Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Forward (+)

15141772 .. 15146368

Gene Structure 4597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g21570.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGAGGTCATGGGCAGATTCTGTAGGTAATGATGGAGACAATGCAGACGCTGGTTCGTCTGAAAATAACAACTCATCTCGTCCTTCTGACAATAAAAGCTCATCGCGCCCATCGGATAATAGCAGCTCATCTCGTCCTGCACGGTCAACTTATGTCCCACCACATCTTCGTAATAGGCCTCCGTCTGCTGATTCTCCAGCTCAGACTACCCTGCCACCAGCCAATGTAGGTTATAATGGGCCTGCAGCTGGGTCCGCCTGGGGTGGTGGTGGTTTTAGGCCTGATGTTGGCCGCGGGGGATATGTAGGTGGTGGTGGTGGTCGAGGTGGTGGTGGTGGTTGGAACAATCGAAGTGGGGGGTGGGACCGTGGGAGGGAGAGGGAGGTAAATCCCTTTGGTGATGAAGATTACTCAGAAGAGGCATTTGAGAAAGAAAACACAGGCATCAACTTTGATGCTTATGAGGATATCCCAGTCGAAACTAGTGGATCTGATGTGCCACCACCTGTGAATACTTTTGCAGAGATAGATCTAGGGGAGGCATTGAATTTAAATATTAGGAGATGCAAGTATGTGAGGCCAACTCCTGTTCAGCGTCATGCAATACCGATCTCACTTGGAGGACGAGATTTGATGGCCTGTGCTCAGACAGGTTCTGGCAAGACAGCTGCTTTCTGCTTTCCAATTATTAGTGGGATCATGCTGGGGCAGTATGCTCAGAGACCTCGTGGAGCACGTACTGTGTATCCTCTCGCTCTTATTCTCTCCCCTACTAGAGAACTCTCATGTCAGATACATGAAGAAACTAGAAAGTTTGCTTATCAAACTGGTGTCAAGGTGGTAGTTGCTTATGGAGGAGCGCCAATAAACCAACAGTTGAGAGAGCTTGAAAGAGGAGTAGATATTCTTGTGGCAACTCCGGGTCGATTGGTAGATCTGCTTGAGAGAGCTAGAGTATCATTGCAGATGATACGATATTTGGCTCTCGATGAGGCTGATCGGATGCTGGACATGGGTTTTGAGCCTCAAATTAGGAAAATAGTGCAACAGATGGACATGCCTCCACCAGGTTTGAGACAGACCATGCTATTCAGTGCAACCTTTCCAAAGGAGATACAGAGACTGGCATCGGATTTTCTGGCAAACTATATATTTTTGGCTGTTGGAAGGGTTGGCTCAAGTACTGATTTAATTGTTCAAAGAGTTGAATTCGTTCATGAATCTGATAAGAGAAGTCATCTAATGGACCTCCTTCATGCACAAAGGGAGAATGGAACTCACGGCAAGCAAGCTTTGACATTAGTATTCGTGGAAACAAAGAAGGGAGCAGACGCACTGGAACACTGGTTGTGTGTCAATGGGTTTCCTGCAACTACTATTCATGGTGACAGAACACAACAGGAAAGAGAACAGGCACTGAGATCATTTAAGAGTGGACACACACCAATTTTAGTGGCAACAGATGTGGCAGCACGTGGTCTGGATATTCCCCACGTAGCTCACGTGGTTAATTTTGATCTTCCAAATGACATTGATGATTATGTTCACCGGATAGGAAGGACAGGGCGAGCAGGAAAATCAGGACTAGCAACGGCATTCTTTAACGAGAATAACCTTTCAATGGCAAAACCATTAGCTGATCTTATGCAAGAAGCAAATCAGGAAGTACCTGCTTGGCTTACTCGATACGCATCGAGGGCTTCTTTTGGTGGTGGTAAGAACCGGCGATCTGGGGGAGGTCGTTTTGGTGGTCGTGACTTCAGAAGGGAGAATTCTTTCAACAGGGGTTTAGATTCCTATGGAGGGGGAAACAATGGCAGTGGTGGATATGGCGGTGGTGGATATAGCGGCGGCGGCTACGGAGGTGGGGGTTATGGTGGTGGGGGATATGGTAGTGGGGGTTATGGTGGCGGTAATGGGGGCGGTACTGGTCCCAGTGCTTGGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005777 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042579 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

