Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Reverse (-)

1919983 .. 1923708

Gene Structure 3726 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g03520.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGAGCCTGAGGACCATGGCTTGGGCCGAAGCGGTCACCGAGTCGACCCGGAACCAGACTCGCCGCCCTCTCAACTCCTCCTCCTACGTCCCTCCGCATCTCCGCTACTCCGGCGGCCTCGGCGGCGGCGGTTACGCCTCGTACGGCCGAGGGTTCGGTGAGCCGGCTCAGCACGGTGGTTATCGCGGAGGCGGCCGGACCGGTCCGTTTCGCGGAGGAGGTGGAGGTGGTTATCGCGGCGGCGGCCGGATTCGGGGCTGGGCGCCGCCGCCGCCGAGGCCGGCGGTGCATGACGACGTGTGCGAGAAGCTCGAGCAGGTGACAGTGAGTGAGGGCGGTGACGTCAGCAATGCGGGGATCAATTTCGATGCTTACGAGGATATTCCGGTGGAGGCGAGCGGGGAGGACGTGCCGGCGCCGGCGGGGAGTTTCGAGGAGATTGATTTGGGGGAGTGTTTGAATAACAATGTCAAGAGGTGTAGGTACGTGAAGCCGACGCCGGTGCAGCGCCACGCGATTCCGATAGCCTTGGCCGGAAGGGACCTGATGGCGTGTGCTCAGACTGGGTCCGGAAAGACGGCGGCTTTTTGCTTCCCGATCATCAGTGGAGTGTTGAATGTGTCTCAGGGGAGGTCTCAGAGTGATGATGGGTGGACTGTGTATCCGTTTGCGCTGATTTTGTCTCCGACGAGAGAGCTGGCTAGTCAGATATATGAGGAAGCTAAGAAGTTTGCTTATCAGAGTGGGGTGAAGGTGGCTGTTGTTTATGGTGGGGCGCCGATGACTCAGCAGCTTCGTGATCTGGAGAGAGGAGTTGACATCCTAGTTGCTACTCCAGGGCGCTTGGTGGACATGATTGAAAGGTCACGAGTTTCCCTCAAGATGATCAAGTACTTGGCACTAGATGAGGCTGATAGGATGTTGGACATGGGATTTGAACCTCAAATAAGGAAGATTGTTCAACGGATGGACATGCCACCCCCAGGTGCCAGGCAAACATTACTGTTCAGTGCAACATTCCCTGATGAAATACAGAGGCTTGCTGCAGATTTCCTGAAGAACTACATATTTCTGACTGTTGGGAAAGTCGGGTCAAGCACTGATCTTATAGCACAAAAGGTTGAGTTTGTCAGGGATATGGACAAAATTCAGCATTTATGCAGTCTTCTTAAGAATCAGAGGGATAATGGAACTCATGGAAAGCTTGCTTCAACCTTGGTGTTTGTTGAAACCAAGAAAGGAGCAAATCAGTTGGAGAACTGGTTGTCCAGGAATGGATTCCCTGCAATAGCAATACATGGTGACAAAGTGCAAATGGAGAGGGAACGAGCATTGAGATTGTTCAAATGTGGCACAACTCCAATACTGGTGGCGACAGATGTTGCTTCACGAGGTTTAGATATCCCTCATGTTGCCCATGTCATCAATTTTGACTTTCCGAAGAGCATAGATGATTATGTTCACAGAATTGGTCGGACTGGACGTGCTGGTAAATCTGGTCTTGCAACTGCTTTCTTCAGTGAAAAGAACCAGCCACTTGCAAAGTCTTTAGCGGAGTTGATGAAGGAATCAAAGCAGGAGGTTCCTAACTGGCTTCATGATTATGCTAAACAATCATTGCCTTATGGTGGAGACCAGAGCCATAGGTATGGTGGTAGCAGTAACTTTGGTGGATATGACTTCCGTAGGAGTGAGAATCATTATGGTTCAGGTAGTTATGGTTATGGTGATTCTTCTGTGGGTGTGGATATGGCTGCTGCTACTTTTCATGATGCTTCGGGATCATATGCTGCTGATTCATCTGGATATGGAGAAAAATTTGGGAATTCTTATGTAGATGAGCCTGCTGCTTCCTATAATGGTCCTTCTTATAATGGGGGTGAAACAGATGCTGCTGTTACTGCTGGTTTATCGAGCTTTGGAAATTATGAGAATATTGTTGCTGGTGGGTGGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

