AT4G03460

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000494
Physical Location & Seq
Reverse (-)
1537118 .. 1540713
3596 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03460.1

Sequence Viewer

Length: 1887 bp
ATGGGAAGGTCTGATCTGGATTTTGACCGTCAGAAGAAAGACGCAAGCTCTAGGATGTTTTATGCAGACGAAACCGGGCGTACGCACTCTCTCGATTTGTCAACTCTCTTCAATGACACAAGTGAAACTGTGCCAATGGGTCCAAAGACCATCGCCGCTGTAAGAGCAGGTGATGAAACTTACCTGAGAGATATGAAATTTGATGTTAACATTGCTTTAAGCTCAGTGAACGATCATGGGAATACAATGCTTCATCTTGCTGCAGCCGCGGGTCACACCGACTTAGTGTGTTATATACTCAATGCGTACCCAGGTCTGCTTATGAAGTCAAATTCCATGGGGGAAGTTGCTCTCCATGTTGCAGCAGGTGCAGGCCATCTCGCTGTTGTTGAGGCTCTGGTTAGTTTTATCAAAGATATATCTTGTAATAAGCCTGGTGTTGCCAAAAAGATATACTTTGCCAAGGACAGACACCAAGACAATGCTTTACATGTCTCTTTAAAAAGAAAACATTTGAAGGTGGCTTCCTGTTTGGTTTGTGCAGAGCAAAGTTTGTCTTTTGTAGCAAACAACGATGGGGTTTCTCCCTTGTATTTAGCTGTTGAAGCTGGACAGGCTGATCTTGCAAAAACAATGTGGCAACATTCAAATAATGGATCAAGTAGCACATCTACTTTAGCTTCAAAGATTGGAGGAAGATCCATAGTACATGGCGCGATGAAGGCTAGGAGAAAAGATATTCTTGTTGCTATACTTAGTGAAGATGCAAGTCTTATTAACTTTAGAGATGAAGGAAGGACTTGTCTTTCTTTTGGAGCATCCTTAGGGTATTATGAAGGGTTTTGCTATCTGTTAGACAAGGCTCTAGACAGTGTTTATGTCAGTGATGATGATGGGTCCTTTCCAATTCATATGGCCGTGAAGTATGGTTATGTCAAAATTCTCAAGGCAATTCTTAAACGTTGTCCAGACGCACTTGAGTTACTTGACAGAGAAAATCAAAATGTTCTTCATGTTGCGGCAAAGAATGGAAAAATCGAAGTCCTCAAATTTATTTTAAGATGTTGTAAGGATAAGAACAAGGAAAAGTTGATTAATGAAGAAGATGCAAATGGAAACACGCCATTGCATTTGGCCACCAAAAACTGGCACCCTAAAGTTGTGAGTATGCTCACTTGGGACAACAGAGTTGACCTGAAAACGCTGAACCATGACGGTGTCACAGCTCTAGATATCGCTGAGAAAAACATGGATTCCAGCTACACATTTTTTGAGAGGTTGACTTGGATGGCTTTGATATCTGCTGGTGCACCAAGAGGTCCCAAACTAATATTATCGACTCCAGTAACACAAAACTCAGATGGTGGAAAGTACAAAGATCGGGTTAATACACTTCTGTTAGTGGCCACTCTTGTAGCCACTATGACTTTCACTGCAGGGTTTACACTACCAGGGGGTTACAATGGTTCTGTTCCCAACTTTGGAATGGCAACATTGGCCAAGAAAACAGCGTTCCAAGTGTTTCTGGTATTCGACACCTTGGCGATGTACTGTTCTATCATAACAATAGTTGCTCTCATTTGGGCGCAATTGGGCGATCTTTCTCTTATCATGAAAGCTTTCAACCTTGCGTTGCCACTTCTCGGACTTGCGCTTACATCCATGTCAATAGCTTTTATGGCTGGCACGTATGCTGCAGTAAGCCACCTCCCTTTGCTTGCGTATTTCATATTGGGCATCGGCTTGATCTTCCTCTTGGTTTTGCTGCTGATCATTATTCCATATGTGTCCCCACATTCTCCTACCCAACCCTTTCTTAGACACATCTTTTACTACCCCTATTTCCTTATGCTTTTGGTCGCTGGTGACAACAGAAACAAGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

628

Amino Acids

68.81

Weight (kDa)

8.47

Isoelectric Point (pI)

29.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_5 PF13857 70 - 121 6.5e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 74 - 135 2.2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 295 - 360 5.5e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 323 - 379 6.4e-06 Ankyrin repeats (many copies)
