Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Forward (+)

22899701 .. 22903405

Gene Structure 3705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G019790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGAGGTCATGGGCAGATTCTGTAGGTAATGATGGAGACAATGCAGACGCTGGTTCGTCTGAAAATAACAGCTCATCTCATCCATCTGACAATAGAAGCTCATCGCGCCTGTCTGACAATAGCAGCTCATCTCGTCCTGCACGATCAACTTATGTTCCGCCACATCTTCGTAATAGGCCTCCGTCTGCTGATCCTCCGGCTCCTTCACAGACTACCCTGCCACCAGCCAATGTAGGTTATAATGGGCCTGCAGCTGGGTCTGCCTGGGGTGGTGGTGGTGGTTTTAGGTCTGATGTTGGGCGTGGGGGATATGTAGGTAGTGGCGGTGGCGGTGGCGGTGGCGGTGGTCGAGGTGGTGGTGGTTGGAACAATAGAAGTGGAGGGTGGGACCGTGGGAGGGAACGGGAGGTAAATCCCTTTGCTGATGACGATAACACAGAACAGCCCTTTGAGCAAGAAAACACAGGCATCAACTTTGATGCTTATGAGGATATCCCAGTTGAAACTAGTGGATCTGATGTCCCGCCACCTGTGAATACTTTTGCAGAGATAGATCTAGGGGACGCATTGAATTTAAATATTAGGAGATGCAAGTATGTGAGGCCAACTCCTGTTCAGCGTCATGCAATACCGATCTCTCTTGCTGGACGAGATTTGATGGCCTGTGCTCAGACAGGTTCTGGCAAGACAGCTGCTTTCTGCTTTCCAATTATTAGTGGGATCATGCAGGAGCAGTATGCTCAGAGACCTCGTGGAGCACGTACAGTGTATCCTCTTGCTCTTATTCTCTCCCCTACTAGAGAACTCTCATGTCAGATACATGAAGAAGCTAGAAAGTTTTCTTATCAAACTGGTGTCAAGGTGGTAGTTGCTTACGGAGGAGCGCCAATAAACCAACAGTTGAGAGAGCTTGAAAGAGGAGTAGATATTCTTGTGGCAACTCCGGGTCGATTGGTAGATCTGCTTGAGAGAGCTAGAGTATCATTGCAGATGATACGATATTTGGCTCTTGATGAGGCAGATCGGATGCTGGACATGGGTTTTGAGCCTCAAATTAGGAAGATAGTGGAACAGATGGACATGCCTCCGCCAGGTTTGAGACAGACCATGCTATTCAGTGCAACCTTTCCAAAGGAGATACAGAGACTGGCGTCGGATTTTCTGGCAAACTATATATTTTTGGCTGTTGGAAGGGTTGGCTCAAGTACTGATTTAATTGTTCAAAGAGTTGAATTTGTTCATGAATCTGATAAGAGAAGTCATCTCATGGACCTCCTTCACGCACAAAGGGAAAATGGAACTCATGGCAAGCAAGCTTTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCAGATGCACTGGAACACTGGTTGTGTATTAATGGGTTTCCGGCAACTACTATTCATGGTGACAGAACACAACAGGAAAGAGAACAGGCACTGAGATCATTCAAGAGTGGACATACACCAATTTTAGTGGCAACAGATGTGGCTGCACGTGGTCTGGACATTCCCCATGTAGCTCACGTGGTAAATTTTGATCTTCCAAATGACATTGATGATTATGTTCACCGGATAGGTCGGACAGGGCGAGCTGGAAAATCAGGACTTGCAACAGCATTCTTTAATGAGAACAACCTTTCGATGGCAAAACCACTAGCTGATCTAATGCAAGAAGCAAATCAGGAAGTGCCTGCTTGGATTACTCGATACGCATCGAGGGCTTCTTATGGTGGTGGTAGAAACCGGCGATCTGGGGGAGGCCGTTTTGGTGGCCGTGACTTCAGAAGGGAGAATTCTTTTAACAGGGGTTCAGATTTCTATGGAGGGGGAAATAATGGCGGTGGATATGGTGGCGGCGGCTATGGTGGTGGGGGCTATGGTGGTGGGGGTTATGGCGGTGGTACTGGTCCTAGTGCTTGGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

