Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Reverse (-)

26176591 .. 26180224

Gene Structure 3634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023623

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGAGGTCATGGGCAGATTCTGTAGGTAATGATGGAGACAATGCAGACGCTGGTTCGTCTGAAAATAACAGCTCATCTCGTCCATCTGACAATAACAAATCATCTCGTCCATCTGACAATAACAAATCATCTCGTCCATCTGACAATAACAAATCATCTCATCCATCTGACAATAGAAGCTCATCACGCCCGTCTGACAATAGCAGCTCATCTCGTCCTGCACGATCAACTTATGTTCCGCCACATCTTCGTAATAGGCCTCCGTCTGCTGATCCTCCGGCTCCTTCACAGACTACCCTGCCAACAGTCAATGTAGGTTATAATGGGCCTGCAGCTGGGTCTGCCTGGGGTGGTGGTGGTGGTTTTAGGTCTGATGTTGGGCGTGGGGGATATGTAGGTGGTGGTGGTGGTGGTGGTCGAGGTGGTGGTGGTTGGAACAATAGAAGTGGAGGGTGGGACCGTGGGAGGGAACGGGAGGTAAATCCCTTTGCTGATGACGATAACACAGAACAGCCCTTTGAGCAAGAAAACACAGGCATCAACTTTGATGCTTATGAGGATATCCCAGTTGAAACTAGTGGATCTGATGTCCCGCCACCTGTGAATACTTTTGCAGAGATAGATCTAGGGGACGCATTGAATTTAAATATTAGGAGATGCAAGTATGTGAGGCCAACTCCTGTTCAGCGTCATGCAATACCGATCTCTCTTGCAGGACGAGATTTGATGGCCTGTGCTCAGACAGGTTCTGGCAAGACAGCTGCTTTCTGCTTTCCAATTATTAGTGGGATCATGCAGGGGCAGTATGCTCAGAGACCTCGTGGAGCACGTACTGTGTATCCTCTTGCTCTTATTCTCTCCCCTACTAGAGAACTCTCGTGTCAGATACATGAAGAAGCTAGAAAGTTTTCTTATCAAACTGGTGTCAAGGTGGTAGTTGCTTACGGAGGAGCGCCAATAAACCAACAGTTGAGAGAGCTTGAAAGAGGAGTCGATATTCTTGTGGCAACTCCGGGTCGATTGGTAGATCTGCTTGAGAGAGCTAGAGTATCATTGCAGATGATACGATATTTGGCTCTTGATGAGGCAGATCGGATGCTTGACATGGGTTTTGAGCCTCAAATAAGGAAGATAGTGGAACAGATGGACATGCCTCCCCCAGGTTTGAGACAGACCATGCTATTCAGTGCAACCTTTCCAAAGGAGATACAGAGACTGGCGTCGGATTTTCTGGCAAACTATATATTTTTGGCTGTTGGAAGGGTTGGCTCAAGTACTGATTTAATTGTTCAAAGAGTTGAATTTGTTCATGAATCTGATAAGAGAAGTCATCTCATGGACCTCCTTCACGCACAAAGGGAAAATGGAACTCATGGCAAGCAAGCTTTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCAGATGCACTGGAACACTGGTTGTGTATTAATGGGTTTCCAGCAACTACTATTCATGGTGACAGAACACAACAGGAAAGAGAACAGGCACTGAGATCATTTAAGAGTGGACATACACCAATTTTAGTGGCAACAGATGTGGCTGCACGTGGTCGGACAGGGCGAGCCGGAAAATCAGGACTTGCAACAGCATTCTTTAATGAGAACAACCTTTCGATGGCAAAACCGCTAGCTGATCTAATGCAAGAAGCAAATCAGGAAGTACCTGCTTGGATTACTCGATACGCATCGAGGGCTTCTTATGGTGGTGGTAGAAACCGGCGATCTGGTGGAGGCCGTTTTGGTGGCCGTGACTTCAGAAGGGAGAATTCTTTCAACAGGGGTTCAGATTTCTATGGAGGGGGAAATAATGGCGGTGGATATGGTGGCGGCGGCTATGGTGGTGGTGGTGGCTATGGTGGTGGGGGTTATGGCGGGGGTTCTGGTCCTAGTGCTTGGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

