Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Reverse (-)

3358955 .. 3360684

Gene Structure 1730 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG041900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 984 bp

ATGAGCCTGAGGACGATGGCTTGGGCCGAAGCGGTGACCGAGTCCGCCCGGAAGCAAACTCGCCCACTTCCCCCGCCGCGCAACACTACCTACTTGCCTCCGCATCTTCGCTACTCCGGCGGCGGCGGCGGCGATGGTGGTGGTTACAGCTCCTACGGCCGTGGCTCTAGTGAGTCGGCTCAGTACGGTTTTGGTGGTGGTGGTTACAGGGGAGGCGGCCGGAGCGGTCCGGGTCGCGACGGAGGACGAGGAGGTCGTCGTGGTGGTGGTGGTGGCCGGAGTCGAGGTTGGGTGCAGACGCCGAGGCCGAACAGGGACGCGTTTCATGACGTGTCCGGGAAATTTGAGCAGCTGAAAGTGAGGGAGGGGGATGACGTCGGCAATGTGGGTATAAATTTCGATGCTTACGAGGATATTCCGGTGGAGGCGAGCGGCGAGGACGTGCCGGCGCCGGCGAGCACTTTTGGGGAGATTGATTTGGGGGAGTGCTTGAACAACAACATCAAGAGGTGTAGGTACGTGAAGCCGACGCCGGTTCAGCGCCACGCGATTCCGATAGCCATGGCCGGCCGGGACTTGATGGCTTGTGCTCAGACCGGGTCCGGAAAGACGGCGGCTTTTTGCTTCCCCATTATCAGTGGAGTGTTGACTAAGTGTGTGGAGAGGTCTCAGAGTAATGGGGATGGTTGGACTGTGTTCCCCAGAGCTCTCATTTTGTCTCCGACGAGAGAGTTGGCTAGTCAGCTTCGTGATTTGGAGAGAGGTGTTGATATCCTAGTCGCCACTCCAGAGCGCTTAGTGGACATGATTGAAAGGTCACGAGTTTCACTCAAGATGATCAAATACTTGGCACTAGATGAGGCTGATAGGATGTTGGACATGGGTTTTGAACCTCAAAGAAGGAAGATAGTTCAAAGAATGGACATGCCTCCCCCAGGTGCAAGAGTGCGATGCACGATAGGAACAAGAAGGCGATGGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

327

Amino Acids

35.5

Weight (kDa)

9.66

Isoelectric Point (pI)

57.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	177 - 249	6.4e-16	DEAD/DEAH box helicase
DEAD	PF00270	248 - 310	8.1e-14	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	252
AatII	GACGTC	1 cut(s)	378
AccB1I	GGYRCC	1 cut(s)	448
AccBSI	CCGCTC	2 cut(s)	225, 432
AccII	CGCG	4 cut(s)	79, 237, 320, 548
AccIII	TCCGGA	1 cut(s)	602
AcoI	YGGCCR	5 cut(s)	157, 217, 274, 564, 568
AcsI	RAATTY	2 cut(s)	341, 394
AcyI	GRCGYC	4 cut(s)	299, 375, 449, 530
AfaI	GTAC	2 cut(s)	185, 518
AfeI	AGCGCT	1 cut(s)	794
AfiI	CCNNNNNNNGG	1 cut(s)	935
AflIII	ACRYGT	2 cut(s)	318, 330
AgsI	TTSAA	4 cut(s)	493, 812, 890, 914
AjiI	CACGTC	2 cut(s)	331, 442
AjnI	CCWGG	1 cut(s)	934
AluBI	AGCT	4 cut(s)	150, 352, 707, 745
AluI	AGCT	4 cut(s)	150, 352, 707, 745
Alw21I	GWGCWC	3 cut(s)	461, 592, 709
Alw26I	GTCTC	2 cut(s)	672, 723
