTCCTGTGGGCGGTTGGAATGCCAGAAGTGGAGGTTGGGACCGTCGGGATACTGAAACTAACCCGTTTGGTAATGATGGAAATGCAGACCCGGCTGTTAACGAGCAGGAAAACACTGTCATTAACTTTGAGGCCTATGAAGATATTCCCATCGAGACAAGTGGGGATAATGTGCCACCTCCTGTTAATACATTTGCAGAGATAGACCTCGGAGAAGCTCTCAATCTAAATATCCAGAGGTGCAAATACGTGAAGCCGACCCCTGTGCAGCGTAATGCAATTCCCATATTGGCTGCAGGAAGGGATTTGATGGCTTGTGCTCAGACAGGCTCTGGGAAGACAGCTGCCTTTTGTTTTCCGATTATTAGTGGGATTATGAAGGATCAGCATATAGAGAGACCACGTGGAGTTCGGGGAGTCTATCCTCTTGCTGTCATTCTCTCACCAACAAGGGAATTGGCTTGCCAGATACATGATGAAGCCAGAAAGTTCTCCTATCAAACTGGAGTGAAAGTTGTGGTTGCTTACGGAGGAACACCAGTCAACCAACAGATTAGGGAGCTTGAAAGAGGAGTTGATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTTGCTTGAGAGAGGTAGAGTCTCATTACAGATGGTAAGATTCTTGGCACTTGATGAGGCGGACAGAATGCTGGACATGGGTTTTGAACCACAAATCAGGAAGATCGTTCAGCAGATGGACATGCCTCCTCCTGGTGTCCGGCAGACAATGTTGTTCAGTGCTACATTTCCTAGGGAGATACAGAGACTTGCATCTGATTTTCTTTCAAATTACATATTTCTGGCTGTTGGAAGAGTGGGTTCAAGTACGGATTTAATTGTCCAAAGAGTAGAGTTTGTTCATGATTCTGACAAAAGAAGCCATCTAATGGACCTTCTTCATGCCCAGAGGGAGAATGGTAACCAAGGAAAGCAAGCTTTGACTCTAGTTTTTGTGGAGACAAAGAAGGGAGCTGACTCTTTGGAGAATTGGTTGTGCATCAATGGTTTCCCAGCAACGACCATTCATGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACTGAGATCATTCAAGACTGGGCGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGGTCTTGACATTCCGCACGTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGACTATGTCCACCGTATCGGACGAACAGGACGTGCAGGAAATTCAGGACTAGCAACTGCTTTCTTCAATGACAACAACACAACAATGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCTAACCAGGAGGTCCCTGACTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAAGAACCGGCGGTCTGGTGGACGGTTTGGTGGTCGTGACTTCAGGAGAGAATCTTTTAGTCGAGGCGGTGGTGGTGCTGACTACTATGGTGGAGGTGGTGGATATGGAGGCGTTCCTGGTGGTGGCTATGGAGCAATGCCTGGTGGGTACGGACCCGTACCAGGTGGTGGATATGGAAATGTTCCGGGTGGTGGTTATGCACCTTATGGTAGAGGTGGTGGTGCTTACTATGGTCCTGGAGGATATGGAACCGTTCCTAACCAAGGGTATGGTCCTGGAGTGGCTAGTGCGTGGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

646

Amino Acids

69.24

Weight (kDa)

7.67

Isoelectric Point (pI)

41.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	170 - 349	2.1e-49	DEAD/DEAH box helicase
Helicase_C	PF00271	385 - 500	4.6e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	43
AccB7I	CCANNNNNTGG	3 cut(s)	53, 1168, 1808
AciI	CCGC	6 cut(s)	261, 920, 1363, 1415, 1651, 1707
AclWI	GGATC	1 cut(s)	639
AcoI	YGGCCR	1 cut(s)	1548
AcsI	RAATTY	2 cut(s)	10, 1501
AcuI	CTGAAG	1 cut(s)	1666
AcvI	CACGTG	3 cut(s)	653, 1400, 1420
AfaI	GTAC	4 cut(s)	118, 1108, 1790, 1800
