Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Forward (+)

14129175 .. 14130632

Gene Structure 1458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0168400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGTCCAACATTGATGCTGTAACCTCGTCCTTTGCTGCATCACTTGCGCTTGCTAGCAGTGATGTCGTAGATGTCTCAAGAGCCTCGAATGGAATCCAGCGACGTGCCAAGCAATCTTTTCTGTTGGCACGTCCTCTGGTGAAGAAACCGGCTGCTTTGAATGATCTGAAACGTTTTTTCCGGCGAGTATGGGTCCTTGACAAAGGTTTCAAGATTCAAGAGCGGGCTCCAAACCGTTTTGTCCTGGAATTTGATTTGCGCAAGGATCGTAGCAAGGTTTTAAAGGGTGGACCATGGCGTTTTAACCAGGCTCCGGTTGTGCTTCAGGAGTATGATGGCATCAAGGCTATTGAAGAGGTTGATCTGACTGTCCTCTTCTTCTGGGTTCGACTTAGTAATATTCCGCCATTGTTTGAGGAGCCTGACATGATCAGAGGTATTGCTTCTGTGGCTGGTAAGTATCTTGAGTTGGATGATAAACTCTTTGCAAATACGGGTAAGGTTAGGGTTCATGTGGCACATGATATTTCGAAACCTTTTTTCCTCAAGAAAACCCTAAAACTGGCACCTGGAGTAGAGGTTGAAATTTCATATTTTTTTGAAAACCTGGTAGGCAAGTGTGATCATTGCAATTTGATTTATCATGAGGGAGACTATTGCCCTTTGCTTGGTAGCCATGCCACAACAGGTATAAGACGCAGCACTGGAGAACAGAGGAAGGATTTGGTTGGTCCTTCTCTAGGTTTTGCGGCTAACACTTTTGTAGATGGAACCTTTCGTTTTCAAGGTGTGCAGACACCTATTTTGCCATCTATCTACAGGTCCTTATTCCAGCCCAAGGAAGCTTCTAAAGCACGCAAACCTATCATACTGCGTGATAGAGTCCTAAGTGCCACAGAAATGGAGAAGGAGGTGCACCAACCTTTAGCGTTGGCAGTAATTGCAGCTCCGGACATGGAGGTCTCATCTTCTGAACTTATCGCTCCAAGTGAAGGCATGGAATTTGATAAGAAGGTAGGGTCTGCAAGAAATAGCCCGAAGGCCTCTAAGGATGCAGAACCAGCTGTACCGGTTGAAGCAGCGAACAAGGAGAGTAGGGGTGACAAGCGTCACCTCCCCCCCTCTCCTTCAAAGTCTCCCCAAAAACTAAAGATTCTGCTACCAGAATTATTCAAACCGTTGCTGCCAGATATCCAGGCAAAGAAACAAAAACTGCCTATGTTTACAAGTAAGTTCTCTGCCAGATCTTTGGGTATGGTTGAAGCTCCTGGAAATATTTTAGTGCCTAAAGATGTGATGCAAACAAGCTCTGGCACAAAGAAGAAAAGAGGAAGGCCTCTGGGAGCAAAGAATAAAAATCCTCCAAAGTCAAAGAAGGTTGCGGATGCGCAAGAGACTTGTTTTGCTTATCTCTCCAAACCTCCTAGCCCAATTGTTAAGGGCAAGGAGAAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

485

Amino Acids

53.74

Weight (kDa)

9.78

Isoelectric Point (pI)

44.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4283	PF14111	38 - 111	3.7e-12	Domain of unknown function (DUF4283)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	959
Acc16I	TGCGCA	2 cut(s)	260, 1389
AccB1I	GGYRCC	1 cut(s)	565
AccBSI	CCGCTC	1 cut(s)	223
AccIII	TCCGGA	1 cut(s)	949
AciI	CCGC	4 cut(s)	223, 404, 749, 1382
AclI	AACGTT	1 cut(s)	172
AclWI	GGATC	1 cut(s)	273
AcsI	RAATTY	4 cut(s)	248, 585, 1001, 1452
AcuI	CTGAAG	1 cut(s)	308
AfaI	GTAC	1 cut(s)	1068
