Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG245100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGAGGTCATGGGCAGATTCTGTAGGTAATGATGGAGACAATGCAGACGCTGGTTCATCTGAAAATAACAGCTCATCTCGTCCATCTGACAATAACAAATCATCTCGTCCATCTGACAATAGAAGCTCATCGCGCCCGTCTGACAATAGCAGCTCATCTCGTCCTGCACGATCAACTTATGTTCCGCCACATCTTCGTAATAGGCCTCCGTCTGCTGATCCTCCGGCTCCTTCACAGACTACCCTGCCACCAGCCAATGTAGGTTATAATGGGCCTGCAGCTGGGTCTGCCTGGGGTGGTGGTGGTGGTTTTAGGTCTGATGTTGGGCGTGGGGGATATGTAGGTAGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCGAGGTGGTGGTGGTTGGAACAATAGAAGTGGAGGGTGGGACCGTGGGAGGGAACGGGAGGTAAATCCCTTTGCTGATGACGATAACACAGAACAGCCCTTTGAGCAAGAAAACACAGGCATCAACTTTGATGCTTATGAGGATATCCCAGTTGAAACTAGTGGATCTGATGTCCCGCCTCCTGTGAATACTTTTGCAGAGATAGATCTAGGGGACGCATTGAATTTAAATATTAGGAGATGCAAGTATGTGAGGCCAACTCCTGTTCAGCGTCATGCAATACCGATCTCTCTTGCAGGACGAGATTTGATGGCCTGTGCTCAGACAGGTTCTGGCAAGACAGCTGCTTTCTGCTTTCCAATTATTAGTGGGATCATGCAGGAGCAGTATGCTCAGAGACCTCGTGGAGCACGTACTGTGTATCCTCTTGCTCTTATTCTCTCCCCTACTAGAGAACTCTCGTGTCAGATACATGAAGAAGCTAGAAAGTTTTCTTATCAAACTGGTGTCAAGGTGGTAGTTGCTTACGGAGGAGCGCCAATAAACCAACAGTTGAGAGAGCTTGAAAGAGGAGTAGATATTCTTGTGGCAACTCCGGGTAGATTGGTAGATCTGCTTGAGAGAGCTAGAGTATCATTGCAGATGATACGATATTTGGCTCTTGATGAGGCAGATCGGATGCTGGACATGGGTTTTGAGCCTCAAATTAGGAAGATAGTGGAACAGATGGACATGCCTCCACCAGGTTTGAGACAGACCATGCTATTCAGTGCAACCTTTCCAAAGGAGATACAGAGACTGGCGTCGGATTTTCTGGCAAACTATATATTTTTGGCTGTTGGAAGGGTTGGCTCAAGTACTGATTTAATTGTTCAAAGAGTTGAATTTGTTCATGAATCTGATAAGAGAAGTCATCTCATGGACCTCCTTCACGCACAAAGGGAAAATGGAACTCATGGCAAGCAAGCTTTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCAGATGCACTGGAACACTGGTTGTGTATTAATGGGTTTCCGGCAACTACTATTCATGGTGACAGAACACAACAGGAAAGAGAACAGGCACTGAGATCATTCAAGAGTGGACATACACCAATTTTAGTGGCAACAGATGTGGCTGCACGTGGTCTGGACATTCCCCATGTAGCTCACGTGGTAAATTTTGATCTTCCAAATGACATTGATGATTATGTTCACCGGATAGGTCGGACAGGGCGAGCTGGAAAATCAGGACTTGCAACAGCATTCTTTAATGAGAACAACCTTTCGATGGCAAAACCACTAGCTGATCTAATGCAAGAAGCAAATCAGGAAGTGCCTGCTTGGATTACTCGATACGCATCGAGGGCTTCTTATGGTGGTGGTAGAAACCGGCGATCTGGGGGAGGCCGTTTTGGTGGCCGTGACTTCAGAAGGGAGAATTCTTTTAACAGGGGTTCAGATTTCTATGGAGGGGGAAATAATGGCGGTGGATATGGTGGCGGCGGCTATGGTGGTGGGGGTTATGGCGGTGGTACTGGTCCTAGTGCTTGGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

646

Amino Acids

