Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Forward (+)

24300391 .. 24305090

Gene Structure 4700 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG252000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGAGGTCATGGGCAGATTCTGTAGGTAATGATGGAGACAATGCAGACGCCGGTTCGTCTGAAAATAACAGCTCATCTCGTCCATCTGACAATAACAAATCATCGCGTCCATCTGAAAATAGAAGCTCATCGCGCCCGTCTGACAATAGCAGCTCATCTCGTCCTGCACGATCAACTTATGTTCCGCCACATCTTCGTAATAGGCCTCCGTCTGCTGATCCTCCGGCTCCTTCACAGACTACCCTGCCACCAGCCAATGTAGGTTATAATGGGCCTGCAGCTGGGTCTGCCTGGGGCGGTGGTGGTGGTTTTAGGTCTGATGTTGGGCGTGGGGGATATGTAGGTGGTGGTGGTGGCGGTGGTCGAGGTGGTGGTGGTTGGAACAATAGAAGTGGAGGGTGGGACCGTGGGAGGGAACGGGAGGTAAATCCCTTTGCTGATGACGATAACACAGAACAGCCCTTTGAGCAAGAAAACACAGGCATCAACTTTGATGCTTATGAGGATATCCCAGTTGAAACTAGTGGATCTGATGTCCCGCCACCTGTGAATACTTTTGCAGAGATAGATCTAGGGGACGCATTGAATTTAAATATTAGGAGATGCAAGTATGTGAGGCCAACTCCTGTTCAGCGTCATGCAATACCGATCTCTCTTGCAGGACGAGATTTGATGGCCTGTGCTCAGACAGGTTCTGGCAAGACAGCTGCTTTCTGCTTTCCAATTATTAGTGGGATCATGCAGGGGCAGTATGCTCAGAGACCTCGTGGAGCACGTACTGTCTATCCTCTTGCTCTTATTCTCTCCCCTACTAGAGAACTCTCGTGTCAGATACATGAAGAAGCTAGAAAGTTTTCTTATCAAACTGGTGTCAAGGTGGTAGTTGCTTACGGAGGAGCGCCAATAAACCAACAGTTGAGAGAGCTTGAAAGAGGAGTAGATATTCTTGTGGCAACTCCGGGTCGATTGGTAGATCTGCTTGAGAGAGCTAGAGTATCATTGCAGATGATACAATATTTGGCTCTTGATGAGGCAGATCGGATGCTGGACATGGGTTTTGAGCCTCAAATTAGGAAGATAGTGGAACAGATGGACATGCCTCCACCAGGTTTGAGACAGACCATGCTGTTCAGTGCAACCTTTCCGAAGGAGATACAGAGACTGGCGTCGGATTTTCTGGCAAACTATATATTTTTGGCTGTTGGAAGGGTTGGCTCAAGTACTGATTTAATTGTTCAAAGAGTTGAATTTGTTCATGAATCTGATAAGAGAAGTCATCTCATGGACCTCCTTCACGCACAAAGGGAAAATGGAACTCATGGCAAGCAAGCTTTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCAGATGCGCTGGAACACTGGTTGTGTATTAATGGGTTTCCGGCAACTACTATTCATGGTGACAGAACACAACAGGAAAGAGAACAGGCACTGAGATCATTCAAGAGTGGACATACACCAATTTTAGTGGCAACAGATGTGGCTGCACGTGGTCTGGACATTCCCCATGTAGCTCACGTGGTAAATTTTGATCTTCCAAATGACATTGATGATTATGTTCACCGGATAGGTCGGACAGGGCGAGCTGGAAAATCAGGACTTGCAACAGCATTCTTTAATGAGAACAACCTTTCGATGGCAAAACCACTAGCTGATCTAATGCAAGAAGCAAATCAGGAAGTGCCTGCTTGGATTACTCGATACGCATCGAGGGCTTCTTATGGTGGTGGTAGAAACCGGCGATCTGGGGGAGGCCGTTTTGGAGGCCGTGACTTCAGAAGGGAGAATTCTTTCAACAGGGGTTCAGATTTCTATGGAGGGGGAAATAATGGCGGCGGATATGGTGGCGGCGGCTATGGTGGTGGCGGCGGCTATGGTGGTGGCGGCGGCTATGGTGGTGGGGGTTATGGCGGTGGTACTGGTCCTAGTGCTTGGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