Ank_KRIT1 PF24521 332 - 420 7.7e-06 KRIT1 ankyrin-repeats domain
Ank_4 PF13637 337 - 391 2.9e-06 Ankyrin repeats (many copies)
PGG PF13962 457 - 565 4.7e-30 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 158, 356
Acc36I ACCTGC 2 cut(s) 158, 356
AccB1I GGYRCC 1 cut(s) 1149
AccB7I CCANNNNNTGG 1 cut(s) 1146
AccII CGCG 2 cut(s) 269, 716
AciI CCGC 4 cut(s) 156, 267, 269, 1019
AclI AACGTT 1 cut(s) 961
AclWI GGATC 2 cut(s) 664, 693
AcoI YGGCCR 4 cut(s) 915, 1134, 1404, 1497
AcsI RAATTY 4 cut(s) 197, 331, 939, 1049
AfaI GTAC 6 cut(s) 82, 308, 708, 1373, 1550, 1883
AfiI CCNNNNNNNGG 3 cut(s) 1146, 1481, 1643
AflIII ACRYGT 1 cut(s) 490
AgsI TTSAA 6 cut(s) 112, 517, 605, 648, 684, 1624
AjnI CCWGG 3 cut(s) 310, 433, 1450
AluBI AGCT 9 cut(s) 48, 222, 599, 608, 680, 1226, 1260, 1619, 1673
AluI AGCT 9 cut(s) 48, 222, 599, 608, 680, 1226, 1260, 1619, 1673
Alw21I GWGCWC 1 cut(s) 1312
Alw26I GTCTC 1 cut(s) 499
Alw44I GTGCAC 1 cut(s) 1308
AlwI GGATC 2 cut(s) 664, 693
AoxI GGCC 5 cut(s) 373, 915, 1134, 1404, 1497
ApaLI GTGCAC 1 cut(s) 1308
ApeKI GCWGC 5 cut(s) 260, 263, 362, 1694, 1765
ApoI RAATTY 4 cut(s) 197, 331, 939, 1049
AseI ATTAAT 1 cut(s) 1095
Asp700I GAANNNNTTC 1 cut(s) 1619
AspLEI GCGC 3 cut(s) 716, 1588, 1654
AspS9I GGNCC 3 cut(s) 140, 897, 1319
AsuC2I CCSGG 1 cut(s) 76
AsuHPI GGTGA 2 cut(s) 182, 1877
AvaII GGWCC 3 cut(s) 140, 897, 1319
AxyI CCTNAGG 1 cut(s) 823
BaeGI GKGCMC 1 cut(s) 1312
BalI TGGCCA 3 cut(s) 1136, 1406, 1499
BanI GGYRCC 1 cut(s) 1149
Bbv12I GWGCWC 1 cut(s) 1312
BbvI GCAGC 5 cut(s) 247, 275, 374, 1681, 1752
BccI CCATC 6 cut(s) 158, 384, 569, 887, 1282, 1355
BceAI ACGGC 1 cut(s) 902
BciT130I CCWGG 3 cut(s) 312, 435, 1452
BclI TGATCA 1 cut(s) 1770
BcnI CCSGG 1 cut(s) 76
BcoDI GTCTC 1 cut(s) 499
BfaI CTAG 4 cut(s) 51, 726, 866, 1229
BfmI CTRYAG 3 cut(s) 261, 1434, 1695
BfuAI ACCTGC 2 cut(s) 158, 356
BisI GCNGC 8 cut(s) 156, 261, 264, 267, 363, 1020, 1695, 1766
BlsI GCNGC 8 cut(s) 157, 262, 265, 268, 364, 1021, 1696, 1767
BmcAI AGTACT 1 cut(s) 1883
Bme1390I CCNGG 4 cut(s) 76, 312, 435, 1452
Bme18I GGWCC 3 cut(s) 140, 897, 1319
BmgT120I GGNCC 3 cut(s) 140, 897, 1319
BmiI GGNNCC 4 cut(s) 141, 898, 1151, 1321
BmrFI CCNGG 4 cut(s) 76, 312, 435, 1452
BmsI GCATC 4 cut(s) 754, 827, 1096, 1746
BpmI CTGGAG 1 cut(s) 1326
BpuEI CTTGAG 2 cut(s) 929, 998
BpuMI CCSGG 1 cut(s) 76