69.54

Weight (kDa)

6.91

Isoelectric Point (pI)

47.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	212 - 391	9e-49	DEAD/DEAH box helicase
Helicase_C	PF00271	427 - 542	1.7e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	267
AccII	CGCG	1 cut(s)	133
AciI	CCGC	8 cut(s)	185, 363, 369, 551, 1869, 1884, 1887, 1911
AclWI	GGATC	3 cut(s)	212, 547, 755
AcoI	YGGCCR	1 cut(s)	1801
AcsI	RAATTY	4 cut(s)	598, 1259, 1561, 1822
AcuI	CTGAAG	1 cut(s)	1795
AcvI	CACGTG	2 cut(s)	1526, 1555
AcyI	GRCGYC	1 cut(s)	1178
AfaI	GTAC	3 cut(s)	790, 1234, 1918
AfiI	CCNNNNNNNGG	4 cut(s)	281, 424, 1118, 1672
AgsI	TTSAA	6 cut(s)	530, 598, 941, 1250, 1259, 1480
AhlI	ACTAGT	1 cut(s)	533
AjnI	CCWGG	2 cut(s)	290, 1117
Alw21I	GWGCWC	2 cut(s)	697, 787
Alw26I	GTCTC	5 cut(s)	30, 766, 1120, 1165, 1358
AlwI	GGATC	3 cut(s)	212, 547, 755
AlwNI	CAGNNNCTG	5 cut(s)	20, 50, 707, 1174, 1468
AoxI	GGCC	6 cut(s)	203, 272, 629, 687, 1789, 1801
ApeKI	GCWGC	4 cut(s)	150, 278, 719, 1520
ApoI	RAATTY	4 cut(s)	598, 1259, 1561, 1822
ArsI	GACNNNNNNTTYG	2 cut(s)	1052, 1084
AseI	ATTAAT	1 cut(s)	1407
Asp700I	GAANNNNTTC	2 cut(s)	865, 1263
AspLEI	GCGC	2 cut(s)	135, 913
AspS9I	GGNCC	4 cut(s)	272, 415, 1297, 1922
AsuC2I	CCSGG	1 cut(s)	972
AsuHPI	GGTGA	2 cut(s)	1448, 1589
AvaII	GGWCC	3 cut(s)	415, 1297, 1922
BauI	CACGAG	2 cut(s)	777, 835
BbrPI	CACGTG	2 cut(s)	1526, 1555
Bbv12I	GWGCWC	2 cut(s)	697, 787
BbvI	GCAGC	4 cut(s)	162, 290, 706, 1507
BccI	CCATC	6 cut(s)	26, 91, 118, 679, 1096, 1666
BceAI	ACGGC	2 cut(s)	1776, 1788
BciT130I	CCWGG	2 cut(s)	292, 1119
BciVI	GTATCC	1 cut(s)	807
BcnI	CCSGG	1 cut(s)	972
BcoDI	GTCTC	5 cut(s)	30, 766, 1120, 1165, 1358
BcuI	ACTAGT	1 cut(s)	533
BfaI	CTAG	8 cut(s)	534, 584, 825, 858, 1002, 1685, 1926, 1939
BfmI	CTRYAG	2 cut(s)	21, 276
BfoI	RGCGCY	1 cut(s)	914
BfuI	GTATCC	1 cut(s)	807
BglII	AGATCT	2 cut(s)	580, 985
BisI	GCNGC	6 cut(s)	151, 279, 720, 1521, 1885, 1888
BlsI	GCNGC	6 cut(s)	152, 280, 721, 1522, 1886, 1889
BmcAI	AGTACT	1 cut(s)	1234
Bme1390I	CCNGG	3 cut(s)	292, 972, 1119
Bme18I	GGWCC	3 cut(s)	415, 1297, 1922
BmgT120I	GGNCC	4 cut(s)	272, 415, 1297, 1922
BmiI	GGNNCC	2 cut(s)	228, 416
BmrFI	CCNGG	3 cut(s)	292, 972, 1119
BmrI	ACTGGG	1 cut(s)	518