654

Amino Acids

70.09

Weight (kDa)

6.91

Isoelectric Point (pI)

47.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	208 - 387	1.2e-48	DEAD/DEAH box helicase
Helicase_C	PF00271	423 - 538	1.7e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	267
AccII	CGCG	2 cut(s)	106, 133
AclWI	GGATC	3 cut(s)	212, 535, 743
AcsI	RAATTY	4 cut(s)	586, 1247, 1549, 1810
AcuI	CTGAAG	1 cut(s)	1783
AcvI	CACGTG	2 cut(s)	1514, 1543
AcyI	GRCGYC	2 cut(s)	48, 1166
AfaI	GTAC	3 cut(s)	778, 1222, 1942
AfiI	CCNNNNNNNGG	4 cut(s)	281, 412, 1106, 1660
AgsI	TTSAA	7 cut(s)	518, 586, 929, 1238, 1247, 1468, 1819
AhlI	ACTAGT	1 cut(s)	521
AjnI	CCWGG	2 cut(s)	290, 1105
Alw21I	GWGCWC	2 cut(s)	685, 775
Alw26I	GTCTC	5 cut(s)	30, 754, 1108, 1153, 1346
AlwI	GGATC	3 cut(s)	212, 535, 743
AlwNI	CAGNNNCTG	4 cut(s)	20, 695, 1162, 1456
AoxI	GGCC	6 cut(s)	203, 272, 617, 675, 1777, 1789
ApeKI	GCWGC	4 cut(s)	150, 278, 707, 1508
ApoI	RAATTY	4 cut(s)	586, 1247, 1549, 1810
ArsI	GACNNNNNNTTYG	2 cut(s)	1040, 1072
AseI	ATTAAT	1 cut(s)	1395
Asp700I	GAANNNNTTC	3 cut(s)	853, 1251, 1814
AspLEI	GCGC	3 cut(s)	135, 901, 1375
AspS9I	GGNCC	4 cut(s)	272, 403, 1285, 1946
AsuC2I	CCSGG	1 cut(s)	960
AsuHPI	GGTGA	2 cut(s)	1436, 1577
AvaII	GGWCC	3 cut(s)	403, 1285, 1946
BauI	CACGAG	2 cut(s)	765, 823
BbrPI	CACGTG	2 cut(s)	1514, 1543
Bbv12I	GWGCWC	2 cut(s)	685, 775
BbvI	GCAGC	4 cut(s)	162, 290, 694, 1495
BccI	CCATC	6 cut(s)	26, 91, 118, 667, 1084, 1654
BceAI	ACGGC	2 cut(s)	1764, 1776
BciT130I	CCWGG	2 cut(s)	292, 1107
BcnI	CCSGG	1 cut(s)	960
BcoDI	GTCTC	5 cut(s)	30, 754, 1108, 1153, 1346
BcuI	ACTAGT	1 cut(s)	521
BfaI	CTAG	8 cut(s)	522, 572, 813, 846, 990, 1673, 1950, 1963
BfmI	CTRYAG	2 cut(s)	21, 276
BfoI	RGCGCY	1 cut(s)	902
BglII	AGATCT	2 cut(s)	568, 973
BmcAI	AGTACT	1 cut(s)	1222
Bme1390I	CCNGG	3 cut(s)	292, 960, 1107
Bme18I	GGWCC	3 cut(s)	403, 1285, 1946
BmgT120I	GGNCC	4 cut(s)	272, 403, 1285, 1946
BmiI	GGNNCC	2 cut(s)	228, 404
BmrFI	CCNGG	3 cut(s)	292, 960, 1107
