Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000684

Physical Location & Seq

Genomic Coordinates Reverse (-)

37563621 .. 37569234

Gene Structure 5614 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g45200.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGCGAGCTTCATGGGCAGATTTAGCTGCAAATTCTGCAGCTGAGAATGTAGGTTCTGGATCTTCTGCTAACAGCGCTGCCGGTGGCGCTCCCGCTGCTGGGGCTGCGTCTCGGTCCACCTATGTCCCGCCGCACCTTCGGAACCGTCCTCCGCCTTCGTTGGATGCACCTGCTCCGGCATTTAATGCACCTGCGGGGAATGATCGTGGCGGGTATGGTGGTGGATCTCGTTGGGGTGGTGGTGGTGGTCGGGGGTATGGAGGGAGTGCTGGTGGTGGAGGTGGAGGCCGCAGTGGTTGGGGTGGAAGCCGCGGTGGTTGGGGTGGCGGGAGGGACAGGGAAGTGAATCCCTTTGAAGATGATGACGAAACAGAGGTGCCGTTTAGTGAGCAGGAGAACAGTGGCATTAACTTTGATGCCTATGAAGACATTCCTGTTGAGACTAGTGGTGACAATGTTCCACCCCCTGTGAATACATTTGCAGAGATTGACTTGGGTGACGCACTTAATAAAAATATTCAGAGGTGCAAATATGTGAAACCGACACCTGTGCAGCGGCACGCCATTCCGATCTCCCTTGCTGGTCGGGACTTGATGGCATGTGCCCAAACGGGTTCTGGAAAGACAGCTGCTTTCTGTTTCCCTATCATTAGTGGAATTATGAAGGGACAACCTCCACAGAGACCGCCCCGTTCTCATACAGCCTGCCCACTTGCTCTCATTTTATCTCCTACTAGGGAGCTTTCTTCTCAAATACACGAGGAAGCTAAGAAATTTTCATATCAAACTGGTGTCAGAGCTGTTGTTGCTTATGGAGGAGCTCCAATTCATCAACAGCTGCGCGAACTGGAAAGAGGTGTTGATATTCTTGTGGCAACTCCTGGAAGATTGGTGGATTTGCTGGAAAGAGCTAGAGTCTCATTGCAGAATATTAGGTATTTAGCTCTTGATGAGGCTGATCGAATGCTGGACATGGGGTTTGAACCACAAATAAGGAAAATTGTGGAACAGATGGACATGCCTCCACCAGGTGTGCGACAAACTATGCTGTTCAGTGCCACTTTTCCTAAAGAAATACAGAGACTGGCCTCTGATTTTCTTGCAAAGTATATCTTTCTGGCTGTCGGAAGGGTGGGTTCTAGTACTGATTTGATTGTCCAACGAGTGGAATTTGTTCACGAGTCTGATAAAAGAAGTCACCTCATGGACCTTCTGCATGCTCAAAGGGCCAATGGTACACAGGGAAAGCAAGCTCTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCTGATTCCCTGGAACACTGGTTGTGTATGAACGGTTTTCCTGCGACTACTATTCATGGTGACAGAACACAGCAGGAAAGAGAACAAGCATTGAGGTCTTTTAAGAGCGGCAATACTCCAATTTTGGTGGCTACTGATGTTGCTGCACGTGGGCTTGATATTCCTCACGTTGCTCATGTTGTCAACTTTGATCTTCCAAATGACATTGATGATTATGTTCACCGCATTGGTCGTACTGGTCGAGCTGGGAAATCTGGTCTAGCTACTGCCTTTTTTAATGAGAACAATTCATCACTGGCCAAGTCTCTAGCAGATTTGATGACAGAATCAAATCAAGAAGTACCTGCTTGGTTGTCACGGTATGCAGCTCGATCTTCTTATGGTGGTGGGAGGAACCGCCGTTCTGGGGGAGGCCGGTTTGGTGGCCGTGACTTCCGAAGGGATTCCTATAGTGGTGGAGGAGGAGGTGGCGGATATGGCGGTTCTGGTGGGTATAATGCAGGAGGAGGATATGGTGGTTCTGGTGGTTATAGTGGAGGAGGAGGTTATGGTGGTCCTGGGGTAACCAGTGCATGGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04622 ko05161 ko05203 map04622 map05161 map05203