AfiI	CCNNNNNNNGG	6 cut(s)	313, 562, 668, 740, 838, 992
AgeI	ACCGGT	1 cut(s)	1069
AjiI	CACGTC	2 cut(s)	104, 131
AjnI	CCWGG	6 cut(s)	243, 306, 568, 606, 1194, 1267
AluBI	AGCT	5 cut(s)	845, 947, 1064, 1265, 1308
AluI	AGCT	5 cut(s)	845, 947, 1064, 1265, 1308
Alw21I	GWGCWC	1 cut(s)	918
Alw26I	GTCTC	5 cut(s)	79, 645, 967, 1140, 1388
Alw44I	GTGCAC	1 cut(s)	914
AlwI	GGATC	1 cut(s)	273
Aor13HI	TCCGGA	1 cut(s)	949
AoxI	GGCC	2 cut(s)	1041, 1334
ApaLI	GTGCAC	1 cut(s)	914
ApeKI	GCWGC	6 cut(s)	35, 152, 699, 944, 1079, 1183
ApoI	RAATTY	4 cut(s)	248, 585, 1001, 1452
ArsI	GACNNNNNNTTYG	2 cut(s)	787, 819
AsiGI	ACCGGT	1 cut(s)	1069
AspLEI	GCGC	3 cut(s)	49, 261, 1390
AspS9I	GGNCC	4 cut(s)	193, 290, 731, 822
AsuHPI	GGTGA	3 cut(s)	151, 1103, 1112
AsuII	TTCGAA	1 cut(s)	530
AsuNHI	GCTAGC	1 cut(s)	53
AvaII	GGWCC	4 cut(s)	193, 290, 731, 822
BaeGI	GKGCMC	1 cut(s)	918
BanI	GGYRCC	1 cut(s)	565
BanII	GRGCYC	1 cut(s)	229
Bbv12I	GWGCWC	1 cut(s)	918
BbvI	GCAGC	6 cut(s)	22, 139, 711, 956, 1091, 1170
BccI	CCATC	3 cut(s)	329, 761, 817
BcgI	CGANNNNNNTGC	2 cut(s)	46, 80
BciT130I	CCWGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
BclI	TGATCA	2 cut(s)	429, 622
BcoDI	GTCTC	5 cut(s)	79, 645, 967, 1140, 1388
BfaI	CTAG	3 cut(s)	54, 740, 1425
BfmI	CTRYAG	1 cut(s)	817
BglII	AGATCT	1 cut(s)	1244
BisI	GCNGC	7 cut(s)	36, 153, 700, 750, 945, 1080, 1184
BlsI	GCNGC	7 cut(s)	37, 154, 701, 751, 946, 1081, 1185
Bme1390I	CCNGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
Bme18I	GGWCC	4 cut(s)	193, 290, 731, 822
BmgBI	CACGTC	2 cut(s)	104, 131
BmgT120I	GGNCC	4 cut(s)	193, 290, 731, 822
BmiI	GGNNCC	6 cut(s)	194, 228, 312, 420, 567, 772
BmrFI	CCNGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
BmsI	GCATC	6 cut(s)	4, 47, 348, 1042, 1287, 1375
BmtI	GCTAGC	1 cut(s)	57
BoxI	GACNNNNGTC	1 cut(s)	1107
BpmI	CTGGAG	2 cut(s)	591, 726
Bpu14I	TTCGAA	1 cut(s)	530
BpuEI	CTTGAG	3 cut(s)	61, 485, 530
BsaI	GGTCTC	1 cut(s)	967
BsaJI	CCNNGG	2 cut(s)	293, 837
BsaWI	WCCGGW	3 cut(s)	313, 949, 1069
BsaXI	ACNNNNNCTCC	2 cut(s)	564, 594
Bsc4I	CCNNNNNNNGG	6 cut(s)	313, 562, 668, 740, 838, 992
Bse118I	RCCGGY	2 cut(s)	148, 1069
Bse1I	ACTGG	2 cut(s)	567, 709
Bse3DI	GCAATG	1 cut(s)	625
BseAI	TCCGGA	1 cut(s)	949
BseBI	CCWGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
BseDI	CCNNGG	2 cut(s)	293, 837