641

Amino Acids

68.67

Weight (kDa)

8.81

Isoelectric Point (pI)

49.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	226 - 405	1e-48	DEAD/DEAH box helicase
Helicase_C	PF00271	441 - 525	4.6e-14	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	321
Acc36I	ACCTGC	1 cut(s)	1693
AciI	CCGC	7 cut(s)	239, 593, 1646, 1833, 1848, 1851, 1893
AclWI	GGATC	3 cut(s)	266, 589, 797
AcoI	YGGCCR	1 cut(s)	1765
AcsI	RAATTY	3 cut(s)	640, 1301, 1786
AcuI	CTGAAG	1 cut(s)	1759
AcvI	CACGTG	1 cut(s)	1568
AcyI	GRCGYC	1 cut(s)	1220
AfaI	GTAC	3 cut(s)	832, 1276, 1683
AfiI	CCNNNNNNNGG	4 cut(s)	335, 466, 1160, 1636
AgsI	TTSAA	6 cut(s)	572, 640, 983, 1292, 1301, 1795
AhlI	ACTAGT	1 cut(s)	575
AjnI	CCWGG	2 cut(s)	344, 1159
Alw21I	GWGCWC	2 cut(s)	739, 829
Alw26I	GTCTC	5 cut(s)	30, 808, 1162, 1207, 1400
AlwI	GGATC	3 cut(s)	266, 589, 797
AlwNI	CAGNNNCTG	5 cut(s)	20, 50, 749, 1216, 1510
AoxI	GGCC	6 cut(s)	257, 326, 671, 729, 1753, 1765
ApeKI	GCWGC	4 cut(s)	204, 332, 761, 1562
ApoI	RAATTY	3 cut(s)	640, 1301, 1786
ArsI	GACNNNNNNTTYG	2 cut(s)	1094, 1126
AseI	ATTAAT	1 cut(s)	1449
Asp700I	GAANNNNTTC	3 cut(s)	907, 1305, 1790
AspLEI	GCGC	1 cut(s)	955
AspS9I	GGNCC	4 cut(s)	326, 457, 1339, 1904
AsuC2I	CCSGG	1 cut(s)	1014
AsuHPI	GGTGA	1 cut(s)	1490
AsuNHI	GCTAGC	1 cut(s)	1648
AvaII	GGWCC	3 cut(s)	457, 1339, 1904
BauI	CACGAG	2 cut(s)	819, 877
BbrPI	CACGTG	1 cut(s)	1568
Bbv12I	GWGCWC	2 cut(s)	739, 829
BbvI	GCAGC	4 cut(s)	216, 344, 748, 1549
BccI	CCATC	8 cut(s)	26, 91, 118, 145, 172, 721, 1138, 1630
BceAI	ACGGC	2 cut(s)	1740, 1752
BciT130I	CCWGG	2 cut(s)	346, 1161
BciVI	GTATCC	1 cut(s)	849
BcnI	CCSGG	1 cut(s)	1014
BcoDI	GTCTC	5 cut(s)	30, 808, 1162, 1207, 1400
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	8 cut(s)	576, 626, 867, 900, 1044, 1649, 1908, 1921
BfmI	CTRYAG	2 cut(s)	21, 330
BfoI	RGCGCY	1 cut(s)	956
BfuAI	ACCTGC	1 cut(s)	1693
BfuI	GTATCC	1 cut(s)	849
BglII	AGATCT	2 cut(s)	622, 1027
BisI	GCNGC	6 cut(s)	205, 333, 762, 1563, 1849, 1852
BlsI	GCNGC	6 cut(s)	206, 334, 763, 1564, 1850, 1853
BmcAI	AGTACT	1 cut(s)	1276
Bme1390I	CCNGG	3 cut(s)	346, 1014, 1161
Bme18I	GGWCC	3 cut(s)	457, 1339, 1904