AgsI	TTSAA	7 cut(s)	9, 815, 947, 1068, 1104, 1354, 1528
AjiI	CACGTC	1 cut(s)	1493
AjnI	CCWGG	9 cut(s)	148, 844, 991, 1584, 1756, 1780, 1801, 1876, 1915
AjuI	GAANNNNNNNTTGG	2 cut(s)	268, 300
AluBI	AGCT	7 cut(s)	467, 593, 811, 1217, 1253, 1567, 1580
AluI	AGCT	7 cut(s)	467, 593, 811, 1217, 1253, 1567, 1580
Alw21I	GWGCWC	1 cut(s)	571
Alw26I	GTCTC	6 cut(s)	84, 398, 640, 886, 1039, 1232
AlwI	GGATC	1 cut(s)	639
AlwNI	CAGNNNCTG	1 cut(s)	581
AoxI	GGCC	3 cut(s)	205, 381, 1548
ApeKI	GCWGC	4 cut(s)	517, 542, 593, 1394
ApoI	RAATTY	2 cut(s)	10, 1501
ArsI	GACNNNNNNTTYG	4 cut(s)	926, 958, 1357, 1389
Asp700I	GAANNNNTTC	1 cut(s)	393
AspA2I	CCTAGG	1 cut(s)	1031
AspS9I	GGNCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
AsuC2I	CCSGG	2 cut(s)	341, 1827
AsuHPI	GGTGA	3 cut(s)	138, 684, 1322
AvaII	GGWCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
AvrII	CCTAGG	1 cut(s)	1031
BaeGI	GKGCMC	1 cut(s)	46
BalI	TGGCCA	1 cut(s)	1550
BanI	GGYRCC	1 cut(s)	43
BarI	GAAGNNNNNNTAC	2 cut(s)	109, 141
BauI	CACGAG	1 cut(s)	1620
BbrPI	CACGTG	3 cut(s)	653, 1400, 1420
BbsI	GAAGAC	1 cut(s)	593
Bbv12I	GWGCWC	1 cut(s)	571
BbvI	GCAGC	4 cut(s)	529, 529, 580, 1406
BccI	CCATC	8 cut(s)	55, 130, 320, 407, 553, 886, 970, 1170
BceAI	ACGGC	1 cut(s)	99
BcgI	CGANNNNNNTGC	2 cut(s)	496, 530
BciT130I	CCWGG	9 cut(s)	150, 846, 993, 1586, 1758, 1782, 1803, 1878, 1917
BciVI	GTATCC	1 cut(s)	292
BcnI	CCSGG	2 cut(s)	341, 1827
BcoDI	GTCTC	6 cut(s)	84, 398, 640, 886, 1039, 1232
BfaI	CTAG	4 cut(s)	1032, 1226, 1511, 1926
BfmI	CTRYAG	1 cut(s)	543
BfuI	GTATCC	1 cut(s)	292
BisI	GCNGC	4 cut(s)	518, 543, 594, 1395
BlnI	CCTAGG	1 cut(s)	1031
BlpI	GCTNAGC	1 cut(s)	1563
BlsI	GCNGC	4 cut(s)	519, 544, 595, 1396
Bme18I	GGWCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
BmgBI	CACGTC	1 cut(s)	1493
BmgT120I	GGNCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
BmiI	GGNNCC	6 cut(s)	45, 113, 290, 1593, 1795, 1891
BmrI	ACTGGG	1 cut(s)	1368
BmsI	GCATC	3 cut(s)	1061, 1287, 1625
BmuI	ACTGGG	1 cut(s)	1368
BpiI	GAAGAC	1 cut(s)	593
BplI	GAGNNNNNCTC	2 cut(s)	453, 485
BpmI	CTGGAG	3 cut(s)	774, 1899, 1938
Bpu1102I	GCTNAGC	1 cut(s)	1563
BpuEI	CTTGAG	1 cut(s)	887
BpuMI	CCSGG	2 cut(s)	341, 1827
BsaAI	YACGTR	4 cut(s)	499, 653, 1400, 1420
BsaBI	GATNNNNATC	1 cut(s)	1615
BsaI	GGTCTC	1 cut(s)	640
BsaJI	CCNNGG	6 cut(s)	208, 457, 845, 1031, 1204, 1903
BsaXI	ACNNNNNCTCC	6 cut(s)	240, 270, 747, 777, 1256, 1286
Bse118I	RCCGGY	1 cut(s)	1647