653

Amino Acids

70.55

Weight (kDa)

6.56

Isoelectric Point (pI)

38.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	166 - 346	2.8e-51	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1872
AarI	CACCTGC	1 cut(s)	307
AatII	GACGTC	1 cut(s)	345
Acc36I	ACCTGC	1 cut(s)	307
AccB1I	GGYRCC	4 cut(s)	262, 415, 775, 986
AccB7I	CCANNNNNTGG	1 cut(s)	21
AccBSI	CCGCTC	1 cut(s)	399
AccI	GTMKAC	1 cut(s)	44
AccII	CGCG	4 cut(s)	186, 213, 237, 515
AccIII	TCCGGA	1 cut(s)	569
AclWI	GGATC	2 cut(s)	365, 1789
AcoI	YGGCCR	4 cut(s)	145, 193, 244, 531
AcsI	RAATTY	3 cut(s)	1146, 1817, 1825
AcuI	CTGAAG	2 cut(s)	1076, 1501
AcyI	GRCGYC	5 cut(s)	263, 342, 416, 497, 776
AfaI	GTAC	3 cut(s)	143, 485, 893
AfiI	CCNNNNNNNGG	5 cut(s)	21, 212, 253, 983, 1628
AflII	CTTAAG	1 cut(s)	1169
AflIII	ACRYGT	1 cut(s)	297
AgeI	ACCGGT	1 cut(s)	200
AgsI	TTSAA	8 cut(s)	460, 616, 860, 938, 962, 1212, 1229, 1345
AjiI	CACGTC	3 cut(s)	298, 409, 1484
AjnI	CCWGG	4 cut(s)	835, 982, 989, 1268
AloI	GAACNNNNNNTCC	2 cut(s)	1250, 1282
AluBI	AGCT	6 cut(s)	310, 697, 722, 793, 1204, 1917
AluI	AGCT	6 cut(s)	310, 697, 722, 793, 1204, 1917
Alw21I	GWGCWC	1 cut(s)	559
Alw26I	GTCTC	4 cut(s)	627, 639, 687, 1626
AlwI	GGATC	2 cut(s)	365, 1789
AlwNI	CAGNNNCTG	1 cut(s)	1892
Ama87I	CYCGRG	1 cut(s)	311
Aor13HI	TCCGGA	1 cut(s)	569
AoxI	GGCC	7 cut(s)	24, 115, 145, 193, 244, 278, 531
ApeKI	GCWGC	8 cut(s)	505, 790, 1043, 1754, 1757, 1790, 1847, 1892
ApoI	RAATTY	3 cut(s)	1146, 1817, 1825
ArsI	GACNNNNNNTTYG	2 cut(s)	917, 949
AsiGI	ACCGGT	1 cut(s)	200
Asp700I	GAANNNNTTC	1 cut(s)	1277
AspLEI	GCGC	6 cut(s)	265, 418, 510, 673, 778, 843
AspS9I	GGNCC	7 cut(s)	12, 24, 198, 203, 541, 567, 1862
AsuC2I	CCSGG	1 cut(s)	49
AsuHPI	GGTGA	8 cut(s)	28, 170, 331, 350, 760, 1313, 1739, 1892
AvaI	CYCGRG	1 cut(s)	311
AvaII	GGWCC	6 cut(s)	12, 198, 203, 541, 567, 1862
AxyI	CCTNAGG	1 cut(s)	8
BanI	GGYRCC	4 cut(s)	262, 415, 775, 986
BauI	CACGAG	2 cut(s)	867, 1389
BbsI	GAAGAC	1 cut(s)	1157
Bbv12I	GWGCWC	1 cut(s)	559
BbvI	GCAGC	8 cut(s)	517, 802, 1030, 1741, 1744, 1777, 1834, 1879
BccI	CCATC	3 cut(s)	541, 641, 961
BceAI	ACGGC	2 cut(s)	160, 594