BmgT120I	GGNCC	4 cut(s)	326, 457, 1339, 1904
BmiI	GGNNCC	2 cut(s)	282, 458
BmrFI	CCNGG	3 cut(s)	346, 1014, 1161
BmrI	ACTGGG	1 cut(s)	560
BmsI	GCATC	6 cut(s)	538, 546, 647, 1086, 1414, 1715
BmtI	GCTAGC	1 cut(s)	1652
BmuI	ACTGGG	1 cut(s)	560
BoxI	GACNNNNGTC	1 cut(s)	1219
BplI	GAGNNNNNCTC	2 cut(s)	661, 693
BpuEI	CTTGAG	2 cut(s)	1055, 1255
BpuMI	CCSGG	1 cut(s)	1014
BsaAI	YACGTR	2 cut(s)	830, 1568
BsaBI	GATNNNNATC	1 cut(s)	1705
BsaHI	GRCGYC	1 cut(s)	1220
BsaI	GGTCTC	1 cut(s)	808
BsaJI	CCNNGG	3 cut(s)	345, 460, 1159
Bsc4I	CCNNNNNNNGG	4 cut(s)	335, 466, 1160, 1636
Bse118I	RCCGGY	1 cut(s)	1737
Bse1I	ACTGG	5 cut(s)	566, 925, 1221, 1434, 1442
Bse3DI	GCAATG	1 cut(s)	1052
Bse8I	GATNNNNATC	1 cut(s)	1705
BseBI	CCWGG	2 cut(s)	346, 1161
BseDI	CCNNGG	3 cut(s)	345, 460, 1159
BseGI	GGATG	2 cut(s)	160, 1101
BseJI	GATNNNNATC	1 cut(s)	1705
BseLI	CCNNNNNNNGG	4 cut(s)	335, 466, 1160, 1636
BseMI	GCAATG	1 cut(s)	1052
BseMII	CTCAG	3 cut(s)	752, 824, 1502
BseNI	ACTGG	5 cut(s)	566, 925, 1221, 1434, 1442
BseRI	GAGGAG	2 cut(s)	963, 1002
BseXI	GCAGC	4 cut(s)	216, 344, 748, 1549
BseYI	CCCAGC	1 cut(s)	335
BsgI	GTGCAG	2 cut(s)	204, 1548
BshFI	GGCC	6 cut(s)	259, 328, 673, 731, 1755, 1767
BsiHKAI	GWGCWC	2 cut(s)	739, 829
BsiSI	CCGG	4 cut(s)	278, 1013, 1587, 1738
BslFI	GGGAC	3 cut(s)	470, 575, 644
BslI	CCNNNNNNNGG	4 cut(s)	335, 466, 1160, 1636
BsmAI	GTCTC	5 cut(s)	30, 808, 1162, 1207, 1400
BsmFI	GGGAC	3 cut(s)	470, 575, 644
BsmI	GAATGC	1 cut(s)	1610
BsnI	GGCC	6 cut(s)	259, 328, 673, 731, 1755, 1767
Bso31I	GGTCTC	1 cut(s)	808
Bsp1286I	GDGCHC	2 cut(s)	739, 829
BspACI	CCGC	7 cut(s)	239, 593, 1646, 1833, 1848, 1851, 1893
BspANI	GGCC	6 cut(s)	259, 328, 673, 731, 1755, 1767
BspCNI	CTCAG	3 cut(s)	751, 823, 1503
BspHI	TCATGA	1 cut(s)	1309
BspLI	GGNNCC	2 cut(s)	282, 458
BspMAI	CTGCAG	1 cut(s)	334
BspMI	ACCTGC	1 cut(s)	1693
BspOI	GCTAGC	1 cut(s)	1652
BspPI	GGATC	3 cut(s)	266, 589, 797
BspTNI	GGTCTC	1 cut(s)	808
BsrDI	GCAATG	1 cut(s)	1052
BsrFI	RCCGGY	1 cut(s)	1737
BsrI	ACTGG	5 cut(s)	566, 925, 1221, 1434, 1442
BssAI	RCCGGY	1 cut(s)	1737
BssECI	CCNNGG	3 cut(s)	345, 460, 1159
BssNI	GRCGYC	1 cut(s)	1220
BssSI	CACGAG	2 cut(s)	819, 877
Bst2BI	CACGAG	2 cut(s)	819, 877
Bst2UI	CCWGG	2 cut(s)	346, 1161