642

Amino Acids

68.94

Weight (kDa)

6.56

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	203 - 382	8.9e-49	DEAD/DEAH box helicase
Helicase_C	PF00271	418 - 533	1.7e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	240
AccII	CGCG	1 cut(s)	106
AclWI	GGATC	3 cut(s)	185, 520, 728
AcoI	YGGCCR	1 cut(s)	1774
AcsI	RAATTY	4 cut(s)	571, 1232, 1534, 1795
AcuI	CTGAAG	1 cut(s)	1768
AcvI	CACGTG	2 cut(s)	1499, 1528
AcyI	GRCGYC	1 cut(s)	1151
AfaI	GTAC	3 cut(s)	763, 1207, 1906
AfiI	CCNNNNNNNGG	4 cut(s)	254, 397, 1091, 1645
AgsI	TTSAA	6 cut(s)	503, 571, 914, 1223, 1232, 1453
AhlI	ACTAGT	1 cut(s)	506
AjnI	CCWGG	2 cut(s)	263, 1090
Alw21I	GWGCWC	2 cut(s)	670, 760
Alw26I	GTCTC	5 cut(s)	30, 739, 1093, 1138, 1331
AlwI	GGATC	3 cut(s)	185, 520, 728
AlwNI	CAGNNNCTG	5 cut(s)	20, 50, 680, 1147, 1441
AoxI	GGCC	6 cut(s)	176, 245, 602, 660, 1762, 1774
ApeKI	GCWGC	4 cut(s)	123, 251, 692, 1493
ApoI	RAATTY	4 cut(s)	571, 1232, 1534, 1795
ArsI	GACNNNNNNTTYG	2 cut(s)	1025, 1057
AseI	ATTAAT	1 cut(s)	1380
Asp700I	GAANNNNTTC	2 cut(s)	838, 1236
AspLEI	GCGC	2 cut(s)	108, 886
AspS9I	GGNCC	4 cut(s)	245, 388, 1270, 1910
AsuC2I	CCSGG	1 cut(s)	945
AsuHPI	GGTGA	2 cut(s)	1421, 1562
AvaII	GGWCC	3 cut(s)	388, 1270, 1910
BauI	CACGAG	1 cut(s)	750
BbrPI	CACGTG	2 cut(s)	1499, 1528
Bbv12I	GWGCWC	2 cut(s)	670, 760
BbvI	GCAGC	4 cut(s)	135, 263, 679, 1480
BccI	CCATC	5 cut(s)	26, 91, 652, 1069, 1639
BceAI	ACGGC	2 cut(s)	1749, 1761
BciT130I	CCWGG	2 cut(s)	265, 1092
BciVI	GTATCC	1 cut(s)	780
BcnI	CCSGG	1 cut(s)	945
BcoDI	GTCTC	5 cut(s)	30, 739, 1093, 1138, 1331
BcuI	ACTAGT	1 cut(s)	506
BfaI	CTAG	8 cut(s)	507, 557, 798, 831, 975, 1658, 1914, 1927
BfmI	CTRYAG	2 cut(s)	21, 249
BfoI	RGCGCY	1 cut(s)	887
BfuI	GTATCC	1 cut(s)	780
BglII	AGATCT	2 cut(s)	553, 958
BisI	GCNGC	6 cut(s)	124, 252, 693, 1494, 1858, 1861
BlsI	GCNGC	6 cut(s)	125, 253, 694, 1495, 1859, 1862
BmcAI	AGTACT	1 cut(s)	1207
Bme1390I	CCNGG	3 cut(s)	265, 945, 1092
Bme18I	GGWCC	3 cut(s)	388, 1270, 1910
BmgT120I	GGNCC	4 cut(s)	245, 388, 1270, 1910
BmiI	GGNNCC	2 cut(s)	201, 389
BmrFI	CCNGG	3 cut(s)	265, 945, 1092