650

Amino Acids

69.45

Weight (kDa)

7.23

Isoelectric Point (pI)

43.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	195 - 374	5.3e-48	DEAD/DEAH box helicase
Helicase_C	PF00271	410 - 525	1.7e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	234
Acc36I	ACCTGC	1 cut(s)	1678
AccB7I	CCANNNNNTGG	1 cut(s)	1941
AccII	CGCG	2 cut(s)	106, 294
AciI	CCGC	9 cut(s)	255, 292, 294, 1833, 1848, 1851, 1854, 1911, 1923
AclWI	GGATC	2 cut(s)	496, 704
AcoI	YGGCCR	1 cut(s)	289
AcsI	RAATTY	3 cut(s)	547, 1208, 1771
AcuI	CTGAAG	1 cut(s)	1744
AcvI	CACGTG	2 cut(s)	1475, 1504
AfaI	GTAC	4 cut(s)	739, 1183, 1668, 1927
AfiI	CCNNNNNNNGG	7 cut(s)	248, 287, 373, 1067, 1621, 1803, 1941
AgsI	TTSAA	6 cut(s)	547, 890, 1199, 1208, 1620, 1780
AhlI	ACTAGT	1 cut(s)	482
AjnI	CCWGG	2 cut(s)	257, 1066
Alw21I	GWGCWC	2 cut(s)	646, 736
Alw26I	GTCTC	4 cut(s)	30, 715, 1069, 1114
AlwI	GGATC	2 cut(s)	496, 704
AlwNI	CAGNNNCTG	5 cut(s)	20, 50, 656, 1123, 1417
AoxI	GGCC	6 cut(s)	176, 239, 278, 289, 578, 636
ApeKI	GCWGC	4 cut(s)	123, 245, 668, 1469
ApoI	RAATTY	3 cut(s)	547, 1208, 1771
ArsI	GACNNNNNNTTYG	2 cut(s)	1001, 1033
Asp700I	GAANNNNTTC	2 cut(s)	1212, 1775
AspLEI	GCGC	2 cut(s)	108, 862
AspS9I	GGNCC	5 cut(s)	239, 252, 364, 1246, 1931
AsuC2I	CCSGG	1 cut(s)	921
AsuHPI	GGTGA	3 cut(s)	410, 1397, 1538
AvaII	GGWCC	4 cut(s)	252, 364, 1246, 1931
BauI	CACGAG	1 cut(s)	726
BbrPI	CACGTG	2 cut(s)	1475, 1504
Bbv12I	GWGCWC	2 cut(s)	646, 736
BbvI	GCAGC	4 cut(s)	135, 257, 655, 1481
BccI	CCATC	4 cut(s)	26, 118, 628, 1045
BceAI	ACGGC	2 cut(s)	1297, 1608
BciT130I	CCWGG	2 cut(s)	259, 1068
BciVI	GTATCC	1 cut(s)	756
BcnI	CCSGG	1 cut(s)	921
BcoDI	GTCTC	4 cut(s)	30, 715, 1069, 1114
BcuI	ACTAGT	1 cut(s)	482
BfaI	CTAG	7 cut(s)	483, 533, 774, 807, 951, 1586, 1948
BfmI	CTRYAG	2 cut(s)	21, 243
BfoI	RGCGCY	1 cut(s)	863
BfuAI	ACCTGC	1 cut(s)	1678
BfuI	GTATCC	1 cut(s)	756
BglII	AGATCT	2 cut(s)	529, 934
BisI	GCNGC	8 cut(s)	124, 246, 292, 669, 1470, 1849, 1852, 1855
BlsI	GCNGC	8 cut(s)	125, 247, 293, 670, 1471, 1850, 1853, 1856
BmcAI	AGTACT	1 cut(s)	1183
Bme1390I	CCNGG	3 cut(s)	259, 921, 1068
Bme18I	GGWCC	4 cut(s)	252, 364, 1246, 1931
BmgT120I	GGNCC	5 cut(s)	239, 252, 364, 1246, 1931
BmiI	GGNNCC	3 cut(s)	253, 365, 1933
BmrFI	CCNGG	3 cut(s)	259, 921, 1068
BmrI	ACTGGG	2 cut(s)	467, 1929