Bst4CI	ACNGT	4 cut(s)	307, 461, 835, 969
BstACI	GRCGYC	1 cut(s)	1220
BstBAI	YACGTR	2 cut(s)	830, 1568
BstC8I	GCNNGC	5 cut(s)	330, 1379, 1383, 1584, 1650
BstDEI	CTNAG	3 cut(s)	738, 810, 1511
BstDSI	CCRYGG	1 cut(s)	460
BstENI	CCTNNNNNAGG	1 cut(s)	1158
BstF5I	GGATG	2 cut(s)	160, 1101
BstH2I	RGCGCY	1 cut(s)	956
BstHHI	GCGC	1 cut(s)	955
BstMAI	GTCTC	5 cut(s)	30, 808, 1162, 1207, 1400
BstMWI	GCNNNNNNNGC	4 cut(s)	186, 341, 520, 1712
BstNI	CCWGG	2 cut(s)	346, 1161
BstNSI	RCATGY	1 cut(s)	1153
BstPAI	GACNNNNGTC	1 cut(s)	1219
BstSCI	CCNGG	3 cut(s)	344, 1012, 1159
BstSFI	CTRYAG	2 cut(s)	21, 330
BstV1I	GCAGC	4 cut(s)	216, 344, 748, 1549
BstX2I	RGATCY	3 cut(s)	581, 622, 1027
BstYI	RGATCY	3 cut(s)	581, 622, 1027
BsuI	GTATCC	1 cut(s)	849
BsuRI	GGCC	6 cut(s)	259, 328, 673, 731, 1755, 1767
BtgI	CCRYGG	1 cut(s)	460
BtsCI	GGATG	2 cut(s)	160, 1101
BtsIMutI	CAGTG	4 cut(s)	1192, 1427, 1435, 1508
BveI	ACCTGC	1 cut(s)	1693
Cac8I	GCNNGC	5 cut(s)	330, 1379, 1383, 1584, 1650
CaiI	CAGNNNCTG	5 cut(s)	20, 50, 749, 1216, 1510
CciI	TCATGA	1 cut(s)	1309
CfoI	GCGC	1 cut(s)	955
Cfr10I	RCCGGY	1 cut(s)	1737
Cfr13I	GGNCC	4 cut(s)	326, 457, 1339, 1904
CseI	GACGC	4 cut(s)	56, 641, 677, 1209
Csp6I	GTAC	3 cut(s)	831, 1275, 1682
CspCI	CAANNNNNGTGG	6 cut(s)	427, 462, 1527, 1539, 1562, 1574
CviQI	GTAC	3 cut(s)	831, 1275, 1682
DdeI	CTNAG	3 cut(s)	738, 810, 1511
DraI	TTTAAA	1 cut(s)	645
EaeI	YGGCCR	1 cut(s)	1765
EciI	GGCGGA	1 cut(s)	228
Eco147I	AGGCCT	1 cut(s)	259
Eco31I	GGTCTC	1 cut(s)	808
Eco32I	GATATC	1 cut(s)	562
Eco47I	GGWCC	3 cut(s)	457, 1339, 1904
Eco57I	CTGAAG	1 cut(s)	1759
Eco72I	CACGTG	1 cut(s)	1568
EcoNI	CCTNNNNNAGG	1 cut(s)	1158
EcoRI	GAATTC	1 cut(s)	1786
EcoRII	CCWGG	2 cut(s)	344, 1159
EcoRV	GATATC	1 cut(s)	562
FaqI	GGGAC	3 cut(s)	470, 575, 644
FauI	CCCGC	2 cut(s)	600, 1886
Fnu4HI	GCNGC	6 cut(s)	205, 333, 762, 1563, 1849, 1852
FokI	GGATG	2 cut(s)	147, 1108
Fsp4HI	GCNGC	6 cut(s)	205, 333, 762, 1563, 1849, 1852
FspBI	CTAG	8 cut(s)	576, 626, 867, 900, 1044, 1649, 1908, 1921
GlaI	GCGC	1 cut(s)	954
GluI	GCNGC	6 cut(s)	205, 333, 762, 1563, 1849, 1852
GsaI	CCCAGC	1 cut(s)	339
HaeII	RGCGCY	1 cut(s)	956
HaeIII	GGCC	6 cut(s)	259, 328, 673, 731, 1755, 1767