BmsI	GCATC	6 cut(s)	496, 504, 605, 1044, 1372, 1751
BmuI	ACTGGG	1 cut(s)	518
BoxI	GACNNNNGTC	1 cut(s)	1177
BplI	GAGNNNNNCTC	2 cut(s)	619, 651
BpuEI	CTTGAG	2 cut(s)	1013, 1213
BpuMI	CCSGG	1 cut(s)	972
BsaAI	YACGTR	3 cut(s)	788, 1526, 1555
BsaBI	GATNNNNATC	1 cut(s)	1741
BsaHI	GRCGYC	1 cut(s)	1178
BsaI	GGTCTC	1 cut(s)	766
BsaJI	CCNNGG	2 cut(s)	291, 418
BsaWI	WCCGGW	1 cut(s)	1599
Bsc4I	CCNNNNNNNGG	4 cut(s)	281, 424, 1118, 1672
Bse118I	RCCGGY	1 cut(s)	1773
Bse1I	ACTGG	6 cut(s)	524, 883, 1179, 1392, 1400, 1924
Bse3DI	GCAATG	1 cut(s)	1010
Bse8I	GATNNNNATC	1 cut(s)	1741
BseBI	CCWGG	2 cut(s)	292, 1119
BseDI	CCNNGG	2 cut(s)	291, 418
BseGI	GGATG	1 cut(s)	1059
BseJI	GATNNNNATC	1 cut(s)	1741
BseLI	CCNNNNNNNGG	4 cut(s)	281, 424, 1118, 1672
BseMI	GCAATG	1 cut(s)	1010
BseMII	CTCAG	3 cut(s)	710, 782, 1460
BseNI	ACTGG	6 cut(s)	524, 883, 1179, 1392, 1400, 1924
BseRI	GAGGAG	2 cut(s)	921, 960
BseXI	GCAGC	4 cut(s)	162, 290, 706, 1507
BseYI	CCCAGC	1 cut(s)	281
BsgI	GTGCAG	2 cut(s)	150, 1506
Bsh1236I	CGCG	1 cut(s)	133
BshFI	GGCC	6 cut(s)	205, 274, 631, 689, 1791, 1803
BsiHKAI	GWGCWC	2 cut(s)	697, 787
BsiSI	CCGG	5 cut(s)	224, 971, 1418, 1600, 1774
BslFI	GGGAC	3 cut(s)	428, 533, 602
BslI	CCNNNNNNNGG	4 cut(s)	281, 424, 1118, 1672
BsmAI	GTCTC	5 cut(s)	30, 766, 1120, 1165, 1358
BsmFI	GGGAC	3 cut(s)	428, 533, 602
BsmI	GAATGC	1 cut(s)	1646
BsnI	GGCC	6 cut(s)	205, 274, 631, 689, 1791, 1803
Bso31I	GGTCTC	1 cut(s)	766
Bsp1286I	GDGCHC	2 cut(s)	697, 787
BspACI	CCGC	8 cut(s)	185, 363, 369, 551, 1869, 1884, 1887, 1911
BspANI	GGCC	6 cut(s)	205, 274, 631, 689, 1791, 1803
BspCNI	CTCAG	3 cut(s)	709, 781, 1461
BspFNI	CGCG	1 cut(s)	133
BspHI	TCATGA	1 cut(s)	1267
BspLI	GGNNCC	2 cut(s)	228, 416
BspMAI	CTGCAG	1 cut(s)	280
BspPI	GGATC	3 cut(s)	212, 547, 755
BspTNI	GGTCTC	1 cut(s)	766
BsrDI	GCAATG	1 cut(s)	1010
BsrFI	RCCGGY	1 cut(s)	1773
BsrI	ACTGG	6 cut(s)	524, 883, 1179, 1392, 1400, 1924
BssAI	RCCGGY	1 cut(s)	1773
BssECI	CCNNGG	2 cut(s)	291, 418
BssNI	GRCGYC	1 cut(s)	1178
BssSI	CACGAG	2 cut(s)	777, 835
Bst2BI	CACGAG	2 cut(s)	777, 835
Bst2UI	CCWGG	2 cut(s)	292, 1119
Bst4CI	ACNGT	3 cut(s)	419, 793, 927
BstACI	GRCGYC	1 cut(s)	1178
BstBAI	YACGTR	3 cut(s)	788, 1526, 1555