BcgI	CGANNNNNNTGC	2 cut(s)	484, 518
BciT130I	CCWGG	4 cut(s)	837, 984, 991, 1270
BciVI	GTATCC	1 cut(s)	672
BclI	TGATCA	1 cut(s)	885
BcnI	CCSGG	1 cut(s)	49
BcoDI	GTCTC	4 cut(s)	627, 639, 687, 1626
BfaI	CTAG	3 cut(s)	702, 824, 902
BfmI	CTRYAG	1 cut(s)	1044
BfoI	RGCGCY	5 cut(s)	266, 419, 511, 779, 844
BfrI	CTTAAG	1 cut(s)	1169
BfuAI	ACCTGC	1 cut(s)	307
BfuI	GTATCC	1 cut(s)	672
BglI	GCCNNNNNGGC	2 cut(s)	123, 277
BlpI	GCTNAGC	1 cut(s)	168
BmcAI	AGTACT	1 cut(s)	893
Bme1390I	CCNGG	5 cut(s)	49, 837, 984, 991, 1270
Bme18I	GGWCC	6 cut(s)	12, 198, 203, 541, 567, 1862
BmeT110I	CYCGRG	1 cut(s)	311
BmgBI	CACGTC	3 cut(s)	298, 409, 1484
BmgT120I	GGNCC	7 cut(s)	12, 24, 198, 203, 541, 567, 1862
BmiI	GGNNCC	8 cut(s)	53, 264, 417, 542, 568, 777, 988, 1584
BmrFI	CCNGG	5 cut(s)	49, 837, 984, 991, 1270
BmrI	ACTGGG	1 cut(s)	573
BmsI	GCATC	4 cut(s)	106, 358, 1762, 1879
BmuI	ACTGGG	1 cut(s)	573
BpiI	GAAGAC	1 cut(s)	1157
BplI	GAGNNNNNCTC	2 cut(s)	861, 893
BpmI	CTGGAG	2 cut(s)	819, 824
Bpu1102I	GCTNAGC	1 cut(s)	168
BpuEI	CTTGAG	1 cut(s)	863
BpuMI	CCSGG	1 cut(s)	49
BsaAI	YACGTR	1 cut(s)	487
BsaHI	GRCGYC	5 cut(s)	263, 342, 416, 497, 776
BsaI	GGTCTC	2 cut(s)	639, 1626
BsaJI	CCNNGG	8 cut(s)	15, 118, 148, 275, 528, 836, 982, 1215
BsaWI	WCCGGW	3 cut(s)	200, 385, 569
BsaXI	ACNNNNNCTCC	4 cut(s)	65, 95, 1247, 1277
Bsc4I	CCNNNNNNNGG	5 cut(s)	21, 212, 253, 983, 1628
Bse118I	RCCGGY	6 cut(s)	163, 200, 280, 412, 418, 499
Bse1I	ACTGG	5 cut(s)	568, 1265, 1371, 1483, 1595
Bse21I	CCTNAGG	1 cut(s)	8
Bse3DI	GCAATG	2 cut(s)	355, 1616
BseAI	TCCGGA	1 cut(s)	569
BseBI	CCWGG	4 cut(s)	837, 984, 991, 1270
BseDI	CCNNGG	8 cut(s)	15, 118, 148, 275, 528, 836, 982, 1215
BseGI	GGATG	3 cut(s)	819, 924, 972
BseLI	CCNNNNNNNGG	5 cut(s)	21, 212, 253, 983, 1628
BseMI	GCAATG	2 cut(s)	355, 1616
BseMII	CTCAG	5 cut(s)	182, 572, 638, 650, 800
BseNI	ACTGG	5 cut(s)	568, 1265, 1371, 1483, 1595
BseRI	GAGGAG	5 cut(s)	67, 70, 231, 449, 825
BseX3I	CGGCCG	3 cut(s)	145, 193, 244
BseXI	GCAGC	8 cut(s)	517, 802, 1030, 1741, 1744, 1777, 1834, 1879
BseYI	CCCAGC	1 cut(s)	258
BsgI	GTGCAG	1 cut(s)	524
Bsh1236I	CGCG	4 cut(s)	186, 213, 237, 515
Bsh1285I	CGRYCG	3 cut(s)	148, 196, 247
BshFI	GGCC	7 cut(s)	26, 117, 147, 195, 246, 280, 533