HapII	CCGG	4 cut(s)	278, 1013, 1587, 1738
HgaI	GACGC	4 cut(s)	56, 641, 677, 1209
HhaI	GCGC	1 cut(s)	955
Hin1I	GRCGYC	1 cut(s)	1220
Hin6I	GCGC	1 cut(s)	953
HinP1I	GCGC	1 cut(s)	953
HindIII	AAGCTT	1 cut(s)	1383
HinfI	GANTC	3 cut(s)	17, 990, 1313
HpaII	CCGG	4 cut(s)	278, 1013, 1587, 1738
HphI	GGTGA	1 cut(s)	1490
Hpy166II	GTNNAC	1 cut(s)	1529
Hpy188III	TCNNGA	4 cut(s)	1079, 1310, 1596, 1676
Hpy8I	GTNNAC	1 cut(s)	1529
Hpy99I	CGWCG	1 cut(s)	1225
HpyAV	CCTTC	5 cut(s)	294, 1254, 1355, 1408, 1773
HpyCH4III	ACNGT	4 cut(s)	307, 461, 835, 969
HpyCH4IV	ACGT	2 cut(s)	829, 1567
HpyF10VI	GCNNNNNNNGC	4 cut(s)	186, 341, 520, 1712
HpyF3I	CTNAG	3 cut(s)	738, 810, 1511
HpySE526I	ACGT	2 cut(s)	829, 1567
Hsp92I	GRCGYC	1 cut(s)	1220
HspAI	GCGC	1 cut(s)	953
LmnI	GCTCC	4 cut(s)	286, 824, 950, 1418
Lsp1109I	GCAGC	4 cut(s)	216, 344, 748, 1549
LweI	GCATC	6 cut(s)	538, 546, 647, 1086, 1414, 1715
MaeI	CTAG	8 cut(s)	576, 626, 867, 900, 1044, 1649, 1908, 1921
MaeII	ACGT	2 cut(s)	829, 1567
MaeIII	GTNAC	2 cut(s)	1478, 1769
MboII	GAAGA	3 cut(s)	239, 905, 1141
MflI	RGATCY	3 cut(s)	581, 622, 1027
MhlI	GDGCHC	2 cut(s)	739, 829
MluCI	AATT	6 cut(s)	640, 777, 1284, 1301, 1539, 1786
MlyI	GAGTC	1 cut(s)	999
MmeI	TCCRAC	4 cut(s)	413, 1203, 1237, 1553
MroXI	GAANNNNTTC	3 cut(s)	907, 1305, 1790
MseI	TTAA	5 cut(s)	644, 1283, 1449, 1521, 1617
MspA1I	CMGCKG	2 cut(s)	335, 761
MspI	CCGG	4 cut(s)	278, 1013, 1587, 1738
MspR9I	CCNGG	3 cut(s)	346, 1014, 1161
Mva1269I	GAATGC	1 cut(s)	1610
MvaI	CCWGG	2 cut(s)	346, 1161
MwoI	GCNNNNNNNGC	4 cut(s)	186, 341, 520, 1712
NciI	CCSGG	1 cut(s)	1014
NheI	GCTAGC	1 cut(s)	1648
NlaIV	GGNNCC	2 cut(s)	282, 458
NmuCI	GTSAC	2 cut(s)	1478, 1769
NspI	RCATGY	1 cut(s)	1153
PagI	TCATGA	1 cut(s)	1309
PceI	AGGCCT	1 cut(s)	259
PcsI	WCGNNNNNNNCGW	3 cut(s)	220, 826, 1579
PctI	GAATGC	1 cut(s)	1610
PdmI	GAANNNNTTC	3 cut(s)	907, 1305, 1790
PfeI	GAWTC	2 cut(s)	17, 1313
PkrI	GCNGC	6 cut(s)	206, 334, 763, 1564, 1850, 1853
PleI	GAGTC	1 cut(s)	998
PmaCI	CACGTG	1 cut(s)	1568
PmlI	CACGTG	1 cut(s)	1568
PpsI	GAGTC	1 cut(s)	998
Ppu21I	YACGTR	2 cut(s)	830, 1568
PshAI	GACNNNNGTC	1 cut(s)	1219
PshBI	ATTAAT	1 cut(s)	1449
PsiI	TTATAA	1 cut(s)	321
Psp6I	CCWGG	2 cut(s)	344, 1159
