Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Forward (+)

607362 .. 611743

Gene Structure 4382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g00760.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGCGGACTTCATGGGCAGATTTGGCTGCAAATTCTGCAGCTGAGAATGTAGGTTCTGGCTCTTCTGGCAATGCTGGTTCAGGGCATGCTGCTGCTCCTGCTCCTAATCGATCCACCTATGTCCCCCCACATCTCCGTAACCGTCCACCTTCCTCGGACCCACCTGCTCCAGCATATACTGCGCCGGTTACCAATGATAAAGGTGGCCCAGGTGGGTTCAGTGCACCTCGTTGGGGTGGTCCCAGAAATGACAACAGTCGAACTGGCCATGGTGGCAATGCTGGTCGCGGTGGAGGATGGGGAAGCAGAAGTGGTGGTTGGGATGGGAGAACACGAGAAGTGAACCCCTTTAGAGATGATGATGAAACAGAGCAGCCGTTTAGTGAGCAAGAGAACAGTGGTATTAACTTTGATGCATATGAAGATATTCCGGTTGAGACAAGTGGCGACAATGTTCCCACTCCTGTGAATACCTTTGCAGATATTGACTTGGGGGACGCACTTAATAAAAATATTCAGAGGTGCAAATATGTGAAACCCACACCTGTGCAGCGTCATGCCATTCCTATCTCCCTTGCAGGCCGAGACTTGATGGCATGTGCCCAAACTGGTTCTGGAAAGACTGCTGCTTTCTGTTTCCCAATCATCAGTGGAATTATGAAGGGACAACCTGCACAGAGGCCACCCCGTGGTGCACATACAGTTTATCCGCTTGCTCTCATTCTTTCTCCTACTAGGGAGCTTTCAATTCAAATTCATGAGGAAGCCCGGAAATTTTCATATCAAACAGGTGTTAGGGTGGTTGTTGCGTATGGAGGAGCACCAATTAACCAACAGCTGCGGGAACTTGAAAGAGGTGTTGATATTCTTGTGGCAACTCCTGGAAGATTGGTGGATTTGCTGGAGAGAGCCAGGGTTTCGTTGCAGATGATTAGATATTTAGCCCTAGATGAGGCTGATCGAATGCTGGATATGGGTTTTGAACCACAAATAAGGAAAATTGTGGAGCAAATGGACATGCCTCCTCCAGGTATGCGACAGACTATGCTGTTCAGTGCCACTTTTCCGAAGGAAATACAGAGACTGGCCTCTGATTTTCTTGCAAAGTACATCTTTCTGGCAGTTGGAAGGGTGGGTTCTAGTACTGATTTGATTGTCCAAAGAGTGGAATTTGTGCATGAATCTGATAAAAGAAGTCACCTCATGGACCTTATTCATGCACAGAGGGCCAATGGCGCACAGGGCAAGCAAGCTCTGACATTAGTTTTTGTTGAGACAAAGAAGGGAGCTGATTCGCTGGAACATTGGCTGTGTATGAATGGTTTTCCTGCAACTACTATTCATGGTGACAGATCACAGCAGGAAAGAGAACAAGCATTGAGGTCATTTAAGAGTGGGAACACTCCAATCTTGGTGGCTACTGATGTGGCTGCACGTGGGCTAGACATTCCTCATGTTGCACATGTTGTCAACTTTGATCTTCCAAATGACATTGATGATTATGTTCACCGCATTGGTCGTACTGGACGAGCTGGGAAGTCTGGCTTGGCTACTGCCTTCTTTAATGAGAACAATTCATCACTTGCCAGGTCTTTGGCAGAATTGATGCAAGAATCAAATCAAGAAGTACCTGCTTGGCTGTCTCGGTACGCAGCTCGAGCTTCTTTTGGTGGTGGGAGGAACCGTCGTTCTGGGGGAGGCCGGTTTGGTGGCCGTGACTTCCGAAGGGATTCATCTTTCAGCAGGGGTGGCAATGATTACTATGGTGGAGGCGGTGGGGGTAGCAGCGGTGGATATGGGGGTGCTTCTGGTGGATATGGGGGTGCCTCTGGAGGATATGGTGCTGGGGTGGCCAGTGCGTGGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