BsaAI YACGTR 1 cut(s) 1689
BsaJI CCNNGG 6 cut(s) 267, 310, 336, 462, 1451, 1539
Bsc4I CCNNNNNNNGG 3 cut(s) 1146, 1481, 1643
Bse1I ACTGG 2 cut(s) 1151, 1343
Bse21I CCTNAGG 1 cut(s) 823
Bse3DI GCAATG 2 cut(s) 210, 1124
BseBI CCWGG 3 cut(s) 312, 435, 1452
BseDI CCNNGG 6 cut(s) 267, 310, 336, 462, 1451, 1539
BseGI GGATG 4 cut(s) 60, 818, 1293, 1658
BseLI CCNNNNNNNGG 3 cut(s) 1146, 1481, 1643
BseMI GCAATG 2 cut(s) 210, 1124
BseMII CTCAG 4 cut(s) 176, 237, 1230, 1371
BseNI ACTGG 2 cut(s) 1151, 1343
BseSI GKGCMC 1 cut(s) 1312
BseXI GCAGC 5 cut(s) 247, 275, 374, 1681, 1752
BsgI GTGCAG 2 cut(s) 390, 561
Bsh1236I CGCG 2 cut(s) 269, 716
BshFI GGCC 5 cut(s) 375, 917, 1136, 1406, 1499
BshNI GGYRCC 1 cut(s) 1149
BsiHKAI GWGCWC 1 cut(s) 1312
BsiSI CCGG 1 cut(s) 75
BsiWI CGTACG 1 cut(s) 80
BslFI GGGAC 3 cut(s) 1193, 1305, 1774
BslI CCNNNNNNNGG 3 cut(s) 1146, 1481, 1643
BsmAI GTCTC 1 cut(s) 499
BsmFI GGGAC 3 cut(s) 1193, 1305, 1774
BsnI GGCC 5 cut(s) 375, 917, 1136, 1406, 1499
Bsp1286I GDGCHC 1 cut(s) 1312
Bsp143I GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 4 cut(s) 156, 267, 269, 1019
BspANI GGCC 5 cut(s) 375, 917, 1136, 1406, 1499
BspCNI CTCAG 4 cut(s) 177, 236, 1231, 1370
BspFNI CGCG 2 cut(s) 269, 716
BspHI TCATGA 1 cut(s) 1611
BspLI GGNNCC 4 cut(s) 141, 898, 1151, 1321
BspMAI CTGCAG 3 cut(s) 265, 1438, 1699
BspMI ACCTGC 2 cut(s) 158, 356
BspPI GGATC 2 cut(s) 664, 693
BspT107I GGYRCC 1 cut(s) 1149
BsrDI GCAATG 2 cut(s) 210, 1124
BsrI ACTGG 2 cut(s) 1151, 1343
BssECI CCNNGG 6 cut(s) 267, 310, 336, 462, 1451, 1539
BssMI GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
BssT1I CCWWGG 3 cut(s) 336, 462, 1539
Bst2UI CCWGG 3 cut(s) 312, 435, 1452
Bst4CI ACNGT 5 cut(s) 29, 130, 872, 1217, 1553
Bst6I CTCTTC 1 cut(s) 113
BstAPI GCANNNNNTGC 1 cut(s) 368
BstBAI YACGTR 1 cut(s) 1689
BstC8I GCNNGC 4 cut(s) 46, 373, 1684, 1719
BstDEI CTNAG 8 cut(s) 185, 223, 283, 755, 823, 1239, 1357, 1817
BstDSI CCRYGG 2 cut(s) 267, 336
BstF5I GGATG 4 cut(s) 60, 818, 1293, 1658
BstFNI CGCG 2 cut(s) 269, 716
BstHHI GCGC 3 cut(s) 716, 1588, 1654
BstKTI GATC 9 cut(s) 16, 235, 622, 659, 701, 1381, 1600, 1749, 1773
BstMAI GTCTC 1 cut(s) 499
BstMBI GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
BstMWI GCNNNNNNNGC 9 cut(s) 164, 266, 368, 605, 614, 623, 722, 1496, 1679
BstNI CCWGG 3 cut(s) 312, 435, 1452
BstNSI RCATGY 1 cut(s) 494
BstSCI CCNGG 4 cut(s) 74, 310, 433, 1450
BstSFI CTRYAG 3 cut(s) 261, 1434, 1695
