Rh3BG110200

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000494
Physical Location & Seq
Forward (+)
8949242 .. 8962480
13239 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG110200.1

Sequence Viewer

Length: 2043 bp
ATGGCTAGTTCGAGTTCCACAAATGAAGTAATACAAGATGAAATAACTGTAAACCAAGCTGCAGAGGATCTCGAGGCTACAGGGGACATACGAATGGATCCAAAATTATACAGGTATGTAACCACTGGTAAAGTAGACCAAAAAAGTGATTTCCGGGCAATAATTACGGCCCCCTTCTGTAATCCTTTTTCGGTCTTTAGACAAAGAGTAGAGGTCATGATCTACCAAAAAATCTTGGGCTTTTACGAATGGCTTCTCCATATGTATACAACCTACTGTTATTCCGGCTTCAGCATTCCCTCTGAAGTAGAATTACTGTTACAAATAAATGGAGACAAAGTAAGCCCTGGCCAGAATACAGTGCTTCACCTTGCGGCAAGTGTAGGCAATACCCATCTCGTCACACAGATACTGGATCGTTTTCCGGAACTTGTCAAAAAAAACAACTGTCGTGGAGATTCTCCGCTTCATGTTGCAGCACACGGTGGGCATCTATCTACGGTGCGCTGTTTGGTTGAAAAGTTGAAGATACTGATTGGTGAAAAGAATGCGGTTGGTGAAAAGAATGCGGTTGATGAAGAGAATGGTGAAAAGACTGCGGTTGGTAAAAAGAATGAGGAAGGAAACACAGCGTTACACATTGCCTTAGAAAATCACCACAAAAAAGTGGCCAAGTTTTTAGTCGAACAAAATGGATTGATCTCGCATTCCCAAAATAACAGCAAAAAGATACCGTTGTGCATGGCTGCGGAAGCTGGAAATCTTGACCTTGTTCAAGTTATGGTGGTCATGACACCAGCTGCTGTTTGGCAAGAGTCCAGTGGCTGCTCAATTTTGCGTGCTGCTATCGTGGGAAGGAATAATGACATCTTGAAGACATTATTATTCAAAATTGATCCTACTGTGTCAAAAGACGAAGAGGAAGAGGGGATGCCTCCTCTTGCACTTGCAGCATATATAGGTAACTTTGATGCCGTACGCTGCTTGTTAGACAAATGCAGTAACGATGCATACAGGCAGGACACAAATGGATTCTTTCCGATATATATAGCGTCCCGAAACGGAAACATCAAGATAGTTCAAGAATTCCTCAATCATTGCCCAGACTTGAAGGAGTTACATGACAAGCAAGGCCGGAACATTCTTCATGTGGCAGCTGCGTATGGACGAGCTAAGCTGGTTGAATATATGCTTGGAACGACCAAGCTTGAAATGCTTCTCAACGAAAGAGATAATTTCGGAAACACCCCTCTACACGTAGCTGTTCAGAACTGGCATCCTAGGATTGTCAAAATTCTGACCCGGGATAAGAGAGTTCACCAAAAGATTCTCAACAATAAGGGCATGACAGCATTTGATATTGCAGAGAAGTCCGAGGTGCATAAAGACATGCTGTTTCGATGGAAACTAACTTTTATGGCCTTGAGATTAGCTAATGCTCCCCGATCTGAGATACAAAGAGTTGCAAAAGAAAGTGGAGCAAATGATTATGGTGAGAAGACCAAGAATAATCCTGATTATCTACTATTCTCAAGAGAAAATATGAATACTCTCCTTATAGTGTCGACACTGGTGGCTGCTATAACTTTTGCTGCTGGCTTCACTGTGCCGGGAGGATATAAGAACTCTGGAACTGACGAAGGCATGGCAACCTTGCGTAATACAGCTCTATTCCAAATATTCTTGATATGCAACACCATTTCAATGTACAGCTCTATTACCGTTGCGATTGCGCTTATCTGGGCACAGGCAGGTGATCTTAAAATGATTTGTGTTGCTGTGAGGACTATACTACCCATGTTAGGCCTAGCTCTTATAATGATGTCCGTGGCATTCCTAGCTGGTGTTGATCTCGTAGCGAATAACCTTACTTGCGGCTACGTTGTCGTGGCCCTGGGCTCGTTTTTCATCGTCCAAGTAGTTGTGTTCATTCTTCCGCTCACAATCCCACTTTCCTCCAAGAATTGCATTACACACTTCATTTTACGTGGTAACCTTCGTTTGCTGATGATGGTAACTAGATATGAGGTTGAGAGTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 PGG

