AT4G03480

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000494
Physical Location & Seq
Reverse (-)
1545470 .. 1548871
3402 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03480.1

Sequence Viewer

Length: 1980 bp
ATGGTTCGTTCACATCTTCTCCGTGCCACGCCAGAAGCTTCTCCGCTTAAACCGGCATCGTCTCCGTCAAACTGCAGGTTGTCACTTTCTCCCGTTGAACTTAGATTATATTTTATTAGGGACGACGACTTCAAAGTCAAAGTCGACATTTTCAAAACGTCATATCAAAACTCCCTGTTTGAATTGCCGTGTTGTGACAAGTCAGGTGACCATCACACTCACAGTGATCTCCAAACAAAGGCACGTCTAGATACAATCCAGGTACATAGGTCAACGGTTGTGTGTCTTGACACCGAATCTGTTCCAGAGTTCCTTACCAGTCTCAGATTTTCGGATCTTTTCAACCTCCCTGGTGAATATGTGCCGATGAATCCTGAGATCTTTAGCGCAATGAGAGCGGGGAACATAGAGCTTCTGGAAAAGTTGAAAAGCTACGAAACGCCAATGGCATGTCTTAAGAGCGATGGCGGAGATTCTGTTCTTCACCTTGCTGCTGCTTCGGGTCATCTTGAACTAGTGAAGAACATAATCACTGAATGTCCTTGTCTTTTATTGGAGCCAAACTCGAAGTATCAGATTCCGCTTCATGTGGCCGCTCGTGCTGGCCGTTCAGCAGTTGTGAAGGCTCTTGTTGCTTCTGTATTATATTTTTCACCTAGAGTGCCTGAAGAAGATAGGGATAGACTGAATATATATGTTCTGAAGGACATAGATGGAGATACTCCTCTGCATGCGGCCTTGAAAGACCTCCATGAAAAAGCAGAGGTAAGCCATCTTTTGAGATATCAGGAGCGCATCAGAAAACTATCCTTGTCTCACCTTATTATGCATTGGCGACGTAGCAGATGCATTTCATTTTCTGATGCATCAACACGCCAAATGGAGACAGCTGCCTGTCTAGTGAATGCAGACCAACATGCCTCATTTCTTGCGAATAAAGATGGAACATCTCCCTTGTATTTGGCAGTTGAAGCTGGTAATGTATCACTTGTGAGAGCGATGTTGAACCGTCCTGGTAATAAAATCCAAGGAAAAACCTCTACCTTAGCTTCACAATTGGAAGGGAGAAAATCGCTTTTACACGCAGCCCTCAAGGCCAAAAATACAGATGTTCTTAATGTTATTCTTAATGATGACCCGAGCCTTGTCAACGAGCGAGATGAAGAAGGGCGAACTTGTCTTTCTGTTGGAGCATCCATGGGGTATTACAAAGGAATATGTAAGCTATTAGATCGATCAACAAAGAGTGTTTATGAATGCGACAAAGATGGTTCCTTTCCAATTCATATGGCTGTAGAGAAAGGTCATTTGAAAGTTGTGAAAGAGATTCTAAAACGTTGTCCAGATTCGAAAGAGCTGGTTAACAAACAAGGTCAAAACATGCTTCACATTGCAGCAAAGAGTGCGAAAGTGGGATCTTTTCTTTTGGGTTATATAAGGAGACTTGATACGGAGAATCATCTGATCGAGGAGCAAGATGTGGATGGGAATGCACCTTTGCACCTAGCCACCATAAATTGGCGCTGTCGAACTGTTGATAAACTTGCTGCCTTTGCTTCTACCGAAACAAAAATCCTGAATATACAGAACAAAGATGGATTGAGACCTCTGGATATTGCAGAGTTAAATCTACAGCCTGACTACGTTTTACGGGAGAGATTGACGTTGATGGTACTGCTGTGCGTTTACGCACCGAAAAGTGTTGGTTGGCTACCGACGAGTGGAATGACACTAAGAAGCAGATCAGAGCCTCTAGACGCTAAAAAATACAAAGACCATATCAACGCTCTTCTGCTGGTGGCAACTCTTGTAGCCACTGTTACATTTGCTGCAGGTTTTACAATACCTGGTGGCTTTAACAGCTCTGCTCCAAACATGGGTATGGCCACTTTGGCCGATGACTCCACCCTCTTCTTTTTTCTGGTATTAGACACCTTGGCGATGCAAAGCTCTATTGTAGCAATAGTTGCTCTGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0002831 GO:0002833 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009966 GO:0009987 GO:0010033 GO:0010646 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016567 GO:0019538 GO:0023051 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0032446 GO:0032870 GO:0035690 GO:0036211 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0098827 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901700 GO:1901701 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