623

Amino Acids

66.66

Weight (kDa)

8.53

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	172
Acc36I	ACCTGC	3 cut(s)	172, 679, 1639
AccB1I	GGYRCC	1 cut(s)	1823
AccB7I	CCANNNNNTGG	3 cut(s)	689, 1165, 1860
AccII	CGCG	1 cut(s)	288
AciI	CCGC	7 cut(s)	4, 288, 710, 841, 1510, 1773, 1788
AclWI	GGATC	1 cut(s)	105
AcoI	YGGCCR	3 cut(s)	265, 1711, 1851
AcsI	RAATTY	4 cut(s)	31, 753, 773, 1169
AcvI	CACGTG	1 cut(s)	1436
AdeI	CACNNNGTG	1 cut(s)	689
AfaI	GTAC	5 cut(s)	1109, 1144, 1522, 1629, 1649
AfiI	CCNNNNNNNGG	6 cut(s)	233, 689, 952, 1028, 1165, 1860
AflIII	ACRYGT	1 cut(s)	1462
AgsI	TTSAA	4 cut(s)	747, 752, 851, 983
AjnI	CCWGG	5 cut(s)	208, 880, 911, 1027, 1586
AjuI	GAANNNNNNNTTGG	4 cut(s)	301, 333, 1529, 1561
AleI	CACNNNNGTG	2 cut(s)	464, 545
AloI	GAACNNNNNNTCC	2 cut(s)	1672, 1704
AluBI	AGCT	8 cut(s)	41, 742, 838, 1253, 1289, 1532, 1655, 1661
AluI	AGCT	8 cut(s)	41, 742, 838, 1253, 1289, 1532, 1655, 1661
Alw21I	GWGCWC	3 cut(s)	226, 697, 823
Alw26I	GTCTC	5 cut(s)	431, 579, 1075, 1268, 1647
Alw44I	GTGCAC	2 cut(s)	222, 693
AlwI	GGATC	1 cut(s)	105
AlwNI	CAGNNNCTG	1 cut(s)	1084
Ama87I	CYCGRG	1 cut(s)	1656
AoxI	GGCC	9 cut(s)	205, 265, 580, 680, 1086, 1227, 1699, 1711, 1851
ApaLI	GTGCAC	2 cut(s)	222, 693
ApoI	RAATTY	4 cut(s)	31, 753, 773, 1169
Asp700I	GAANNNNTTC	2 cut(s)	426, 1729
AspLEI	GCGC	2 cut(s)	184, 1238
AspS9I	GGNCC	5 cut(s)	157, 206, 239, 1207, 1227
AsuC2I	CCSGG	1 cut(s)	769
AsuHPI	GGTGA	3 cut(s)	1190, 1358, 1499
AvaI	CYCGRG	1 cut(s)	1656
AvaII	GGWCC	3 cut(s)	157, 239, 1207
BaeGI	GKGCMC	3 cut(s)	226, 604, 697
BalI	TGGCCA	2 cut(s)	267, 1853
BanI	GGYRCC	1 cut(s)	1823
BauI	CACGAG	1 cut(s)	333
BbrPI	CACGTG	1 cut(s)	1436
Bbv12I	GWGCWC	3 cut(s)	226, 697, 823
BccI	CCATC	3 cut(s)	291, 317, 586
BceAI	ACGGC	2 cut(s)	361, 1698
BciT130I	CCWGG	5 cut(s)	210, 882, 913, 1029, 1588
BcnI	CCSGG	1 cut(s)	769
BcoDI	GTCTC	5 cut(s)	431, 579, 1075, 1268, 1647
BfaI	CTAG	4 cut(s)	735, 947, 1140, 1442