BstSLI GKGCMC 1 cut(s) 1312
BstUI CGCG 2 cut(s) 269, 716
BstV1I GCAGC 5 cut(s) 247, 275, 374, 1681, 1752
BstX2I RGATCY 1 cut(s) 698
BstYI RGATCY 1 cut(s) 698
Bsu36I CCTNAGG 1 cut(s) 823
BsuRI GGCC 5 cut(s) 375, 917, 1136, 1406, 1499
BtgI CCRYGG 2 cut(s) 267, 336
BtgZI GCGATG 3 cut(s) 136, 731, 1559
BtsCI GGATG 4 cut(s) 60, 818, 1293, 1658
BtsI GCAGTG 1 cut(s) 1431
BtsIMutI CAGTG 4 cut(s) 231, 877, 889, 1431
BveI ACCTGC 2 cut(s) 158, 356
Cac8I GCNNGC 4 cut(s) 46, 373, 1684, 1719
CciI TCATGA 1 cut(s) 1611
CfoI GCGC 3 cut(s) 716, 1588, 1654
Cfr13I GGNCC 3 cut(s) 140, 897, 1319
Cfr42I CCGCGG 1 cut(s) 270
CseI GACGC 2 cut(s) 50, 980
Csp6I GTAC 6 cut(s) 81, 307, 707, 1372, 1549, 1882
CviQI GTAC 6 cut(s) 81, 307, 707, 1372, 1549, 1882
DdeI CTNAG 8 cut(s) 185, 223, 283, 755, 823, 1239, 1357, 1817
DpnI GATC 9 cut(s) 15, 234, 621, 658, 700, 1380, 1599, 1748, 1772
DpnII GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
DraI TTTAAA 1 cut(s) 501
EaeI YGGCCR 4 cut(s) 915, 1134, 1404, 1497
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
Eco130I CCWWGG 3 cut(s) 336, 462, 1539
Eco32I GATATC 2 cut(s) 1234, 1299
Eco47I GGWCC 3 cut(s) 140, 897, 1319
Eco81I CCTNAGG 1 cut(s) 823
EcoO109I RGGNCCY 2 cut(s) 897, 1319
EcoRII CCWGG 3 cut(s) 310, 433, 1450
EcoRV GATATC 2 cut(s) 1234, 1299
EcoT14I CCWWGG 3 cut(s) 336, 462, 1539
ErhI CCWWGG 3 cut(s) 336, 462, 1539
FalI AAGNNNNNCTT 6 cut(s) 440, 472, 541, 573, 726, 758
FaqI GGGAC 3 cut(s) 1193, 1305, 1774
FauI CCCGC 1 cut(s) 262
FauNDI CATATG 2 cut(s) 912, 1783
FbaI TGATCA 1 cut(s) 1770
Fnu4HI GCNGC 8 cut(s) 156, 261, 264, 267, 363, 1020, 1695, 1766
FokI GGATG 4 cut(s) 67, 805, 1300, 1645
Fsp4HI GCNGC 8 cut(s) 156, 261, 264, 267, 363, 1020, 1695, 1766
FspBI CTAG 4 cut(s) 51, 726, 866, 1229
GlaI GCGC 3 cut(s) 715, 1587, 1653
GluI GCNGC 8 cut(s) 156, 261, 264, 267, 363, 1020, 1695, 1766
GsuI CTGGAG 1 cut(s) 1326
HaeIII GGCC 5 cut(s) 375, 917, 1136, 1406, 1499
HapII CCGG 1 cut(s) 75
HgaI GACGC 2 cut(s) 50, 980
HhaI GCGC 3 cut(s) 716, 1588, 1654
Hin6I GCGC 3 cut(s) 714, 1586, 1652
HinP1I GCGC 3 cut(s) 714, 1586, 1652
HincII GTYRAC 4 cut(s) 102, 208, 1192, 1281
HindII GTYRAC 4 cut(s) 102, 208, 1192, 1281
HindIII AAGCTT 1 cut(s) 1617
HinfI GANTC 2 cut(s) 1253, 1339
HpaI GTTAAC 1 cut(s) 208
HpaII CCGG 1 cut(s) 75
HphI GGTGA 2 cut(s) 182, 1877
Hpy166II GTNNAC 7 cut(s) 102, 208, 229, 1192, 1281, 1310, 1443
Hpy188I TCNGA 4 cut(s) 13, 33, 1360, 1646
Hpy188III TCNNGA 6 cut(s) 17, 92, 866, 968, 1229, 1612