BmrI	ACTGGG	1 cut(s)	506
BmsI	GCATC	6 cut(s)	484, 492, 593, 1032, 1360, 1739
BmuI	ACTGGG	1 cut(s)	506
BoxI	GACNNNNGTC	1 cut(s)	1165
BplI	GAGNNNNNCTC	2 cut(s)	607, 639
BpuEI	CTTGAG	2 cut(s)	1001, 1201
BpuMI	CCSGG	1 cut(s)	960
BsaAI	YACGTR	3 cut(s)	776, 1514, 1543
BsaBI	GATNNNNATC	1 cut(s)	1729
BsaHI	GRCGYC	2 cut(s)	48, 1166
BsaI	GGTCTC	1 cut(s)	754
BsaJI	CCNNGG	2 cut(s)	291, 406
BsaWI	WCCGGW	1 cut(s)	1587
Bsc4I	CCNNNNNNNGG	4 cut(s)	281, 412, 1106, 1660
Bse118I	RCCGGY	2 cut(s)	50, 1761
Bse1I	ACTGG	5 cut(s)	512, 871, 1167, 1388, 1948
Bse3DI	GCAATG	1 cut(s)	998
Bse8I	GATNNNNATC	1 cut(s)	1729
BseBI	CCWGG	2 cut(s)	292, 1107
BseDI	CCNNGG	2 cut(s)	291, 406
BseGI	GGATG	1 cut(s)	1047
BseJI	GATNNNNATC	1 cut(s)	1729
BseLI	CCNNNNNNNGG	4 cut(s)	281, 412, 1106, 1660
BseMI	GCAATG	1 cut(s)	998
BseMII	CTCAG	3 cut(s)	698, 770, 1448
BseNI	ACTGG	5 cut(s)	512, 871, 1167, 1388, 1948
BseRI	GAGGAG	2 cut(s)	909, 948
BseXI	GCAGC	4 cut(s)	162, 290, 694, 1495
BseYI	CCCAGC	1 cut(s)	281
BsgI	GTGCAG	2 cut(s)	150, 1494
Bsh1236I	CGCG	2 cut(s)	106, 133
BshFI	GGCC	6 cut(s)	205, 274, 619, 677, 1779, 1791
BsiHKAI	GWGCWC	2 cut(s)	685, 775
BsiSI	CCGG	6 cut(s)	51, 224, 959, 1406, 1588, 1762
BslFI	GGGAC	3 cut(s)	416, 521, 590
BslI	CCNNNNNNNGG	4 cut(s)	281, 412, 1106, 1660
BsmAI	GTCTC	5 cut(s)	30, 754, 1108, 1153, 1346
BsmFI	GGGAC	3 cut(s)	416, 521, 590
BsmI	GAATGC	1 cut(s)	1634
BsnI	GGCC	6 cut(s)	205, 274, 619, 677, 1779, 1791
Bso31I	GGTCTC	1 cut(s)	754
Bsp1286I	GDGCHC	2 cut(s)	685, 775
BspANI	GGCC	6 cut(s)	205, 274, 619, 677, 1779, 1791
BspCNI	CTCAG	3 cut(s)	697, 769, 1449
BspFNI	CGCG	2 cut(s)	106, 133
BspHI	TCATGA	1 cut(s)	1255
BspLI	GGNNCC	2 cut(s)	228, 404
BspMAI	CTGCAG	1 cut(s)	280
BspPI	GGATC	3 cut(s)	212, 535, 743
BspTNI	GGTCTC	1 cut(s)	754
BsrDI	GCAATG	1 cut(s)	998
BsrFI	RCCGGY	2 cut(s)	50, 1761
BsrI	ACTGG	5 cut(s)	512, 871, 1167, 1388, 1948
BssAI	RCCGGY	2 cut(s)	50, 1761
BssECI	CCNNGG	2 cut(s)	291, 406
BssNI	GRCGYC	2 cut(s)	48, 1166
BssSI	CACGAG	2 cut(s)	765, 823
Bst2BI	CACGAG	2 cut(s)	765, 823
Bst2UI	CCWGG	2 cut(s)	292, 1107
Bst4CI	ACNGT	3 cut(s)	407, 781, 915
BstACI	GRCGYC	2 cut(s)	48, 1166