Aor13HI	TCCGGA	1 cut(s)	602
Aor51HI	AGCGCT	1 cut(s)	794
AoxI	GGCC	7 cut(s)	24, 157, 217, 274, 305, 564, 568
ApeKI	GCWGC	1 cut(s)	349
ApoI	RAATTY	2 cut(s)	341, 394
ArsI	GACNNNNNNTTYG	2 cut(s)	869, 901
AspLEI	GCGC	4 cut(s)	81, 451, 543, 795
AspS9I	GGNCC	3 cut(s)	24, 227, 600
AsuC2I	CCSGG	5 cut(s)	49, 231, 337, 572, 598
AsuHPI	GGTGA	1 cut(s)	46
AvaII	GGWCC	2 cut(s)	227, 600
AxyI	CCTNAGG	1 cut(s)	8
BanI	GGYRCC	1 cut(s)	448
BanII	GRGCYC	1 cut(s)	709
BauI	CACGAG	1 cut(s)	819
Bbv12I	GWGCWC	3 cut(s)	461, 592, 709
BbvI	GCAGC	1 cut(s)	361
BccI	CCATC	5 cut(s)	10, 128, 574, 677, 969
BceAI	ACGGC	3 cut(s)	144, 172, 627
BciT130I	CCWGG	1 cut(s)	936
BclI	TGATCA	1 cut(s)	837
BcnI	CCSGG	5 cut(s)	49, 231, 337, 572, 598
BcoDI	GTCTC	2 cut(s)	672, 723
BfaI	CTAG	4 cut(s)	168, 738, 776, 854
BfoI	RGCGCY	3 cut(s)	452, 544, 796
BisI	GCNGC	9 cut(s)	77, 121, 124, 127, 130, 217, 350, 433, 615
BlsI	GCNGC	9 cut(s)	78, 122, 125, 128, 131, 218, 351, 434, 616
Bme1390I	CCNGG	6 cut(s)	49, 231, 337, 572, 598, 936
Bme18I	GGWCC	2 cut(s)	227, 600
BmgBI	CACGTC	2 cut(s)	331, 442
BmgT120I	GGNCC	3 cut(s)	24, 227, 600
BmiI	GGNNCC	2 cut(s)	450, 601
BmrFI	CCNGG	6 cut(s)	49, 231, 337, 572, 598, 936
BmsI	GCATC	3 cut(s)	112, 391, 941
BplI	GAGNNNNNCTC	2 cut(s)	813, 845
BpmI	CTGGAG	1 cut(s)	771
BpuEI	CTTGAG	1 cut(s)	815
BpuMI	CCSGG	5 cut(s)	49, 231, 337, 572, 598
BsaAI	YACGTR	1 cut(s)	520
BsaHI	GRCGYC	4 cut(s)	299, 375, 449, 530
BsaI	GGTCTC	1 cut(s)	672
BsaJI	CCNNGG	4 cut(s)	160, 302, 561, 934
BsaWI	WCCGGW	2 cut(s)	418, 602
BsaXI	ACNNNNNCTCC	2 cut(s)	271, 301
Bsc4I	CCNNNNNNNGG	1 cut(s)	935
Bse118I	RCCGGY	4 cut(s)	445, 451, 532, 566
Bse21I	CCTNAGG	1 cut(s)	8
Bse3DI	GCAATG	1 cut(s)	388
BseAI	TCCGGA	1 cut(s)	602
BseBI	CCWGG	1 cut(s)	936
BseDI	CCNNGG	4 cut(s)	160, 302, 561, 934
BseGI	GGATG	3 cut(s)	376, 688, 876
BseLI	CCNNNNNNNGG	1 cut(s)	935
BseMI	GCAATG	1 cut(s)	388
BseMII	CTCAG	3 cut(s)	194, 605, 683
BseRI	GAGGAG	1 cut(s)	264
BseX3I	CGGCCG	3 cut(s)	157, 217, 568
BseXI	GCAGC	1 cut(s)	361
BsgI	GTGCAG	1 cut(s)	314
Bsh1236I	CGCG	4 cut(s)	79, 237, 320, 548
Bsh1285I	CGRYCG	3 cut(s)	160, 220, 571
BshFI	GGCC	7 cut(s)	26, 159, 219, 276, 307, 566, 570
BshNI	GGYRCC	1 cut(s)	448