659

Amino Acids

72.99

Weight (kDa)

7.86

Isoelectric Point (pI)

43.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 130 - 211 2.6e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 408 - 476 4.5e-07 Ankyrin repeats (3 copies)
PGG PF13962 588 - 659 2.6e-20 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000494)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03670 AT4G03440 AT4G03440 AT4G03440 AT4G03450 AT4G03450 AT4G03460 AT4G03460 AT4G03470 AT4G03480 AT4G03480 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03490 AT4G03500 AT4G03500 AT4G03500 AT4G03505 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G05040 AT4G14390 AT4G14390 AT4G14390 AT4G14390 AT4G14400 AT4G14400 AT4G14400
fragaria_vesca FvH4_3g05910 FvH4_3g23320
malus_domestica MD03G1094000.v1.1 MD03G1094200.v1.1 MD03G1094600.v1.1 MD12G1218700.v1.1
prunus_persica Prupe.3G135100_v2.0.a1 Prupe.3G135200_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G135700_v2.0.a1 Prupe.3G142400_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G153800_v2.0.a1 Prupe.3G154000_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154200_v2.0.a1 Prupe.3G154600_v2.0.a1 Prupe.3G154700_v2.0.a1 Prupe.3G155200_v2.0.a1 Prupe.3G155300_v2.0.a1 Prupe.8G110300_v2.0.a1
pyrus_communis pycom03g07280 pycom03g07580 pycom03g07660 pycom03g07700 pycom03g07710
rosa_chinensis RchiOBHm_Chr3g0461161 RchiOBHm_Chr5g0041111
rosa_laevigata RLG00000023472 RLG00000023475 RLG00000034025
rosa_multiflora Rmu_co8126040.1_g000001 Rmu_co8268563.1_g000001 Rmu_sc0000964.1_g000014 Rmu_sc0028923.1_g000001 Rmu_sc0042194.1_g000001
rosa_roxburghii Rroxscaffold_1G00039610 Rroxscaffold_6G00401360
rosa_rugosa Rorug03G0048600 Rorug03G0048700 Rorug05G0190000
rosa_samantha Rh3AG105900 Rh3BG110200 Rh3BG268400 Rh3CG111800 Rh3DG111900 Rh5AG275800 Rh5BG280500 Rh5CG312600 Rh5DG288800
rosa_wichuraiana Rw3G009080 Rw5G025920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 134
Acc36I ACCTGC 2 cut(s) 66, 1823
AccB7I CCANNNNNTGG 1 cut(s) 1518
AccBSI CCGCTC 2 cut(s) 398, 596
AccI GTMKAC 1 cut(s) 144
AciI CCGC 6 cut(s) 44, 398, 468, 581, 594, 734
AclI AACGTT 1 cut(s) 1336
AclWI GGATC 2 cut(s) 342, 1423
AcoI YGGCCR 4 cut(s) 591, 604, 1884, 1893
AcuI CTGAAG 2 cut(s) 687, 722
AfaI GTAC 2 cut(s) 264, 1674
AfiI CCNNNNNNNGG 4 cut(s) 238, 1518, 1721, 1877
AflII CTTAAG 1 cut(s) 455
AhlI ACTAGT 1 cut(s) 514
AjiI CACGTC 1 cut(s) 245
AjnI CCWGG 4 cut(s) 258, 349, 1012, 1846
AloI GAACNNNNNNTCC 2 cut(s) 462, 494
Alw26I GTCTC 6 cut(s) 66, 326, 819, 878, 1435, 1597
AlwI GGATC 2 cut(s) 342, 1423
Ama87I CYCGRG 1 cut(s) 1138
AoxI GGCC 6 cut(s) 591, 604, 735, 1095, 1884, 1893
ApeKI GCWGC 7 cut(s) 491, 494, 890, 1085, 1394, 1547, 1829