BstBAI	YACGTR	3 cut(s)	776, 1514, 1543
BstC8I	GCNNGC	5 cut(s)	276, 1325, 1329, 1608, 1710
BstDEI	CTNAG	3 cut(s)	684, 756, 1457
BstDSI	CCRYGG	1 cut(s)	406
BstENI	CCTNNNNNAGG	1 cut(s)	1104
BstF5I	GGATG	1 cut(s)	1047
BstFNI	CGCG	2 cut(s)	106, 133
BstH2I	RGCGCY	1 cut(s)	902
BstHHI	GCGC	3 cut(s)	135, 901, 1375
BstMAI	GTCTC	5 cut(s)	30, 754, 1108, 1153, 1346
BstMWI	GCNNNNNNNGC	4 cut(s)	132, 287, 466, 1736
BstNI	CCWGG	2 cut(s)	292, 1107
BstNSI	RCATGY	1 cut(s)	1099
BstPAI	GACNNNNGTC	1 cut(s)	1165
BstSCI	CCNGG	3 cut(s)	290, 958, 1105
BstSFI	CTRYAG	2 cut(s)	21, 276
BstUI	CGCG	2 cut(s)	106, 133
BstV1I	GCAGC	4 cut(s)	162, 290, 694, 1495
BstX2I	RGATCY	3 cut(s)	527, 568, 973
BstYI	RGATCY	3 cut(s)	527, 568, 973
BsuRI	GGCC	6 cut(s)	205, 274, 619, 677, 1779, 1791
BtgI	CCRYGG	1 cut(s)	406
BtgZI	GCGATG	2 cut(s)	87, 114
BtsCI	GGATG	1 cut(s)	1047
BtsIMutI	CAGTG	3 cut(s)	1138, 1381, 1454
Cac8I	GCNNGC	5 cut(s)	276, 1325, 1329, 1608, 1710
CaiI	CAGNNNCTG	4 cut(s)	20, 695, 1162, 1456
CciI	TCATGA	1 cut(s)	1255
CfoI	GCGC	3 cut(s)	135, 901, 1375
Cfr10I	RCCGGY	2 cut(s)	50, 1761
Cfr13I	GGNCC	4 cut(s)	272, 403, 1285, 1946
CseI	GACGC	5 cut(s)	56, 95, 587, 623, 1155
CsiI	ACCWGGT	1 cut(s)	1105
Csp6I	GTAC	3 cut(s)	777, 1221, 1941
CspCI	CAANNNNNGTGG	8 cut(s)	373, 408, 1092, 1127, 1473, 1485, 1508, 1520
CviQI	GTAC	3 cut(s)	777, 1221, 1941
DdeI	CTNAG	3 cut(s)	684, 756, 1457
DraI	TTTAAA	1 cut(s)	591
EciI	GGCGGA	2 cut(s)	174, 1875
Eco147I	AGGCCT	1 cut(s)	205
Eco31I	GGTCTC	1 cut(s)	754
Eco32I	GATATC	1 cut(s)	508
Eco47I	GGWCC	3 cut(s)	403, 1285, 1946
Eco57I	CTGAAG	1 cut(s)	1783
Eco72I	CACGTG	2 cut(s)	1514, 1543
EcoNI	CCTNNNNNAGG	1 cut(s)	1104
EcoRI	GAATTC	1 cut(s)	1810
EcoRII	CCWGG	2 cut(s)	290, 1105
EcoRV	GATATC	1 cut(s)	508
FaqI	GGGAC	3 cut(s)	416, 521, 590
FauI	CCCGC	1 cut(s)	546
FokI	GGATG	1 cut(s)	1054
FspBI	CTAG	8 cut(s)	522, 572, 813, 846, 990, 1673, 1950, 1963
GlaI	GCGC	3 cut(s)	134, 900, 1374
GsaI	CCCAGC	1 cut(s)	285
HaeII	RGCGCY	1 cut(s)	902
HaeIII	GGCC	6 cut(s)	205, 274, 619, 677, 1779, 1791
HapII	CCGG	6 cut(s)	51, 224, 959, 1406, 1588, 1762
HgaI	GACGC	5 cut(s)	56, 95, 587, 623, 1155