BsiEI	CGRYCG	3 cut(s)	160, 220, 571
BsiHKAI	GWGCWC	3 cut(s)	461, 592, 709
BslFI	GGGAC	2 cut(s)	329, 587
BslI	CCNNNNNNNGG	1 cut(s)	935
BsmAI	GTCTC	2 cut(s)	672, 723
BsmFI	GGGAC	2 cut(s)	329, 587
BsnI	GGCC	7 cut(s)	26, 159, 219, 276, 307, 566, 570
Bso31I	GGTCTC	1 cut(s)	672
Bsp1286I	GDGCHC	3 cut(s)	461, 592, 709
Bsp13I	TCCGGA	1 cut(s)	602
Bsp143I	GATC	1 cut(s)	837
Bsp19I	CCATGG	1 cut(s)	561
Bsp68I	TCGCGA	1 cut(s)	237
BspANI	GGCC	7 cut(s)	26, 159, 219, 276, 307, 566, 570
BspCNI	CTCAG	3 cut(s)	193, 604, 682
BspEI	TCCGGA	1 cut(s)	602
BspFNI	CGCG	4 cut(s)	79, 237, 320, 548
BspHI	TCATGA	1 cut(s)	325
BspLI	GGNNCC	2 cut(s)	450, 601
BspT107I	GGYRCC	1 cut(s)	448
BspTNI	GGTCTC	1 cut(s)	672
BsrBI	CCGCTC	2 cut(s)	225, 432
BsrDI	GCAATG	1 cut(s)	388
BsrFI	RCCGGY	4 cut(s)	445, 451, 532, 566
BssAI	RCCGGY	4 cut(s)	445, 451, 532, 566
BssECI	CCNNGG	4 cut(s)	160, 302, 561, 934
BssMI	GATC	1 cut(s)	837
BssNI	GRCGYC	4 cut(s)	299, 375, 449, 530
BssSI	CACGAG	1 cut(s)	819
BssT1I	CCWWGG	1 cut(s)	561
Bst2BI	CACGAG	1 cut(s)	819
Bst2UI	CCWGG	1 cut(s)	936
Bst4CI	ACNGT	2 cut(s)	188, 694
BstACI	GRCGYC	4 cut(s)	299, 375, 449, 530
BstBAI	YACGTR	1 cut(s)	520
BstC8I	GCNNGC	5 cut(s)	430, 447, 453, 457, 568
BstDEI	CTNAG	6 cut(s)	8, 180, 591, 651, 669, 796
BstDSI	CCRYGG	2 cut(s)	160, 561
BstEII	GGTNACC	1 cut(s)	34
BstENI	CCTNNNNNAGG	1 cut(s)	933
BstF5I	GGATG	3 cut(s)	376, 688, 876
BstFNI	CGCG	4 cut(s)	79, 237, 320, 548
BstH2I	RGCGCY	3 cut(s)	452, 544, 796
BstHHI	GCGC	4 cut(s)	81, 451, 543, 795
BstKTI	GATC	1 cut(s)	840
BstMAI	GTCTC	2 cut(s)	672, 723
BstMBI	GATC	1 cut(s)	837
BstMCI	CGRYCG	3 cut(s)	160, 220, 571
BstMWI	GCNNNNNNNGC	6 cut(s)	117, 126, 129, 156, 222, 538
BstNI	CCWGG	1 cut(s)	936
BstNSI	RCATGY	1 cut(s)	928
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	6 cut(s)	47, 229, 335, 570, 596, 934
BstUI	CGCG	4 cut(s)	79, 237, 320, 548
BstV1I	GCAGC	1 cut(s)	361
BstZI	CGGCCG	3 cut(s)	157, 217, 568
Bsu36I	CCTNAGG	1 cut(s)	8
BsuRI	GGCC	7 cut(s)	26, 159, 219, 276, 307, 566, 570
BtgI	CCRYGG	2 cut(s)	160, 561
BtgZI	GCGATG	2 cut(s)	147, 964
BtrI	CACGTC	2 cut(s)	331, 442
BtsCI	GGATG	3 cut(s)	376, 688, 876
BtsIMutI	CAGTG	1 cut(s)	643
BtuMI	TCGCGA	1 cut(s)	237
