Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Reverse (-)

11987409 .. 11992415

Gene Structure 5007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G084600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGAGAACTTCATGGGCAGATTCTGTTGCTAATTCTCAAGTAGAGAATCCAACCACTGGTGCATCTGATAATAACAGCTCATTTCGCCCTGCACGGTCAACTTATGTCCCGCCACATCTTCGTAATAGGCCACCGTCTTCTGAACCCCCGGCTCCTTCACAGTCTGCCCCACCTCCAGCTAATGACCGTGTAGGTAACAGTGGGCCTGCAGCTGGGCCCGCCTGGGGTGCTGGTAGTTCTAGACATGATGCTGGGCGCCCAGGATATGTTTCCAGTGGTGGTCGAAATGGTGGTGGTTGGAACAATAGAAGCGGAGGGTGGGACCGTGGGAGGGATCGTGAGGTAAACCCTTTTGCTGATGAAGACATCACAGAACCAGCATTTAGTGATCAAGAAAACACTGTCATTAACTTTGATGCTTATGAGGATATCCCGGTTGAAACTAGTGGGGATAATGTGCCACCACCTGTGAATACTTTCGCAGAGATAGACTTAGGGGAGGCTTTGAATTTAAATATTCGGAGGTGCAAGTATGTGAAGCCGACTCCTGTTCAGCGTCATGCAATACCTATTTCTCTTGGAGGGCGGGATTTGATGGCTTGTGCTCAGACGGGTTCAGGGAAGACAGCTGCTTTCTGCTTTCCGATTATTAGTGGAATCATGCAGGGGCAGTATGTTCAGAGACCTCGTGGAGCACGTACTGTGTACCCTCTTGCTCTTATTCTCTCCCCTACTAGAGAACTCTCTTGCCAGATACATGAAGAAACTAGAAAATTTTCTTATCAAACTGGTGTCAAGGTGGTAGTTGCTTATGGAGGAGCACCAATAAACCAACAGTTGAGAGAGCTTGAGAGGGGGGTGGATATTCTTGTGGCAACTCCGGGACGATTGGTAGATCTGCTTGAGAGGGCAAGAGTGTCGTTGCAGATGATAAGATATTTAGCTCTTGATGAGGCAGATCGGATGCTGGACATGGGTTTTGAGCCTCAAATTAGGAAGATAGTGGAACAGATGGACATGCCTCCACCAGGTTTGAGACAGACCATGCTATTTAGTGCTACCTTTCCAAAGGAGATACAGCGACTGGCATCAGATTTTCTTTCAAATTATATATTTTTGGCTGTTGGAAGGGTTGGTTCAAGTACTGATTTAATTGTTCAAAGAGTTGAGTTCGTTCACGAGTCTGATAAAAGAAGTCATCTCATGGATCTCCTTCATGCACAGAGGGAAAATGGAGTTCATGGCAAGCAATCCCTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCCGATGCATTGGAACACTGGTTGTGTATGAATGGGTTTCCGGCAACTACTATTCATGGTGACAGAACACAACAGGAAAGAGAACAGGCACTGAGATCATTCAAGAGTGGAAATACACCAATTTTAGTGGCAACAGATGTGGCAGCACGTGGTCTTGATATCCCCCATGTAGCTCATGTGGTAAATTTTGATCTCCCAAATGACATTGATGATTATGTTCACCGGATAGGTAGGACAGGGCGAGCGGGCAAATCCGGATTGGCAACAGCATTCTTTAACGAGAATAATTTATCAATGGCGAAACCACTTGCTGATCTAATGCAAGAGGCAAATCAGGAAGTACCTGCTTGGCTTACTCGTTATGCATCAAGAGTTTCTTATGGTGGCGGCGGTAGGAATCGGCGATCTGGGGGAGGTCGTTTTGGTGGCCGTGATTTTAGAAGGGAGAGTTCCTTCACTAGGGGTGCAGATTTCTACGGTGGGGGAAACAGTAGTGGGGGATATGGGGTTCCCGGTGGCTATGGTGGGGCCCCTGGGGGTTATGGCCCGAGTAACGGTATGACCAGTGCTTGGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