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

623

Amino Acids

65.65

Weight (kDa)

7.71

Isoelectric Point (pI)

48.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	182 - 252	5.2e-15	DEAD/DEAH box helicase
DEAD	PF00270	272 - 388	1.9e-29	DEAD/DEAH box helicase
Helicase_C	PF00271	424 - 539	9.9e-32	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42520 AT2G42520 AT2G42520 AT3G58510 AT3G58510 AT3G58510 AT3G58570
fragaria_vesca	FvH4_1g03520 FvH4_1g03520 FvH4_1g03520 FvH4_3g45200 FvH4_3g45200 FvH4_3g45200 FvH4_6g21570
malus_domestica	MD02G1034300.v1.1 MD03G1007400.v1.1 MD11G1010700.v1.1 MD12G1053000.v1.1 MD14G1051400.v1.1 MD15G1175000.v1.1
prunus_persica	Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.6G007000_v2.0.a1 Prupe.7G084600_v2.0.a1 Prupe.7G240900_v2.0.a1
pyrus_communis	pycom02g02800 pycom03g00760 pycom11g00670 pycom12g04630 pycom14g04260 pycom15g15650
rosa_chinensis	RchiOBHm_Chr2g0088731 RchiOBHm_Chr2g0088781 RchiOBHm_Chr2g0088941 RchiOBHm_Chr3g0478811 RchiOBHm_Chr5g0082811
rosa_laevigata	RLG00000015980 RLG00000016349 RLG00000023623 RLG00000036991
rosa_multiflora	Rmu_co8138978.1_g000001 Rmu_co8475903.1_g000001 Rmu_sc0000965.1_g000010 Rmu_sc0001381.1_g000020 Rmu_sc0001519.1_g000001 Rmu_sc0005751.1_g000004 Rmu_sc0011683.1_g000004
rosa_roxburghii	Rroxscaffold_1G00001630 Rroxscaffold_2G00148710 Rroxscaffold_6G00403050
rosa_rugosa	Rorug01G0486600 Rorug03G0168400 Rorug05G0479900 Rorug05G0479900 Rorug05G0479900 Rorug05G0480000
rosa_samantha	Rh2AG041800 Rh2AG076200 Rh2BG040500 Rh2BG077600 Rh2CG041300 Rh2CG041900 Rh2CG079800 Rh2DG040900 Rh2DG074900 Rh3AG220200 Rh3BG252000 Rh3DG245100 Rh5AG530300 Rh5DG565600
rosa_wichuraiana	Rw2G003260 Rw2G006990 Rw3G019790 Rw5G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	178, 199
Acc36I	ACCTGC	3 cut(s)	178, 199, 1639
AccB1I	GGYRCC	1 cut(s)	376
AccB7I	CCANNNNNTGG	2 cut(s)	1165, 1860
AccBSI	CCGCTC	1 cut(s)	1395
AccII	CGCG	2 cut(s)	312, 843
AclWI	GGATC	2 cut(s)	67, 232
AcoI	YGGCCR	2 cut(s)	1584, 1711
AcsI	RAATTY	3 cut(s)	31, 773, 1169
AcvI	CACGTG	1 cut(s)	1436
AdeI	CACNNNGTG	1 cut(s)	1031
AfaI	GTAC	4 cut(s)	1144, 1237, 1522, 1629
AfeI	AGCGCT	1 cut(s)	76
AfiI	CCNNNNNNNGG	6 cut(s)	98, 99, 1028, 1165, 1693, 1860
AgsI	TTSAA	2 cut(s)	356, 983
AhlI	ACTAGT	1 cut(s)	443