Cac8I	GCNNGC	5 cut(s)	430, 447, 453, 457, 568
CciI	TCATGA	1 cut(s)	325
CfoI	GCGC	4 cut(s)	81, 451, 543, 795
Cfr10I	RCCGGY	4 cut(s)	445, 451, 532, 566
Cfr13I	GGNCC	3 cut(s)	24, 227, 600
CpoI	CGGWCCG	1 cut(s)	227
CseI	GACGC	3 cut(s)	307, 326, 538
Csp6I	GTAC	2 cut(s)	184, 517
CspI	CGGWCCG	1 cut(s)	227
CviAII	CATG	5 cut(s)	326, 562, 805, 880, 925
CviQI	GTAC	2 cut(s)	184, 517
DdeI	CTNAG	6 cut(s)	8, 180, 591, 651, 669, 796
DinI	GGCGCC	1 cut(s)	450
DpnI	GATC	1 cut(s)	839
DpnII	GATC	1 cut(s)	837
DrdI	GACNNNNNNGTC	1 cut(s)	252
DseDI	GACNNNNNNGTC	1 cut(s)	252
EaeI	YGGCCR	5 cut(s)	157, 217, 274, 564, 568
EagI	CGGCCG	3 cut(s)	157, 217, 568
EciI	GGCGGA	1 cut(s)	34
Ecl136II	GAGCTC	1 cut(s)	707
EclXI	CGGCCG	3 cut(s)	157, 217, 568
Eco130I	CCWWGG	1 cut(s)	561
Eco24I	GRGCYC	1 cut(s)	709
Eco31I	GGTCTC	1 cut(s)	672
Eco32I	GATATC	1 cut(s)	772
Eco47I	GGWCC	2 cut(s)	227, 600
Eco47III	AGCGCT	1 cut(s)	794
Eco52I	CGGCCG	3 cut(s)	157, 217, 568
Eco53kI	GAGCTC	1 cut(s)	707
Eco81I	CCTNAGG	1 cut(s)	8
Eco91I	GGTNACC	1 cut(s)	34
EcoICRI	GAGCTC	1 cut(s)	707
EcoNI	CCTNNNNNAGG	1 cut(s)	933
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	1 cut(s)	934
EcoRV	GATATC	1 cut(s)	772
EcoT14I	CCWWGG	1 cut(s)	561
EcoT38I	GRGCYC	1 cut(s)	709
EgeI	GGCGCC	1 cut(s)	450
EheI	GGCGCC	1 cut(s)	450
ErhI	CCWWGG	1 cut(s)	561
FaeI	CATG	5 cut(s)	329, 565, 808, 883, 928
FaiI	YATR	6 cut(s)	327, 392, 563, 806, 881, 926
FaqI	GGGAC	2 cut(s)	329, 587
FatI	CATG	5 cut(s)	325, 561, 804, 879, 924
FauI	CCCGC	1 cut(s)	81
FbaI	TGATCA	1 cut(s)	837
Fnu4HI	GCNGC	9 cut(s)	77, 121, 124, 127, 130, 217, 350, 433, 615
FokI	GGATG	3 cut(s)	383, 695, 883
FriOI	GRGCYC	1 cut(s)	709
FseI	GGCCGGCC	1 cut(s)	570
Fsp4HI	GCNGC	9 cut(s)	77, 121, 124, 127, 130, 217, 350, 433, 615
FspBI	CTAG	4 cut(s)	168, 738, 776, 854
GlaI	GCGC	4 cut(s)	80, 450, 542, 794
GluI	GCNGC	9 cut(s)	77, 121, 124, 127, 130, 217, 350, 433, 615
GsuI	CTGGAG	1 cut(s)	771
HaeII	RGCGCY	3 cut(s)	452, 544, 796
HaeIII	GGCC	7 cut(s)	26, 159, 219, 276, 307, 566, 570
HgaI	GACGC	3 cut(s)	307, 326, 538
HhaI	GCGC	4 cut(s)	81, 451, 543, 795
Hin1I	GRCGYC	4 cut(s)	299, 375, 449, 530
Hin1II	CATG	5 cut(s)	329, 565, 808, 883, 928