Bse1I	ACTGG	5 cut(s)	757, 788, 1363, 1563, 1604
Bse3DI	GCAATG	1 cut(s)	1782
Bse8I	GATNNNNATC	1 cut(s)	1615
BseBI	CCWGG	9 cut(s)	150, 846, 993, 1586, 1758, 1782, 1803, 1878, 1917
BseDI	CCNNGG	6 cut(s)	208, 457, 845, 1031, 1204, 1903
BseJI	GATNNNNATC	1 cut(s)	1615
BseMI	GCAATG	1 cut(s)	1782
BseMII	CTCAG	3 cut(s)	584, 1334, 1554
BseNI	ACTGG	5 cut(s)	757, 788, 1363, 1563, 1604
BseRI	GAGGAG	3 cut(s)	261, 834, 978
BseSI	GKGCMC	1 cut(s)	46
BseXI	GCAGC	4 cut(s)	529, 529, 580, 1406
BseYI	CCCAGC	1 cut(s)	1291
BsgI	GTGCAG	2 cut(s)	536, 1515
BshFI	GGCC	3 cut(s)	207, 383, 1550
BshNI	GGYRCC	1 cut(s)	43
BsiHKAI	GWGCWC	1 cut(s)	571
BsiSI	CCGG	4 cut(s)	341, 1000, 1648, 1826
BslFI	GGGAC	2 cut(s)	302, 1577
BsmAI	GTCTC	6 cut(s)	84, 398, 640, 886, 1039, 1232
BsmBI	CGTCTC	1 cut(s)	84
BsmFI	GGGAC	2 cut(s)	302, 1577
BsmI	GAATGC	2 cut(s)	274, 933
BsnI	GGCC	3 cut(s)	207, 383, 1550
Bso31I	GGTCTC	1 cut(s)	640
Bsp1286I	GDGCHC	2 cut(s)	46, 571
Bsp143I	GATC	5 cut(s)	160, 631, 963, 1346, 1441
Bsp1720I	GCTNAGC	1 cut(s)	1563
BspACI	CCGC	6 cut(s)	261, 920, 1363, 1415, 1651, 1707
BspANI	GGCC	3 cut(s)	207, 383, 1550
BspCNI	CTCAG	3 cut(s)	583, 1335, 1555
BspHI	TCATGA	1 cut(s)	1141
BspLI	GGNNCC	6 cut(s)	45, 113, 290, 1593, 1795, 1891
BspMAI	CTGCAG	1 cut(s)	547
BspPI	GGATC	1 cut(s)	639
BspT107I	GGYRCC	1 cut(s)	43
BspTNI	GGTCTC	1 cut(s)	640
BsrDI	GCAATG	1 cut(s)	1782
BsrFI	RCCGGY	1 cut(s)	1647
BsrI	ACTGG	5 cut(s)	757, 788, 1363, 1563, 1604
BssAI	RCCGGY	1 cut(s)	1647
BssECI	CCNNGG	6 cut(s)	208, 457, 845, 1031, 1204, 1903
BssMI	GATC	5 cut(s)	160, 631, 963, 1346, 1441
BssSI	CACGAG	1 cut(s)	1620
BssT1I	CCWWGG	4 cut(s)	208, 1031, 1204, 1903
Bst2BI	CACGAG	1 cut(s)	1620
Bst2UI	CCWGG	9 cut(s)	150, 846, 993, 1586, 1758, 1782, 1803, 1878, 1917
Bst4CI	ACNGT	5 cut(s)	293, 367, 1475, 1665, 1894
Bst6I	CTCTTC	1 cut(s)	1087
BstAPI	GCANNNNNTGC	1 cut(s)	1622
BstBAI	YACGTR	4 cut(s)	499, 653, 1400, 1420
BstC8I	GCNNGC	2 cut(s)	712, 1215
BstDEI	CTNAG	4 cut(s)	107, 570, 1343, 1563
BstEII	GGTNACC	1 cut(s)	1199
BstENI	CCTNNNNNAGG	1 cut(s)	1902
BstKTI	GATC	5 cut(s)	163, 634, 966, 1349, 1444
BstMAI	GTCTC	6 cut(s)	84, 398, 640, 886, 1039, 1232
BstMBI	GATC	5 cut(s)	160, 631, 963, 1346, 1441
BstMWI	GCNNNNNNNGC	2 cut(s)	341, 1622
BstNI	CCWGG	9 cut(s)	150, 846, 993, 1586, 1758, 1782, 1803, 1878, 1917
BstNSI	RCATGY	1 cut(s)	985
BstPI	GGTNACC	1 cut(s)	1199
BstSFI	CTRYAG	1 cut(s)	543
BstSLI	GKGCMC	1 cut(s)	46
BstV1I	GCAGC	4 cut(s)	529, 529, 580, 1406