AjnI	CCWGG	4 cut(s)	880, 1027, 1296, 1843
AloI	GAACNNNNNNTCC	2 cut(s)	1672, 1704
Alw21I	GWGCWC	1 cut(s)	823
Alw26I	GTCTC	7 cut(s)	114, 434, 676, 922, 1075, 1268, 1596
AlwI	GGATC	2 cut(s)	67, 232
AlwNI	CAGNNNCTG	1 cut(s)	1084
Aor51HI	AGCGCT	1 cut(s)	76
AoxI	GGCC	6 cut(s)	286, 1086, 1227, 1584, 1699, 1711
ApoI	RAATTY	3 cut(s)	31, 773, 1169
ArsI	GACNNNNNNTTYG	2 cut(s)	962, 994
Asp700I	GAANNNNTTC	3 cut(s)	429, 1173, 1729
AspLEI	GCGC	3 cut(s)	77, 89, 843
AspS9I	GGNCC	4 cut(s)	114, 1207, 1227, 1841
AsuHPI	GGTGA	5 cut(s)	461, 509, 1190, 1358, 1499
AvaII	GGWCC	3 cut(s)	114, 1207, 1841
BaeGI	GKGCMC	1 cut(s)	607
BalI	TGGCCA	1 cut(s)	1586
BanI	GGYRCC	1 cut(s)	376
BanII	GRGCYC	1 cut(s)	823
BauI	CACGAG	2 cut(s)	758, 1178
BbrPI	CACGTG	1 cut(s)	1436
BbsI	GAAGAC	1 cut(s)	432
Bbv12I	GWGCWC	1 cut(s)	823
BccI	CCATC	2 cut(s)	589, 1006
BceAI	ACGGC	3 cut(s)	364, 1671, 1698
BcgI	CGANNNNNNTGC	2 cut(s)	532, 566
BciT130I	CCWGG	4 cut(s)	882, 1029, 1298, 1845
BcoDI	GTCTC	7 cut(s)	114, 434, 676, 922, 1075, 1268, 1596
BcuI	ACTAGT	1 cut(s)	443
BfaI	CTAG	6 cut(s)	444, 735, 912, 1140, 1547, 1595
BfmI	CTRYAG	2 cut(s)	36, 1735
BfoI	RGCGCY	2 cut(s)	78, 90
BfuAI	ACCTGC	3 cut(s)	178, 199, 1639
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	4 cut(s)	882, 1029, 1298, 1845
Bme18I	GGWCC	3 cut(s)	114, 1207, 1841
BmgT120I	GGNCC	4 cut(s)	114, 1207, 1227, 1841
BmiI	GGNNCC	3 cut(s)	143, 378, 1682
BmrFI	CCNGG	4 cut(s)	882, 1029, 1298, 1845
BmsI	GCATC	2 cut(s)	154, 406
BpiI	GAAGAC	1 cut(s)	432
BsaAI	YACGTR	1 cut(s)	1436
BsaI	GGTCTC	1 cut(s)	676
BsaJI	CCNNGG	3 cut(s)	310, 1296, 1844
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	6 cut(s)	98, 99, 1028, 1165, 1693, 1860
Bse118I	RCCGGY	2 cut(s)	80, 1701
Bse1I	ACTGG	7 cut(s)	793, 852, 1089, 1310, 1528, 1587, 1854
Bse3DI	GCAATG	1 cut(s)	920
BseBI	CCWGG	4 cut(s)	882, 1029, 1298, 1845
BseDI	CCNNGG	3 cut(s)	310, 1296, 1844
BseGI	GGATG	1 cut(s)	169
BseLI	CCNNNNNNNGG	6 cut(s)	98, 99, 1028, 1165, 1693, 1860
BseMI	GCAATG	1 cut(s)	920
BseMII	CTCAG	1 cut(s)	33
BseNI	ACTGG	7 cut(s)	793, 852, 1089, 1310, 1528, 1587, 1854
BseRI	GAGGAG	6 cut(s)	831, 1761, 1764, 1806, 1839, 1842
BseSI	GKGCMC	1 cut(s)	607
BseYI	CCCAGC	2 cut(s)	98, 1532
BsgI	GTGCAG	2 cut(s)	572, 1416
Bsh1236I	CGCG	2 cut(s)	312, 843
BshFI	GGCC	6 cut(s)	288, 1088, 1229, 1586, 1701, 1713