BseGI	GGATG	3 cut(s)	478, 1057, 1390
BseLI	CCNNNNNNNGG	6 cut(s)	313, 562, 668, 740, 838, 992
BseMI	GCAATG	1 cut(s)	625
BseNI	ACTGG	2 cut(s)	567, 709
BseRI	GAGGAG	1 cut(s)	431
BseSI	GKGCMC	1 cut(s)	918
BseXI	GCAGC	6 cut(s)	22, 139, 711, 956, 1091, 1170
BsgI	GTGCAG	1 cut(s)	812
BshFI	GGCC	2 cut(s)	1043, 1336
BshNI	GGYRCC	1 cut(s)	565
BshTI	ACCGGT	1 cut(s)	1069
BsiHKAI	GWGCWC	1 cut(s)	918
BsiSI	CCGG	5 cut(s)	149, 181, 314, 950, 1070
BslI	CCNNNNNNNGG	6 cut(s)	313, 562, 668, 740, 838, 992
BsmAI	GTCTC	5 cut(s)	79, 645, 967, 1140, 1388
BsnI	GGCC	2 cut(s)	1043, 1336
Bso31I	GGTCTC	1 cut(s)	967
Bsp119I	TTCGAA	1 cut(s)	530
Bsp1286I	GDGCHC	2 cut(s)	229, 918
Bsp13I	TCCGGA	1 cut(s)	949
Bsp143I	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
Bsp19I	CCATGG	1 cut(s)	293
BspACI	CCGC	4 cut(s)	223, 404, 749, 1382
BspANI	GGCC	2 cut(s)	1043, 1336
BspEI	TCCGGA	1 cut(s)	949
BspHI	TCATGA	1 cut(s)	643
BspLI	GGNNCC	6 cut(s)	194, 228, 312, 420, 567, 772
BspOI	GCTAGC	1 cut(s)	57
BspPI	GGATC	1 cut(s)	273
BspT104I	TTCGAA	1 cut(s)	530
BspT107I	GGYRCC	1 cut(s)	565
BspTNI	GGTCTC	1 cut(s)	967
BsrBI	CCGCTC	1 cut(s)	223
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	2 cut(s)	148, 1069
BsrI	ACTGG	2 cut(s)	567, 709
BssAI	RCCGGY	2 cut(s)	148, 1069
BssECI	CCNNGG	2 cut(s)	293, 837
BssMI	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
BssT1I	CCWWGG	2 cut(s)	293, 837
Bst2UI	CCWGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
Bst4CI	ACNGT	3 cut(s)	236, 370, 1179
Bst6I	CTCTTC	2 cut(s)	348, 380
BstAPI	GCANNNNNTGC	2 cut(s)	44, 941
BstBI	TTCGAA	1 cut(s)	530
BstC8I	GCNNGC	4 cut(s)	51, 55, 225, 856
BstDEI	CTNAG	3 cut(s)	392, 887, 1047
BstDSI	CCRYGG	1 cut(s)	293
BstENI	CCTNNNNNAGG	1 cut(s)	738
BstF5I	GGATG	3 cut(s)	478, 1057, 1390
BstHHI	GCGC	3 cut(s)	49, 261, 1390
BstKTI	GATC	6 cut(s)	166, 268, 364, 432, 625, 1247
BstMAI	GTCTC	5 cut(s)	79, 645, 967, 1140, 1388
BstMBI	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 449, 851, 941, 1061
BstNI	CCWGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
BstPAI	GACNNNNGTC	1 cut(s)	1107
BstSCI	CCNGG	6 cut(s)	243, 306, 568, 606, 1194, 1267
BstSFI	CTRYAG	1 cut(s)	817
BstSLI	GKGCMC	1 cut(s)	918
BstV1I	GCAGC	6 cut(s)	22, 139, 711, 956, 1091, 1170
BstX2I	RGATCY	1 cut(s)	1244
BstXI	CCANNNNNNTGG	2 cut(s)	901, 1249