PspCI	CACGTG	1 cut(s)	1568
PspFI	CCCAGC	1 cut(s)	335
PspGI	CCWGG	2 cut(s)	344, 1159
PspN4I	GGNNCC	2 cut(s)	282, 458
PspPI	GGNCC	4 cut(s)	326, 457, 1339, 1904
PstI	CTGCAG	1 cut(s)	334
PstNI	CAGNNNCTG	5 cut(s)	20, 50, 749, 1216, 1510
PsuI	RGATCY	3 cut(s)	581, 622, 1027
PvuII	CAGCTG	2 cut(s)	335, 761
RsaI	GTAC	3 cut(s)	832, 1276, 1683
RsaNI	GTAC	3 cut(s)	831, 1275, 1682
SaqAI	TTAA	5 cut(s)	644, 1283, 1449, 1521, 1617
SatI	GCNGC	6 cut(s)	205, 333, 762, 1563, 1849, 1852
Sau96I	GGNCC	4 cut(s)	326, 457, 1339, 1904
ScaI	AGTACT	1 cut(s)	1276
SchI	GAGTC	1 cut(s)	999
ScrFI	CCNGG	3 cut(s)	346, 1014, 1161
SduI	GDGCHC	2 cut(s)	739, 829
SfaNI	GCATC	6 cut(s)	538, 546, 647, 1086, 1414, 1715
SfcI	CTRYAG	2 cut(s)	21, 330
SinI	GGWCC	3 cut(s)	457, 1339, 1904
SmiI	ATTTAAAT	1 cut(s)	645
SmlI	CTYRAG	2 cut(s)	1034, 1270
SmoI	CTYRAG	2 cut(s)	1034, 1270
SpeI	ACTAGT	1 cut(s)	575
Sse9I	AATT	6 cut(s)	640, 777, 1284, 1301, 1539, 1786
SseBI	AGGCCT	1 cut(s)	259
SsiI	CCGC	7 cut(s)	239, 593, 1646, 1833, 1848, 1851, 1893
SspI	AATATT	1 cut(s)	649
SspMI	CTAG	8 cut(s)	576, 626, 867, 900, 1044, 1649, 1908, 1921
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	3 cut(s)	344, 1012, 1159
SwaI	ATTTAAAT	1 cut(s)	645
TaaI	ACNGT	4 cut(s)	307, 461, 835, 969
TaiI	ACGT	2 cut(s)	832, 1570
TaqI	TCGA	6 cut(s)	418, 993, 1018, 1634, 1699, 1709
TasI	AATT	6 cut(s)	640, 777, 1284, 1301, 1539, 1786
TatI	WGTACW	1 cut(s)	1274
TauI	GCSGC	2 cut(s)	1851, 1854
TfiI	GAWTC	2 cut(s)	17, 1313
Tru1I	TTAA	5 cut(s)	644, 1283, 1449, 1521, 1617
Tru9I	TTAA	5 cut(s)	644, 1283, 1449, 1521, 1617
TscAI	CASTG	4 cut(s)	1192, 1434, 1442, 1515
TseFI	GTSAC	2 cut(s)	1478, 1769
TseI	GCWGC	4 cut(s)	204, 332, 761, 1562
Tsp45I	GTSAC	2 cut(s)	1478, 1769
TspDTI	ATGAA	4 cut(s)	906, 1298, 1326, 1463
TspGWI	ACGGA	2 cut(s)	252, 960
TspRI	CASTG	4 cut(s)	1192, 1434, 1442, 1515
VpaK11BI	GGWCC	3 cut(s)	457, 1339, 1904
VspI	ATTAAT	1 cut(s)	1449
XagI	CCTNNNNNAGG	1 cut(s)	1158
XapI	RAATTY	3 cut(s)	640, 1301, 1786
XceI	RCATGY	1 cut(s)	1153
XmnI	GAANNNNTTC	3 cut(s)	907, 1305, 1790
XspI	CTAG	8 cut(s)	576, 626, 867, 900, 1044, 1649, 1908, 1921
ZrmI	AGTACT	1 cut(s)	1276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.