BfmI	CTRYAG	1 cut(s)	36
BfuAI	ACCTGC	3 cut(s)	172, 679, 1639
BglI	GCCNNNNNGGC	1 cut(s)	273
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	6 cut(s)	210, 769, 882, 913, 1029, 1588
Bme18I	GGWCC	3 cut(s)	157, 239, 1207
BmeT110I	CYCGRG	1 cut(s)	1656
BmgT120I	GGNCC	5 cut(s)	157, 206, 239, 1207, 1227
BmiI	GGNNCC	4 cut(s)	159, 241, 1682, 1825
BmrFI	CCNGG	6 cut(s)	210, 769, 882, 913, 1029, 1588
BmsI	GCATC	2 cut(s)	403, 1596
BoxI	GACNNNNGTC	1 cut(s)	255
BpmI	CTGGAG	4 cut(s)	153, 923, 1011, 1851
BpuMI	CCSGG	1 cut(s)	769
Bsa29I	ATCGAT	1 cut(s)	109
BsaAI	YACGTR	1 cut(s)	1436
BsaJI	CCNNGG	5 cut(s)	153, 208, 268, 688, 912
BsaWI	WCCGGW	1 cut(s)	430
BsaXI	ACNNNNNCTCC	2 cut(s)	1669, 1699
Bsc4I	CCNNNNNNNGG	6 cut(s)	233, 689, 952, 1028, 1165, 1860
Bse118I	RCCGGY	2 cut(s)	184, 1701
Bse1I	ACTGG	5 cut(s)	268, 613, 1089, 1528, 1854
Bse3DI	GCAATG	3 cut(s)	76, 283, 1759
BseBI	CCWGG	5 cut(s)	210, 882, 913, 1029, 1588
BseCI	ATCGAT	1 cut(s)	109
BseDI	CCNNGG	5 cut(s)	153, 208, 268, 688, 912
BseGI	GGATG	2 cut(s)	302, 328
BseLI	CCNNNNNNNGG	6 cut(s)	233, 689, 952, 1028, 1165, 1860
BseMI	GCAATG	3 cut(s)	76, 283, 1759
BseMII	CTCAG	1 cut(s)	33
BseNI	ACTGG	5 cut(s)	268, 613, 1089, 1528, 1854
BseRI	GAGGAG	2 cut(s)	831, 1014
BseSI	GKGCMC	3 cut(s)	226, 604, 697
BseYI	CCCAGC	2 cut(s)	1532, 1844
BsgI	GTGCAG	3 cut(s)	569, 657, 1416
Bsh1236I	CGCG	1 cut(s)	288
BshFI	GGCC	9 cut(s)	207, 267, 582, 682, 1088, 1229, 1701, 1713, 1853
BshNI	GGYRCC	1 cut(s)	1823
BshVI	ATCGAT	1 cut(s)	109
BsiHKAI	GWGCWC	3 cut(s)	226, 697, 823
BsiHKCI	CYCGRG	1 cut(s)	1656
BsiSI	CCGG	4 cut(s)	185, 431, 769, 1702
BslFI	GGGAC	4 cut(s)	107, 225, 509, 678
BslI	CCNNNNNNNGG	6 cut(s)	233, 689, 952, 1028, 1165, 1860
BsmAI	GTCTC	5 cut(s)	431, 579, 1075, 1268, 1647
BsmFI	GGGAC	4 cut(s)	107, 225, 509, 678
BsmI	GAATGC	1 cut(s)	969
BsnI	GGCC	9 cut(s)	207, 267, 582, 682, 1088, 1229, 1701, 1713, 1853
BsoBI	CYCGRG	1 cut(s)	1656
Bsp1286I	GDGCHC	4 cut(s)	226, 604, 697, 823
Bsp143I	GATC	4 cut(s)	110, 958, 1352, 1477
Bsp19I	CCATGG	1 cut(s)	268