BstV2I	GAAGAC	1 cut(s)	593
BstXI	CCANNNNNNTGG	3 cut(s)	215, 1558, 1910
BsuI	GTATCC	1 cut(s)	292
BsuRI	GGCC	3 cut(s)	207, 383, 1550
BtrI	CACGTC	1 cut(s)	1493
BtsIMutI	CAGTG	4 cut(s)	363, 1024, 1340, 1556
Cac8I	GCNNGC	2 cut(s)	712, 1215
CaiI	CAGNNNCTG	1 cut(s)	581
CciI	TCATGA	1 cut(s)	1141
Cfr10I	RCCGGY	1 cut(s)	1647
Cfr13I	GGNCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
CsiI	ACCWGGT	2 cut(s)	148, 1801
Csp6I	GTAC	4 cut(s)	117, 1107, 1789, 1799
CspCI	CAANNNNNGTGG	2 cut(s)	1371, 1406
CviAII	CATG	8 cut(s)	15, 722, 937, 982, 1142, 1181, 1307, 1427
CviQI	GTAC	4 cut(s)	117, 1107, 1789, 1799
DdeI	CTNAG	4 cut(s)	107, 570, 1343, 1563
DpnI	GATC	5 cut(s)	162, 633, 965, 1348, 1443
DpnII	GATC	5 cut(s)	160, 631, 963, 1346, 1441
EaeI	YGGCCR	1 cut(s)	1548
Eam1104I	CTCTTC	1 cut(s)	1087
EarI	CTCTTC	1 cut(s)	1087
EciI	GGCGGA	2 cut(s)	935, 1378
Eco130I	CCWWGG	4 cut(s)	208, 1031, 1204, 1903
Eco147I	AGGCCT	1 cut(s)	383
Eco31I	GGTCTC	1 cut(s)	640
Eco47I	GGWCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
Eco57I	CTGAAG	1 cut(s)	1666
Eco72I	CACGTG	3 cut(s)	653, 1400, 1420
Eco91I	GGTNACC	1 cut(s)	1199
EcoNI	CCTNNNNNAGG	1 cut(s)	1902
EcoO109I	RGGNCCY	2 cut(s)	251, 1591
EcoO65I	GGTNACC	1 cut(s)	1199
EcoRII	CCWGG	9 cut(s)	148, 844, 991, 1584, 1756, 1780, 1801, 1876, 1915
EcoT14I	CCWWGG	4 cut(s)	208, 1031, 1204, 1903
ErhI	CCWWGG	4 cut(s)	208, 1031, 1204, 1903
Esp3I	CGTCTC	1 cut(s)	84
FaeI	CATG	8 cut(s)	18, 725, 940, 985, 1145, 1184, 1310, 1430
FaqI	GGGAC	2 cut(s)	302, 1577
FatI	CATG	8 cut(s)	14, 721, 936, 981, 1141, 1180, 1306, 1426
Fnu4HI	GCNGC	4 cut(s)	518, 543, 594, 1395
Fsp4HI	GCNGC	4 cut(s)	518, 543, 594, 1395
FspBI	CTAG	4 cut(s)	1032, 1226, 1511, 1926
GluI	GCNGC	4 cut(s)	518, 543, 594, 1395
GsaI	CCCAGC	1 cut(s)	1295
GsuI	CTGGAG	3 cut(s)	774, 1899, 1938
HaeIII	GGCC	3 cut(s)	207, 383, 1550
HapII	CCGG	4 cut(s)	341, 1000, 1648, 1826
Hin1II	CATG	8 cut(s)	18, 725, 940, 985, 1145, 1184, 1310, 1430
HincII	GTYRAC	2 cut(s)	349, 793
HindII	GTYRAC	2 cut(s)	349, 793
HindIII	AAGCTT	1 cut(s)	1215
HinfI	GANTC	9 cut(s)	32, 666, 879, 900, 1145, 1222, 1256, 1606, 1691
HpaI	GTTAAC	1 cut(s)	349
HpaII	CCGG	4 cut(s)	341, 1000, 1648, 1826
HphI	GGTGA	3 cut(s)	138, 684, 1322
Hpy166II	GTNNAC	6 cut(s)	119, 349, 793, 1435, 1471, 1661
Hpy188I	TCNGA	9 cut(s)	31, 37, 130, 461, 573, 609, 1057, 1150, 1481
Hpy8I	GTNNAC	6 cut(s)	119, 349, 793, 1435, 1471, 1661
Hpy99I	CGWCG	1 cut(s)	297