BstYI	RGATCY	1 cut(s)	1244
BsuRI	GGCC	2 cut(s)	1043, 1336
BtgI	CCRYGG	1 cut(s)	293
BtrI	CACGTC	2 cut(s)	104, 131
BtsCI	GGATG	3 cut(s)	478, 1057, 1390
BtsI	GCAGTG	1 cut(s)	64
BtsIMutI	CAGTG	2 cut(s)	64, 702
Cac8I	GCNNGC	4 cut(s)	51, 55, 225, 856
CciI	TCATGA	1 cut(s)	643
CfoI	GCGC	3 cut(s)	49, 261, 1390
Cfr10I	RCCGGY	2 cut(s)	148, 1069
Cfr13I	GGNCC	4 cut(s)	193, 290, 731, 822
CseI	GACGC	2 cut(s)	705, 1097
CsiI	ACCWGGT	1 cut(s)	606
Csp6I	GTAC	1 cut(s)	1067
CspAI	ACCGGT	1 cut(s)	1069
CviAII	CATG	8 cut(s)	294, 427, 512, 521, 644, 677, 955, 997
CviQI	GTAC	1 cut(s)	1067
DdeI	CTNAG	3 cut(s)	392, 887, 1047
DpnI	GATC	6 cut(s)	165, 267, 363, 431, 624, 1246
DpnII	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
DraI	TTTAAA	1 cut(s)	282
DrdI	GACNNNNNNGTC	1 cut(s)	959
DseDI	GACNNNNNNGTC	1 cut(s)	959
Eam1104I	CTCTTC	2 cut(s)	348, 380
EarI	CTCTTC	2 cut(s)	348, 380
EciI	GGCGGA	1 cut(s)	393
Eco130I	CCWWGG	2 cut(s)	293, 837
Eco147I	AGGCCT	2 cut(s)	1043, 1336
Eco24I	GRGCYC	1 cut(s)	229
Eco31I	GGTCTC	1 cut(s)	967
Eco32I	GATATC	1 cut(s)	1192
Eco47I	GGWCC	4 cut(s)	193, 290, 731, 822
Eco57I	CTGAAG	1 cut(s)	308
EcoNI	CCTNNNNNAGG	1 cut(s)	738
EcoO109I	RGGNCCY	2 cut(s)	193, 822
EcoRII	CCWGG	6 cut(s)	243, 306, 568, 606, 1194, 1267
EcoRV	GATATC	1 cut(s)	1192
EcoT14I	CCWWGG	2 cut(s)	293, 837
EcoT38I	GRGCYC	1 cut(s)	229
ErhI	CCWWGG	2 cut(s)	293, 837
FaeI	CATG	8 cut(s)	297, 430, 515, 524, 647, 680, 958, 1000
FatI	CATG	8 cut(s)	293, 426, 511, 520, 643, 676, 954, 996
FauI	CCCGC	1 cut(s)	216
FbaI	TGATCA	2 cut(s)	429, 622
Fnu4HI	GCNGC	7 cut(s)	36, 153, 700, 750, 945, 1080, 1184
FokI	GGATG	3 cut(s)	485, 1064, 1397
FriOI	GRGCYC	1 cut(s)	229
Fsp4HI	GCNGC	7 cut(s)	36, 153, 700, 750, 945, 1080, 1184
FspBI	CTAG	3 cut(s)	54, 740, 1425
FspI	TGCGCA	2 cut(s)	260, 1389
GlaI	GCGC	3 cut(s)	48, 260, 1389
GluI	GCNGC	7 cut(s)	36, 153, 700, 750, 945, 1080, 1184
GsuI	CTGGAG	2 cut(s)	591, 726
HaeIII	GGCC	2 cut(s)	1043, 1336
HapII	CCGG	5 cut(s)	149, 181, 314, 950, 1070
HgaI	GACGC	2 cut(s)	705, 1097
HhaI	GCGC	3 cut(s)	49, 261, 1390
Hin1II	CATG	8 cut(s)	297, 430, 515, 524, 647, 680, 958, 1000
Hin6I	GCGC	3 cut(s)	47, 259, 1388
HinP1I	GCGC	3 cut(s)	47, 259, 1388
HindIII	AAGCTT	1 cut(s)	843
HinfI	GANTC	4 cut(s)	93, 214, 882, 1153
HpaII	CCGG	5 cut(s)	149, 181, 314, 950, 1070
