Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Reverse (-)

87363927 .. 87367707

Gene Structure 3781 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036991

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGCGAGCTTCATGGGCAGATTTGGCTGCAAATTCTGCAGCTGAGAATGTAGGTTCTGGGTCTTCTGCTAACAGCGCTGCCGGTGGTGCTCCCACTGCTGGTGCTCCGTCGCGGTCCACCTACGTCCCCCCGCATCTGCGTAACCGTCTGCCTTCATCGGATCCACCTGCTCCGGCGTATAGTGCGCCTGCTGGGAATGATCGAGGTGGGTATGGTGGATCTCGTTGGGGTGGTGGCAGGAATGACAACAGTCGGTCTGGGTATGGAGGGAGTGGCGGCGGCGGCGGCCGCGGTGGTGGATGGGGAGGTGGCAGAGGTGGTGGTTGGGACCGTGGGAGGGACAGGGAAGTGAACCCCTTTGAAGATGATGACGAAACAGAACAGCCGTTTAGTGAGCAGGAGAACAGTGGCATTAATTTTGATGCCTATGAAGACATTCCTGTGGAGACGAGTGGTGACAATGTTCCACCCCCTGTGAATACATTTGCAGAGATTGACTTGGGTGACGCACTTAATAAAAATATTCAGAGGTGCAAATATGTGAAACCAACACCTGTGCAGCGGCATGCCATTCCAATCTCCCTTGGAGGTCGGGACTTGATGGCATGTGCTCAAACTGGTTCTGGCAAGACAGCTGCTTTCTGTTTCCCTATCATTAGTGGAATCATGAAGGGCCAACCTCCACAGAGACCGCCCCGTTCACATACAGCTTGCCCACTTGCTCTCATTTTATCTCCTACTAGGGAGCTTTCTTCTCAAATACACGAGGAAGCTAAGAAATTTTCATATCAAACTGGTGTCAGAGCTGTTGTTGCTTATGGAGGAGCTCCAATTCATCAACAGCTGCGGGAACTGGAAAGAGGTGTTGATATTCTTGTGGCAACTCCTGGAAGATTGGTGGATTTACTGGAGAGAGCTAGAGTGTCATTGCAGAATATTAGGTATTTAGCCCTTGATGAGGCTGATCGAATGCTGGACATGGGTTTTGAACCCCAAATAAGGAAAATTGTGGAACAAATGGACATGCCTCCACCAGGTGTGCGACAGACTATGTTGTTCAGTGCCACCTTTCCAAAAGAAATACAGAGACTGGCCTCTGATTTTCTTGCAAAGTACATTTTTCTGGCTGTTGGAAGGGTGGGTTCTAGTACTGATTTGATTGTCCAACGAGTGGAATTTGTTCATGAATCTGATAAAAGAAGTCACCTTATGGACCTTCTGCATGCACAGAGGGCCAATGGTACACAGGGGAAGGTATACTTAGGAAACTCAGTTTTGTTAATCTTTTTGAATGGTCCGGGTAGGATTAGGAGTTGTCATGTGAGCTGTTTTTTTCCTACTCACTTTCTTAATTTTTGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

455

Amino Acids

48.86

Weight (kDa)

7.66

Isoelectric Point (pI)

49.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	184 - 363	3e-50	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	175
Acc36I	ACCTGC	1 cut(s)	175
AccB7I	CCANNNNNTGG	1 cut(s)	1171
AccI	GTMKAC	1 cut(s)	1257
AccII	CGCG	2 cut(s)	112, 291
AclWI	GGATC	3 cut(s)	155, 168, 226
AcoI	YGGCCR	1 cut(s)	286
AcsI	RAATTY	3 cut(s)	31, 779, 1175
AdeI	CACNNNGTG	1 cut(s)	1037
AfaI	GTAC	3 cut(s)	1115, 1150, 1243