BmsI	GCATC	6 cut(s)	445, 453, 554, 993, 1136, 1700
BmuI	ACTGGG	2 cut(s)	467, 1929
BplI	GAGNNNNNCTC	2 cut(s)	568, 600
BpmI	CTGGAG	1 cut(s)	180
BpuEI	CTTGAG	2 cut(s)	962, 1162
BpuMI	CCSGG	1 cut(s)	921
BsaAI	YACGTR	4 cut(s)	737, 1475, 1495, 1504
BsaBI	GATNNNNATC	1 cut(s)	1690
BsaI	GGTCTC	1 cut(s)	715
BsaJI	CCNNGG	3 cut(s)	258, 292, 367
BsaWI	WCCGGW	1 cut(s)	1548
Bsc4I	CCNNNNNNNGG	7 cut(s)	248, 287, 373, 1067, 1621, 1803, 1941
Bse118I	RCCGGY	1 cut(s)	1722
Bse1I	ACTGG	7 cut(s)	473, 832, 1128, 1341, 1349, 1933, 1935
Bse3DI	GCAATG	1 cut(s)	959
Bse8I	GATNNNNATC	1 cut(s)	1690
BseBI	CCWGG	2 cut(s)	259, 1068
BseDI	CCNNGG	3 cut(s)	258, 292, 367
BseGI	GGATG	1 cut(s)	1008
BseJI	GATNNNNATC	1 cut(s)	1690
BseLI	CCNNNNNNNGG	7 cut(s)	248, 287, 373, 1067, 1621, 1803, 1941
BseMI	GCAATG	1 cut(s)	959
BseMII	CTCAG	5 cut(s)	215, 426, 659, 731, 1409
BseNI	ACTGG	7 cut(s)	473, 832, 1128, 1341, 1349, 1933, 1935
BseRI	GAGGAG	2 cut(s)	870, 909
BseXI	GCAGC	4 cut(s)	135, 257, 655, 1481
BseYI	CCCAGC	2 cut(s)	248, 703
BsgI	GTGCAG	1 cut(s)	123
Bsh1236I	CGCG	2 cut(s)	106, 294
BshFI	GGCC	6 cut(s)	178, 241, 280, 291, 580, 638
BsiHKAI	GWGCWC	2 cut(s)	646, 736
BsiSI	CCGG	3 cut(s)	920, 1549, 1723
BslFI	GGGAC	3 cut(s)	140, 377, 1917
BslI	CCNNNNNNNGG	7 cut(s)	248, 287, 373, 1067, 1621, 1803, 1941
BsmAI	GTCTC	4 cut(s)	30, 715, 1069, 1114
BsmFI	GGGAC	3 cut(s)	140, 377, 1917
BsmI	GAATGC	1 cut(s)	1595
BsnI	GGCC	6 cut(s)	178, 241, 280, 291, 580, 638
Bso31I	GGTCTC	1 cut(s)	715
Bsp1286I	GDGCHC	2 cut(s)	646, 736
BspACI	CCGC	9 cut(s)	255, 292, 294, 1833, 1848, 1851, 1854, 1911, 1923
BspANI	GGCC	6 cut(s)	178, 241, 280, 291, 580, 638
BspCNI	CTCAG	5 cut(s)	214, 425, 658, 730, 1410
BspFNI	CGCG	2 cut(s)	106, 294
BspHI	TCATGA	1 cut(s)	1216
BspLI	GGNNCC	3 cut(s)	253, 365, 1933
BspMAI	CTGCAG	1 cut(s)	247
BspMI	ACCTGC	1 cut(s)	1678
BspPI	GGATC	2 cut(s)	496, 704
BspTNI	GGTCTC	1 cut(s)	715
BsrDI	GCAATG	1 cut(s)	959
BsrFI	RCCGGY	1 cut(s)	1722
BsrI	ACTGG	7 cut(s)	473, 832, 1128, 1341, 1349, 1933, 1935
BssAI	RCCGGY	1 cut(s)	1722
BssECI	CCNNGG	3 cut(s)	258, 292, 367
BssSI	CACGAG	1 cut(s)	726
Bst2BI	CACGAG	1 cut(s)	726
Bst2UI	CCWGG	2 cut(s)	259, 1068
Bst4CI	ACNGT	4 cut(s)	144, 368, 742, 876
Bst6I	CTCTTC	1 cut(s)	411
BstBAI	YACGTR	4 cut(s)	737, 1475, 1495, 1504
BstC8I	GCNNGC	4 cut(s)	243, 1286, 1290, 1569