BstC8I	GCNNGC	5 cut(s)	276, 1337, 1341, 1620, 1722
BstDEI	CTNAG	3 cut(s)	696, 768, 1469
BstDSI	CCRYGG	1 cut(s)	418
BstENI	CCTNNNNNAGG	1 cut(s)	1116
BstF5I	GGATG	1 cut(s)	1059
BstFNI	CGCG	1 cut(s)	133
BstH2I	RGCGCY	1 cut(s)	914
BstHHI	GCGC	2 cut(s)	135, 913
BstMAI	GTCTC	5 cut(s)	30, 766, 1120, 1165, 1358
BstMWI	GCNNNNNNNGC	4 cut(s)	132, 287, 478, 1748
BstNI	CCWGG	2 cut(s)	292, 1119
BstNSI	RCATGY	1 cut(s)	1111
BstPAI	GACNNNNGTC	1 cut(s)	1177
BstSCI	CCNGG	3 cut(s)	290, 970, 1117
BstSFI	CTRYAG	2 cut(s)	21, 276
BstUI	CGCG	1 cut(s)	133
BstV1I	GCAGC	4 cut(s)	162, 290, 706, 1507
BstX2I	RGATCY	3 cut(s)	539, 580, 985
BstYI	RGATCY	3 cut(s)	539, 580, 985
BsuI	GTATCC	1 cut(s)	807
BsuRI	GGCC	6 cut(s)	205, 274, 631, 689, 1791, 1803
BtgI	CCRYGG	1 cut(s)	418
BtgZI	GCGATG	1 cut(s)	114
BtsCI	GGATG	1 cut(s)	1059
BtsIMutI	CAGTG	4 cut(s)	1150, 1385, 1393, 1466
Cac8I	GCNNGC	5 cut(s)	276, 1337, 1341, 1620, 1722
CaiI	CAGNNNCTG	5 cut(s)	20, 50, 707, 1174, 1468
CciI	TCATGA	1 cut(s)	1267
CfoI	GCGC	2 cut(s)	135, 913
Cfr10I	RCCGGY	1 cut(s)	1773
Cfr13I	GGNCC	4 cut(s)	272, 415, 1297, 1922
CseI	GACGC	4 cut(s)	56, 599, 635, 1167
CsiI	ACCWGGT	1 cut(s)	1117
Csp6I	GTAC	3 cut(s)	789, 1233, 1917
CspCI	CAANNNNNGTGG	8 cut(s)	385, 420, 1104, 1139, 1485, 1497, 1520, 1532
CviQI	GTAC	3 cut(s)	789, 1233, 1917
DdeI	CTNAG	3 cut(s)	696, 768, 1469
DraI	TTTAAA	1 cut(s)	603
EaeI	YGGCCR	1 cut(s)	1801
EciI	GGCGGA	1 cut(s)	174
Eco147I	AGGCCT	1 cut(s)	205
Eco31I	GGTCTC	1 cut(s)	766
Eco32I	GATATC	1 cut(s)	520
Eco47I	GGWCC	3 cut(s)	415, 1297, 1922
Eco57I	CTGAAG	1 cut(s)	1795
Eco72I	CACGTG	2 cut(s)	1526, 1555
EcoNI	CCTNNNNNAGG	1 cut(s)	1116
EcoRI	GAATTC	1 cut(s)	1822
EcoRII	CCWGG	2 cut(s)	290, 1117
EcoRV	GATATC	1 cut(s)	520
FaqI	GGGAC	3 cut(s)	428, 533, 602
FauI	CCCGC	1 cut(s)	558
Fnu4HI	GCNGC	6 cut(s)	151, 279, 720, 1521, 1885, 1888
FokI	GGATG	1 cut(s)	1066
Fsp4HI	GCNGC	6 cut(s)	151, 279, 720, 1521, 1885, 1888
FspBI	CTAG	8 cut(s)	534, 584, 825, 858, 1002, 1685, 1926, 1939
GlaI	GCGC	2 cut(s)	134, 912
GluI	GCNGC	6 cut(s)	151, 279, 720, 1521, 1885, 1888
GsaI	CCCAGC	1 cut(s)	285
HaeII	RGCGCY	1 cut(s)	914
HaeIII	GGCC	6 cut(s)	205, 274, 631, 689, 1791, 1803
HapII	CCGG	5 cut(s)	224, 971, 1418, 1600, 1774