BspACI	CCGC	7 cut(s)	4, 288, 710, 841, 1510, 1773, 1788
BspANI	GGCC	9 cut(s)	207, 267, 582, 682, 1088, 1229, 1701, 1713, 1853
BspCNI	CTCAG	1 cut(s)	34
BspDI	ATCGAT	1 cut(s)	109
BspFNI	CGCG	1 cut(s)	288
BspHI	TCATGA	1 cut(s)	757
BspLI	GGNNCC	4 cut(s)	159, 241, 1682, 1825
BspMAI	CTGCAG	1 cut(s)	40
BspMI	ACCTGC	3 cut(s)	172, 679, 1639
BspPI	GGATC	1 cut(s)	105
BspQI	GCTCTTC	1 cut(s)	67
BspT107I	GGYRCC	1 cut(s)	1823
BsrDI	GCAATG	3 cut(s)	76, 283, 1759
BsrFI	RCCGGY	2 cut(s)	184, 1701
BsrI	ACTGG	5 cut(s)	268, 613, 1089, 1528, 1854
BssAI	RCCGGY	2 cut(s)	184, 1701
BssECI	CCNNGG	5 cut(s)	153, 208, 268, 688, 912
BssMI	GATC	4 cut(s)	110, 958, 1352, 1477
BssSI	CACGAG	1 cut(s)	333
BssT1I	CCWWGG	1 cut(s)	268
Bst2BI	CACGAG	1 cut(s)	333
Bst2UI	CCWGG	5 cut(s)	210, 882, 913, 1029, 1588
Bst4CI	ACNGT	5 cut(s)	143, 257, 398, 703, 1685
Bst6I	CTCTTC	1 cut(s)	67
BstAPI	GCANNNNNTGC	2 cut(s)	35, 179
BstBAI	YACGTR	1 cut(s)	1436
BstC8I	GCNNGC	5 cut(s)	87, 580, 714, 1247, 1251
BstDEI	CTNAG	1 cut(s)	42
BstDSI	CCRYGG	2 cut(s)	268, 688
BstEII	GGTNACC	1 cut(s)	187
BstENI	CCTNNNNNAGG	2 cut(s)	950, 1026
BstF5I	GGATG	2 cut(s)	302, 328
BstFNI	CGCG	1 cut(s)	288
BstHHI	GCGC	2 cut(s)	184, 1238
BstKTI	GATC	4 cut(s)	113, 961, 1355, 1480
BstMAI	GTCTC	5 cut(s)	431, 579, 1075, 1268, 1647
BstMBI	GATC	4 cut(s)	110, 958, 1352, 1477
BstNI	CCWGG	5 cut(s)	210, 882, 913, 1029, 1588
BstNSI	RCATGY	4 cut(s)	89, 600, 1021, 1466
BstPAI	GACNNNNGTC	1 cut(s)	255
BstPI	GGTNACC	1 cut(s)	187
BstSCI	CCNGG	6 cut(s)	208, 767, 880, 911, 1027, 1586
BstSFI	CTRYAG	1 cut(s)	36
BstSLI	GKGCMC	3 cut(s)	226, 604, 697
BstUI	CGCG	1 cut(s)	288
BstXI	CCANNNNNNTGG	1 cut(s)	1594
Bsu15I	ATCGAT	1 cut(s)	109
BsuRI	GGCC	9 cut(s)	207, 267, 582, 682, 1088, 1229, 1701, 1713, 1853
BsuTUI	ATCGAT	1 cut(s)	109
BtgI	CCRYGG	2 cut(s)	268, 688
BtsCI	GGATG	2 cut(s)	302, 328
BtsIMutI	CAGTG	5 cut(s)	226, 403, 655, 1060, 1861
BveI	ACCTGC	3 cut(s)	172, 679, 1639
Cac8I	GCNNGC	5 cut(s)	87, 580, 714, 1247, 1251
CaiI	CAGNNNCTG	1 cut(s)	1084
CciI	TCATGA	1 cut(s)	757
CfoI	GCGC	2 cut(s)	184, 1238