BstDEI	CTNAG	5 cut(s)	201, 412, 645, 717, 1418
BstDSI	CCRYGG	2 cut(s)	292, 367
BstENI	CCTNNNNNAGG	1 cut(s)	1065
BstF5I	GGATG	1 cut(s)	1008
BstFNI	CGCG	2 cut(s)	106, 294
BstH2I	RGCGCY	1 cut(s)	863
BstHHI	GCGC	2 cut(s)	108, 862
BstMAI	GTCTC	4 cut(s)	30, 715, 1069, 1114
BstMWI	GCNNNNNNNGC	4 cut(s)	105, 254, 1697, 1854
BstNI	CCWGG	2 cut(s)	259, 1068
BstNSI	RCATGY	1 cut(s)	1060
BstSCI	CCNGG	3 cut(s)	257, 919, 1066
BstSFI	CTRYAG	2 cut(s)	21, 243
BstUI	CGCG	2 cut(s)	106, 294
BstV1I	GCAGC	4 cut(s)	135, 257, 655, 1481
BstX2I	RGATCY	3 cut(s)	488, 529, 934
BstYI	RGATCY	3 cut(s)	488, 529, 934
BsuI	GTATCC	1 cut(s)	756
BsuRI	GGCC	6 cut(s)	178, 241, 280, 291, 580, 638
BtgI	CCRYGG	2 cut(s)	292, 367
BtgZI	GCGATG	1 cut(s)	87
BtsCI	GGATG	1 cut(s)	1008
BtsI	GCAGTG	1 cut(s)	1825
BtsIMutI	CAGTG	6 cut(s)	1099, 1334, 1342, 1415, 1825, 1942
BveI	ACCTGC	1 cut(s)	1678
Cac8I	GCNNGC	4 cut(s)	243, 1286, 1290, 1569
CaiI	CAGNNNCTG	5 cut(s)	20, 50, 656, 1123, 1417
CciI	TCATGA	1 cut(s)	1216
CfoI	GCGC	2 cut(s)	108, 862
Cfr10I	RCCGGY	1 cut(s)	1722
Cfr13I	GGNCC	5 cut(s)	239, 252, 364, 1246, 1931
Cfr42I	CCGCGG	1 cut(s)	295
CseI	GACGC	3 cut(s)	56, 584, 1340
CsiI	ACCWGGT	1 cut(s)	1066
Csp6I	GTAC	4 cut(s)	738, 1182, 1667, 1926
CviQI	GTAC	4 cut(s)	738, 1182, 1667, 1926
DdeI	CTNAG	5 cut(s)	201, 412, 645, 717, 1418
DraI	TTTAAA	1 cut(s)	552
EaeI	YGGCCR	1 cut(s)	289
Eam1104I	CTCTTC	1 cut(s)	411
EarI	CTCTTC	1 cut(s)	411
EciI	GGCGGA	1 cut(s)	244
Eco147I	AGGCCT	2 cut(s)	178, 280
Eco31I	GGTCTC	1 cut(s)	715
Eco32I	GATATC	1 cut(s)	469
Eco47I	GGWCC	4 cut(s)	252, 364, 1246, 1931
Eco57I	CTGAAG	1 cut(s)	1744
Eco72I	CACGTG	2 cut(s)	1475, 1504
EcoNI	CCTNNNNNAGG	1 cut(s)	1065
EcoRI	GAATTC	2 cut(s)	1208, 1771
EcoRII	CCWGG	2 cut(s)	257, 1066
EcoRV	GATATC	1 cut(s)	469
FaqI	GGGAC	3 cut(s)	140, 377, 1917
FauI	CCCGC	1 cut(s)	287
Fnu4HI	GCNGC	8 cut(s)	124, 246, 292, 669, 1470, 1849, 1852, 1855
FokI	GGATG	1 cut(s)	1015
Fsp4HI	GCNGC	8 cut(s)	124, 246, 292, 669, 1470, 1849, 1852, 1855
FspBI	CTAG	7 cut(s)	483, 533, 774, 807, 951, 1586, 1948
GlaI	GCGC	2 cut(s)	107, 861
GluI	GCNGC	8 cut(s)	124, 246, 292, 669, 1470, 1849, 1852, 1855
GsaI	CCCAGC	2 cut(s)	252, 707
GsuI	CTGGAG	1 cut(s)	180
HaeII	RGCGCY	1 cut(s)	863
HaeIII	GGCC	6 cut(s)	178, 241, 280, 291, 580, 638
HapII	CCGG	3 cut(s)	920, 1549, 1723
HgaI	GACGC	3 cut(s)	56, 584, 1340