HgaI	GACGC	4 cut(s)	56, 599, 635, 1167
HhaI	GCGC	2 cut(s)	135, 913
Hin1I	GRCGYC	1 cut(s)	1178
Hin6I	GCGC	2 cut(s)	133, 911
HinP1I	GCGC	2 cut(s)	133, 911
HindIII	AAGCTT	1 cut(s)	1341
HinfI	GANTC	2 cut(s)	17, 1271
HpaII	CCGG	5 cut(s)	224, 971, 1418, 1600, 1774
HphI	GGTGA	2 cut(s)	1448, 1589
Hpy166II	GTNNAC	2 cut(s)	1487, 1597
Hpy188III	TCNNGA	6 cut(s)	1037, 1268, 1480, 1532, 1632, 1712
Hpy8I	GTNNAC	2 cut(s)	1487, 1597
Hpy99I	CGWCG	1 cut(s)	1183
HpyAV	CCTTC	5 cut(s)	240, 1212, 1313, 1366, 1809
HpyCH4III	ACNGT	3 cut(s)	419, 793, 927
HpyCH4IV	ACGT	3 cut(s)	787, 1525, 1554
HpyF10VI	GCNNNNNNNGC	4 cut(s)	132, 287, 478, 1748
HpyF3I	CTNAG	3 cut(s)	696, 768, 1469
HpySE526I	ACGT	3 cut(s)	787, 1525, 1554
Hsp92I	GRCGYC	1 cut(s)	1178
HspAI	GCGC	2 cut(s)	133, 911
LmnI	GCTCC	5 cut(s)	232, 757, 782, 908, 1376
Lsp1109I	GCAGC	4 cut(s)	162, 290, 706, 1507
LweI	GCATC	6 cut(s)	496, 504, 605, 1044, 1372, 1751
MabI	ACCWGGT	1 cut(s)	1117
MaeI	CTAG	8 cut(s)	534, 584, 825, 858, 1002, 1685, 1926, 1939
MaeII	ACGT	3 cut(s)	787, 1525, 1554
MaeIII	GTNAC	2 cut(s)	1436, 1805
MboII	GAAGA	4 cut(s)	185, 863, 1099, 1562
MflI	RGATCY	3 cut(s)	539, 580, 985
MhlI	GDGCHC	2 cut(s)	697, 787
MluCI	AATT	8 cut(s)	598, 735, 1080, 1242, 1259, 1497, 1561, 1822
MmeI	TCCRAC	4 cut(s)	371, 1161, 1195, 1589
MroXI	GAANNNNTTC	2 cut(s)	865, 1263
MseI	TTAA	5 cut(s)	602, 1241, 1407, 1653, 1830
MspA1I	CMGCKG	2 cut(s)	281, 719
MspI	CCGG	5 cut(s)	224, 971, 1418, 1600, 1774
MspR9I	CCNGG	3 cut(s)	292, 972, 1119
Mva1269I	GAATGC	1 cut(s)	1646
MvaI	CCWGG	2 cut(s)	292, 1119
MvnI	CGCG	1 cut(s)	133
MwoI	GCNNNNNNNGC	4 cut(s)	132, 287, 478, 1748
NciI	CCSGG	1 cut(s)	972
NlaIV	GGNNCC	2 cut(s)	228, 416
NmuCI	GTSAC	2 cut(s)	1436, 1805
NspI	RCATGY	1 cut(s)	1111
PagI	TCATGA	1 cut(s)	1267
PceI	AGGCCT	1 cut(s)	205
PcsI	WCGNNNNNNNCGW	3 cut(s)	166, 784, 1615
PctI	GAATGC	1 cut(s)	1646
PdmI	GAANNNNTTC	2 cut(s)	865, 1263
PfeI	GAWTC	2 cut(s)	17, 1271
PkrI	GCNGC	6 cut(s)	152, 280, 721, 1522, 1886, 1889
PmaCI	CACGTG	2 cut(s)	1526, 1555
PmlI	CACGTG	2 cut(s)	1526, 1555
Ppu21I	YACGTR	3 cut(s)	788, 1526, 1555
PshAI	GACNNNNGTC	1 cut(s)	1177
PshBI	ATTAAT	1 cut(s)	1407
PsiI	TTATAA	1 cut(s)	267
Psp6I	CCWGG	2 cut(s)	290, 1117