622

Amino Acids

67.47

Weight (kDa)

7.23

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1639
AccB1I	GGYRCC	1 cut(s)	255
AccB7I	CCANNNNNTGG	2 cut(s)	56, 1857
AccBSI	CCGCTC	1 cut(s)	1532
AccIII	TCCGGA	1 cut(s)	1541
AciI	CCGC	7 cut(s)	110, 219, 312, 586, 1532, 1674, 1677
AclWI	GGATC	2 cut(s)	342, 1215
AcoI	YGGCCR	1 cut(s)	1714
AcsI	RAATTY	3 cut(s)	508, 773, 1471
AcvI	CACGTG	1 cut(s)	1436
AcyI	GRCGYC	1 cut(s)	256
AfaI	GTAC	4 cut(s)	700, 707, 1144, 1629
AfiI	CCNNNNNNNGG	8 cut(s)	56, 212, 224, 331, 1028, 1746, 1841, 1857
AgsI	TTSAA	6 cut(s)	440, 508, 1104, 1140, 1160, 1390
AhlI	ACTAGT	1 cut(s)	443
AjnI	CCWGG	4 cut(s)	221, 259, 1027, 1819
AloI	GAACNNNNNNTCC	2 cut(s)	1779, 1811
AluBI	AGCT	7 cut(s)	78, 179, 212, 629, 847, 944, 1460
AluI	AGCT	7 cut(s)	78, 179, 212, 629, 847, 944, 1460
Alw21I	GWGCWC	3 cut(s)	607, 697, 823
Alw26I	GTCTC	3 cut(s)	676, 1030, 1268
AlwI	GGATC	2 cut(s)	342, 1215
AlwNI	CAGNNNCTG	3 cut(s)	23, 1084, 1378
Ama87I	CYCGRG	1 cut(s)	1834
Aor13HI	TCCGGA	1 cut(s)	1541
AoxI	GGCC	6 cut(s)	128, 203, 215, 1714, 1815, 1831
ApaI	GGGCCC	2 cut(s)	219, 1819
ApeKI	GCWGC	3 cut(s)	209, 629, 1430
ApoI	RAATTY	3 cut(s)	508, 773, 1471
ArsI	GACNNNNNNTTYG	2 cut(s)	962, 994
Asp700I	GAANNNNTTC	2 cut(s)	476, 775
AspLEI	GCGC	1 cut(s)	258
AspS9I	GGNCC	7 cut(s)	203, 215, 216, 322, 1815, 1816, 1832
AsuC2I	CCSGG	4 cut(s)	149, 434, 882, 1800
AsuHPI	GGTGA	2 cut(s)	1358, 1499
AvaI	CYCGRG	1 cut(s)	1834
AvaII	GGWCC	1 cut(s)	322
BaeGI	GKGCMC	2 cut(s)	219, 1819
BanI	GGYRCC	1 cut(s)	255
BanII	GRGCYC	2 cut(s)	219, 1819
BauI	CACGAG	2 cut(s)	687, 1178
BbrPI	CACGTG	1 cut(s)	1436
BbsI	GAAGAC	3 cut(s)	129, 369, 629
Bbv12I	GWGCWC	3 cut(s)	607, 697, 823
BbvI	GCAGC	3 cut(s)	221, 616, 1442
BccI	CCATC	2 cut(s)	589, 1006
BceAI	ACGGC	1 cut(s)	1701
BcgI	CGANNNNNNTGC	2 cut(s)	900, 934
BciT130I	CCWGG	4 cut(s)	223, 261, 1029, 1821
BclI	TGATCA	1 cut(s)	388
BcnI	CCSGG	4 cut(s)	149, 434, 882, 1800
BcoDI	GTCTC	3 cut(s)	676, 1030, 1268
BcuI	ACTAGT	1 cut(s)	443
BfaI	CTAG	5 cut(s)	240, 444, 735, 768, 1746
BfmI	CTRYAG	1 cut(s)	207
BfoI	RGCGCY	1 cut(s)	259
BfuAI	ACCTGC	1 cut(s)	1639