HhaI	GCGC	3 cut(s)	135, 901, 1375
Hin1I	GRCGYC	2 cut(s)	48, 1166
Hin6I	GCGC	3 cut(s)	133, 899, 1373
HinP1I	GCGC	3 cut(s)	133, 899, 1373
HindIII	AAGCTT	1 cut(s)	1329
HinfI	GANTC	2 cut(s)	17, 1259
HpaII	CCGG	6 cut(s)	51, 224, 959, 1406, 1588, 1762
HphI	GGTGA	2 cut(s)	1436, 1577
Hpy166II	GTNNAC	2 cut(s)	1475, 1585
Hpy188III	TCNNGA	6 cut(s)	1025, 1256, 1468, 1520, 1620, 1700
Hpy8I	GTNNAC	2 cut(s)	1475, 1585
Hpy99I	CGWCG	1 cut(s)	1171
HpyAV	CCTTC	6 cut(s)	240, 1141, 1200, 1301, 1354, 1797
HpyCH4III	ACNGT	3 cut(s)	407, 781, 915
HpyCH4IV	ACGT	3 cut(s)	775, 1513, 1542
HpyF10VI	GCNNNNNNNGC	4 cut(s)	132, 287, 466, 1736
HpyF3I	CTNAG	3 cut(s)	684, 756, 1457
HpySE526I	ACGT	3 cut(s)	775, 1513, 1542
Hsp92I	GRCGYC	2 cut(s)	48, 1166
HspAI	GCGC	3 cut(s)	133, 899, 1373
LmnI	GCTCC	4 cut(s)	232, 770, 896, 1364
Lsp1109I	GCAGC	4 cut(s)	162, 290, 694, 1495
LweI	GCATC	6 cut(s)	484, 492, 593, 1032, 1360, 1739
MabI	ACCWGGT	1 cut(s)	1105
MaeI	CTAG	8 cut(s)	522, 572, 813, 846, 990, 1673, 1950, 1963
MaeII	ACGT	3 cut(s)	775, 1513, 1542
MaeIII	GTNAC	2 cut(s)	1424, 1793
MboII	GAAGA	4 cut(s)	185, 851, 1087, 1550
MflI	RGATCY	3 cut(s)	527, 568, 973
MhlI	GDGCHC	2 cut(s)	685, 775
MluCI	AATT	8 cut(s)	586, 723, 1068, 1230, 1247, 1485, 1549, 1810
MmeI	TCCRAC	4 cut(s)	359, 1149, 1183, 1577
MroXI	GAANNNNTTC	3 cut(s)	853, 1251, 1814
MseI	TTAA	4 cut(s)	590, 1229, 1395, 1641
MspA1I	CMGCKG	2 cut(s)	281, 707
MspI	CCGG	6 cut(s)	51, 224, 959, 1406, 1588, 1762
MspR9I	CCNGG	3 cut(s)	292, 960, 1107
Mva1269I	GAATGC	1 cut(s)	1634
MvaI	CCWGG	2 cut(s)	292, 1107
MvnI	CGCG	2 cut(s)	106, 133
MwoI	GCNNNNNNNGC	4 cut(s)	132, 287, 466, 1736
NciI	CCSGG	1 cut(s)	960
NlaIV	GGNNCC	2 cut(s)	228, 404
NmuCI	GTSAC	2 cut(s)	1424, 1793
NspI	RCATGY	1 cut(s)	1099
PagI	TCATGA	1 cut(s)	1255
PceI	AGGCCT	1 cut(s)	205
PcsI	WCGNNNNNNNCGW	3 cut(s)	166, 772, 1603
PctI	GAATGC	1 cut(s)	1634
PdmI	GAANNNNTTC	3 cut(s)	853, 1251, 1814
PfeI	GAWTC	2 cut(s)	17, 1259
PmaCI	CACGTG	2 cut(s)	1514, 1543
PmlI	CACGTG	2 cut(s)	1514, 1543
Ppu21I	YACGTR	3 cut(s)	776, 1514, 1543
PshAI	GACNNNNGTC	1 cut(s)	1165
PshBI	ATTAAT	1 cut(s)	1395
PsiI	TTATAA	1 cut(s)	267