HphI	GGTGA	3 cut(s)	151, 1103, 1112
Hpy166II	GTNNAC	3 cut(s)	290, 916, 1224
Hpy188I	TCNGA	4 cut(s)	168, 366, 434, 973
Hpy188III	TCNNGA	8 cut(s)	78, 211, 218, 326, 464, 547, 644, 950
Hpy8I	GTNNAC	3 cut(s)	290, 916, 1224
Hpy99I	CGWCG	1 cut(s)	105
HpyAV	CCTTC	9 cut(s)	712, 744, 901, 986, 1006, 1033, 1137, 1326, 1369
HpyCH4III	ACNGT	3 cut(s)	236, 370, 1179
HpyCH4IV	ACGT	3 cut(s)	103, 130, 172
HpyCH4V	TGCA	9 cut(s)	38, 488, 630, 793, 916, 944, 1025, 1055, 1300
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 449, 851, 941, 1061
HpyF3I	CTNAG	3 cut(s)	392, 887, 1047
HpySE526I	ACGT	3 cut(s)	103, 130, 172
Hsp92II	CATG	8 cut(s)	297, 430, 515, 524, 647, 680, 958, 1000
HspAI	GCGC	3 cut(s)	47, 259, 1388
Kpn2I	TCCGGA	1 cut(s)	949
Ksp22I	TGATCA	2 cut(s)	429, 622
Kzo9I	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
LmnI	GCTCC	7 cut(s)	232, 316, 418, 952, 988, 1270, 1343
Lsp1109I	GCAGC	6 cut(s)	22, 139, 711, 956, 1091, 1170
LweI	GCATC	6 cut(s)	4, 47, 348, 1042, 1287, 1375
MabI	ACCWGGT	1 cut(s)	606
MaeI	CTAG	3 cut(s)	54, 740, 1425
MaeII	ACGT	3 cut(s)	103, 130, 172
MaeIII	GTNAC	3 cut(s)	19, 1100, 1109
MalI	GATC	6 cut(s)	165, 267, 363, 431, 624, 1246
MbiI	CCGCTC	1 cut(s)	223
MboI	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
MboII	GAAGA	6 cut(s)	154, 365, 367, 370, 960, 1333
MfeI	CAATTG	1 cut(s)	1431
MflI	RGATCY	1 cut(s)	1244
MhlI	GDGCHC	2 cut(s)	229, 918
MluCI	AATT	8 cut(s)	248, 585, 631, 939, 1001, 1166, 1431, 1452
MlyI	GAGTC	1 cut(s)	891
MmeI	TCCRAC	2 cut(s)	30, 450
MroI	TCCGGA	1 cut(s)	949
MseI	TTAA	4 cut(s)	281, 303, 1437, 1456
MslI	CAYNNNNRTG	1 cut(s)	899
MspA1I	CMGCKG	1 cut(s)	1064
MspI	CCGG	5 cut(s)	149, 181, 314, 950, 1070
MspR9I	CCNGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
MunI	CAATTG	1 cut(s)	1431
MvaI	CCWGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
MwoI	GCNNNNNNNGC	5 cut(s)	44, 449, 851, 941, 1061
NcoI	CCATGG	1 cut(s)	293
NdeII	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
NheI	GCTAGC	1 cut(s)	53
NlaIII	CATG	8 cut(s)	297, 430, 515, 524, 647, 680, 958, 1000
NlaIV	GGNNCC	6 cut(s)	194, 228, 312, 420, 567, 772
NmuCI	GTSAC	2 cut(s)	1100, 1109
NsbI	TGCGCA	2 cut(s)	260, 1389
NspV	TTCGAA	1 cut(s)	530
PagI	TCATGA	1 cut(s)	643
PceI	AGGCCT	2 cut(s)	1043, 1336
PfeI	GAWTC	3 cut(s)	93, 214, 1153
PfoI	TCCNGGA	2 cut(s)	243, 1267