BshNI	GGYRCC	4 cut(s)	262, 415, 775, 986
BshTI	ACCGGT	1 cut(s)	200
BsiEI	CGRYCG	3 cut(s)	148, 196, 247
BsiHKAI	GWGCWC	1 cut(s)	559
BsiHKCI	CYCGRG	1 cut(s)	311
BsiWI	CGTACG	1 cut(s)	141
BslFI	GGGAC	2 cut(s)	74, 554
BslI	CCNNNNNNNGG	5 cut(s)	21, 212, 253, 983, 1628
BsmAI	GTCTC	4 cut(s)	627, 639, 687, 1626
BsmFI	GGGAC	2 cut(s)	74, 554
BsnI	GGCC	7 cut(s)	26, 117, 147, 195, 246, 280, 533
Bso31I	GGTCTC	2 cut(s)	639, 1626
BsoBI	CYCGRG	1 cut(s)	311
Bsp1286I	GDGCHC	1 cut(s)	559
Bsp13I	TCCGGA	1 cut(s)	569
Bsp143I	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
Bsp1720I	GCTNAGC	1 cut(s)	168
Bsp19I	CCATGG	1 cut(s)	15
BspANI	GGCC	7 cut(s)	26, 117, 147, 195, 246, 280, 533
BspCNI	CTCAG	5 cut(s)	181, 571, 637, 649, 799
BspEI	TCCGGA	1 cut(s)	569
BspFNI	CGCG	4 cut(s)	186, 213, 237, 515
BspHI	TCATGA	2 cut(s)	1597, 1768
BspLI	GGNNCC	8 cut(s)	53, 264, 417, 542, 568, 777, 988, 1584
BspMAI	CTGCAG	1 cut(s)	1048
BspMI	ACCTGC	1 cut(s)	307
BspPI	GGATC	2 cut(s)	365, 1789
BspQI	GCTCTTC	1 cut(s)	1436
BspT107I	GGYRCC	4 cut(s)	262, 415, 775, 986
BspTI	CTTAAG	1 cut(s)	1169
BspTNI	GGTCTC	2 cut(s)	639, 1626
BsrBI	CCGCTC	1 cut(s)	399
BsrDI	GCAATG	2 cut(s)	355, 1616
BsrFI	RCCGGY	6 cut(s)	163, 200, 280, 412, 418, 499
BsrI	ACTGG	5 cut(s)	568, 1265, 1371, 1483, 1595
BssAI	RCCGGY	6 cut(s)	163, 200, 280, 412, 418, 499
BssECI	CCNNGG	8 cut(s)	15, 118, 148, 275, 528, 836, 982, 1215
BssMI	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
BssNI	GRCGYC	5 cut(s)	263, 342, 416, 497, 776
BssSI	CACGAG	2 cut(s)	867, 1389
BssT1I	CCWWGG	3 cut(s)	15, 528, 1215
Bst2BI	CACGAG	2 cut(s)	867, 1389
Bst2UI	CCWGG	4 cut(s)	837, 984, 991, 1270
Bst4CI	ACNGT	5 cut(s)	176, 325, 658, 1005, 1078
Bst6I	CTCTTC	1 cut(s)	1436
BstACI	GRCGYC	5 cut(s)	263, 342, 416, 497, 776
BstAFI	CTTAAG	1 cut(s)	1169
BstBAI	YACGTR	1 cut(s)	487
BstC8I	GCNNGC	9 cut(s)	165, 282, 397, 414, 420, 699, 1041, 1206, 1845
BstDEI	CTNAG	7 cut(s)	8, 168, 558, 624, 636, 723, 786
BstDSI	CCRYGG	1 cut(s)	15
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	3 cut(s)	819, 924, 972
BstFNI	CGCG	4 cut(s)	186, 213, 237, 515
BstH2I	RGCGCY	5 cut(s)	266, 419, 511, 779, 844
BstHHI	GCGC	6 cut(s)	265, 418, 510, 673, 778, 843