BshNI	GGYRCC	1 cut(s)	376
BsiHKAI	GWGCWC	1 cut(s)	823
BsiSI	CCGG	3 cut(s)	81, 176, 1702
BslFI	GGGAC	4 cut(s)	110, 347, 602, 681
BslI	CCNNNNNNNGG	6 cut(s)	98, 99, 1028, 1165, 1693, 1860
BsmAI	GTCTC	7 cut(s)	114, 434, 676, 922, 1075, 1268, 1596
BsmBI	CGTCTC	1 cut(s)	114
BsmFI	GGGAC	4 cut(s)	110, 347, 602, 681
BsmI	GAATGC	1 cut(s)	969
BsnI	GGCC	6 cut(s)	288, 1088, 1229, 1586, 1701, 1713
Bso31I	GGTCTC	1 cut(s)	676
Bsp1286I	GDGCHC	2 cut(s)	607, 823
Bsp143I	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
BspANI	GGCC	6 cut(s)	288, 1088, 1229, 1586, 1701, 1713
BspCNI	CTCAG	1 cut(s)	34
BspFNI	CGCG	2 cut(s)	312, 843
BspLI	GGNNCC	3 cut(s)	143, 378, 1682
BspMAI	CTGCAG	1 cut(s)	40
BspMI	ACCTGC	3 cut(s)	178, 199, 1639
BspPI	GGATC	2 cut(s)	67, 232
BspT107I	GGYRCC	1 cut(s)	376
BspTNI	GGTCTC	1 cut(s)	676
BsrBI	CCGCTC	1 cut(s)	1395
BsrDI	GCAATG	1 cut(s)	920
BsrFI	RCCGGY	2 cut(s)	80, 1701
BsrI	ACTGG	7 cut(s)	793, 852, 1089, 1310, 1528, 1587, 1854
BssAI	RCCGGY	2 cut(s)	80, 1701
BssECI	CCNNGG	3 cut(s)	310, 1296, 1844
BssMI	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
BssSI	CACGAG	2 cut(s)	758, 1178
Bst2BI	CACGAG	2 cut(s)	758, 1178
Bst2UI	CCWGG	4 cut(s)	882, 1029, 1298, 1845
Bst4CI	ACNGT	4 cut(s)	146, 401, 1322, 1647
BstAPI	GCANNNNNTGC	2 cut(s)	35, 185
BstBAI	YACGTR	1 cut(s)	1436
BstC8I	GCNNGC	5 cut(s)	6, 561, 706, 1218, 1251
BstDEI	CTNAG	2 cut(s)	42, 768
BstDSI	CCRYGG	1 cut(s)	310
BstEII	GGTNACC	1 cut(s)	1849
BstENI	CCTNNNNNAGG	1 cut(s)	1026
BstF5I	GGATG	1 cut(s)	169
BstFNI	CGCG	2 cut(s)	312, 843
BstH2I	RGCGCY	2 cut(s)	78, 90
BstHHI	GCGC	3 cut(s)	77, 89, 843
BstKTI	GATC	7 cut(s)	62, 205, 227, 573, 961, 1480, 1661
BstMAI	GTCTC	7 cut(s)	114, 434, 676, 922, 1075, 1268, 1596
BstMBI	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
BstNI	CCWGG	4 cut(s)	882, 1029, 1298, 1845
BstNSI	RCATGY	3 cut(s)	603, 1021, 1220
BstPI	GGTNACC	1 cut(s)	1849
BstSCI	CCNGG	4 cut(s)	880, 1027, 1296, 1843
BstSFI	CTRYAG	2 cut(s)	36, 1735
BstSLI	GKGCMC	1 cut(s)	607
BstUI	CGCG	2 cut(s)	312, 843
BstV2I	GAAGAC	1 cut(s)	432
BstX2I	RGATCY	2 cut(s)	59, 224
BstYI	RGATCY	2 cut(s)	59, 224
BsuRI	GGCC	6 cut(s)	288, 1088, 1229, 1586, 1701, 1713
BtgI	CCRYGG	1 cut(s)	310
BtsCI	GGATG	1 cut(s)	169
BtsI	GCAGTG	1 cut(s)	298