HpyAV	CCTTC	5 cut(s)	153, 543, 622, 1184, 1240
HpyCH4III	ACNGT	5 cut(s)	293, 367, 1475, 1665, 1894
HpyCH4IV	ACGT	5 cut(s)	498, 652, 1399, 1419, 1492
HpyF10VI	GCNNNNNNNGC	2 cut(s)	341, 1622
HpyF3I	CTNAG	4 cut(s)	107, 570, 1343, 1563
HpySE526I	ACGT	5 cut(s)	498, 652, 1399, 1419, 1492
Hsp92II	CATG	8 cut(s)	18, 725, 940, 985, 1145, 1184, 1310, 1430
KspAI	GTTAAC	1 cut(s)	349
Kzo9I	GATC	5 cut(s)	160, 631, 963, 1346, 1441
LmnI	GCTCC	5 cut(s)	111, 145, 808, 1250, 1772
Lsp1109I	GCAGC	4 cut(s)	529, 529, 580, 1406
LweI	GCATC	3 cut(s)	1061, 1287, 1625
MabI	ACCWGGT	2 cut(s)	148, 1801
MaeI	CTAG	4 cut(s)	1032, 1226, 1511, 1926
MaeII	ACGT	5 cut(s)	498, 652, 1399, 1419, 1492
MaeIII	GTNAC	3 cut(s)	1199, 1317, 1676
MalI	GATC	5 cut(s)	162, 633, 965, 1348, 1443
MboI	GATC	5 cut(s)	160, 631, 963, 1346, 1441
MboII	GAAGA	7 cut(s)	117, 401, 598, 973, 1104, 1169, 1516
MhlI	GDGCHC	2 cut(s)	46, 571
MlsI	TGGCCA	1 cut(s)	1550
MluCI	AATT	7 cut(s)	10, 528, 704, 1069, 1116, 1267, 1501
MluNI	TGGCCA	1 cut(s)	1550
MlyI	GAGTC	5 cut(s)	675, 888, 1216, 1250, 1600
MmeI	TCCRAC	2 cut(s)	245, 1069
Mox20I	TGGCCA	1 cut(s)	1550
MroXI	GAANNNNTTC	1 cut(s)	393
MscI	TGGCCA	1 cut(s)	1550
MseI	TTAA	5 cut(s)	348, 372, 435, 854, 1115
MslI	CAYNNNNRTG	1 cut(s)	1544
Msp20I	TGGCCA	1 cut(s)	1550
MspA1I	CMGCKG	1 cut(s)	593
MspI	CCGG	4 cut(s)	341, 1000, 1648, 1826
Mva1269I	GAATGC	2 cut(s)	274, 933
MvaI	CCWGG	9 cut(s)	150, 846, 993, 1586, 1758, 1782, 1803, 1878, 1917
MwoI	GCNNNNNNNGC	2 cut(s)	341, 1622
NciI	CCSGG	2 cut(s)	341, 1827
NdeII	GATC	5 cut(s)	160, 631, 963, 1346, 1441
NlaIII	CATG	8 cut(s)	18, 725, 940, 985, 1145, 1184, 1310, 1430
NlaIV	GGNNCC	6 cut(s)	45, 113, 290, 1593, 1795, 1891
NmuCI	GTSAC	2 cut(s)	1317, 1676
NspI	RCATGY	1 cut(s)	985
PagI	TCATGA	1 cut(s)	1141
PceI	AGGCCT	1 cut(s)	383
PcsI	WCGNNNNNNNCGW	2 cut(s)	79, 1489
PctI	GAATGC	2 cut(s)	274, 933
PdmI	GAANNNNTTC	1 cut(s)	393
PfeI	GAWTC	4 cut(s)	32, 900, 1145, 1691
PflFI	GACNNNGTC	1 cut(s)	1466
PflMI	CCANNNNNTGG	3 cut(s)	53, 1168, 1808
PfoI	TCCNGGA	2 cut(s)	1876, 1915
PkrI	GCNGC	4 cut(s)	519, 544, 595, 1396
PleI	GAGTC	5 cut(s)	674, 887, 1216, 1250, 1600
PmaCI	CACGTG	3 cut(s)	653, 1400, 1420
PmlI	CACGTG	3 cut(s)	653, 1400, 1420
PpsI	GAGTC	5 cut(s)	674, 887, 1216, 1250, 1600
Ppu21I	YACGTR	4 cut(s)	499, 653, 1400, 1420
PpuMI	RGGWCCY	2 cut(s)	251, 1591
Psp5II	RGGWCCY	2 cut(s)	251, 1591
Psp6I	CCWGG	9 cut(s)	148, 844, 991, 1584, 1756, 1780, 1801, 1876, 1915