BstKTI	GATC	6 cut(s)	360, 600, 802, 888, 1105, 1784
BstMAI	GTCTC	4 cut(s)	627, 639, 687, 1626
BstMBI	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
BstMCI	CGRYCG	3 cut(s)	148, 196, 247
BstNI	CCWGG	4 cut(s)	837, 984, 991, 1270
BstNSI	RCATGY	1 cut(s)	976
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	5 cut(s)	47, 835, 982, 989, 1268
BstSFI	CTRYAG	1 cut(s)	1044
BstUI	CGCG	4 cut(s)	186, 213, 237, 515
BstV1I	GCAGC	8 cut(s)	517, 802, 1030, 1741, 1744, 1777, 1834, 1879
BstV2I	GAAGAC	1 cut(s)	1157
BstXI	CCANNNNNNTGG	1 cut(s)	1649
BstZI	CGGCCG	3 cut(s)	145, 193, 244
Bsu36I	CCTNAGG	1 cut(s)	8
BsuI	GTATCC	1 cut(s)	672
BsuRI	GGCC	7 cut(s)	26, 117, 147, 195, 246, 280, 533
BtgI	CCRYGG	1 cut(s)	15
BtrI	CACGTC	3 cut(s)	298, 409, 1484
BtsCI	GGATG	3 cut(s)	819, 924, 972
BtsIMutI	CAGTG	5 cut(s)	330, 610, 1015, 1098, 1525
BveI	ACCTGC	1 cut(s)	307
Cac8I	GCNNGC	9 cut(s)	165, 282, 397, 414, 420, 699, 1041, 1206, 1845
CaiI	CAGNNNCTG	1 cut(s)	1892
CciI	TCATGA	2 cut(s)	1597, 1768
CfoI	GCGC	6 cut(s)	265, 418, 510, 673, 778, 843
Cfr10I	RCCGGY	6 cut(s)	163, 200, 280, 412, 418, 499
Cfr13I	GGNCC	7 cut(s)	12, 24, 198, 203, 541, 567, 1862
CpoI	CGGWCCG	2 cut(s)	198, 203
CseI	GACGC	1 cut(s)	505
Csp6I	GTAC	3 cut(s)	142, 484, 892
CspAI	ACCGGT	1 cut(s)	200
CspCI	CAANNNNNGTGG	2 cut(s)	1350, 1385
CspI	CGGWCCG	2 cut(s)	198, 203
CviQI	GTAC	3 cut(s)	142, 484, 892
DdeI	CTNAG	7 cut(s)	8, 168, 558, 624, 636, 723, 786
DinI	GGCGCC	3 cut(s)	264, 417, 777
DpnI	GATC	6 cut(s)	359, 599, 801, 887, 1104, 1783
DpnII	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
EaeI	YGGCCR	4 cut(s)	145, 193, 244, 531
EagI	CGGCCG	3 cut(s)	145, 193, 244
Eam1104I	CTCTTC	1 cut(s)	1436
EarI	CTCTTC	1 cut(s)	1436
EclXI	CGGCCG	3 cut(s)	145, 193, 244
Eco130I	CCWWGG	3 cut(s)	15, 528, 1215
Eco31I	GGTCTC	2 cut(s)	639, 1626
Eco32I	GATATC	1 cut(s)	1402
Eco47I	GGWCC	6 cut(s)	12, 198, 203, 541, 567, 1862
Eco52I	CGGCCG	3 cut(s)	145, 193, 244
Eco57I	CTGAAG	2 cut(s)	1076, 1501
Eco81I	CCTNAGG	1 cut(s)	8
Eco88I	CYCGRG	1 cut(s)	311
Eco91I	GGTNACC	1 cut(s)	34
EcoO109I	RGGNCCY	1 cut(s)	541
EcoO65I	GGTNACC	1 cut(s)	34
EcoRI	GAATTC	1 cut(s)	1825
EcoRII	CCWGG	4 cut(s)	835, 982, 989, 1268