BtsIMutI	CAGTG	6 cut(s)	298, 406, 1060, 1303, 1580, 1861
BveI	ACCTGC	3 cut(s)	178, 199, 1639
Cac8I	GCNNGC	5 cut(s)	6, 561, 706, 1218, 1251
CaiI	CAGNNNCTG	1 cut(s)	1084
CfoI	GCGC	3 cut(s)	77, 89, 843
Cfr10I	RCCGGY	2 cut(s)	80, 1701
Cfr13I	GGNCC	4 cut(s)	114, 1207, 1227, 1841
Cfr42I	CCGCGG	1 cut(s)	313
CseI	GACGC	2 cut(s)	96, 509
CsiI	ACCWGGT	1 cut(s)	1027
Csp6I	GTAC	4 cut(s)	1143, 1236, 1521, 1628
CspCI	CAANNNNNGTGG	2 cut(s)	1395, 1430
CviAII	CATG	9 cut(s)	12, 600, 973, 1018, 1204, 1217, 1343, 1463, 1860
CviQI	GTAC	4 cut(s)	1143, 1236, 1521, 1628
DdeI	CTNAG	2 cut(s)	42, 768
DpnI	GATC	7 cut(s)	61, 204, 226, 572, 960, 1479, 1660
DpnII	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
DraIII	CACNNNGTG	1 cut(s)	1031
EaeI	YGGCCR	2 cut(s)	1584, 1711
EciI	GGCGGA	2 cut(s)	141, 1773
Ecl136II	GAGCTC	1 cut(s)	821
Eco24I	GRGCYC	1 cut(s)	823
Eco31I	GGTCTC	1 cut(s)	676
Eco47I	GGWCC	3 cut(s)	114, 1207, 1841
Eco47III	AGCGCT	1 cut(s)	76
Eco53kI	GAGCTC	1 cut(s)	821
Eco72I	CACGTG	1 cut(s)	1436
Eco91I	GGTNACC	1 cut(s)	1849
EcoICRI	GAGCTC	1 cut(s)	821
EcoNI	CCTNNNNNAGG	1 cut(s)	1026
EcoO65I	GGTNACC	1 cut(s)	1849
EcoRII	CCWGG	4 cut(s)	880, 1027, 1296, 1843
EcoT38I	GRGCYC	1 cut(s)	823
Esp3I	CGTCTC	1 cut(s)	114
FaeI	CATG	9 cut(s)	15, 603, 976, 1021, 1207, 1220, 1346, 1466, 1863
FalI	AAGNNNNNCTT	2 cut(s)	1097, 1129
FaqI	GGGAC	4 cut(s)	110, 347, 602, 681
FatI	CATG	9 cut(s)	11, 599, 972, 1017, 1203, 1216, 1342, 1462, 1859
FauI	CCCGC	5 cut(s)	100, 135, 187, 203, 320
FokI	GGATG	1 cut(s)	176
FriOI	GRGCYC	1 cut(s)	823
FspBI	CTAG	6 cut(s)	444, 735, 912, 1140, 1547, 1595
GlaI	GCGC	3 cut(s)	76, 88, 842
GsaI	CCCAGC	2 cut(s)	102, 1536
HaeII	RGCGCY	2 cut(s)	78, 90
HaeIII	GGCC	6 cut(s)	288, 1088, 1229, 1586, 1701, 1713
HapII	CCGG	3 cut(s)	81, 176, 1702
HgaI	GACGC	2 cut(s)	96, 509
HhaI	GCGC	3 cut(s)	77, 89, 843
Hin1II	CATG	9 cut(s)	15, 603, 976, 1021, 1207, 1220, 1346, 1466, 1863
Hin6I	GCGC	3 cut(s)	75, 87, 841
HinP1I	GCGC	3 cut(s)	75, 87, 841
HincII	GTYRAC	1 cut(s)	1471
HindII	GTYRAC	1 cut(s)	1471
HinfI	GANTC	6 cut(s)	346, 915, 1181, 1292, 1613, 1730
HpaII	CCGG	3 cut(s)	81, 176, 1702
HphI	GGTGA	5 cut(s)	461, 509, 1190, 1358, 1499
Hpy166II	GTNNAC	5 cut(s)	117, 1177, 1238, 1471, 1507
Hpy188I	TCNGA	9 cut(s)	141, 522, 570, 797, 1093, 1127, 1186, 1257, 1724
Hpy188III	TCNNGA	6 cut(s)	57, 587, 618, 947, 1178, 1622