Protein Analysis

680

Amino Acids

75.44

Weight (kDa)

7.88

Isoelectric Point (pI)

27.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 103 - 174 1.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 122 - 230 1.1e-13 Ankyrin repeats (3 copies)
Ank_2 PF12796 199 - 262 1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 280 - 366 2.8e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 314 - 398 2.1e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 382 - 433 5.2e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 405 - 455 4.7e-06 Ankyrin repeats (many copies)
PGG PF13962 513 - 616 2.3e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1817
AarI CACCTGC 1 cut(s) 1742
Acc36I ACCTGC 1 cut(s) 1742
AccBSI CCGCTC 1 cut(s) 1939
AccI GTMKAC 3 cut(s) 135, 266, 1565
AccIII TCCGGA 1 cut(s) 424
AciI CCGC 8 cut(s) 374, 464, 551, 569, 599, 749, 1875, 1937
AclWI GGATC 5 cut(s) 75, 92, 105, 423, 890
AcoI YGGCCR 2 cut(s) 349, 669
AcsI RAATTY 2 cut(s) 1085, 1293
AcuI CTGAAG 2 cut(s) 274, 324
AdeI CACNNNGTG 1 cut(s) 485
AfaI GTAC 2 cut(s) 978, 1709
AfiI CCNNNNNNNGG 1 cut(s) 1802
AflIII ACRYGT 1 cut(s) 1255
AjnI CCWGG 2 cut(s) 346, 1893
AjuI GAANNNNNNNTTGG 2 cut(s) 1176, 1208
Alw26I GTCTC 1 cut(s) 327
AlwI GGATC 5 cut(s) 75, 92, 105, 423, 890
AlwNI CAGNNNCTG 3 cut(s) 412, 803, 825
Ama87I CYCGRG 2 cut(s) 71, 1302
Aor13HI TCCGGA 1 cut(s) 424
AoxI GGCC 7 cut(s) 168, 349, 669, 1132, 1419, 1804, 1890
ApoI RAATTY 2 cut(s) 1085, 1293
Asp700I GAANNNNTTC 2 cut(s) 252, 1215
AspA2I CCTAGG 1 cut(s) 1280
AspLEI GCGC 2 cut(s) 507, 1735
AspS9I GGNCC 2 cut(s) 169, 1891
AsuC2I CCSGG 4 cut(s) 155, 1303, 1304, 1611
AsuHPI GGTGA 8 cut(s) 359, 551, 569, 599, 647, 1310, 1505, 1766
AvaI CYCGRG 2 cut(s) 71, 1302
AvrII CCTAGG 1 cut(s) 1280
BaeGI GKGCMC 1 cut(s) 1747
BaeI ACNNNNGTAYC 2 cut(s) 722, 755
BalI TGGCCA 2 cut(s) 351, 671
BamHI GGATCC 1 cut(s) 97
BanII GRGCYC 1 cut(s) 1901
BarI GAAGNNNNNNTAC 2 cut(s) 297, 329
BbsI GAAGAC 2 cut(s) 881, 1505
BccI CCATC 3 cut(s) 402, 1395, 2005
BceAI ACGGC 2 cut(s) 183, 959
BciT130I CCWGG 2 cut(s) 348, 1895
BcnI CCSGG 4 cut(s) 155, 1303, 1304, 1611
BcoDI GTCTC 1 cut(s) 327
BfaI CTAG 5 cut(s) 6, 1281, 1808, 1838, 2019
BfmI CTRYAG 2 cut(s) 60, 78
BfuAI ACCTGC 1 cut(s) 1742
BlnI CCTAGG 1 cut(s) 1280
BlpI GCTNAGC 1 cut(s) 1173
Bme1390I CCNGG 6 cut(s) 155, 348, 1303, 1304, 1611, 1895