BmrI	ACTGGG	1 cut(s)	491
BmsI	GCATC	6 cut(s)	469, 477, 578, 1017, 1345, 1724
BmuI	ACTGGG	1 cut(s)	491
BoxI	GACNNNNGTC	1 cut(s)	1150
BplI	GAGNNNNNCTC	2 cut(s)	592, 624
BpuEI	CTTGAG	2 cut(s)	986, 1186
BpuMI	CCSGG	1 cut(s)	945
BsaAI	YACGTR	3 cut(s)	761, 1499, 1528
BsaBI	GATNNNNATC	1 cut(s)	1714
BsaHI	GRCGYC	1 cut(s)	1151
BsaI	GGTCTC	1 cut(s)	739
BsaJI	CCNNGG	2 cut(s)	264, 391
BsaWI	WCCGGW	1 cut(s)	1572
Bsc4I	CCNNNNNNNGG	4 cut(s)	254, 397, 1091, 1645
Bse118I	RCCGGY	1 cut(s)	1746
Bse1I	ACTGG	6 cut(s)	497, 856, 1152, 1365, 1373, 1912
Bse3DI	GCAATG	1 cut(s)	983
Bse8I	GATNNNNATC	1 cut(s)	1714
BseBI	CCWGG	2 cut(s)	265, 1092
BseDI	CCNNGG	2 cut(s)	264, 391
BseGI	GGATG	2 cut(s)	79, 1032
BseJI	GATNNNNATC	1 cut(s)	1714
BseLI	CCNNNNNNNGG	4 cut(s)	254, 397, 1091, 1645
BseMI	GCAATG	1 cut(s)	983
BseMII	CTCAG	3 cut(s)	683, 755, 1433
BseNI	ACTGG	6 cut(s)	497, 856, 1152, 1365, 1373, 1912
BseRI	GAGGAG	2 cut(s)	894, 933
BseXI	GCAGC	4 cut(s)	135, 263, 679, 1480
BseYI	CCCAGC	1 cut(s)	254
BsgI	GTGCAG	2 cut(s)	123, 1479
Bsh1236I	CGCG	1 cut(s)	106
BshFI	GGCC	6 cut(s)	178, 247, 604, 662, 1764, 1776
BsiHKAI	GWGCWC	2 cut(s)	670, 760
BsiSI	CCGG	5 cut(s)	197, 944, 1391, 1573, 1747
BslFI	GGGAC	3 cut(s)	401, 506, 575
BslI	CCNNNNNNNGG	4 cut(s)	254, 397, 1091, 1645
BsmAI	GTCTC	5 cut(s)	30, 739, 1093, 1138, 1331
BsmFI	GGGAC	3 cut(s)	401, 506, 575
BsmI	GAATGC	1 cut(s)	1619
BsnI	GGCC	6 cut(s)	178, 247, 604, 662, 1764, 1776
Bso31I	GGTCTC	1 cut(s)	739
Bsp1286I	GDGCHC	2 cut(s)	670, 760
BspANI	GGCC	6 cut(s)	178, 247, 604, 662, 1764, 1776
BspCNI	CTCAG	3 cut(s)	682, 754, 1434
BspFNI	CGCG	1 cut(s)	106
BspHI	TCATGA	1 cut(s)	1240
BspLI	GGNNCC	2 cut(s)	201, 389
BspMAI	CTGCAG	1 cut(s)	253
BspPI	GGATC	3 cut(s)	185, 520, 728
BspTNI	GGTCTC	1 cut(s)	739
BsrDI	GCAATG	1 cut(s)	983
BsrFI	RCCGGY	1 cut(s)	1746
BsrI	ACTGG	6 cut(s)	497, 856, 1152, 1365, 1373, 1912
BssAI	RCCGGY	1 cut(s)	1746
BssECI	CCNNGG	2 cut(s)	264, 391
BssNI	GRCGYC	1 cut(s)	1151
BssSI	CACGAG	1 cut(s)	750
Bst2BI	CACGAG	1 cut(s)	750
Bst2UI	CCWGG	2 cut(s)	265, 1092
Bst4CI	ACNGT	3 cut(s)	392, 766, 900
BstACI	GRCGYC	1 cut(s)	1151
BstBAI	YACGTR	3 cut(s)	761, 1499, 1528