BglII	AGATCT	1 cut(s)	895
BisI	GCNGC	4 cut(s)	210, 630, 1431, 1675
BlsI	GCNGC	4 cut(s)	211, 631, 1432, 1676
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	8 cut(s)	149, 223, 261, 434, 882, 1029, 1800, 1821
Bme18I	GGWCC	1 cut(s)	322
BmeT110I	CYCGRG	1 cut(s)	1834
BmgT120I	GGNCC	7 cut(s)	203, 215, 216, 322, 1815, 1816, 1832
BmiI	GGNNCC	9 cut(s)	153, 217, 257, 323, 1288, 1797, 1816, 1817, 1818
BmrFI	CCNGG	8 cut(s)	149, 223, 261, 434, 882, 1029, 1800, 1821
BmsI	GCATC	7 cut(s)	71, 238, 406, 954, 1097, 1282, 1661
BpiI	GAAGAC	3 cut(s)	129, 369, 629
BpmI	CTGGAG	1 cut(s)	159
BpuEI	CTTGAG	3 cut(s)	21, 869, 923
BpuMI	CCSGG	4 cut(s)	149, 434, 882, 1800
BsaAI	YACGTR	2 cut(s)	698, 1436
BsaHI	GRCGYC	1 cut(s)	256
BsaI	GGTCTC	1 cut(s)	676
BsaJI	CCNNGG	6 cut(s)	147, 222, 259, 325, 1819, 1820
BsaWI	WCCGGW	2 cut(s)	1509, 1541
BsaXI	ACNNNNNCTCC	2 cut(s)	322, 352
Bsc4I	CCNNNNNNNGG	8 cut(s)	56, 212, 224, 331, 1028, 1746, 1841, 1857
Bse1I	ACTGG	6 cut(s)	61, 273, 793, 1089, 1310, 1851
BseAI	TCCGGA	1 cut(s)	1541
BseBI	CCWGG	4 cut(s)	223, 261, 1029, 1821
BseDI	CCNNGG	6 cut(s)	147, 222, 259, 325, 1819, 1820
BseGI	GGATG	1 cut(s)	969
BseLI	CCNNNNNNNGG	8 cut(s)	56, 212, 224, 331, 1028, 1746, 1841, 1857
BseMII	CTCAG	2 cut(s)	620, 1370
BseNI	ACTGG	6 cut(s)	61, 273, 793, 1089, 1310, 1851
BseRI	GAGGAG	1 cut(s)	831
BseSI	GKGCMC	2 cut(s)	219, 1819
BseXI	GCAGC	3 cut(s)	221, 616, 1442
BseYI	CCCAGC	2 cut(s)	212, 251
BsgI	GTGCAG	2 cut(s)	75, 1773
BshFI	GGCC	6 cut(s)	130, 205, 217, 1716, 1817, 1833
BshNI	GGYRCC	1 cut(s)	255
BsiHKAI	GWGCWC	3 cut(s)	607, 697, 823
BsiHKCI	CYCGRG	1 cut(s)	1834
BsiSI	CCGG	7 cut(s)	149, 434, 881, 1328, 1510, 1542, 1800
BslFI	GGGAC	3 cut(s)	92, 335, 897
BslI	CCNNNNNNNGG	8 cut(s)	56, 212, 224, 331, 1028, 1746, 1841, 1857
BsmAI	GTCTC	3 cut(s)	676, 1030, 1268
BsmFI	GGGAC	3 cut(s)	92, 335, 897
BsmI	GAATGC	1 cut(s)	1556
BsnI	GGCC	6 cut(s)	130, 205, 217, 1716, 1817, 1833
Bso31I	GGTCTC	1 cut(s)	676
BsoBI	CYCGRG	1 cut(s)	1834
Bsp120I	GGGCCC	2 cut(s)	215, 1815
Bsp1286I	GDGCHC	5 cut(s)	219, 607, 697, 823, 1819
Bsp13I	TCCGGA	1 cut(s)	1541
Bsp143I	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