BmeT110I CYCGRG 2 cut(s) 71, 1302
BmgT120I GGNCC 2 cut(s) 169, 1891
BmiI GGNNCC 2 cut(s) 99, 171
BmrFI CCNGG 6 cut(s) 155, 348, 1303, 1304, 1611, 1895
BmsI GCATC 5 cut(s) 499, 921, 961, 997, 1285
BpiI GAAGAC 2 cut(s) 881, 1505
Bpu1102I GCTNAGC 1 cut(s) 1173
BpuEI CTTGAG 2 cut(s) 1444, 1516
BpuMI CCSGG 4 cut(s) 155, 1303, 1304, 1611
BsaAI YACGTR 2 cut(s) 1258, 1988
BsaJI CCNNGG 7 cut(s) 346, 1280, 1302, 1374, 1827, 1893, 1894
BsaWI WCCGGW 1 cut(s) 424
BsaXI ACNNNNNCTCC 2 cut(s) 324, 354
Bsc4I CCNNNNNNNGG 1 cut(s) 1802
Bse1I ACTGG 5 cut(s) 130, 417, 819, 1277, 1575
Bse3DI GCAATG 2 cut(s) 639, 1096
BseAI TCCGGA 1 cut(s) 424
BseBI CCWGG 2 cut(s) 348, 1895
BseDI CCNNGG 7 cut(s) 346, 1280, 1302, 1374, 1827, 1893, 1894
BseGI GGATG 2 cut(s) 936, 1276
BseLI CCNNNNNNNGG 1 cut(s) 1802
BseMI GCAATG 2 cut(s) 639, 1096
BseMII CTCAG 1 cut(s) 1440
BseNI ACTGG 5 cut(s) 130, 417, 819, 1277, 1575
BseRI GAGGAG 1 cut(s) 927
BseSI GKGCMC 1 cut(s) 1747
BshFI GGCC 7 cut(s) 170, 351, 671, 1134, 1421, 1806, 1892
BsiHKCI CYCGRG 2 cut(s) 71, 1302
BsiSI CCGG 6 cut(s) 154, 285, 425, 1135, 1303, 1610
BsiWI CGTACG 1 cut(s) 976
BslFI GGGAC 2 cut(s) 98, 1039
BslI CCNNNNNNNGG 1 cut(s) 1802
BsmAI GTCTC 1 cut(s) 327
BsmFI GGGAC 2 cut(s) 98, 1039
BsmI GAATGC 5 cut(s) 294, 553, 571, 706, 1832
BsnI GGCC 7 cut(s) 170, 351, 671, 1134, 1421, 1806, 1892
BsoBI CYCGRG 2 cut(s) 71, 1302
Bsp1286I GDGCHC 2 cut(s) 1747, 1901
Bsp13I TCCGGA 1 cut(s) 424
Bsp1407I TGTACA 1 cut(s) 1707
Bsp143I GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
Bsp1720I GCTNAGC 1 cut(s) 1173
BspACI CCGC 8 cut(s) 374, 464, 551, 569, 599, 749, 1875, 1937
BspANI GGCC 7 cut(s) 170, 351, 671, 1134, 1421, 1806, 1892
BspCNI CTCAG 1 cut(s) 1441
BspEI TCCGGA 1 cut(s) 424
BspHI TCATGA 2 cut(s) 216, 789
BspLI GGNNCC 2 cut(s) 99, 171
BspMAI CTGCAG 1 cut(s) 64
BspMI ACCTGC 1 cut(s) 1742
BspPI GGATC 5 cut(s) 75, 92, 105, 423, 890
BsrBI CCGCTC 1 cut(s) 1939
BsrDI GCAATG 2 cut(s) 639, 1096
BsrGI TGTACA 1 cut(s) 1707
BsrI ACTGG 5 cut(s) 130, 417, 819, 1277, 1575
BssECI CCNNGG 7 cut(s) 346, 1280, 1302, 1374, 1827, 1893, 1894
BssMI GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
BssNAI GTATAC 1 cut(s) 267
BssT1I CCWWGG 1 cut(s) 1280
Bst1107I GTATAC 1 cut(s) 267
Bst2UI CCWGG 2 cut(s) 348, 1895
Bst6I CTCTTC 3 cut(s) 573, 912, 918
BstAUI TGTACA 1 cut(s) 1707
BstBAI YACGTR 2 cut(s) 1258, 1988