BstC8I	GCNNGC	5 cut(s)	249, 1310, 1314, 1593, 1695
BstDEI	CTNAG	3 cut(s)	669, 741, 1442
BstDSI	CCRYGG	1 cut(s)	391
BstENI	CCTNNNNNAGG	1 cut(s)	1089
BstF5I	GGATG	2 cut(s)	79, 1032
BstFNI	CGCG	1 cut(s)	106
BstH2I	RGCGCY	1 cut(s)	887
BstHHI	GCGC	2 cut(s)	108, 886
BstMAI	GTCTC	5 cut(s)	30, 739, 1093, 1138, 1331
BstMWI	GCNNNNNNNGC	4 cut(s)	105, 260, 451, 1721
BstNI	CCWGG	2 cut(s)	265, 1092
BstNSI	RCATGY	1 cut(s)	1084
BstPAI	GACNNNNGTC	1 cut(s)	1150
BstSCI	CCNGG	3 cut(s)	263, 943, 1090
BstSFI	CTRYAG	2 cut(s)	21, 249
BstUI	CGCG	1 cut(s)	106
BstV1I	GCAGC	4 cut(s)	135, 263, 679, 1480
BstX2I	RGATCY	3 cut(s)	512, 553, 958
BstYI	RGATCY	3 cut(s)	512, 553, 958
BsuI	GTATCC	1 cut(s)	780
BsuRI	GGCC	6 cut(s)	178, 247, 604, 662, 1764, 1776
BtgI	CCRYGG	1 cut(s)	391
BtgZI	GCGATG	1 cut(s)	87
BtsCI	GGATG	2 cut(s)	79, 1032
BtsIMutI	CAGTG	5 cut(s)	771, 1123, 1358, 1366, 1439
Cac8I	GCNNGC	5 cut(s)	249, 1310, 1314, 1593, 1695
CaiI	CAGNNNCTG	5 cut(s)	20, 50, 680, 1147, 1441
CciI	TCATGA	1 cut(s)	1240
CfoI	GCGC	2 cut(s)	108, 886
Cfr10I	RCCGGY	1 cut(s)	1746
Cfr13I	GGNCC	4 cut(s)	245, 388, 1270, 1910
CseI	GACGC	4 cut(s)	56, 572, 608, 1140
Csp6I	GTAC	3 cut(s)	762, 1206, 1905
CspCI	CAANNNNNGTGG	6 cut(s)	358, 393, 1458, 1470, 1493, 1505
CviQI	GTAC	3 cut(s)	762, 1206, 1905
DdeI	CTNAG	3 cut(s)	669, 741, 1442
DraI	TTTAAA	1 cut(s)	576
EaeI	YGGCCR	1 cut(s)	1774
EciI	GGCGGA	2 cut(s)	147, 1077
Eco147I	AGGCCT	1 cut(s)	178
Eco31I	GGTCTC	1 cut(s)	739
Eco32I	GATATC	1 cut(s)	493
Eco47I	GGWCC	3 cut(s)	388, 1270, 1910
Eco57I	CTGAAG	1 cut(s)	1768
Eco72I	CACGTG	2 cut(s)	1499, 1528
EcoNI	CCTNNNNNAGG	1 cut(s)	1089
EcoRI	GAATTC	1 cut(s)	1795
EcoRII	CCWGG	2 cut(s)	263, 1090
EcoRV	GATATC	1 cut(s)	493
FaqI	GGGAC	3 cut(s)	401, 506, 575
FauI	CCCGC	1 cut(s)	531
Fnu4HI	GCNGC	6 cut(s)	124, 252, 693, 1494, 1858, 1861
FokI	GGATG	2 cut(s)	66, 1039
Fsp4HI	GCNGC	6 cut(s)	124, 252, 693, 1494, 1858, 1861
FspBI	CTAG	8 cut(s)	507, 557, 798, 831, 975, 1658, 1914, 1927
GlaI	GCGC	2 cut(s)	107, 885
GluI	GCNGC	6 cut(s)	124, 252, 693, 1494, 1858, 1861
GsaI	CCCAGC	1 cut(s)	258
HaeII	RGCGCY	1 cut(s)	887
HaeIII	GGCC	6 cut(s)	178, 247, 604, 662, 1764, 1776