BspACI	CCGC	7 cut(s)	110, 219, 312, 586, 1532, 1674, 1677
BspANI	GGCC	6 cut(s)	130, 205, 217, 1716, 1817, 1833
BspCNI	CTCAG	2 cut(s)	619, 1371
BspEI	TCCGGA	1 cut(s)	1541
BspLI	GGNNCC	9 cut(s)	153, 217, 257, 323, 1288, 1797, 1816, 1817, 1818
BspMAI	CTGCAG	1 cut(s)	211
BspMI	ACCTGC	1 cut(s)	1639
BspPI	GGATC	2 cut(s)	342, 1215
BspT107I	GGYRCC	1 cut(s)	255
BspTNI	GGTCTC	1 cut(s)	676
BsrBI	CCGCTC	1 cut(s)	1532
BsrI	ACTGG	6 cut(s)	61, 273, 793, 1089, 1310, 1851
BssECI	CCNNGG	6 cut(s)	147, 222, 259, 325, 1819, 1820
BssMI	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
BssNI	GRCGYC	1 cut(s)	256
BssSI	CACGAG	2 cut(s)	687, 1178
Bst2BI	CACGAG	2 cut(s)	687, 1178
Bst2UI	CCWGG	4 cut(s)	223, 261, 1029, 1821
BstACI	GRCGYC	1 cut(s)	256
BstBAI	YACGTR	2 cut(s)	698, 1436
BstC8I	GCNNGC	5 cut(s)	207, 219, 1247, 1530, 1534
BstDEI	CTNAG	3 cut(s)	493, 606, 1379
BstDSI	CCRYGG	1 cut(s)	325
BstENI	CCTNNNNNAGG	2 cut(s)	1026, 1744
BstF5I	GGATG	1 cut(s)	969
BstH2I	RGCGCY	1 cut(s)	259
BstHHI	GCGC	1 cut(s)	258
BstKTI	GATC	9 cut(s)	337, 391, 898, 961, 1210, 1385, 1480, 1603, 1694
BstMAI	GTCTC	3 cut(s)	676, 1030, 1268
BstMBI	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
BstMWI	GCNNNNNNNGC	3 cut(s)	84, 218, 227
BstNI	CCWGG	4 cut(s)	223, 261, 1029, 1821
BstNSI	RCATGY	1 cut(s)	1021
BstSCI	CCNGG	8 cut(s)	147, 221, 259, 432, 880, 1027, 1798, 1819
BstSFI	CTRYAG	1 cut(s)	207
BstSLI	GKGCMC	2 cut(s)	219, 1819
BstV1I	GCAGC	3 cut(s)	221, 616, 1442
BstV2I	GAAGAC	3 cut(s)	129, 369, 629
BstX2I	RGATCY	2 cut(s)	895, 1207
BstYI	RGATCY	2 cut(s)	895, 1207
BsuRI	GGCC	6 cut(s)	130, 205, 217, 1716, 1817, 1833
BtgI	CCRYGG	1 cut(s)	325
BtsCI	GGATG	1 cut(s)	969
BtsIMutI	CAGTG	7 cut(s)	54, 205, 280, 399, 1303, 1376, 1858
BveI	ACCTGC	1 cut(s)	1639
Cac8I	GCNNGC	5 cut(s)	207, 219, 1247, 1530, 1534
CaiI	CAGNNNCTG	3 cut(s)	23, 1084, 1378
CfoI	GCGC	1 cut(s)	258
Cfr13I	GGNCC	7 cut(s)	203, 215, 216, 322, 1815, 1816, 1832
CseI	GACGC	1 cut(s)	545
CsiI	ACCWGGT	1 cut(s)	1027
Csp6I	GTAC	4 cut(s)	699, 706, 1143, 1628
CspCI	CAANNNNNGTGG	6 cut(s)	1014, 1049, 1395, 1407, 1430, 1442
CviQI	GTAC	4 cut(s)	699, 706, 1143, 1628
DdeI	CTNAG	3 cut(s)	493, 606, 1379