Psp6I	CCWGG	2 cut(s)	290, 1105
PspCI	CACGTG	2 cut(s)	1514, 1543
PspFI	CCCAGC	1 cut(s)	281
PspGI	CCWGG	2 cut(s)	290, 1105
PspN4I	GGNNCC	2 cut(s)	228, 404
PspPI	GGNCC	4 cut(s)	272, 403, 1285, 1946
PstI	CTGCAG	1 cut(s)	280
PstNI	CAGNNNCTG	4 cut(s)	20, 695, 1162, 1456
PsuI	RGATCY	3 cut(s)	527, 568, 973
PvuII	CAGCTG	2 cut(s)	281, 707
RsaI	GTAC	3 cut(s)	778, 1222, 1942
RsaNI	GTAC	3 cut(s)	777, 1221, 1941
SaqAI	TTAA	4 cut(s)	590, 1229, 1395, 1641
Sau96I	GGNCC	4 cut(s)	272, 403, 1285, 1946
ScaI	AGTACT	1 cut(s)	1222
ScrFI	CCNGG	3 cut(s)	292, 960, 1107
SduI	GDGCHC	2 cut(s)	685, 775
SexAI	ACCWGGT	1 cut(s)	1105
SfaNI	GCATC	6 cut(s)	484, 492, 593, 1032, 1360, 1739
SfcI	CTRYAG	2 cut(s)	21, 276
SinI	GGWCC	3 cut(s)	403, 1285, 1946
SmiI	ATTTAAAT	1 cut(s)	591
SmlI	CTYRAG	2 cut(s)	980, 1216
SmoI	CTYRAG	2 cut(s)	980, 1216
SpeI	ACTAGT	1 cut(s)	521
Sse9I	AATT	8 cut(s)	586, 723, 1068, 1230, 1247, 1485, 1549, 1810
SseBI	AGGCCT	1 cut(s)	205
SspI	AATATT	2 cut(s)	595, 1016
SspMI	CTAG	8 cut(s)	522, 572, 813, 846, 990, 1673, 1950, 1963
StuI	AGGCCT	1 cut(s)	205
StyD4I	CCNGG	3 cut(s)	290, 958, 1105
SwaI	ATTTAAAT	1 cut(s)	591
TaaI	ACNGT	3 cut(s)	407, 781, 915
TaiI	ACGT	3 cut(s)	778, 1516, 1545
TaqI	TCGA	5 cut(s)	364, 964, 1658, 1723, 1733
TasI	AATT	8 cut(s)	586, 723, 1068, 1230, 1247, 1485, 1549, 1810
TatI	WGTACW	1 cut(s)	1220
TauI	GCSGC	7 cut(s)	1860, 1875, 1878, 1893, 1896, 1911, 1914
TfiI	GAWTC	2 cut(s)	17, 1259
Tru1I	TTAA	4 cut(s)	590, 1229, 1395, 1641
Tru9I	TTAA	4 cut(s)	590, 1229, 1395, 1641
TscAI	CASTG	3 cut(s)	1138, 1388, 1461
TseFI	GTSAC	2 cut(s)	1424, 1793
TseI	GCWGC	4 cut(s)	150, 278, 707, 1508
Tsp45I	GTSAC	2 cut(s)	1424, 1793
TspDTI	ATGAA	4 cut(s)	852, 1244, 1272, 1409
TspGWI	ACGGA	2 cut(s)	198, 906
TspRI	CASTG	3 cut(s)	1138, 1388, 1461
VpaK11BI	GGWCC	3 cut(s)	403, 1285, 1946
VspI	ATTAAT	1 cut(s)	1395
XagI	CCTNNNNNAGG	1 cut(s)	1104
XapI	RAATTY	4 cut(s)	586, 1247, 1549, 1810
XceI	RCATGY	1 cut(s)	1099
XmnI	GAANNNNTTC	3 cut(s)	853, 1251, 1814
XspI	CTAG	8 cut(s)	522, 572, 813, 846, 990, 1673, 1950, 1963
ZrmI	AGTACT	1 cut(s)	1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.