HhaI	GCGC	2 cut(s)	108, 862
Hin6I	GCGC	2 cut(s)	106, 860
HinP1I	GCGC	2 cut(s)	106, 860
HincII	GTYRAC	1 cut(s)	147
HindII	GTYRAC	1 cut(s)	147
HindIII	AAGCTT	1 cut(s)	1290
HinfI	GANTC	4 cut(s)	17, 191, 1220, 1793
HpaII	CCGG	3 cut(s)	920, 1549, 1723
HphI	GGTGA	3 cut(s)	410, 1397, 1538
Hpy166II	GTNNAC	3 cut(s)	147, 1436, 1546
Hpy188III	TCNNGA	6 cut(s)	986, 1217, 1481, 1581, 1661, 1754
Hpy8I	GTNNAC	3 cut(s)	147, 1436, 1546
HpyAV	CCTTC	6 cut(s)	93, 1161, 1262, 1315, 1551, 1758
HpyCH4III	ACNGT	4 cut(s)	144, 368, 742, 876
HpyCH4IV	ACGT	4 cut(s)	736, 1474, 1494, 1503
HpyF10VI	GCNNNNNNNGC	4 cut(s)	105, 254, 1697, 1854
HpyF3I	CTNAG	5 cut(s)	201, 412, 645, 717, 1418
HpySE526I	ACGT	4 cut(s)	736, 1474, 1494, 1503
HspAI	GCGC	2 cut(s)	106, 860
KspI	CCGCGG	1 cut(s)	295
LmnI	GCTCC	3 cut(s)	731, 857, 1325
Lsp1109I	GCAGC	4 cut(s)	135, 257, 655, 1481
LweI	GCATC	6 cut(s)	445, 453, 554, 993, 1136, 1700
MabI	ACCWGGT	1 cut(s)	1066
MaeI	CTAG	7 cut(s)	483, 533, 774, 807, 951, 1586, 1948
MaeII	ACGT	4 cut(s)	736, 1474, 1494, 1503
MaeIII	GTNAC	2 cut(s)	1385, 1754
MboII	GAAGA	5 cut(s)	158, 416, 428, 812, 1511
MflI	RGATCY	3 cut(s)	488, 529, 934
MhlI	GDGCHC	2 cut(s)	646, 736
MluCI	AATT	8 cut(s)	547, 684, 1029, 1191, 1208, 1446, 1510, 1771
MmeI	TCCRAC	2 cut(s)	320, 1144
MroXI	GAANNNNTTC	2 cut(s)	1212, 1775
MseI	TTAA	5 cut(s)	551, 1190, 1428, 1509, 1602
MspA1I	CMGCKG	3 cut(s)	248, 294, 668
MspI	CCGG	3 cut(s)	920, 1549, 1723
MspR9I	CCNGG	3 cut(s)	259, 921, 1068
Mva1269I	GAATGC	1 cut(s)	1595
MvaI	CCWGG	2 cut(s)	259, 1068
MvnI	CGCG	2 cut(s)	106, 294
MwoI	GCNNNNNNNGC	4 cut(s)	105, 254, 1697, 1854
NciI	CCSGG	1 cut(s)	921
NlaIV	GGNNCC	3 cut(s)	253, 365, 1933
NmuCI	GTSAC	2 cut(s)	1385, 1754
NspI	RCATGY	1 cut(s)	1060
PagI	TCATGA	1 cut(s)	1216
PceI	AGGCCT	2 cut(s)	178, 280
PcsI	WCGNNNNNNNCGW	2 cut(s)	733, 1500
PctI	GAATGC	1 cut(s)	1595
PdmI	GAANNNNTTC	2 cut(s)	1212, 1775
PfeI	GAWTC	4 cut(s)	17, 191, 1220, 1793
PflMI	CCANNNNNTGG	1 cut(s)	1941
PkrI	GCNGC	8 cut(s)	125, 247, 293, 670, 1471, 1850, 1853, 1856
PmaCI	CACGTG	2 cut(s)	1475, 1504
PmlI	CACGTG	2 cut(s)	1475, 1504
Ppu21I	YACGTR	4 cut(s)	737, 1475, 1495, 1504
PsiI	TTATAA	1 cut(s)	234
Psp6I	CCWGG	2 cut(s)	257, 1066
PspCI	CACGTG	2 cut(s)	1475, 1504
PspFI	CCCAGC	2 cut(s)	248, 703
PspGI	CCWGG	2 cut(s)	257, 1066
PspN4I	GGNNCC	3 cut(s)	253, 365, 1933