DinI	GGCGCC	1 cut(s)	257
DpnI	GATC	9 cut(s)	336, 390, 897, 960, 1209, 1384, 1479, 1602, 1693
DpnII	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
DraI	TTTAAA	1 cut(s)	513
EaeI	YGGCCR	1 cut(s)	1714
Eco24I	GRGCYC	2 cut(s)	219, 1819
Eco31I	GGTCTC	1 cut(s)	676
Eco32I	GATATC	2 cut(s)	430, 1447
Eco47I	GGWCC	1 cut(s)	322
Eco72I	CACGTG	1 cut(s)	1436
Eco88I	CYCGRG	1 cut(s)	1834
EcoNI	CCTNNNNNAGG	2 cut(s)	1026, 1744
EcoO109I	RGGNCCY	2 cut(s)	1815, 1816
EcoRII	CCWGG	4 cut(s)	221, 259, 1027, 1819
EcoRV	GATATC	2 cut(s)	430, 1447
EcoT22I	ATGCAT	2 cut(s)	1297, 1654
EcoT38I	GRGCYC	2 cut(s)	219, 1819
EgeI	GGCGCC	1 cut(s)	257
EheI	GGCGCC	1 cut(s)	257
FalI	AAGNNNNNCTT	2 cut(s)	1648, 1680
FaqI	GGGAC	3 cut(s)	92, 335, 897
FauI	CCCGC	4 cut(s)	117, 226, 579, 1525
FbaI	TGATCA	1 cut(s)	388
Fnu4HI	GCNGC	4 cut(s)	210, 630, 1431, 1675
FokI	GGATG	1 cut(s)	976
FriOI	GRGCYC	2 cut(s)	219, 1819
Fsp4HI	GCNGC	4 cut(s)	210, 630, 1431, 1675
FspBI	CTAG	5 cut(s)	240, 444, 735, 768, 1746
GlaI	GCGC	1 cut(s)	257
GluI	GCNGC	4 cut(s)	210, 630, 1431, 1675
GsaI	CCCAGC	2 cut(s)	216, 255
GsuI	CTGGAG	1 cut(s)	159
HaeII	RGCGCY	1 cut(s)	259
HaeIII	GGCC	6 cut(s)	130, 205, 217, 1716, 1817, 1833
HapII	CCGG	7 cut(s)	149, 434, 881, 1328, 1510, 1542, 1800
HgaI	GACGC	1 cut(s)	545
HhaI	GCGC	1 cut(s)	258
Hin1I	GRCGYC	1 cut(s)	256
Hin6I	GCGC	1 cut(s)	256
HinP1I	GCGC	1 cut(s)	256
HincII	GTYRAC	1 cut(s)	99
HindII	GTYRAC	1 cut(s)	99
HinfI	GANTC	6 cut(s)	20, 46, 544, 657, 1181, 1684
HpaII	CCGG	7 cut(s)	149, 434, 881, 1328, 1510, 1542, 1800
HphI	GGTGA	2 cut(s)	1358, 1499
Hpy166II	GTNNAC	5 cut(s)	99, 346, 706, 1177, 1507
Hpy188I	TCNGA	9 cut(s)	67, 142, 522, 609, 645, 681, 963, 1093, 1186
Hpy8I	GTNNAC	5 cut(s)	99, 346, 706, 1177, 1507
HpyAV	CCTTC	6 cut(s)	165, 1122, 1223, 1276, 1722, 1750
HpyCH4IV	ACGT	2 cut(s)	697, 1435
HpyF10VI	GCNNNNNNNGC	3 cut(s)	84, 218, 227
HpyF3I	CTNAG	3 cut(s)	493, 606, 1379
HpySE526I	ACGT	2 cut(s)	697, 1435
Hsp92I	GRCGYC	1 cut(s)	256
HspAI	GCGC	1 cut(s)	256
KasI	GGCGCC	1 cut(s)	255
Kpn2I	TCCGGA	1 cut(s)	1541
Ksp22I	TGATCA	1 cut(s)	388
Kzo9I	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