Cfr10I	RCCGGY	2 cut(s)	184, 1701
Cfr13I	GGNCC	5 cut(s)	157, 206, 239, 1207, 1227
ClaI	ATCGAT	1 cut(s)	109
CseI	GACGC	2 cut(s)	506, 542
Csp6I	GTAC	5 cut(s)	1108, 1143, 1521, 1628, 1648
CspCI	CAANNNNNGTGG	2 cut(s)	1395, 1430
CviQI	GTAC	5 cut(s)	1108, 1143, 1521, 1628, 1648
DdeI	CTNAG	1 cut(s)	42
DpnI	GATC	4 cut(s)	112, 960, 1354, 1479
DpnII	GATC	4 cut(s)	110, 958, 1352, 1477
DraIII	CACNNNGTG	1 cut(s)	689
EaeI	YGGCCR	3 cut(s)	265, 1711, 1851
Eam1104I	CTCTTC	1 cut(s)	67
EarI	CTCTTC	1 cut(s)	67
Eco130I	CCWWGG	1 cut(s)	268
Eco47I	GGWCC	3 cut(s)	157, 239, 1207
Eco72I	CACGTG	1 cut(s)	1436
Eco88I	CYCGRG	1 cut(s)	1656
Eco91I	GGTNACC	1 cut(s)	187
EcoNI	CCTNNNNNAGG	2 cut(s)	950, 1026
EcoO65I	GGTNACC	1 cut(s)	187
EcoRII	CCWGG	5 cut(s)	208, 880, 911, 1027, 1586
EcoT14I	CCWWGG	1 cut(s)	268
EcoT22I	ATGCAT	1 cut(s)	418
ErhI	CCWWGG	1 cut(s)	268
FalI	AAGNNNNNCTT	4 cut(s)	1097, 1129, 1529, 1561
FaqI	GGGAC	4 cut(s)	107, 225, 509, 678
FauI	CCCGC	1 cut(s)	834
FauNDI	CATATG	1 cut(s)	418
FokI	GGATG	2 cut(s)	309, 335
FspBI	CTAG	4 cut(s)	735, 947, 1140, 1442
GlaI	GCGC	2 cut(s)	183, 1237
GsaI	CCCAGC	2 cut(s)	1536, 1848
GsuI	CTGGAG	4 cut(s)	153, 923, 1011, 1851
HaeIII	GGCC	9 cut(s)	207, 267, 582, 682, 1088, 1229, 1701, 1713, 1853
HapII	CCGG	4 cut(s)	185, 431, 769, 1702
HgaI	GACGC	2 cut(s)	506, 542
HhaI	GCGC	2 cut(s)	184, 1238
Hin6I	GCGC	2 cut(s)	182, 1236
HinP1I	GCGC	2 cut(s)	182, 1236
HincII	GTYRAC	1 cut(s)	1471
HindII	GTYRAC	1 cut(s)	1471
HinfI	GANTC	4 cut(s)	1181, 1292, 1613, 1730
HpaII	CCGG	4 cut(s)	185, 431, 769, 1702
HphI	GGTGA	3 cut(s)	1190, 1358, 1499
Hpy166II	GTNNAC	6 cut(s)	146, 224, 343, 695, 1471, 1507
Hpy188I	TCNGA	7 cut(s)	157, 519, 1068, 1093, 1186, 1257, 1724
Hpy188III	TCNNGA	4 cut(s)	615, 758, 1622, 1830
Hpy8I	GTNNAC	6 cut(s)	146, 224, 343, 695, 1471, 1507
Hpy99I	CGWCG	1 cut(s)	1689
HpyAV	CCTTC	7 cut(s)	159, 655, 1063, 1122, 1276, 1567, 1719
HpyCH4III	ACNGT	5 cut(s)	143, 257, 398, 703, 1685
HpyCH4IV	ACGT	1 cut(s)	1435
HpyF3I	CTNAG	1 cut(s)	42
HpySE526I	ACGT	1 cut(s)	1435