BstC8I GCNNGC 2 cut(s) 840, 1597
BstDEI CTNAG 3 cut(s) 646, 1173, 1449
BstDSI CCRYGG 1 cut(s) 1827
BstEII GGTNACC 1 cut(s) 1991
BstF5I GGATG 2 cut(s) 936, 1276
BstHHI GCGC 2 cut(s) 507, 1735
BstKTI GATC 9 cut(s) 70, 100, 222, 418, 702, 898, 1448, 1759, 1852
BstMAI GTCTC 1 cut(s) 327
BstMBI GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
BstMWI GCNNNNNNNGC 4 cut(s) 752, 950, 1213, 1838
BstNI CCWGG 2 cut(s) 348, 1895
BstNSI RCATGY 1 cut(s) 1393
BstPI GGTNACC 1 cut(s) 1991
BstSCI CCNGG 6 cut(s) 153, 346, 1301, 1302, 1609, 1893
BstSFI CTRYAG 2 cut(s) 60, 78
BstSLI GKGCMC 1 cut(s) 1747
BstV2I GAAGAC 2 cut(s) 881, 1505
BstX2I RGATCY 2 cut(s) 67, 97
BstYI RGATCY 2 cut(s) 67, 97
BstZ17I GTATAC 1 cut(s) 267
BsuRI GGCC 7 cut(s) 170, 351, 671, 1134, 1421, 1806, 1892
BtgI CCRYGG 1 cut(s) 1827
BtsCI GGATG 2 cut(s) 936, 1276
BtsIMutI CAGTG 5 cut(s) 123, 366, 826, 1568, 1602
BveI ACCTGC 1 cut(s) 1742
Cac8I GCNNGC 2 cut(s) 840, 1597
CaiI CAGNNNCTG 3 cut(s) 412, 803, 825
CciI TCATGA 2 cut(s) 216, 789
CfoI GCGC 2 cut(s) 507, 1735
Cfr13I GGNCC 2 cut(s) 169, 1891
Cfr9I CCCGGG 1 cut(s) 1302
CseI GACGC 1 cut(s) 1041
Csp6I GTAC 2 cut(s) 977, 1708
CspCI CAANNNNNGTGG 2 cut(s) 433, 468
CviQI GTAC 2 cut(s) 977, 1708
DdeI CTNAG 3 cut(s) 646, 1173, 1449
DpnI GATC 9 cut(s) 69, 99, 221, 417, 701, 897, 1447, 1758, 1851
DpnII GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
DraIII CACNNNGTG 1 cut(s) 485
EaeI YGGCCR 2 cut(s) 349, 669
Eam1104I CTCTTC 3 cut(s) 573, 912, 918
EarI CTCTTC 3 cut(s) 573, 912, 918
Eco130I CCWWGG 1 cut(s) 1280
Eco147I AGGCCT 1 cut(s) 1806
Eco24I GRGCYC 1 cut(s) 1901
Eco57I CTGAAG 2 cut(s) 274, 324
Eco88I CYCGRG 2 cut(s) 71, 1302
Eco91I GGTNACC 1 cut(s) 1991
EcoO65I GGTNACC 1 cut(s) 1991
EcoRI GAATTC 1 cut(s) 1085
EcoRII CCWGG 2 cut(s) 346, 1893
EcoT14I CCWWGG 1 cut(s) 1280
EcoT22I ATGCAT 1 cut(s) 1012
EcoT38I GRGCYC 1 cut(s) 1901
ErhI CCWWGG 1 cut(s) 1280
FaqI GGGAC 2 cut(s) 98, 1039
FauNDI CATATG 1 cut(s) 261
FblI GTMKAC 3 cut(s) 135, 266, 1565
FokI GGATG 2 cut(s) 943, 1263
FriOI GRGCYC 1 cut(s) 1901
FspBI CTAG 5 cut(s) 6, 1281, 1808, 1838, 2019
GlaI GCGC 2 cut(s) 506, 1734
HaeIII GGCC 7 cut(s) 170, 351, 671, 1134, 1421, 1806, 1892
HapII CCGG 6 cut(s) 154, 285, 425, 1135, 1303, 1610
HgaI GACGC 1 cut(s) 1041
HhaI GCGC 2 cut(s) 507, 1735
Hin6I GCGC 2 cut(s) 505, 1733
HinP1I GCGC 2 cut(s) 505, 1733
HincII GTYRAC 1 cut(s) 1566