LmnI	GCTCC	4 cut(s)	157, 692, 818, 1286
Lsp1109I	GCAGC	3 cut(s)	221, 616, 1442
LweI	GCATC	7 cut(s)	71, 238, 406, 954, 1097, 1282, 1661
MabI	ACCWGGT	1 cut(s)	1027
MaeI	CTAG	5 cut(s)	240, 444, 735, 768, 1746
MaeII	ACGT	2 cut(s)	697, 1435
MaeIII	GTNAC	3 cut(s)	194, 1346, 1838
MalI	GATC	9 cut(s)	336, 390, 897, 960, 1209, 1384, 1479, 1602, 1693
MbiI	CCGCTC	1 cut(s)	1532
MboI	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
MboII	GAAGA	6 cut(s)	110, 129, 374, 634, 773, 1009
MflI	RGATCY	2 cut(s)	895, 1207
MhlI	GDGCHC	5 cut(s)	219, 607, 697, 823, 1819
MluCI	AATT	9 cut(s)	31, 508, 773, 990, 1105, 1152, 1407, 1471, 1573
Mly113I	GGCGCC	1 cut(s)	256
MlyI	GAGTC	2 cut(s)	538, 1190
MmeI	TCCRAC	3 cut(s)	74, 278, 1105
Mph1103I	ATGCAT	2 cut(s)	1297, 1654
MroI	TCCGGA	1 cut(s)	1541
MroXI	GAANNNNTTC	2 cut(s)	476, 775
MseI	TTAA	4 cut(s)	408, 512, 1151, 1563
MspA1I	CMGCKG	2 cut(s)	212, 629
MspI	CCGG	7 cut(s)	149, 434, 881, 1328, 1510, 1542, 1800
MspR9I	CCNGG	8 cut(s)	149, 223, 261, 434, 882, 1029, 1800, 1821
Mva1269I	GAATGC	1 cut(s)	1556
MvaI	CCWGG	4 cut(s)	223, 261, 1029, 1821
MwoI	GCNNNNNNNGC	3 cut(s)	84, 218, 227
NarI	GGCGCC	1 cut(s)	256
NciI	CCSGG	4 cut(s)	149, 434, 882, 1800
NdeII	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
NlaIV	GGNNCC	9 cut(s)	153, 217, 257, 323, 1288, 1797, 1816, 1817, 1818
NmuCI	GTSAC	1 cut(s)	1346
NsiI	ATGCAT	2 cut(s)	1297, 1654
NspI	RCATGY	1 cut(s)	1021
PasI	CCCWGGG	1 cut(s)	1820
PcsI	WCGNNNNNNNCGW	1 cut(s)	694
PctI	GAATGC	1 cut(s)	1556
PdmI	GAANNNNTTC	2 cut(s)	476, 775
PfeI	GAWTC	4 cut(s)	20, 46, 657, 1684
PflMI	CCANNNNNTGG	2 cut(s)	56, 1857
PfoI	TCCNGGA	1 cut(s)	880
PkrI	GCNGC	4 cut(s)	211, 631, 1432, 1676
PleI	GAGTC	2 cut(s)	538, 1189
PluTI	GGCGCC	1 cut(s)	259
PmaCI	CACGTG	1 cut(s)	1436
PmlI	CACGTG	1 cut(s)	1436
PpsI	GAGTC	2 cut(s)	538, 1189
Ppu21I	YACGTR	2 cut(s)	698, 1436
Psp6I	CCWGG	4 cut(s)	221, 259, 1027, 1819
PspCI	CACGTG	1 cut(s)	1436
PspFI	CCCAGC	2 cut(s)	212, 251
PspGI	CCWGG	4 cut(s)	221, 259, 1027, 1819
PspN4I	GGNNCC	9 cut(s)	153, 217, 257, 323, 1288, 1797, 1816, 1817, 1818
PspOMI	GGGCCC	2 cut(s)	215, 1815
PspPI	GGNCC	7 cut(s)	203, 215, 216, 322, 1815, 1816, 1832