EcoRV	GATATC	1 cut(s)	1402
EcoT14I	CCWWGG	3 cut(s)	15, 528, 1215
EgeI	GGCGCC	3 cut(s)	264, 417, 777
EheI	GGCGCC	3 cut(s)	264, 417, 777
ErhI	CCWWGG	3 cut(s)	15, 528, 1215
FaqI	GGGAC	2 cut(s)	74, 554
FauI	CCCGC	3 cut(s)	346, 392, 415
FauNDI	CATATG	1 cut(s)	1786
FbaI	TGATCA	1 cut(s)	885
FblI	GTMKAC	1 cut(s)	44
FokI	GGATG	3 cut(s)	806, 931, 979
FspBI	CTAG	3 cut(s)	702, 824, 902
GlaI	GCGC	6 cut(s)	264, 417, 509, 672, 777, 842
GsaI	CCCAGC	1 cut(s)	262
GsuI	CTGGAG	2 cut(s)	819, 824
HaeII	RGCGCY	5 cut(s)	266, 419, 511, 779, 844
HaeIII	GGCC	7 cut(s)	26, 117, 147, 195, 246, 280, 533
HgaI	GACGC	1 cut(s)	505
HhaI	GCGC	6 cut(s)	265, 418, 510, 673, 778, 843
Hin1I	GRCGYC	5 cut(s)	263, 342, 416, 497, 776
Hin6I	GCGC	6 cut(s)	263, 416, 508, 671, 776, 841
HinP1I	GCGC	6 cut(s)	263, 416, 508, 671, 776, 841
HincII	GTYRAC	2 cut(s)	45, 817
HindII	GTYRAC	2 cut(s)	45, 817
HindIII	AAGCTT	1 cut(s)	1202
HphI	GGTGA	8 cut(s)	28, 170, 331, 350, 760, 1313, 1739, 1892
Hpy166II	GTNNAC	5 cut(s)	45, 654, 817, 850, 1462
Hpy8I	GTNNAC	5 cut(s)	45, 654, 817, 850, 1462
Hpy99I	CGWCG	3 cut(s)	299, 499, 691
HpyAV	CCTTC	4 cut(s)	531, 745, 1558, 1875
HpyCH4III	ACNGT	5 cut(s)	176, 325, 658, 1005, 1078
HpyCH4IV	ACGT	6 cut(s)	87, 297, 342, 408, 486, 1483
HpyCH4V	TGCA	9 cut(s)	289, 505, 1013, 1046, 1161, 1286, 1312, 1505, 1541
HpyF3I	CTNAG	7 cut(s)	8, 168, 558, 624, 636, 723, 786
HpySE526I	ACGT	6 cut(s)	87, 297, 342, 408, 486, 1483
Hsp92I	GRCGYC	5 cut(s)	263, 342, 416, 497, 776
HspAI	GCGC	6 cut(s)	263, 416, 508, 671, 776, 841
KasI	GGCGCC	3 cut(s)	262, 415, 775
Kpn2I	TCCGGA	1 cut(s)	569
KroI	GCCGGC	4 cut(s)	163, 280, 412, 418
KroNI	GCCGGC	4 cut(s)	165, 282, 414, 420
Ksp22I	TGATCA	1 cut(s)	885
Kzo9I	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
LguI	GCTCTTC	1 cut(s)	1436
LmnI	GCTCC	1 cut(s)	1241
Lsp1109I	GCAGC	8 cut(s)	517, 802, 1030, 1741, 1744, 1777, 1834, 1879
LweI	GCATC	4 cut(s)	106, 358, 1762, 1879
MaeI	CTAG	3 cut(s)	702, 824, 902
MaeII	ACGT	6 cut(s)	87, 297, 342, 408, 486, 1483
MaeIII	GTNAC	8 cut(s)	34, 131, 319, 338, 864, 1301, 1661, 1897
MalI	GATC	6 cut(s)	359, 599, 801, 887, 1104, 1783
MbiI	CCGCTC	1 cut(s)	399
MboI	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