PspCI	CACGTG	3 cut(s)	653, 1400, 1420
PspEI	GGTNACC	1 cut(s)	1199
PspFI	CCCAGC	1 cut(s)	1291
PspGI	CCWGG	9 cut(s)	148, 844, 991, 1584, 1756, 1780, 1801, 1876, 1915
PspN4I	GGNNCC	6 cut(s)	45, 113, 290, 1593, 1795, 1891
PspPI	GGNCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
PspPPI	RGGWCCY	2 cut(s)	251, 1591
PsrI	GAACNNNNNNTAC	2 cut(s)	1122, 1154
PstI	CTGCAG	1 cut(s)	547
PstNI	CAGNNNCTG	1 cut(s)	581
PsyI	GACNNNGTC	1 cut(s)	1466
PvuII	CAGCTG	1 cut(s)	593
RsaI	GTAC	4 cut(s)	118, 1108, 1790, 1800
RsaNI	GTAC	4 cut(s)	117, 1107, 1789, 1799
RseI	CAYNNNNRTG	1 cut(s)	1544
SaqAI	TTAA	5 cut(s)	348, 372, 435, 854, 1115
SatI	GCNGC	4 cut(s)	518, 543, 594, 1395
Sau3AI	GATC	5 cut(s)	160, 631, 963, 1346, 1441
Sau96I	GGNCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
SchI	GAGTC	5 cut(s)	675, 888, 1216, 1250, 1600
SduI	GDGCHC	2 cut(s)	46, 571
SexAI	ACCWGGT	2 cut(s)	148, 1801
SfaNI	GCATC	3 cut(s)	1061, 1287, 1625
SfcI	CTRYAG	1 cut(s)	543
SinI	GGWCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
SmiMI	CAYNNNNRTG	1 cut(s)	1544
SmlI	CTYRAG	1 cut(s)	866
SmoI	CTYRAG	1 cut(s)	866
Sse9I	AATT	7 cut(s)	10, 528, 704, 1069, 1116, 1267, 1501
SseBI	AGGCCT	1 cut(s)	383
SsiI	CCGC	6 cut(s)	261, 920, 1363, 1415, 1651, 1707
SspMI	CTAG	4 cut(s)	1032, 1226, 1511, 1926
StuI	AGGCCT	1 cut(s)	383
StyI	CCWWGG	4 cut(s)	208, 1031, 1204, 1903
TaaI	ACNGT	5 cut(s)	293, 367, 1475, 1665, 1894
TaiI	ACGT	5 cut(s)	501, 655, 1402, 1422, 1495
TaqI	TCGA	6 cut(s)	82, 202, 223, 402, 1609, 1702
TasI	AATT	7 cut(s)	10, 528, 704, 1069, 1116, 1267, 1501
TfiI	GAWTC	4 cut(s)	32, 900, 1145, 1691
Tru1I	TTAA	5 cut(s)	348, 372, 435, 854, 1115
Tru9I	TTAA	5 cut(s)	348, 372, 435, 854, 1115
TscAI	CASTG	4 cut(s)	370, 1024, 1347, 1563
TseFI	GTSAC	2 cut(s)	1317, 1676
TseI	GCWGC	4 cut(s)	517, 542, 593, 1394
Tsp45I	GTSAC	2 cut(s)	1317, 1676
TspDTI	ATGAA	7 cut(s)	402, 641, 741, 1130, 1169, 1295, 1617
TspGWI	ACGGA	4 cut(s)	66, 792, 1124, 1806
TspRI	CASTG	4 cut(s)	370, 1024, 1347, 1563
Tth111I	GACNNNGTC	1 cut(s)	1466
Van91I	CCANNNNNTGG	3 cut(s)	53, 1168, 1808
VpaK11BI	GGWCC	7 cut(s)	251, 289, 1171, 1591, 1793, 1874, 1913
XagI	CCTNNNNNAGG	1 cut(s)	1902
XapI	RAATTY	2 cut(s)	10, 1501
XceI	RCATGY	1 cut(s)	985
XcmI	CCANNNNNNNNNTGG	2 cut(s)	215, 1193
XmaJI	CCTAGG	1 cut(s)	1031
XmnI	GAANNNNTTC	1 cut(s)	393
XspI	CTAG	4 cut(s)	1032, 1226, 1511, 1926

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.