HindII GTYRAC 1 cut(s) 1566
HindIII AAGCTT 1 cut(s) 1205
HinfI GANTC 4 cut(s) 458, 815, 1032, 1327
HpaII CCGG 6 cut(s) 154, 285, 425, 1135, 1303, 1610
HphI GGTGA 8 cut(s) 359, 551, 569, 599, 647, 1310, 1505, 1766
Hpy166II GTNNAC 5 cut(s) 52, 136, 267, 1318, 1566
Hpy188I TCNGA 7 cut(s) 304, 1041, 1241, 1269, 1299, 1375, 1450
Hpy8I GTNNAC 5 cut(s) 52, 136, 267, 1318, 1566
HpyAV CCTTC 6 cut(s) 184, 614, 849, 1105, 1634, 2006
HpyCH4IV ACGT 3 cut(s) 1257, 1881, 1987
HpyF10VI GCNNNNNNNGC 4 cut(s) 752, 950, 1213, 1838
HpyF3I CTNAG 3 cut(s) 646, 1173, 1449
HpySE526I ACGT 3 cut(s) 1257, 1881, 1987
HspAI GCGC 2 cut(s) 505, 1733
Kpn2I TCCGGA 1 cut(s) 424
Kzo9I GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
LmnI GCTCC 2 cut(s) 1444, 1478
LweI GCATC 5 cut(s) 499, 921, 961, 997, 1285
MaeI CTAG 5 cut(s) 6, 1281, 1808, 1838, 2019
MaeII ACGT 3 cut(s) 1257, 1881, 1987
MaeIII GTNAC 9 cut(s) 118, 318, 400, 633, 962, 1001, 1116, 1991, 2014
MalI GATC 9 cut(s) 69, 99, 221, 417, 701, 897, 1447, 1758, 1851
MbiI CCGCTC 1 cut(s) 1939
MboI GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
MboII GAAGA 8 cut(s) 538, 590, 886, 929, 935, 1136, 1510, 1925
MflI RGATCY 2 cut(s) 67, 97
MhlI GDGCHC 2 cut(s) 1747, 1901
MlsI TGGCCA 2 cut(s) 351, 671
MluCI AATT 9 cut(s) 104, 162, 311, 831, 891, 1085, 1234, 1293, 1963
MluNI TGGCCA 2 cut(s) 351, 671
MlyI GAGTC 1 cut(s) 824
Mox20I TGGCCA 2 cut(s) 351, 671
Mph1103I ATGCAT 1 cut(s) 1012
MroI TCCGGA 1 cut(s) 424
MroXI GAANNNNTTC 2 cut(s) 252, 1215
MscI TGGCCA 2 cut(s) 351, 671
MseI TTAA 1 cut(s) 1761
MslI CAYNNNNRTG 2 cut(s) 92, 1703
Msp20I TGGCCA 2 cut(s) 351, 671
MspA1I CMGCKG 2 cut(s) 800, 1157
MspI CCGG 6 cut(s) 154, 285, 425, 1135, 1303, 1610
MspR9I CCNGG 6 cut(s) 155, 348, 1303, 1304, 1611, 1895
Mva1269I GAATGC 5 cut(s) 294, 553, 571, 706, 1832
MvaI CCWGG 2 cut(s) 348, 1895
MwoI GCNNNNNNNGC 4 cut(s) 752, 950, 1213, 1838
NciI CCSGG 4 cut(s) 155, 1303, 1304, 1611
NdeI CATATG 1 cut(s) 261
NdeII GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
NlaIV GGNNCC 2 cut(s) 99, 171
NmuCI GTSAC 1 cut(s) 400
NsiI ATGCAT 1 cut(s) 1012
NspI RCATGY 1 cut(s) 1393
PaeR7I CTCGAG 1 cut(s) 71
PagI TCATGA 2 cut(s) 216, 789
PaqCI CACCTGC 1 cut(s) 1742
PasI CCCWGGG 1 cut(s) 1894
PceI AGGCCT 1 cut(s) 1806
PctI GAATGC 5 cut(s) 294, 553, 571, 706, 1832
PdmI GAANNNNTTC 2 cut(s) 252, 1215
PfeI GAWTC 3 cut(s) 458, 1032, 1327