AfeI	AGCGCT	1 cut(s)	76
AfiI	CCNNNNNNNGG	6 cut(s)	98, 337, 958, 999, 1034, 1171
AgsI	TTSAA	3 cut(s)	362, 989, 1291
AjnI	CCWGG	2 cut(s)	886, 1033
Alw21I	GWGCWC	4 cut(s)	91, 106, 613, 829
Alw26I	GTCTC	3 cut(s)	440, 682, 1081
AlwI	GGATC	3 cut(s)	155, 168, 226
AlwNI	CAGNNNCTG	1 cut(s)	1090
Aor51HI	AGCGCT	1 cut(s)	76
AoxI	GGCC	4 cut(s)	286, 673, 1092, 1233
ApeKI	GCWGC	6 cut(s)	26, 38, 77, 559, 635, 844
ApoI	RAATTY	3 cut(s)	31, 779, 1175
ArsI	GACNNNNNNTTYG	2 cut(s)	968, 1000
AseI	ATTAAT	1 cut(s)	414
Asp700I	GAANNNNTTC	2 cut(s)	435, 1179
AspLEI	GCGC	2 cut(s)	77, 187
AspS9I	GGNCC	6 cut(s)	114, 328, 673, 1213, 1233, 1295
AsuC2I	CCSGG	1 cut(s)	1299
AsuHPI	GGTGA	3 cut(s)	467, 515, 1196
AvaII	GGWCC	4 cut(s)	114, 328, 1213, 1295
BamHI	GGATCC	1 cut(s)	160
BanII	GRGCYC	1 cut(s)	829
BauI	CACGAG	1 cut(s)	764
BbsI	GAAGAC	2 cut(s)	54, 438
Bbv12I	GWGCWC	4 cut(s)	91, 106, 613, 829
BbvI	GCAGC	6 cut(s)	13, 50, 64, 571, 622, 831
BccI	CCATC	2 cut(s)	294, 595
BceAI	ACGGC	1 cut(s)	370
BciT130I	CCWGG	2 cut(s)	888, 1035
BcnI	CCSGG	1 cut(s)	1299
BcoDI	GTCTC	3 cut(s)	440, 682, 1081
BfaI	CTAG	3 cut(s)	741, 918, 1146
BfmI	CTRYAG	1 cut(s)	36
BfoI	RGCGCY	1 cut(s)	78
BfuAI	ACCTGC	1 cut(s)	175
BmcAI	AGTACT	1 cut(s)	1150
Bme1390I	CCNGG	3 cut(s)	888, 1035, 1299
Bme18I	GGWCC	4 cut(s)	114, 328, 1213, 1295
BmgT120I	GGNCC	6 cut(s)	114, 328, 673, 1213, 1233, 1295
BmiI	GGNNCC	2 cut(s)	162, 329
BmrFI	CCNGG	3 cut(s)	888, 1035, 1299
BmsI	GCATC	2 cut(s)	142, 412
BoxI	GACNNNNGTC	1 cut(s)	249
BpiI	GAAGAC	2 cut(s)	54, 438
BpmI	CTGGAG	1 cut(s)	929
BpuMI	CCSGG	1 cut(s)	1299
BsaI	GGTCTC	1 cut(s)	682
BsaJI	CCNNGG	3 cut(s)	289, 331, 583
Bsc4I	CCNNNNNNNGG	6 cut(s)	98, 337, 958, 999, 1034, 1171
Bse118I	RCCGGY	1 cut(s)	80
Bse1I	ACTGG	5 cut(s)	622, 799, 858, 912, 1095
Bse3DI	GCAATG	1 cut(s)	926
BseBI	CCWGG	2 cut(s)	888, 1035
BseDI	CCNNGG	3 cut(s)	289, 331, 583
BseGI	GGATG	1 cut(s)	305
BseLI	CCNNNNNNNGG	6 cut(s)	98, 337, 958, 999, 1034, 1171
BseMI	GCAATG	1 cut(s)	926
BseMII	CTCAG	2 cut(s)	33, 1284
BseNI	ACTGG	5 cut(s)	622, 799, 858, 912, 1095
BseRI	GAGGAG	1 cut(s)	837
BseX3I	CGGCCG	1 cut(s)	286
BseXI	GCAGC	6 cut(s)	13, 50, 64, 571, 622, 831