HapII	CCGG	5 cut(s)	197, 944, 1391, 1573, 1747
HgaI	GACGC	4 cut(s)	56, 572, 608, 1140
HhaI	GCGC	2 cut(s)	108, 886
Hin1I	GRCGYC	1 cut(s)	1151
Hin6I	GCGC	2 cut(s)	106, 884
HinP1I	GCGC	2 cut(s)	106, 884
HindIII	AAGCTT	1 cut(s)	1314
HinfI	GANTC	2 cut(s)	17, 1244
HpaII	CCGG	5 cut(s)	197, 944, 1391, 1573, 1747
HphI	GGTGA	2 cut(s)	1421, 1562
Hpy166II	GTNNAC	2 cut(s)	1460, 1570
Hpy188III	TCNNGA	6 cut(s)	1010, 1241, 1453, 1505, 1605, 1685
Hpy8I	GTNNAC	2 cut(s)	1460, 1570
Hpy99I	CGWCG	1 cut(s)	1156
HpyAV	CCTTC	5 cut(s)	213, 1185, 1286, 1339, 1782
HpyCH4III	ACNGT	3 cut(s)	392, 766, 900
HpyCH4IV	ACGT	3 cut(s)	760, 1498, 1527
HpyF10VI	GCNNNNNNNGC	4 cut(s)	105, 260, 451, 1721
HpyF3I	CTNAG	3 cut(s)	669, 741, 1442
HpySE526I	ACGT	3 cut(s)	760, 1498, 1527
Hsp92I	GRCGYC	1 cut(s)	1151
HspAI	GCGC	2 cut(s)	106, 884
LmnI	GCTCC	5 cut(s)	205, 730, 755, 881, 1349
Lsp1109I	GCAGC	4 cut(s)	135, 263, 679, 1480
LweI	GCATC	6 cut(s)	469, 477, 578, 1017, 1345, 1724
MaeI	CTAG	8 cut(s)	507, 557, 798, 831, 975, 1658, 1914, 1927
MaeII	ACGT	3 cut(s)	760, 1498, 1527
MaeIII	GTNAC	2 cut(s)	1409, 1778
MboII	GAAGA	4 cut(s)	158, 836, 1072, 1535
MflI	RGATCY	3 cut(s)	512, 553, 958
MhlI	GDGCHC	2 cut(s)	670, 760
MluCI	AATT	8 cut(s)	571, 708, 1053, 1215, 1232, 1470, 1534, 1795
MmeI	TCCRAC	4 cut(s)	344, 1134, 1168, 1562
MroXI	GAANNNNTTC	2 cut(s)	838, 1236
MseI	TTAA	5 cut(s)	575, 1214, 1380, 1626, 1803
MspA1I	CMGCKG	2 cut(s)	254, 692
MspI	CCGG	5 cut(s)	197, 944, 1391, 1573, 1747
MspR9I	CCNGG	3 cut(s)	265, 945, 1092
Mva1269I	GAATGC	1 cut(s)	1619
MvaI	CCWGG	2 cut(s)	265, 1092
MvnI	CGCG	1 cut(s)	106
MwoI	GCNNNNNNNGC	4 cut(s)	105, 260, 451, 1721
NciI	CCSGG	1 cut(s)	945
NlaIV	GGNNCC	2 cut(s)	201, 389
NmuCI	GTSAC	2 cut(s)	1409, 1778
NspI	RCATGY	1 cut(s)	1084
PagI	TCATGA	1 cut(s)	1240
PceI	AGGCCT	1 cut(s)	178
PcsI	WCGNNNNNNNCGW	3 cut(s)	139, 757, 1588
PctI	GAATGC	1 cut(s)	1619
PdmI	GAANNNNTTC	2 cut(s)	838, 1236
PfeI	GAWTC	2 cut(s)	17, 1244
PkrI	GCNGC	6 cut(s)	125, 253, 694, 1495, 1859, 1862
PmaCI	CACGTG	2 cut(s)	1499, 1528
PmlI	CACGTG	2 cut(s)	1499, 1528
Ppu21I	YACGTR	3 cut(s)	761, 1499, 1528
PshAI	GACNNNNGTC	1 cut(s)	1150
PshBI	ATTAAT	1 cut(s)	1380
PsiI	TTATAA	1 cut(s)	240