Pfl23II CGTACG 1 cut(s) 976
PleI GAGTC 1 cut(s) 823
PpsI GAGTC 1 cut(s) 823
Ppu21I YACGTR 2 cut(s) 1258, 1988
PsiI TTATAA 1 cut(s) 1817
Psp6I CCWGG 2 cut(s) 346, 1893
PspEI GGTNACC 1 cut(s) 1991
PspGI CCWGG 2 cut(s) 346, 1893
PspLI CGTACG 1 cut(s) 976
PspN4I GGNNCC 2 cut(s) 99, 171
PspPI GGNCC 2 cut(s) 169, 1891
PstI CTGCAG 1 cut(s) 64
PstNI CAGNNNCTG 3 cut(s) 412, 803, 825
PsuI RGATCY 2 cut(s) 67, 97
PvuII CAGCTG 2 cut(s) 800, 1157
RsaI GTAC 2 cut(s) 978, 1709
RsaNI GTAC 2 cut(s) 977, 1708
RseI CAYNNNNRTG 2 cut(s) 92, 1703
SalI GTCGAC 1 cut(s) 1564
SaqAI TTAA 1 cut(s) 1761
Sau3AI GATC 9 cut(s) 67, 97, 219, 415, 699, 895, 1445, 1756, 1849
Sau96I GGNCC 2 cut(s) 169, 1891
SchI GAGTC 1 cut(s) 824
ScrFI CCNGG 6 cut(s) 155, 348, 1303, 1304, 1611, 1895
SduI GDGCHC 2 cut(s) 1747, 1901
SfaNI GCATC 5 cut(s) 499, 921, 961, 997, 1285
SfcI CTRYAG 2 cut(s) 60, 78
Sfr274I CTCGAG 1 cut(s) 71
SlaI CTCGAG 1 cut(s) 71
SmaI CCCGGG 1 cut(s) 1304
SmiMI CAYNNNNRTG 2 cut(s) 92, 1703
SmlI CTYRAG 3 cut(s) 71, 1423, 1531
SmoI CTYRAG 3 cut(s) 71, 1423, 1531
Sse9I AATT 9 cut(s) 104, 162, 311, 831, 891, 1085, 1234, 1293, 1963
SseBI AGGCCT 1 cut(s) 1806
SsiI CCGC 8 cut(s) 374, 464, 551, 569, 599, 749, 1875, 1937
SspI AATATT 1 cut(s) 1680
SspMI CTAG 5 cut(s) 6, 1281, 1808, 1838, 2019
StuI AGGCCT 1 cut(s) 1806
StyD4I CCNGG 6 cut(s) 153, 346, 1301, 1302, 1609, 1893
StyI CCWWGG 1 cut(s) 1280
TaiI ACGT 3 cut(s) 1260, 1884, 1990
TaqI TCGA 5 cut(s) 11, 72, 684, 1399, 1565
TaqII GACCGA 1 cut(s) 181
TasI AATT 9 cut(s) 104, 162, 311, 831, 891, 1085, 1234, 1293, 1963
TatI WGTACW 1 cut(s) 1707
TauI GCSGC 2 cut(s) 377, 1878
TfiI GAWTC 3 cut(s) 458, 1032, 1327
Tru1I TTAA 1 cut(s) 1761
Tru9I TTAA 1 cut(s) 1761
TscAI CASTG 5 cut(s) 130, 366, 826, 1575, 1609
TseFI GTSAC 1 cut(s) 400
Tsp45I GTSAC 1 cut(s) 400
TspDTI ATGAA 9 cut(s) 39, 54, 458, 591, 1136, 1559, 1897, 1918, 1969
TspGWI ACGGA 2 cut(s) 1077, 1816
TspMI CCCGGG 1 cut(s) 1302
TspRI CASTG 5 cut(s) 130, 366, 826, 1575, 1609
XapI RAATTY 2 cut(s) 1085, 1293
XceI RCATGY 1 cut(s) 1393
XcmI CCANNNNNNNNNTGG 1 cut(s) 804
XhoI CTCGAG 1 cut(s) 71
XmaI CCCGGG 1 cut(s) 1302
XmaJI CCTAGG 1 cut(s) 1280
XmiI GTMKAC 3 cut(s) 135, 266, 1565
XmnI GAANNNNTTC 2 cut(s) 252, 1215
XspI CTAG 5 cut(s) 6, 1281, 1808, 1838, 2019
Zsp2I ATGCAT 1 cut(s) 1012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.