BseYI	CCCAGC	1 cut(s)	191
BsgI	GTGCAG	1 cut(s)	578
Bsh1236I	CGCG	2 cut(s)	112, 291
Bsh1285I	CGRYCG	1 cut(s)	289
BshFI	GGCC	4 cut(s)	288, 675, 1094, 1235
BsiEI	CGRYCG	1 cut(s)	289
BsiHKAI	GWGCWC	4 cut(s)	91, 106, 613, 829
BsiSI	CCGG	3 cut(s)	81, 173, 1298
BslFI	GGGAC	4 cut(s)	110, 341, 353, 608
BslI	CCNNNNNNNGG	6 cut(s)	98, 337, 958, 999, 1034, 1171
BsmAI	GTCTC	3 cut(s)	440, 682, 1081
BsmBI	CGTCTC	1 cut(s)	440
BsmFI	GGGAC	4 cut(s)	110, 341, 353, 608
BsmI	GAATGC	1 cut(s)	975
BsnI	GGCC	4 cut(s)	288, 675, 1094, 1235
Bso31I	GGTCTC	1 cut(s)	682
Bsp1286I	GDGCHC	4 cut(s)	91, 106, 613, 829
Bsp143I	GATC	4 cut(s)	160, 199, 218, 964
BspANI	GGCC	4 cut(s)	288, 675, 1094, 1235
BspCNI	CTCAG	2 cut(s)	34, 1283
BspFNI	CGCG	2 cut(s)	112, 291
BspHI	TCATGA	2 cut(s)	666, 1183
BspLI	GGNNCC	2 cut(s)	162, 329
BspMAI	CTGCAG	1 cut(s)	40
BspMI	ACCTGC	1 cut(s)	175
BspPI	GGATC	3 cut(s)	155, 168, 226
BspTNI	GGTCTC	1 cut(s)	682
BsrDI	GCAATG	1 cut(s)	926
BsrFI	RCCGGY	1 cut(s)	80
BsrI	ACTGG	5 cut(s)	622, 799, 858, 912, 1095
BssAI	RCCGGY	1 cut(s)	80
BssECI	CCNNGG	3 cut(s)	289, 331, 583
BssMI	GATC	4 cut(s)	160, 199, 218, 964
BssNAI	GTATAC	1 cut(s)	1258
BssSI	CACGAG	1 cut(s)	764
BssT1I	CCWWGG	1 cut(s)	583
Bst1107I	GTATAC	1 cut(s)	1258
Bst2BI	CACGAG	1 cut(s)	764
Bst2UI	CCWGG	2 cut(s)	888, 1035
Bst4CI	ACNGT	4 cut(s)	146, 251, 332, 407
BstAPI	GCANNNNNTGC	1 cut(s)	35
BstC8I	GCNNGC	5 cut(s)	6, 189, 567, 712, 1224
BstDEI	CTNAG	4 cut(s)	42, 774, 1261, 1270
BstDSI	CCRYGG	2 cut(s)	289, 331
BstENI	CCTNNNNNAGG	2 cut(s)	956, 1032
BstF5I	GGATG	1 cut(s)	305
BstFNI	CGCG	2 cut(s)	112, 291
BstH2I	RGCGCY	1 cut(s)	78
BstHHI	GCGC	2 cut(s)	77, 187
BstKTI	GATC	4 cut(s)	163, 202, 221, 967
BstMAI	GTCTC	3 cut(s)	440, 682, 1081
BstMBI	GATC	4 cut(s)	160, 199, 218, 964
BstMCI	CGRYCG	1 cut(s)	289
BstNI	CCWGG	2 cut(s)	888, 1035
BstNSI	RCATGY	4 cut(s)	569, 609, 1027, 1226
BstPAI	GACNNNNGTC	1 cut(s)	249
BstSCI	CCNGG	3 cut(s)	886, 1033, 1297
BstSFI	CTRYAG	1 cut(s)	36
BstUI	CGCG	2 cut(s)	112, 291
BstV1I	GCAGC	6 cut(s)	13, 50, 64, 571, 622, 831
BstV2I	GAAGAC	2 cut(s)	54, 438
BstX2I	RGATCY	2 cut(s)	160, 218
BstYI	RGATCY	2 cut(s)	160, 218
BstZ17I	GTATAC	1 cut(s)	1258