Psp6I	CCWGG	2 cut(s)	263, 1090
PspCI	CACGTG	2 cut(s)	1499, 1528
PspFI	CCCAGC	1 cut(s)	254
PspGI	CCWGG	2 cut(s)	263, 1090
PspN4I	GGNNCC	2 cut(s)	201, 389
PspPI	GGNCC	4 cut(s)	245, 388, 1270, 1910
PstI	CTGCAG	1 cut(s)	253
PstNI	CAGNNNCTG	5 cut(s)	20, 50, 680, 1147, 1441
PsuI	RGATCY	3 cut(s)	512, 553, 958
PvuII	CAGCTG	2 cut(s)	254, 692
RsaI	GTAC	3 cut(s)	763, 1207, 1906
RsaNI	GTAC	3 cut(s)	762, 1206, 1905
SaqAI	TTAA	5 cut(s)	575, 1214, 1380, 1626, 1803
SatI	GCNGC	6 cut(s)	124, 252, 693, 1494, 1858, 1861
Sau96I	GGNCC	4 cut(s)	245, 388, 1270, 1910
ScaI	AGTACT	1 cut(s)	1207
ScrFI	CCNGG	3 cut(s)	265, 945, 1092
SduI	GDGCHC	2 cut(s)	670, 760
SfaNI	GCATC	6 cut(s)	469, 477, 578, 1017, 1345, 1724
SfcI	CTRYAG	2 cut(s)	21, 249
SinI	GGWCC	3 cut(s)	388, 1270, 1910
SmiI	ATTTAAAT	1 cut(s)	576
SmlI	CTYRAG	2 cut(s)	965, 1201
SmoI	CTYRAG	2 cut(s)	965, 1201
SpeI	ACTAGT	1 cut(s)	506
Sse9I	AATT	8 cut(s)	571, 708, 1053, 1215, 1232, 1470, 1534, 1795
SseBI	AGGCCT	1 cut(s)	178
SspI	AATATT	1 cut(s)	580
SspMI	CTAG	8 cut(s)	507, 557, 798, 831, 975, 1658, 1914, 1927
StuI	AGGCCT	1 cut(s)	178
StyD4I	CCNGG	3 cut(s)	263, 943, 1090
SwaI	ATTTAAAT	1 cut(s)	576
TaaI	ACNGT	3 cut(s)	392, 766, 900
TaiI	ACGT	3 cut(s)	763, 1501, 1530
TaqI	TCGA	5 cut(s)	349, 949, 1643, 1708, 1718
TasI	AATT	8 cut(s)	571, 708, 1053, 1215, 1232, 1470, 1534, 1795
TatI	WGTACW	1 cut(s)	1205
TauI	GCSGC	2 cut(s)	1860, 1863
TfiI	GAWTC	2 cut(s)	17, 1244
Tru1I	TTAA	5 cut(s)	575, 1214, 1380, 1626, 1803
Tru9I	TTAA	5 cut(s)	575, 1214, 1380, 1626, 1803
TscAI	CASTG	5 cut(s)	771, 1123, 1365, 1373, 1446
TseFI	GTSAC	2 cut(s)	1409, 1778
TseI	GCWGC	4 cut(s)	123, 251, 692, 1493
Tsp45I	GTSAC	2 cut(s)	1409, 1778
TspDTI	ATGAA	4 cut(s)	837, 1229, 1257, 1394
TspGWI	ACGGA	2 cut(s)	171, 891
TspRI	CASTG	5 cut(s)	771, 1123, 1365, 1373, 1446
VpaK11BI	GGWCC	3 cut(s)	388, 1270, 1910
VspI	ATTAAT	1 cut(s)	1380
XagI	CCTNNNNNAGG	1 cut(s)	1089
XapI	RAATTY	4 cut(s)	571, 1232, 1534, 1795
XceI	RCATGY	1 cut(s)	1084
XmnI	GAANNNNTTC	2 cut(s)	838, 1236
XspI	CTAG	8 cut(s)	507, 557, 798, 831, 975, 1658, 1914, 1927
ZrmI	AGTACT	1 cut(s)	1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.