Hpy8I GTNNAC 7 cut(s) 102, 208, 229, 1192, 1281, 1310, 1443
HpyAV CCTTC 5 cut(s) 511, 715, 785, 789, 830
HpyCH4III ACNGT 5 cut(s) 29, 130, 872, 1217, 1553
HpyCH4IV ACGT 2 cut(s) 961, 1688
HpyF10VI GCNNNNNNNGC 9 cut(s) 164, 266, 368, 605, 614, 623, 722, 1496, 1679
HpyF3I CTNAG 8 cut(s) 185, 223, 283, 755, 823, 1239, 1357, 1817
HpySE526I ACGT 2 cut(s) 961, 1688
HspAI GCGC 3 cut(s) 714, 1586, 1652
Ksp22I TGATCA 1 cut(s) 1770
KspAI GTTAAC 1 cut(s) 208
KspI CCGCGG 1 cut(s) 270
Kzo9I GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
LmnI GCTCC 1 cut(s) 815
Lsp1109I GCAGC 5 cut(s) 247, 275, 374, 1681, 1752
LweI GCATC 4 cut(s) 754, 827, 1096, 1746
MaeI CTAG 4 cut(s) 51, 726, 866, 1229
MaeII ACGT 2 cut(s) 961, 1688
MaeIII GTNAC 6 cut(s) 272, 981, 1219, 1345, 1457, 1865
MalI GATC 9 cut(s) 15, 234, 621, 658, 700, 1380, 1599, 1748, 1772
MboI GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
MboII GAAGA 8 cut(s) 46, 100, 708, 773, 1001, 1112, 1115, 1741
MfeI CAATTG 1 cut(s) 1589
MflI RGATCY 1 cut(s) 698
MhlI GDGCHC 1 cut(s) 1312
MlsI TGGCCA 3 cut(s) 1136, 1406, 1499
MluCI AATT 7 cut(s) 197, 331, 906, 939, 951, 1049, 1589
MluNI TGGCCA 3 cut(s) 1136, 1406, 1499
MlyI GAGTC 1 cut(s) 1333
MnlI CCTC 7 cut(s) 385, 686, 1055, 1269, 1310, 1718, 1763
Mox20I TGGCCA 3 cut(s) 1136, 1406, 1499
MroXI GAANNNNTTC 1 cut(s) 1619
MscI TGGCCA 3 cut(s) 1136, 1406, 1499
MseI TTAA 8 cut(s) 207, 218, 500, 777, 957, 1058, 1095, 1386
MslI CAYNNNNRTG 1 cut(s) 1215
Msp20I TGGCCA 3 cut(s) 1136, 1406, 1499
MspA1I CMGCKG 2 cut(s) 158, 269
MspI CCGG 1 cut(s) 75
MspR9I CCNGG 4 cut(s) 76, 312, 435, 1452
MunI CAATTG 1 cut(s) 1589
MvaI CCWGG 3 cut(s) 312, 435, 1452
MvnI CGCG 2 cut(s) 269, 716
MwoI GCNNNNNNNGC 9 cut(s) 164, 266, 368, 605, 614, 623, 722, 1496, 1679
NciI CCSGG 1 cut(s) 76
NcoI CCATGG 1 cut(s) 336
NdeI CATATG 2 cut(s) 912, 1783
NdeII GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
NlaIV GGNNCC 4 cut(s) 141, 898, 1151, 1321
NmuCI GTSAC 3 cut(s) 272, 1219, 1865
NspI RCATGY 1 cut(s) 494
PagI TCATGA 1 cut(s) 1611
PaqCI CACCTGC 2 cut(s) 158, 356
PciI ACATGT 1 cut(s) 490
PdmI GAANNNNTTC 1 cut(s) 1619
PfeI GAWTC 1 cut(s) 1253
Pfl23II CGTACG 1 cut(s) 80
PflFI GACNNNGTC 1 cut(s) 1217
PflMI CCANNNNNTGG 1 cut(s) 1146
PkrI GCNGC 8 cut(s) 157, 262, 265, 268, 364, 1021, 1696, 1767
PleI GAGTC 1 cut(s) 1333
PpsI GAGTC 1 cut(s) 1333
Ppu21I YACGTR 1 cut(s) 1689
PpuMI RGGWCCY 2 cut(s) 897, 1319
PscI ACATGT 1 cut(s) 490