BstZI	CGGCCG	1 cut(s)	286
BsuRI	GGCC	4 cut(s)	288, 675, 1094, 1235
BtgI	CCRYGG	2 cut(s)	289, 331
BtsCI	GGATG	1 cut(s)	305
BtsI	GCAGTG	1 cut(s)	93
BtsIMutI	CAGTG	3 cut(s)	93, 412, 1066
BveI	ACCTGC	1 cut(s)	175
Cac8I	GCNNGC	5 cut(s)	6, 189, 567, 712, 1224
CaiI	CAGNNNCTG	1 cut(s)	1090
CciI	TCATGA	2 cut(s)	666, 1183
CciNI	GCGGCCGC	1 cut(s)	286
CfoI	GCGC	2 cut(s)	77, 187
Cfr10I	RCCGGY	1 cut(s)	80
Cfr13I	GGNCC	6 cut(s)	114, 328, 673, 1213, 1233, 1295
Cfr42I	CCGCGG	1 cut(s)	292
CseI	GACGC	1 cut(s)	515
CsiI	ACCWGGT	1 cut(s)	1033
Csp6I	GTAC	3 cut(s)	1114, 1149, 1242
CviAII	CATG	9 cut(s)	12, 566, 606, 667, 979, 1024, 1184, 1223, 1319
CviQI	GTAC	3 cut(s)	1114, 1149, 1242
DdeI	CTNAG	4 cut(s)	42, 774, 1261, 1270
DpnI	GATC	4 cut(s)	162, 201, 220, 966
DpnII	GATC	4 cut(s)	160, 199, 218, 964
DraIII	CACNNNGTG	1 cut(s)	1037
EaeI	YGGCCR	1 cut(s)	286
EagI	CGGCCG	1 cut(s)	286
Ecl136II	GAGCTC	1 cut(s)	827
EclXI	CGGCCG	1 cut(s)	286
Eco130I	CCWWGG	1 cut(s)	583
Eco24I	GRGCYC	1 cut(s)	829
Eco31I	GGTCTC	1 cut(s)	682
Eco47I	GGWCC	4 cut(s)	114, 328, 1213, 1295
Eco47III	AGCGCT	1 cut(s)	76
Eco52I	CGGCCG	1 cut(s)	286
Eco53kI	GAGCTC	1 cut(s)	827
EcoICRI	GAGCTC	1 cut(s)	827
EcoNI	CCTNNNNNAGG	2 cut(s)	956, 1032
EcoRII	CCWGG	2 cut(s)	886, 1033
EcoT14I	CCWWGG	1 cut(s)	583
EcoT38I	GRGCYC	1 cut(s)	829
ErhI	CCWWGG	1 cut(s)	583
Esp3I	CGTCTC	1 cut(s)	440
FaeI	CATG	9 cut(s)	15, 569, 609, 670, 982, 1027, 1187, 1226, 1322
FalI	AAGNNNNNCTT	2 cut(s)	1244, 1276
FaqI	GGGAC	4 cut(s)	110, 341, 353, 608
FatI	CATG	9 cut(s)	11, 565, 605, 666, 978, 1023, 1183, 1222, 1318
FauI	CCCGC	2 cut(s)	138, 840
FblI	GTMKAC	1 cut(s)	1257
FokI	GGATG	1 cut(s)	312
FriOI	GRGCYC	1 cut(s)	829
FspBI	CTAG	3 cut(s)	741, 918, 1146
GlaI	GCGC	2 cut(s)	76, 186
GsaI	CCCAGC	1 cut(s)	195
GsuI	CTGGAG	1 cut(s)	929
HaeII	RGCGCY	1 cut(s)	78
HaeIII	GGCC	4 cut(s)	288, 675, 1094, 1235
HapII	CCGG	3 cut(s)	81, 173, 1298
HgaI	GACGC	1 cut(s)	515
HhaI	GCGC	2 cut(s)	77, 187
Hin1II	CATG	9 cut(s)	15, 569, 609, 670, 982, 1027, 1187, 1226, 1322
Hin6I	GCGC	2 cut(s)	75, 185
HinP1I	GCGC	2 cut(s)	75, 185
HinfI	GANTC	2 cut(s)	663, 1187
HpaII	CCGG	3 cut(s)	81, 173, 1298