MboII	GAAGA	6 cut(s)	964, 1069, 1157, 1453, 1507, 1725
MhlI	GDGCHC	1 cut(s)	559
MluCI	AATT	7 cut(s)	361, 1146, 1426, 1467, 1817, 1825, 1924
Mly113I	GGCGCC	3 cut(s)	263, 416, 776
MlyI	GAGTC	3 cut(s)	50, 52, 778
MmeI	TCCRAC	4 cut(s)	710, 903, 1233, 1454
MreI	CGCCGGCG	1 cut(s)	418
MroI	TCCGGA	1 cut(s)	569
MroNI	GCCGGC	4 cut(s)	163, 280, 412, 418
MroXI	GAANNNNTTC	1 cut(s)	1277
MseI	TTAA	1 cut(s)	1170
MslI	CAYNNNNRTG	2 cut(s)	1602, 1647
MspCI	CTTAAG	1 cut(s)	1169
MspR9I	CCNGG	5 cut(s)	49, 837, 984, 991, 1270
MvaI	CCWGG	4 cut(s)	837, 984, 991, 1270
MvnI	CGCG	4 cut(s)	186, 213, 237, 515
NaeI	GCCGGC	4 cut(s)	165, 282, 414, 420
NarI	GGCGCC	3 cut(s)	263, 416, 776
NciI	CCSGG	1 cut(s)	49
NcoI	CCATGG	1 cut(s)	15
NdeI	CATATG	1 cut(s)	1786
NdeII	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
NgoMIV	GCCGGC	4 cut(s)	163, 280, 412, 418
NlaIV	GGNNCC	8 cut(s)	53, 264, 417, 542, 568, 777, 988, 1584
NmeAIII	GCCGAG	3 cut(s)	99, 173, 300
NmuCI	GTSAC	5 cut(s)	34, 319, 338, 864, 1301
NspI	RCATGY	1 cut(s)	976
PaeR7I	CTCGAG	1 cut(s)	311
PagI	TCATGA	2 cut(s)	1597, 1768
PaqCI	CACCTGC	1 cut(s)	307
PciSI	GCTCTTC	1 cut(s)	1436
PcsI	WCGNNNNNNNCGW	3 cut(s)	300, 372, 1480
PdiI	GCCGGC	4 cut(s)	165, 282, 414, 420
PdmI	GAANNNNTTC	1 cut(s)	1277
PfeI	GAWTC	8 cut(s)	250, 517, 1174, 1278, 1568, 1696, 1730, 1796
Pfl23II	CGTACG	1 cut(s)	141
PflFI	GACNNNGTC	1 cut(s)	565
PflMI	CCANNNNNTGG	1 cut(s)	21
PfoI	TCCNGGA	1 cut(s)	1268
PinAI	ACCGGT	1 cut(s)	200
PleI	GAGTC	3 cut(s)	49, 52, 778
PluTI	GGCGCC	3 cut(s)	266, 419, 779
PpsI	GAGTC	3 cut(s)	49, 52, 778
Ppu21I	YACGTR	1 cut(s)	487
PpuMI	RGGWCCY	1 cut(s)	541
PsiI	TTATAA	1 cut(s)	1872
Psp5II	RGGWCCY	1 cut(s)	541
Psp6I	CCWGG	4 cut(s)	835, 982, 989, 1268
PspEI	GGTNACC	1 cut(s)	34
PspFI	CCCAGC	1 cut(s)	258
PspGI	CCWGG	4 cut(s)	835, 982, 989, 1268
PspLI	CGTACG	1 cut(s)	141
PspN4I	GGNNCC	8 cut(s)	53, 264, 417, 542, 568, 777, 988, 1584
PspPI	GGNCC	7 cut(s)	12, 24, 198, 203, 541, 567, 1862
PspPPI	RGGWCCY	1 cut(s)	541
PspXI	VCTCGAGB	1 cut(s)	311
PstI	CTGCAG	1 cut(s)	1048
PstNI	CAGNNNCTG	1 cut(s)	1892
PsyI	GACNNNGTC	1 cut(s)	565
RsaI	GTAC	3 cut(s)	143, 485, 893
RsaNI	GTAC	3 cut(s)	142, 484, 892