PinAI	ACCGGT	1 cut(s)	1069
PkrI	GCNGC	7 cut(s)	37, 154, 701, 751, 946, 1081, 1185
PleI	GAGTC	1 cut(s)	890
PpsI	GAGTC	1 cut(s)	890
PpuMI	RGGWCCY	2 cut(s)	193, 822
PshAI	GACNNNNGTC	1 cut(s)	1107
Psp1406I	AACGTT	1 cut(s)	172
Psp5II	RGGWCCY	2 cut(s)	193, 822
Psp6I	CCWGG	6 cut(s)	243, 306, 568, 606, 1194, 1267
PspGI	CCWGG	6 cut(s)	243, 306, 568, 606, 1194, 1267
PspN4I	GGNNCC	6 cut(s)	194, 228, 312, 420, 567, 772
PspPI	GGNCC	4 cut(s)	193, 290, 731, 822
PspPPI	RGGWCCY	2 cut(s)	193, 822
PsrI	GAACNNNNNNTAC	2 cut(s)	1050, 1082
PsuI	RGATCY	1 cut(s)	1244
PvuII	CAGCTG	1 cut(s)	1064
RsaI	GTAC	1 cut(s)	1068
RsaNI	GTAC	1 cut(s)	1067
RseI	CAYNNNNRTG	1 cut(s)	899
SaqAI	TTAA	4 cut(s)	281, 303, 1437, 1456
SatI	GCNGC	7 cut(s)	36, 153, 700, 750, 945, 1080, 1184
Sau3AI	GATC	6 cut(s)	163, 265, 361, 429, 622, 1244
Sau96I	GGNCC	4 cut(s)	193, 290, 731, 822
SchI	GAGTC	1 cut(s)	891
ScrFI	CCNGG	6 cut(s)	245, 308, 570, 608, 1196, 1269
SduI	GDGCHC	2 cut(s)	229, 918
SexAI	ACCWGGT	1 cut(s)	606
SfaNI	GCATC	6 cut(s)	4, 47, 348, 1042, 1287, 1375
SfcI	CTRYAG	1 cut(s)	817
SfuI	TTCGAA	1 cut(s)	530
SinI	GGWCC	4 cut(s)	193, 290, 731, 822
SmiMI	CAYNNNNRTG	1 cut(s)	899
SmlI	CTYRAG	3 cut(s)	76, 464, 545
SmoI	CTYRAG	3 cut(s)	76, 464, 545
Sse9I	AATT	8 cut(s)	248, 585, 631, 939, 1001, 1166, 1431, 1452
SseBI	AGGCCT	2 cut(s)	1043, 1336
SsiI	CCGC	4 cut(s)	223, 404, 749, 1382
SspI	AATATT	2 cut(s)	400, 1276
SspMI	CTAG	3 cut(s)	54, 740, 1425
StuI	AGGCCT	2 cut(s)	1043, 1336
StyD4I	CCNGG	6 cut(s)	243, 306, 568, 606, 1194, 1267
StyI	CCWWGG	2 cut(s)	293, 837
TaaI	ACNGT	3 cut(s)	236, 370, 1179
TaiI	ACGT	3 cut(s)	106, 133, 175
TaqI	TCGA	3 cut(s)	86, 388, 530
TasI	AATT	8 cut(s)	248, 585, 631, 939, 1001, 1166, 1431, 1452
TauI	GCSGC	1 cut(s)	752
TfiI	GAWTC	3 cut(s)	93, 214, 1153
Tru1I	TTAA	4 cut(s)	281, 303, 1437, 1456
Tru9I	TTAA	4 cut(s)	281, 303, 1437, 1456
TscAI	CASTG	2 cut(s)	64, 709
TseFI	GTSAC	2 cut(s)	1100, 1109
TseI	GCWGC	6 cut(s)	35, 152, 699, 944, 1079, 1183
Tsp45I	GTSAC	2 cut(s)	1100, 1109
TspDTI	ATGAA	2 cut(s)	500, 579
TspRI	CASTG	2 cut(s)	64, 709
VneI	GTGCAC	1 cut(s)	914
VpaK11BI	GGWCC	4 cut(s)	193, 290, 731, 822
XagI	CCTNNNNNAGG	1 cut(s)	738
XapI	RAATTY	4 cut(s)	248, 585, 1001, 1452
XspI	CTAG	3 cut(s)	54, 740, 1425

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.