Hpy8I	GTNNAC	5 cut(s)	117, 1177, 1238, 1471, 1507
HpyAV	CCTTC	7 cut(s)	146, 165, 658, 1122, 1220, 1276, 1719
HpyCH4III	ACNGT	4 cut(s)	146, 401, 1322, 1647
HpyCH4IV	ACGT	2 cut(s)	1435, 1455
HpyF3I	CTNAG	2 cut(s)	42, 768
HpySE526I	ACGT	2 cut(s)	1435, 1455
Hsp92II	CATG	9 cut(s)	15, 603, 976, 1021, 1207, 1220, 1346, 1466, 1863
HspAI	GCGC	3 cut(s)	75, 87, 841
KspI	CCGCGG	1 cut(s)	313
Kzo9I	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
LmnI	GCTCC	6 cut(s)	94, 178, 739, 818, 826, 1286
LweI	GCATC	2 cut(s)	154, 406
MabI	ACCWGGT	1 cut(s)	1027
MaeI	CTAG	6 cut(s)	444, 735, 912, 1140, 1547, 1595
MaeII	ACGT	2 cut(s)	1435, 1455
MaeIII	GTNAC	7 cut(s)	449, 497, 1196, 1346, 1641, 1715, 1849
MalI	GATC	7 cut(s)	61, 204, 226, 572, 960, 1479, 1660
MbiI	CCGCTC	1 cut(s)	1395
MboI	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
MboII	GAAGA	7 cut(s)	54, 368, 437, 738, 897, 1472, 1653
MflI	RGATCY	2 cut(s)	59, 224
MhlI	GDGCHC	2 cut(s)	607, 823
MlsI	TGGCCA	1 cut(s)	1586
MluCI	AATT	8 cut(s)	31, 657, 773, 825, 999, 1169, 1407, 1573
MluNI	TGGCCA	1 cut(s)	1586
MlyI	GAGTC	2 cut(s)	924, 1190
MmeI	TCCRAC	3 cut(s)	141, 1105, 1183
Mox20I	TGGCCA	1 cut(s)	1586
MroXI	GAANNNNTTC	3 cut(s)	429, 1173, 1729
MscI	TGGCCA	1 cut(s)	1586
MseI	TTAA	5 cut(s)	183, 408, 507, 1389, 1563
Msp20I	TGGCCA	1 cut(s)	1586
MspA1I	CMGCKG	6 cut(s)	41, 95, 312, 556, 629, 838
MspI	CCGG	3 cut(s)	81, 176, 1702
MspR9I	CCNGG	4 cut(s)	882, 1029, 1298, 1845
Mva1269I	GAATGC	1 cut(s)	969
MvaI	CCWGG	4 cut(s)	882, 1029, 1298, 1845
MvnI	CGCG	2 cut(s)	312, 843
NdeII	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
NlaIII	CATG	9 cut(s)	15, 603, 976, 1021, 1207, 1220, 1346, 1466, 1863
NlaIV	GGNNCC	3 cut(s)	143, 378, 1682
NmuCI	GTSAC	6 cut(s)	449, 497, 1196, 1346, 1641, 1715
NspI	RCATGY	3 cut(s)	603, 1021, 1220
PaeI	GCATGC	1 cut(s)	1220
PaqCI	CACCTGC	2 cut(s)	178, 199
PcsI	WCGNNNNNNNCGW	1 cut(s)	1525
PctI	GAATGC	1 cut(s)	969
PdmI	GAANNNNTTC	3 cut(s)	429, 1173, 1729
PfeI	GAWTC	4 cut(s)	346, 1292, 1613, 1730
PflMI	CCANNNNNTGG	2 cut(s)	1165, 1860
PfoI	TCCNGGA	1 cut(s)	880
PleI	GAGTC	2 cut(s)	923, 1189
PmaCI	CACGTG	1 cut(s)	1436
PmlI	CACGTG	1 cut(s)	1436
PpsI	GAGTC	2 cut(s)	923, 1189
Ppu21I	YACGTR	1 cut(s)	1436
Psp124BI	GAGCTC	1 cut(s)	823
Psp6I	CCWGG	4 cut(s)	880, 1027, 1296, 1843