RseI	CAYNNNNRTG	2 cut(s)	1602, 1647
Rsr2I	CGGWCCG	2 cut(s)	198, 203
RsrII	CGGWCCG	2 cut(s)	198, 203
SalI	GTCGAC	1 cut(s)	43
SapI	GCTCTTC	1 cut(s)	1436
SaqAI	TTAA	1 cut(s)	1170
Sau3AI	GATC	6 cut(s)	357, 597, 799, 885, 1102, 1781
Sau96I	GGNCC	7 cut(s)	12, 24, 198, 203, 541, 567, 1862
ScaI	AGTACT	1 cut(s)	893
SchI	GAGTC	3 cut(s)	50, 52, 778
ScrFI	CCNGG	5 cut(s)	49, 837, 984, 991, 1270
SduI	GDGCHC	1 cut(s)	559
SfaNI	GCATC	4 cut(s)	106, 358, 1762, 1879
SfcI	CTRYAG	1 cut(s)	1044
SfoI	GGCGCC	3 cut(s)	264, 417, 777
Sfr274I	CTCGAG	1 cut(s)	311
SgrAI	CRCCGGYG	2 cut(s)	418, 499
SinI	GGWCC	6 cut(s)	12, 198, 203, 541, 567, 1862
SlaI	CTCGAG	1 cut(s)	311
SmiMI	CAYNNNNRTG	2 cut(s)	1602, 1647
SmlI	CTYRAG	3 cut(s)	311, 878, 1169
SmoI	CTYRAG	3 cut(s)	311, 878, 1169
Sse9I	AATT	7 cut(s)	361, 1146, 1426, 1467, 1817, 1825, 1924
SspDI	GGCGCC	3 cut(s)	262, 415, 775
SspI	AATATT	1 cut(s)	1936
SspMI	CTAG	3 cut(s)	702, 824, 902
StyD4I	CCNGG	5 cut(s)	47, 835, 982, 989, 1268
StyI	CCWWGG	3 cut(s)	15, 528, 1215
TaaI	ACNGT	5 cut(s)	176, 325, 658, 1005, 1078
TaiI	ACGT	6 cut(s)	90, 300, 345, 411, 489, 1486
TaqI	TCGA	5 cut(s)	44, 312, 366, 432, 1913
TasI	AATT	7 cut(s)	361, 1146, 1426, 1467, 1817, 1825, 1924
TatI	WGTACW	1 cut(s)	891
TfiI	GAWTC	8 cut(s)	250, 517, 1174, 1278, 1568, 1696, 1730, 1796
Tru1I	TTAA	1 cut(s)	1170
Tru9I	TTAA	1 cut(s)	1170
TscAI	CASTG	5 cut(s)	330, 610, 1015, 1105, 1525
TseFI	GTSAC	5 cut(s)	34, 319, 338, 864, 1301
TseI	GCWGC	8 cut(s)	505, 790, 1043, 1754, 1757, 1790, 1847, 1892
Tsp45I	GTSAC	5 cut(s)	34, 319, 338, 864, 1301
TspDTI	ATGAA	5 cut(s)	1041, 1577, 1586, 1757, 1788
TspGWI	ACGGA	4 cut(s)	195, 654, 979, 1673
TspRI	CASTG	5 cut(s)	330, 610, 1015, 1105, 1525
Tth111I	GACNNNGTC	1 cut(s)	565
Van91I	CCANNNNNTGG	1 cut(s)	21
Vha464I	CTTAAG	1 cut(s)	1169
VpaK11BI	GGWCC	6 cut(s)	12, 198, 203, 541, 567, 1862
XapI	RAATTY	3 cut(s)	1146, 1817, 1825
XceI	RCATGY	1 cut(s)	976
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1649
XhoI	CTCGAG	1 cut(s)	311
XmiI	GTMKAC	1 cut(s)	44
XmnI	GAANNNNTTC	1 cut(s)	1277
XspI	CTAG	3 cut(s)	702, 824, 902
ZraI	GACGTC	1 cut(s)	343
ZrmI	AGTACT	1 cut(s)	893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.