HphI	GGTGA	3 cut(s)	467, 515, 1196
Hpy166II	GTNNAC	5 cut(s)	117, 352, 701, 1244, 1258
Hpy188I	TCNGA	5 cut(s)	160, 528, 803, 1099, 1192
Hpy188III	TCNNGA	3 cut(s)	593, 667, 1184
Hpy8I	GTNNAC	5 cut(s)	117, 352, 701, 1244, 1258
Hpy99I	CGWCG	1 cut(s)	112
HpyAV	CCTTC	5 cut(s)	162, 664, 1128, 1226, 1246
HpyCH4III	ACNGT	4 cut(s)	146, 251, 332, 407
HpyCH4IV	ACGT	1 cut(s)	123
HpyCH4V	TGCA	9 cut(s)	29, 38, 488, 534, 559, 931, 1109, 1222, 1226
HpyF3I	CTNAG	4 cut(s)	42, 774, 1261, 1270
HpySE526I	ACGT	1 cut(s)	123
Hsp92II	CATG	9 cut(s)	15, 569, 609, 670, 982, 1027, 1187, 1226, 1322
HspAI	GCGC	2 cut(s)	75, 185
KspI	CCGCGG	1 cut(s)	292
Kzo9I	GATC	4 cut(s)	160, 199, 218, 964
LmnI	GCTCC	6 cut(s)	94, 109, 175, 745, 824, 832
Lsp1109I	GCAGC	6 cut(s)	13, 50, 64, 571, 622, 831
LweI	GCATC	2 cut(s)	142, 412
MabI	ACCWGGT	1 cut(s)	1033
MaeI	CTAG	3 cut(s)	741, 918, 1146
MaeII	ACGT	1 cut(s)	123
MaeIII	GTNAC	4 cut(s)	140, 455, 503, 1202
MalI	GATC	4 cut(s)	162, 201, 220, 966
MboI	GATC	4 cut(s)	160, 199, 218, 964
MboII	GAAGA	5 cut(s)	54, 374, 443, 744, 903
MflI	RGATCY	2 cut(s)	160, 218
MhlI	GDGCHC	4 cut(s)	91, 106, 613, 829
MluCI	AATT	7 cut(s)	31, 415, 779, 831, 1005, 1175, 1351
MmeI	TCCRAC	2 cut(s)	1111, 1189
MroXI	GAANNNNTTC	2 cut(s)	435, 1179
MseI	TTAA	4 cut(s)	414, 513, 1280, 1350
MslI	CAYNNNNRTG	1 cut(s)	440
MspA1I	CMGCKG	5 cut(s)	41, 291, 562, 635, 844
MspI	CCGG	3 cut(s)	81, 173, 1298
MspR9I	CCNGG	3 cut(s)	888, 1035, 1299
Mva1269I	GAATGC	1 cut(s)	975
MvaI	CCWGG	2 cut(s)	888, 1035
MvnI	CGCG	2 cut(s)	112, 291
NciI	CCSGG	1 cut(s)	1299
NdeII	GATC	4 cut(s)	160, 199, 218, 964
NlaIII	CATG	9 cut(s)	15, 569, 609, 670, 982, 1027, 1187, 1226, 1322
NlaIV	GGNNCC	2 cut(s)	162, 329
NmuCI	GTSAC	3 cut(s)	455, 503, 1202
NotI	GCGGCCGC	1 cut(s)	286
NspI	RCATGY	4 cut(s)	569, 609, 1027, 1226
PaeI	GCATGC	2 cut(s)	569, 1226
PagI	TCATGA	2 cut(s)	666, 1183
PaqCI	CACCTGC	1 cut(s)	175
PctI	GAATGC	1 cut(s)	975
PdmI	GAANNNNTTC	2 cut(s)	435, 1179
PfeI	GAWTC	2 cut(s)	663, 1187
PflMI	CCANNNNNTGG	1 cut(s)	1171
PfoI	TCCNGGA	1 cut(s)	886
PshAI	GACNNNNGTC	1 cut(s)	249
PshBI	ATTAAT	1 cut(s)	414
Psp124BI	GAGCTC	1 cut(s)	829
Psp6I	CCWGG	2 cut(s)	886, 1033