Hin6I	GCGC	4 cut(s)	79, 449, 541, 793
HinP1I	GCGC	4 cut(s)	79, 449, 541, 793
HincII	GTYRAC	1 cut(s)	648
HindII	GTYRAC	1 cut(s)	648
HinfI	GANTC	4 cut(s)	41, 173, 280, 550
HphI	GGTGA	1 cut(s)	46
Hpy166II	GTNNAC	2 cut(s)	648, 802
Hpy188I	TCNGA	4 cut(s)	555, 594, 672, 723
Hpy188III	TCNNGA	8 cut(s)	236, 326, 505, 603, 749, 788, 819, 832
Hpy8I	GTNNAC	2 cut(s)	648, 802
Hpy99I	CGWCG	5 cut(s)	242, 261, 380, 532, 727
HpyAV	CCTTC	2 cut(s)	894, 963
HpyCH4III	ACNGT	2 cut(s)	188, 694
HpyCH4IV	ACGT	4 cut(s)	330, 375, 441, 519
HpyCH4V	TGCA	3 cut(s)	295, 941, 954
HpyF10VI	GCNNNNNNNGC	6 cut(s)	117, 126, 129, 156, 222, 538
HpyF3I	CTNAG	6 cut(s)	8, 180, 591, 651, 669, 796
HpySE526I	ACGT	4 cut(s)	330, 375, 441, 519
Hsp92I	GRCGYC	4 cut(s)	299, 375, 449, 530
Hsp92II	CATG	5 cut(s)	329, 565, 808, 883, 928
HspAI	GCGC	4 cut(s)	79, 449, 541, 793
KasI	GGCGCC	1 cut(s)	448
Kpn2I	TCCGGA	1 cut(s)	602
KroI	GCCGGC	3 cut(s)	445, 451, 566
KroNI	GCCGGC	3 cut(s)	447, 453, 568
Ksp22I	TGATCA	1 cut(s)	837
Kzo9I	GATC	1 cut(s)	837
LmnI	GCTCC	2 cut(s)	155, 222
Lsp1109I	GCAGC	1 cut(s)	361
LweI	GCATC	3 cut(s)	112, 391, 941
MaeI	CTAG	4 cut(s)	168, 738, 776, 854
MaeII	ACGT	4 cut(s)	330, 375, 441, 519
MaeIII	GTNAC	4 cut(s)	34, 143, 203, 816
MalI	GATC	1 cut(s)	839
MbiI	CCGCTC	2 cut(s)	225, 432
MboI	GATC	1 cut(s)	837
MboII	GAAGA	2 cut(s)	98, 916
MhlI	GDGCHC	3 cut(s)	461, 592, 709
MluCI	AATT	2 cut(s)	341, 394
MluI	ACGCGT	1 cut(s)	318
Mly113I	GGCGCC	1 cut(s)	449
MlyI	GAGTC	3 cut(s)	50, 182, 289
MmeI	TCCRAC	3 cut(s)	668, 746, 855
MreI	CGCCGGCG	1 cut(s)	451
MroI	TCCGGA	1 cut(s)	602
MroNI	GCCGGC	3 cut(s)	445, 451, 566
MseI	TTAA	1 cut(s)	982
MspA1I	CMGCKG	1 cut(s)	352
MspR9I	CCNGG	6 cut(s)	49, 231, 337, 572, 598, 936
MvaI	CCWGG	1 cut(s)	936
MvnI	CGCG	4 cut(s)	79, 237, 320, 548
MwoI	GCNNNNNNNGC	6 cut(s)	117, 126, 129, 156, 222, 538
NaeI	GCCGGC	3 cut(s)	447, 453, 568
NarI	GGCGCC	1 cut(s)	449
NciI	CCSGG	5 cut(s)	49, 231, 337, 572, 598
NcoI	CCATGG	1 cut(s)	561
NdeII	GATC	1 cut(s)	837
NgoMIV	GCCGGC	3 cut(s)	445, 451, 566
NlaIII	CATG	5 cut(s)	329, 565, 808, 883, 928
NlaIV	GGNNCC	2 cut(s)	450, 601
NmeAIII	GCCGAG	1 cut(s)	327
NmuCI	GTSAC	2 cut(s)	34, 816
NruI	TCGCGA	1 cut(s)	237