HspAI	GCGC	2 cut(s)	182, 1236
Kzo9I	GATC	4 cut(s)	110, 958, 1352, 1477
LguI	GCTCTTC	1 cut(s)	67
LmnI	GCTCC	7 cut(s)	100, 106, 172, 739, 818, 1006, 1286
LweI	GCATC	2 cut(s)	403, 1596
MaeI	CTAG	4 cut(s)	735, 947, 1140, 1442
MaeII	ACGT	1 cut(s)	1435
MaeIII	GTNAC	5 cut(s)	137, 187, 1196, 1346, 1715
MalI	GATC	4 cut(s)	112, 960, 1354, 1479
MboI	GATC	4 cut(s)	110, 958, 1352, 1477
MboII	GAAGA	4 cut(s)	54, 434, 897, 1472
MhlI	GDGCHC	4 cut(s)	226, 604, 697, 823
MlsI	TGGCCA	2 cut(s)	267, 1853
MluNI	TGGCCA	2 cut(s)	267, 1853
MmeI	TCCRAC	1 cut(s)	1105
Mox20I	TGGCCA	2 cut(s)	267, 1853
Mph1103I	ATGCAT	1 cut(s)	418
MroXI	GAANNNNTTC	2 cut(s)	426, 1729
MscI	TGGCCA	2 cut(s)	267, 1853
MseI	TTAA	5 cut(s)	405, 504, 828, 1389, 1563
MslI	CAYNNNNRTG	2 cut(s)	464, 545
Msp20I	TGGCCA	2 cut(s)	267, 1853
MspA1I	CMGCKG	3 cut(s)	41, 838, 1788
MspI	CCGG	4 cut(s)	185, 431, 769, 1702
MspR9I	CCNGG	6 cut(s)	210, 769, 882, 913, 1029, 1588
Mva1269I	GAATGC	1 cut(s)	969
MvaI	CCWGG	5 cut(s)	210, 882, 913, 1029, 1588
MvnI	CGCG	1 cut(s)	288
NciI	CCSGG	1 cut(s)	769
NcoI	CCATGG	1 cut(s)	268
NdeI	CATATG	1 cut(s)	418
NdeII	GATC	4 cut(s)	110, 958, 1352, 1477
NlaIV	GGNNCC	4 cut(s)	159, 241, 1682, 1825
NmeAIII	GCCGAG	1 cut(s)	608
NmuCI	GTSAC	3 cut(s)	1196, 1346, 1715
NsiI	ATGCAT	1 cut(s)	418
NspI	RCATGY	4 cut(s)	89, 600, 1021, 1466
OliI	CACNNNNGTG	2 cut(s)	464, 545
PaeI	GCATGC	1 cut(s)	89
PaeR7I	CTCGAG	1 cut(s)	1656
PagI	TCATGA	1 cut(s)	757
PaqCI	CACCTGC	1 cut(s)	172
PciI	ACATGT	1 cut(s)	1462
PciSI	GCTCTTC	1 cut(s)	67
PcsI	WCGNNNNNNNCGW	1 cut(s)	1525
PctI	GAATGC	1 cut(s)	969
PdmI	GAANNNNTTC	2 cut(s)	426, 1729
PfeI	GAWTC	4 cut(s)	1181, 1292, 1613, 1730
PflMI	CCANNNNNTGG	3 cut(s)	689, 1165, 1860
PfoI	TCCNGGA	1 cut(s)	880
PmaCI	CACGTG	1 cut(s)	1436
PmlI	CACGTG	1 cut(s)	1436
Ppu21I	YACGTR	1 cut(s)	1436
PscI	ACATGT	1 cut(s)	1462
PshAI	GACNNNNGTC	1 cut(s)	255
Psp6I	CCWGG	5 cut(s)	208, 880, 911, 1027, 1586
PspCI	CACGTG	1 cut(s)	1436
PspEI	GGTNACC	1 cut(s)	187
PspFI	CCCAGC	2 cut(s)	1532, 1844
PspGI	CCWGG	5 cut(s)	208, 880, 911, 1027, 1586