PspCI	CACGTG	2 cut(s)	1526, 1555
PspFI	CCCAGC	1 cut(s)	281
PspGI	CCWGG	2 cut(s)	290, 1117
PspN4I	GGNNCC	2 cut(s)	228, 416
PspPI	GGNCC	4 cut(s)	272, 415, 1297, 1922
PstI	CTGCAG	1 cut(s)	280
PstNI	CAGNNNCTG	5 cut(s)	20, 50, 707, 1174, 1468
PsuI	RGATCY	3 cut(s)	539, 580, 985
PvuII	CAGCTG	2 cut(s)	281, 719
RsaI	GTAC	3 cut(s)	790, 1234, 1918
RsaNI	GTAC	3 cut(s)	789, 1233, 1917
SaqAI	TTAA	5 cut(s)	602, 1241, 1407, 1653, 1830
SatI	GCNGC	6 cut(s)	151, 279, 720, 1521, 1885, 1888
Sau96I	GGNCC	4 cut(s)	272, 415, 1297, 1922
ScaI	AGTACT	1 cut(s)	1234
ScrFI	CCNGG	3 cut(s)	292, 972, 1119
SduI	GDGCHC	2 cut(s)	697, 787
SexAI	ACCWGGT	1 cut(s)	1117
SfaNI	GCATC	6 cut(s)	496, 504, 605, 1044, 1372, 1751
SfcI	CTRYAG	2 cut(s)	21, 276
SinI	GGWCC	3 cut(s)	415, 1297, 1922
SmiI	ATTTAAAT	1 cut(s)	603
SmlI	CTYRAG	2 cut(s)	992, 1228
SmoI	CTYRAG	2 cut(s)	992, 1228
SpeI	ACTAGT	1 cut(s)	533
Sse9I	AATT	8 cut(s)	598, 735, 1080, 1242, 1259, 1497, 1561, 1822
SseBI	AGGCCT	1 cut(s)	205
SsiI	CCGC	8 cut(s)	185, 363, 369, 551, 1869, 1884, 1887, 1911
SspI	AATATT	1 cut(s)	607
SspMI	CTAG	8 cut(s)	534, 584, 825, 858, 1002, 1685, 1926, 1939
StuI	AGGCCT	1 cut(s)	205
StyD4I	CCNGG	3 cut(s)	290, 970, 1117
SwaI	ATTTAAAT	1 cut(s)	603
TaaI	ACNGT	3 cut(s)	419, 793, 927
TaiI	ACGT	3 cut(s)	790, 1528, 1557
TaqI	TCGA	4 cut(s)	376, 1670, 1735, 1745
TasI	AATT	8 cut(s)	598, 735, 1080, 1242, 1259, 1497, 1561, 1822
TatI	WGTACW	1 cut(s)	1232
TauI	GCSGC	2 cut(s)	1887, 1890
TfiI	GAWTC	2 cut(s)	17, 1271
Tru1I	TTAA	5 cut(s)	602, 1241, 1407, 1653, 1830
Tru9I	TTAA	5 cut(s)	602, 1241, 1407, 1653, 1830
TscAI	CASTG	4 cut(s)	1150, 1392, 1400, 1473
TseFI	GTSAC	2 cut(s)	1436, 1805
TseI	GCWGC	4 cut(s)	150, 278, 719, 1520
Tsp45I	GTSAC	2 cut(s)	1436, 1805
TspDTI	ATGAA	5 cut(s)	45, 864, 1256, 1284, 1421
TspGWI	ACGGA	2 cut(s)	198, 918
TspRI	CASTG	4 cut(s)	1150, 1392, 1400, 1473
VpaK11BI	GGWCC	3 cut(s)	415, 1297, 1922
VspI	ATTAAT	1 cut(s)	1407
XagI	CCTNNNNNAGG	1 cut(s)	1116
XapI	RAATTY	4 cut(s)	598, 1259, 1561, 1822
XceI	RCATGY	1 cut(s)	1111
XmnI	GAANNNNTTC	2 cut(s)	865, 1263
XspI	CTAG	8 cut(s)	534, 584, 825, 858, 1002, 1685, 1926, 1939
ZrmI	AGTACT	1 cut(s)	1234

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.