PspCI	CACGTG	1 cut(s)	1436
PspEI	GGTNACC	1 cut(s)	1849
PspFI	CCCAGC	2 cut(s)	98, 1532
PspGI	CCWGG	4 cut(s)	880, 1027, 1296, 1843
PspN4I	GGNNCC	3 cut(s)	143, 378, 1682
PspPI	GGNCC	4 cut(s)	114, 1207, 1227, 1841
PstI	CTGCAG	1 cut(s)	40
PstNI	CAGNNNCTG	1 cut(s)	1084
PsuI	RGATCY	2 cut(s)	59, 224
PvuII	CAGCTG	3 cut(s)	41, 629, 838
RsaI	GTAC	4 cut(s)	1144, 1237, 1522, 1629
RsaNI	GTAC	4 cut(s)	1143, 1236, 1521, 1628
SacI	GAGCTC	1 cut(s)	823
SacII	CCGCGG	1 cut(s)	313
SaqAI	TTAA	5 cut(s)	183, 408, 507, 1389, 1563
Sau3AI	GATC	7 cut(s)	59, 202, 224, 570, 958, 1477, 1658
Sau96I	GGNCC	4 cut(s)	114, 1207, 1227, 1841
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	2 cut(s)	924, 1190
ScrFI	CCNGG	4 cut(s)	882, 1029, 1298, 1845
SduI	GDGCHC	2 cut(s)	607, 823
SexAI	ACCWGGT	1 cut(s)	1027
SfaNI	GCATC	2 cut(s)	154, 406
SfcI	CTRYAG	2 cut(s)	36, 1735
Sfr303I	CCGCGG	1 cut(s)	313
SgrBI	CCGCGG	1 cut(s)	313
SinI	GGWCC	3 cut(s)	114, 1207, 1841
SpeI	ACTAGT	1 cut(s)	443
SphI	GCATGC	1 cut(s)	1220
Sse9I	AATT	8 cut(s)	31, 657, 773, 825, 999, 1169, 1407, 1573
SspI	AATATT	2 cut(s)	517, 931
SspMI	CTAG	6 cut(s)	444, 735, 912, 1140, 1547, 1595
SstI	GAGCTC	1 cut(s)	823
StyD4I	CCNGG	4 cut(s)	880, 1027, 1296, 1843
TaaI	ACNGT	4 cut(s)	146, 401, 1322, 1647
TaiI	ACGT	2 cut(s)	1438, 1458
TaqI	TCGA	3 cut(s)	961, 1528, 1657
TaqII	GACCGA	1 cut(s)	102
TasI	AATT	8 cut(s)	31, 657, 773, 825, 999, 1169, 1407, 1573
TatI	WGTACW	1 cut(s)	1142
TauI	GCSGC	5 cut(s)	133, 291, 312, 559, 1398
TfiI	GAWTC	4 cut(s)	346, 1292, 1613, 1730
Tru1I	TTAA	5 cut(s)	183, 408, 507, 1389, 1563
Tru9I	TTAA	5 cut(s)	183, 408, 507, 1389, 1563
TscAI	CASTG	6 cut(s)	298, 406, 1060, 1310, 1587, 1861
TseFI	GTSAC	6 cut(s)	449, 497, 1196, 1346, 1641, 1715
Tsp45I	GTSAC	6 cut(s)	449, 497, 1196, 1346, 1641, 1715
TspDTI	ATGAA	7 cut(s)	438, 677, 768, 818, 1331, 1331, 1566
TspRI	CASTG	6 cut(s)	298, 406, 1060, 1310, 1587, 1861
Van91I	CCANNNNNTGG	2 cut(s)	1165, 1860
VpaK11BI	GGWCC	3 cut(s)	114, 1207, 1841
XagI	CCTNNNNNAGG	1 cut(s)	1026
XapI	RAATTY	3 cut(s)	31, 773, 1169
XceI	RCATGY	3 cut(s)	603, 1021, 1220
XcmI	CCANNNNNNNNNTGG	1 cut(s)	614
XmnI	GAANNNNTTC	3 cut(s)	429, 1173, 1729
XspI	CTAG	6 cut(s)	444, 735, 912, 1140, 1547, 1595
ZrmI	AGTACT	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.