PspFI	CCCAGC	1 cut(s)	191
PspGI	CCWGG	2 cut(s)	886, 1033
PspN4I	GGNNCC	2 cut(s)	162, 329
PspPI	GGNCC	6 cut(s)	114, 328, 673, 1213, 1233, 1295
PstI	CTGCAG	1 cut(s)	40
PstNI	CAGNNNCTG	1 cut(s)	1090
PsuI	RGATCY	2 cut(s)	160, 218
PvuII	CAGCTG	3 cut(s)	41, 635, 844
RsaI	GTAC	3 cut(s)	1115, 1150, 1243
RsaNI	GTAC	3 cut(s)	1114, 1149, 1242
RseI	CAYNNNNRTG	1 cut(s)	440
SacI	GAGCTC	1 cut(s)	829
SacII	CCGCGG	1 cut(s)	292
SaqAI	TTAA	4 cut(s)	414, 513, 1280, 1350
Sau3AI	GATC	4 cut(s)	160, 199, 218, 964
Sau96I	GGNCC	6 cut(s)	114, 328, 673, 1213, 1233, 1295
ScaI	AGTACT	1 cut(s)	1150
ScrFI	CCNGG	3 cut(s)	888, 1035, 1299
SduI	GDGCHC	4 cut(s)	91, 106, 613, 829
SexAI	ACCWGGT	1 cut(s)	1033
SfaNI	GCATC	2 cut(s)	142, 412
SfcI	CTRYAG	1 cut(s)	36
Sfr303I	CCGCGG	1 cut(s)	292
SgrBI	CCGCGG	1 cut(s)	292
SinI	GGWCC	4 cut(s)	114, 328, 1213, 1295
SmiMI	CAYNNNNRTG	1 cut(s)	440
SphI	GCATGC	2 cut(s)	569, 1226
Sse9I	AATT	7 cut(s)	31, 415, 779, 831, 1005, 1175, 1351
SspI	AATATT	2 cut(s)	523, 937
SspMI	CTAG	3 cut(s)	741, 918, 1146
SstI	GAGCTC	1 cut(s)	829
StyD4I	CCNGG	3 cut(s)	886, 1033, 1297
StyI	CCWWGG	1 cut(s)	583
TaaI	ACNGT	4 cut(s)	146, 251, 332, 407
TaiI	ACGT	1 cut(s)	126
TaqI	TCGA	2 cut(s)	202, 967
TaqII	GACCGA	1 cut(s)	243
TasI	AATT	7 cut(s)	31, 415, 779, 831, 1005, 1175, 1351
TatI	WGTACW	2 cut(s)	1113, 1148
TauI	GCSGC	6 cut(s)	279, 282, 285, 288, 291, 565
TfiI	GAWTC	2 cut(s)	663, 1187
Tru1I	TTAA	4 cut(s)	414, 513, 1280, 1350
Tru9I	TTAA	4 cut(s)	414, 513, 1280, 1350
TscAI	CASTG	3 cut(s)	100, 412, 1066
TseFI	GTSAC	3 cut(s)	455, 503, 1202
TseI	GCWGC	6 cut(s)	26, 38, 77, 559, 635, 844
Tsp45I	GTSAC	3 cut(s)	455, 503, 1202
TspDTI	ATGAA	7 cut(s)	144, 444, 683, 774, 824, 1172, 1200
TspGWI	ACGGA	1 cut(s)	96
TspRI	CASTG	3 cut(s)	100, 412, 1066
Van91I	CCANNNNNTGG	1 cut(s)	1171
VpaK11BI	GGWCC	4 cut(s)	114, 328, 1213, 1295
VspI	ATTAAT	1 cut(s)	414
XagI	CCTNNNNNAGG	2 cut(s)	956, 1032
XapI	RAATTY	3 cut(s)	31, 779, 1175
XceI	RCATGY	4 cut(s)	569, 609, 1027, 1226
XmiI	GTMKAC	1 cut(s)	1257
XmnI	GAANNNNTTC	2 cut(s)	435, 1179
XspI	CTAG	3 cut(s)	741, 918, 1146
ZrmI	AGTACT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.