PshBI ATTAAT 1 cut(s) 1095
Psp1406I AACGTT 1 cut(s) 961
Psp5II RGGWCCY 2 cut(s) 897, 1319
Psp6I CCWGG 3 cut(s) 310, 433, 1450
PspGI CCWGG 3 cut(s) 310, 433, 1450
PspLI CGTACG 1 cut(s) 80
PspN4I GGNNCC 4 cut(s) 141, 898, 1151, 1321
PspPI GGNCC 3 cut(s) 140, 897, 1319
PspPPI RGGWCCY 2 cut(s) 897, 1319
PstI CTGCAG 3 cut(s) 265, 1438, 1699
PsuI RGATCY 1 cut(s) 698
PsyI GACNNNGTC 1 cut(s) 1217
RsaI GTAC 6 cut(s) 82, 308, 708, 1373, 1550, 1883
RsaNI GTAC 6 cut(s) 81, 307, 707, 1372, 1549, 1882
RseI CAYNNNNRTG 1 cut(s) 1215
SacII CCGCGG 1 cut(s) 270
SaqAI TTAA 8 cut(s) 207, 218, 500, 777, 957, 1058, 1095, 1386
SatI GCNGC 8 cut(s) 156, 261, 264, 267, 363, 1020, 1695, 1766
Sau3AI GATC 9 cut(s) 13, 232, 619, 656, 698, 1378, 1597, 1746, 1770
Sau96I GGNCC 3 cut(s) 140, 897, 1319
ScaI AGTACT 1 cut(s) 1883
SchI GAGTC 1 cut(s) 1333
ScrFI CCNGG 4 cut(s) 76, 312, 435, 1452
SduI GDGCHC 1 cut(s) 1312
SfaNI GCATC 4 cut(s) 754, 827, 1096, 1746
SfcI CTRYAG 3 cut(s) 261, 1434, 1695
Sfr303I CCGCGG 1 cut(s) 270
SgrBI CCGCGG 1 cut(s) 270
SinI GGWCC 3 cut(s) 140, 897, 1319
SmiMI CAYNNNNRTG 1 cut(s) 1215
SmlI CTYRAG 2 cut(s) 944, 977
SmoI CTYRAG 2 cut(s) 944, 977
Sse9I AATT 7 cut(s) 197, 331, 906, 939, 951, 1049, 1589
SsiI CCGC 4 cut(s) 156, 267, 269, 1019
SspI AATATT 1 cut(s) 1332
SspMI CTAG 4 cut(s) 51, 726, 866, 1229
StyD4I CCNGG 4 cut(s) 74, 310, 433, 1450
StyI CCWWGG 3 cut(s) 336, 462, 1539
TaaI ACNGT 5 cut(s) 29, 130, 872, 1217, 1553
TaiI ACGT 2 cut(s) 964, 1691
TaqI TCGA 4 cut(s) 93, 1038, 1337, 1533
TasI AATT 7 cut(s) 197, 331, 906, 939, 951, 1049, 1589
TatI WGTACW 4 cut(s) 706, 1371, 1548, 1881
TauI GCSGC 3 cut(s) 158, 269, 1022
TfiI GAWTC 1 cut(s) 1253
Tru1I TTAA 8 cut(s) 207, 218, 500, 777, 957, 1058, 1095, 1386
Tru9I TTAA 8 cut(s) 207, 218, 500, 777, 957, 1058, 1095, 1386
TscAI CASTG 4 cut(s) 231, 877, 889, 1438
TseFI GTSAC 3 cut(s) 272, 1219, 1865
TseI GCWGC 5 cut(s) 260, 263, 362, 1694, 1765
Tsp45I GTSAC 3 cut(s) 272, 1219, 1865
TspRI CASTG 4 cut(s) 231, 877, 889, 1438
Tth111I GACNNNGTC 1 cut(s) 1217
Van91I CCANNNNNTGG 1 cut(s) 1146
VneI GTGCAC 1 cut(s) 1308
VpaK11BI GGWCC 3 cut(s) 140, 897, 1319
VspI ATTAAT 1 cut(s) 1095
XapI RAATTY 4 cut(s) 197, 331, 939, 1049
XbaI TCTAGA 2 cut(s) 865, 1228
XceI RCATGY 1 cut(s) 494
XcmI CCANNNNNNNNNTGG 1 cut(s) 1483
XmnI GAANNNNTTC 1 cut(s) 1619
XspI CTAG 4 cut(s) 51, 726, 866, 1229
ZrmI AGTACT 1 cut(s) 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.