PspPI	GGNCC	5 cut(s)	239, 252, 364, 1246, 1931
PstI	CTGCAG	1 cut(s)	247
PstNI	CAGNNNCTG	5 cut(s)	20, 50, 656, 1123, 1417
PsuI	RGATCY	3 cut(s)	488, 529, 934
PvuII	CAGCTG	2 cut(s)	248, 668
RsaI	GTAC	4 cut(s)	739, 1183, 1668, 1927
RsaNI	GTAC	4 cut(s)	738, 1182, 1667, 1926
SacII	CCGCGG	1 cut(s)	295
SaqAI	TTAA	5 cut(s)	551, 1190, 1428, 1509, 1602
SatI	GCNGC	8 cut(s)	124, 246, 292, 669, 1470, 1849, 1852, 1855
Sau96I	GGNCC	5 cut(s)	239, 252, 364, 1246, 1931
ScaI	AGTACT	1 cut(s)	1183
ScrFI	CCNGG	3 cut(s)	259, 921, 1068
SduI	GDGCHC	2 cut(s)	646, 736
SexAI	ACCWGGT	1 cut(s)	1066
SfaNI	GCATC	6 cut(s)	445, 453, 554, 993, 1136, 1700
SfcI	CTRYAG	2 cut(s)	21, 243
Sfr303I	CCGCGG	1 cut(s)	295
SgrBI	CCGCGG	1 cut(s)	295
SinI	GGWCC	4 cut(s)	252, 364, 1246, 1931
SmiI	ATTTAAAT	1 cut(s)	552
SmlI	CTYRAG	2 cut(s)	941, 1177
SmoI	CTYRAG	2 cut(s)	941, 1177
SpeI	ACTAGT	1 cut(s)	482
Sse9I	AATT	8 cut(s)	547, 684, 1029, 1191, 1208, 1446, 1510, 1771
SseBI	AGGCCT	2 cut(s)	178, 280
SsiI	CCGC	9 cut(s)	255, 292, 294, 1833, 1848, 1851, 1854, 1911, 1923
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	7 cut(s)	483, 533, 774, 807, 951, 1586, 1948
StuI	AGGCCT	2 cut(s)	178, 280
StyD4I	CCNGG	3 cut(s)	257, 919, 1066
SwaI	ATTTAAAT	1 cut(s)	552
TaaI	ACNGT	4 cut(s)	144, 368, 742, 876
TaiI	ACGT	4 cut(s)	739, 1477, 1497, 1506
TaqI	TCGA	7 cut(s)	322, 349, 477, 925, 987, 1684, 1694
TasI	AATT	8 cut(s)	547, 684, 1029, 1191, 1208, 1446, 1510, 1771
TatI	WGTACW	1 cut(s)	1181
TauI	GCSGC	4 cut(s)	294, 1851, 1854, 1857
TfiI	GAWTC	4 cut(s)	17, 191, 1220, 1793
Tru1I	TTAA	5 cut(s)	551, 1190, 1428, 1509, 1602
Tru9I	TTAA	5 cut(s)	551, 1190, 1428, 1509, 1602
TscAI	CASTG	6 cut(s)	1099, 1341, 1349, 1422, 1825, 1942
TseFI	GTSAC	2 cut(s)	1385, 1754
TseI	GCWGC	4 cut(s)	123, 245, 668, 1469
Tsp45I	GTSAC	2 cut(s)	1385, 1754
TspDTI	ATGAA	6 cut(s)	417, 813, 1205, 1233, 1244, 1370
TspGWI	ACGGA	2 cut(s)	171, 1875
TspRI	CASTG	6 cut(s)	1099, 1341, 1349, 1422, 1825, 1942
Van91I	CCANNNNNTGG	1 cut(s)	1941
VpaK11BI	GGWCC	4 cut(s)	252, 364, 1246, 1931
XagI	CCTNNNNNAGG	1 cut(s)	1065
XapI	RAATTY	3 cut(s)	547, 1208, 1771
XceI	RCATGY	1 cut(s)	1060
XmnI	GAANNNNTTC	2 cut(s)	1212, 1775
XspI	CTAG	7 cut(s)	483, 533, 774, 807, 951, 1586, 1948
ZrmI	AGTACT	1 cut(s)	1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.