PstI	CTGCAG	1 cut(s)	211
PstNI	CAGNNNCTG	3 cut(s)	23, 1084, 1378
PsuI	RGATCY	2 cut(s)	895, 1207
PvuII	CAGCTG	2 cut(s)	212, 629
RsaI	GTAC	4 cut(s)	700, 707, 1144, 1629
RsaNI	GTAC	4 cut(s)	699, 706, 1143, 1628
SaqAI	TTAA	4 cut(s)	408, 512, 1151, 1563
SatI	GCNGC	4 cut(s)	210, 630, 1431, 1675
Sau3AI	GATC	9 cut(s)	334, 388, 895, 958, 1207, 1382, 1477, 1600, 1691
Sau96I	GGNCC	7 cut(s)	203, 215, 216, 322, 1815, 1816, 1832
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	2 cut(s)	538, 1190
ScrFI	CCNGG	8 cut(s)	149, 223, 261, 434, 882, 1029, 1800, 1821
SduI	GDGCHC	5 cut(s)	219, 607, 697, 823, 1819
SexAI	ACCWGGT	1 cut(s)	1027
SfaNI	GCATC	7 cut(s)	71, 238, 406, 954, 1097, 1282, 1661
SfcI	CTRYAG	1 cut(s)	207
SfoI	GGCGCC	1 cut(s)	257
SinI	GGWCC	1 cut(s)	322
SmiI	ATTTAAAT	1 cut(s)	513
SmlI	CTYRAG	3 cut(s)	36, 848, 902
SmoI	CTYRAG	3 cut(s)	36, 848, 902
SpeI	ACTAGT	1 cut(s)	443
Sse9I	AATT	9 cut(s)	31, 508, 773, 990, 1105, 1152, 1407, 1471, 1573
SsiI	CCGC	7 cut(s)	110, 219, 312, 586, 1532, 1674, 1677
SspDI	GGCGCC	1 cut(s)	255
SspI	AATATT	1 cut(s)	517
SspMI	CTAG	5 cut(s)	240, 444, 735, 768, 1746
StyD4I	CCNGG	8 cut(s)	147, 221, 259, 432, 880, 1027, 1798, 1819
SwaI	ATTTAAAT	1 cut(s)	513
TaiI	ACGT	2 cut(s)	700, 1438
TaqI	TCGA	1 cut(s)	283
TasI	AATT	9 cut(s)	31, 508, 773, 990, 1105, 1152, 1407, 1471, 1573
TatI	WGTACW	1 cut(s)	1142
TauI	GCSGC	1 cut(s)	1677
TfiI	GAWTC	4 cut(s)	20, 46, 657, 1684
Tru1I	TTAA	4 cut(s)	408, 512, 1151, 1563
Tru9I	TTAA	4 cut(s)	408, 512, 1151, 1563
TscAI	CASTG	7 cut(s)	61, 205, 280, 406, 1310, 1383, 1858
TseFI	GTSAC	1 cut(s)	1346
TseI	GCWGC	3 cut(s)	209, 629, 1430
Tsp45I	GTSAC	1 cut(s)	1346
TspDTI	ATGAA	6 cut(s)	375, 774, 1205, 1229, 1331, 1331
TspRI	CASTG	7 cut(s)	61, 205, 280, 406, 1310, 1383, 1858
Van91I	CCANNNNNTGG	2 cut(s)	56, 1857
VpaK11BI	GGWCC	1 cut(s)	322
XagI	CCTNNNNNAGG	2 cut(s)	1026, 1744
XapI	RAATTY	3 cut(s)	508, 773, 1471
XbaI	TCTAGA	1 cut(s)	239
XceI	RCATGY	1 cut(s)	1021
XmnI	GAANNNNTTC	2 cut(s)	476, 775
XspI	CTAG	5 cut(s)	240, 444, 735, 768, 1746
ZrmI	AGTACT	1 cut(s)	1144
Zsp2I	ATGCAT	2 cut(s)	1297, 1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.