NspI	RCATGY	1 cut(s)	928
PagI	TCATGA	1 cut(s)	325
PcsI	WCGNNNNNNNCGW	3 cut(s)	253, 305, 405
PdiI	GCCGGC	3 cut(s)	447, 453, 568
PfeI	GAWTC	1 cut(s)	550
PflFI	GACNNNGTC	2 cut(s)	40, 598
PfoI	TCCNGGA	1 cut(s)	335
PkrI	GCNGC	9 cut(s)	78, 122, 125, 128, 131, 218, 351, 434, 616
PleI	GAGTC	3 cut(s)	49, 181, 288
PluTI	GGCGCC	1 cut(s)	452
PpsI	GAGTC	3 cut(s)	49, 181, 288
Ppu21I	YACGTR	1 cut(s)	520
Psp124BI	GAGCTC	1 cut(s)	709
Psp6I	CCWGG	1 cut(s)	934
PspEI	GGTNACC	1 cut(s)	34
PspGI	CCWGG	1 cut(s)	934
PspN4I	GGNNCC	2 cut(s)	450, 601
PspPI	GGNCC	3 cut(s)	24, 227, 600
PsyI	GACNNNGTC	2 cut(s)	40, 598
PvuII	CAGCTG	1 cut(s)	352
RigI	GGCCGGCC	1 cut(s)	570
RruI	TCGCGA	1 cut(s)	237
RsaI	GTAC	2 cut(s)	185, 518
RsaNI	GTAC	2 cut(s)	184, 517
Rsr2I	CGGWCCG	1 cut(s)	227
RsrII	CGGWCCG	1 cut(s)	227
SacI	GAGCTC	1 cut(s)	709
SaqAI	TTAA	1 cut(s)	982
SatI	GCNGC	9 cut(s)	77, 121, 124, 127, 130, 217, 350, 433, 615
Sau3AI	GATC	1 cut(s)	837
Sau96I	GGNCC	3 cut(s)	24, 227, 600
SchI	GAGTC	3 cut(s)	50, 182, 289
ScrFI	CCNGG	6 cut(s)	49, 231, 337, 572, 598, 936
SduI	GDGCHC	3 cut(s)	461, 592, 709
SfaNI	GCATC	3 cut(s)	112, 391, 941
SfoI	GGCGCC	1 cut(s)	450
SgrAI	CRCCGGYG	1 cut(s)	451
SinI	GGWCC	2 cut(s)	227, 600
SmlI	CTYRAG	1 cut(s)	830
SmoI	CTYRAG	1 cut(s)	830
Sse9I	AATT	2 cut(s)	341, 394
SspDI	GGCGCC	1 cut(s)	448
SspMI	CTAG	4 cut(s)	168, 738, 776, 854
SstI	GAGCTC	1 cut(s)	709
StyD4I	CCNGG	6 cut(s)	47, 229, 335, 570, 596, 934
StyI	CCWWGG	1 cut(s)	561
TaaI	ACNGT	2 cut(s)	188, 694
TaiI	ACGT	4 cut(s)	333, 378, 444, 522
TaqI	TCGA	2 cut(s)	283, 399
TaqII	GACCGA	1 cut(s)	53
TasI	AATT	2 cut(s)	341, 394
TauI	GCSGC	8 cut(s)	79, 123, 126, 129, 132, 219, 435, 617
TfiI	GAWTC	1 cut(s)	550
Tru1I	TTAA	1 cut(s)	982
Tru9I	TTAA	1 cut(s)	982
TscAI	CASTG	1 cut(s)	643
TseFI	GTSAC	2 cut(s)	34, 816
TseI	GCWGC	1 cut(s)	349
Tsp45I	GTSAC	2 cut(s)	34, 816
TspDTI	ATGAA	1 cut(s)	314
TspGWI	ACGGA	1 cut(s)	255
TspRI	CASTG	1 cut(s)	643
Tth111I	GACNNNGTC	2 cut(s)	40, 598
VpaK11BI	GGWCC	2 cut(s)	227, 600
XagI	CCTNNNNNAGG	1 cut(s)	933
XapI	RAATTY	2 cut(s)	341, 394
XceI	RCATGY	1 cut(s)	928
XspI	CTAG	4 cut(s)	168, 738, 776, 854
ZraI	GACGTC	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.