PspN4I	GGNNCC	4 cut(s)	159, 241, 1682, 1825
PspPI	GGNCC	5 cut(s)	157, 206, 239, 1207, 1227
PspXI	VCTCGAGB	1 cut(s)	1656
PstI	CTGCAG	1 cut(s)	40
PstNI	CAGNNNCTG	1 cut(s)	1084
PvuII	CAGCTG	2 cut(s)	41, 838
RsaI	GTAC	5 cut(s)	1109, 1144, 1522, 1629, 1649
RsaNI	GTAC	5 cut(s)	1108, 1143, 1521, 1628, 1648
RseI	CAYNNNNRTG	2 cut(s)	464, 545
SapI	GCTCTTC	1 cut(s)	67
SaqAI	TTAA	5 cut(s)	405, 504, 828, 1389, 1563
Sau3AI	GATC	4 cut(s)	110, 958, 1352, 1477
Sau96I	GGNCC	5 cut(s)	157, 206, 239, 1207, 1227
ScaI	AGTACT	1 cut(s)	1144
ScrFI	CCNGG	6 cut(s)	210, 769, 882, 913, 1029, 1588
SduI	GDGCHC	4 cut(s)	226, 604, 697, 823
SfaNI	GCATC	2 cut(s)	403, 1596
SfcI	CTRYAG	1 cut(s)	36
Sfr274I	CTCGAG	1 cut(s)	1656
SinI	GGWCC	3 cut(s)	157, 239, 1207
SlaI	CTCGAG	1 cut(s)	1656
SmiMI	CAYNNNNRTG	2 cut(s)	464, 545
SmlI	CTYRAG	1 cut(s)	1656
SmoI	CTYRAG	1 cut(s)	1656
SphI	GCATGC	1 cut(s)	89
SsiI	CCGC	7 cut(s)	4, 288, 710, 841, 1510, 1773, 1788
SspI	AATATT	1 cut(s)	514
SspMI	CTAG	4 cut(s)	735, 947, 1140, 1442
StyD4I	CCNGG	6 cut(s)	208, 767, 880, 911, 1027, 1586
StyI	CCWWGG	1 cut(s)	268
TaaI	ACNGT	5 cut(s)	143, 257, 398, 703, 1685
TaiI	ACGT	1 cut(s)	1438
TaqI	TCGA	4 cut(s)	109, 259, 961, 1657
TatI	WGTACW	2 cut(s)	1107, 1142
TfiI	GAWTC	4 cut(s)	1181, 1292, 1613, 1730
Tru1I	TTAA	5 cut(s)	405, 504, 828, 1389, 1563
Tru9I	TTAA	5 cut(s)	405, 504, 828, 1389, 1563
TscAI	CASTG	5 cut(s)	226, 403, 655, 1060, 1861
TseFI	GTSAC	3 cut(s)	1196, 1346, 1715
Tsp45I	GTSAC	3 cut(s)	1196, 1346, 1715
TspGWI	ACGGA	1 cut(s)	125
TspRI	CASTG	5 cut(s)	226, 403, 655, 1060, 1861
Van91I	CCANNNNNTGG	3 cut(s)	689, 1165, 1860
VneI	GTGCAC	2 cut(s)	222, 693
VpaK11BI	GGWCC	3 cut(s)	157, 239, 1207
XagI	CCTNNNNNAGG	2 cut(s)	950, 1026
XapI	RAATTY	4 cut(s)	31, 753, 773, 1169
XceI	RCATGY	4 cut(s)	89, 600, 1021, 1466
XcmI	CCANNNNNNNNNTGG	1 cut(s)	611
XhoI	CTCGAG	1 cut(s)	1656
XmnI	GAANNNNTTC	2 cut(s)	426, 1729
XspI	CTAG	4 cut(s)	735, 947, 1140, 1442
ZrmI	AGTACT	1 cut(s)	1144
Zsp2I	ATGCAT	1 cut(s)	418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.