ArsI GACNNNNNNTTYG 2 cut(s) 126, 158
Asp700I GAANNNNTTC 1 cut(s) 300
AspLEI GCGC 3 cut(s) 389, 795, 1524
AsuHPI GGTGA 5 cut(s) 218, 365, 476, 645, 809
AsuII TTCGAA 1 cut(s) 1349
AvaI CYCGRG 1 cut(s) 1138
BaeI ACNNNNGTAYC 4 cut(s) 254, 287, 1664, 1697
BalI TGGCCA 1 cut(s) 1886
BauI CACGAG 1 cut(s) 597
BbvI GCAGC 7 cut(s) 478, 481, 877, 1097, 1406, 1534, 1816
BccI CCATC 9 cut(s) 219, 458, 707, 780, 935, 1262, 1478, 1589, 1663
BceAI ACGGC 2 cut(s) 172, 591
BciT130I CCWGG 4 cut(s) 260, 351, 1014, 1848
BcoDI GTCTC 6 cut(s) 66, 326, 819, 878, 1435, 1597
BcuI ACTAGT 1 cut(s) 514
BfaI CTAG 6 cut(s) 248, 515, 657, 899, 1505, 1754
BfmI CTRYAG 4 cut(s) 73, 1293, 1631, 1830
BfoI RGCGCY 1 cut(s) 1525
BfrI CTTAAG 1 cut(s) 455
BfuAI ACCTGC 2 cut(s) 66, 1823
BglI GCCNNNNNGGC 2 cut(s) 1094, 1892
BglII AGATCT 1 cut(s) 378
BisI GCNGC 9 cut(s) 492, 495, 594, 735, 891, 1086, 1395, 1548, 1830
BlsI GCNGC 9 cut(s) 493, 496, 595, 736, 892, 1087, 1396, 1549, 1831
Bme1390I CCNGG 4 cut(s) 260, 351, 1014, 1848
BmeT110I CYCGRG 1 cut(s) 1138
BmgBI CACGTC 1 cut(s) 245
BmiI GGNNCC 2 cut(s) 558, 1273
BmrFI CCNGG 4 cut(s) 260, 351, 1014, 1848
BmsI GCATC 7 cut(s) 65, 804, 836, 853, 875, 1202, 1932
BplI GAGNNNNNCTC 2 cut(s) 548, 580
Bpu10I CCTNAGC 1 cut(s) 1045
Bpu14I TTCGAA 1 cut(s) 1349
BpuEI CTTGAG 1 cut(s) 1076
Bsa29I ATCGAT 1 cut(s) 1234
BsaI GGTCTC 1 cut(s) 1597
BsaJI CCNNGG 4 cut(s) 349, 1027, 1197, 1935
BsaXI ACNNNNNCTCC 3 cut(s) 33, 462, 492
Bsc4I CCNNNNNNNGG 4 cut(s) 238, 1518, 1721, 1877
Bse118I RCCGGY 1 cut(s) 52
Bse1I ACTGG 1 cut(s) 318
Bse3DI GCAATG 2 cut(s) 396, 1389
BseBI CCWGG 4 cut(s) 260, 351, 1014, 1848
BseCI ATCGAT 1 cut(s) 1234
BseDI CCNNGG 4 cut(s) 349, 1027, 1197, 1935
BseGI GGATG 2 cut(s) 1193, 1489
BseLI CCNNNNNNNGG 4 cut(s) 238, 1518, 1721, 1877
BseMI GCAATG 2 cut(s) 396, 1389
BseMII CTCAG 2 cut(s) 337, 366
BseNI ACTGG 1 cut(s) 318
BseRI GAGGAG 2 cut(s) 714, 1484
BseXI GCAGC 7 cut(s) 478, 481, 877, 1097, 1406, 1534, 1816
BshFI GGCC 6 cut(s) 593, 606, 737, 1097, 1886, 1895
BshVI ATCGAT 1 cut(s) 1234
BsiHKCI CYCGRG 1 cut(s) 1138
BsiSI CCGG 1 cut(s) 53
BslFI GGGAC 1 cut(s) 134
BslI CCNNNNNNNGG 4 cut(s) 238, 1518, 1721, 1877
BsmAI GTCTC 6 cut(s) 66, 326, 819, 878, 1435, 1597
BsmBI CGTCTC 1 cut(s) 66
BsmFI GGGAC 1 cut(s) 134
BsmI GAATGC 3 cut(s) 910, 1262, 1495
BsnI GGCC 6 cut(s) 593, 606, 737, 1097, 1886, 1895
Bso31I GGTCTC 1 cut(s) 1597
BsoBI CYCGRG 1 cut(s) 1138
Bsp119I TTCGAA 1 cut(s) 1349
Bsp143I GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
Bsp19I CCATGG 1 cut(s) 1197
BspACI CCGC 6 cut(s) 44, 398, 468, 581, 594, 734
BspANI GGCC 6 cut(s) 593, 606, 737, 1097, 1886, 1895
BspCNI CTCAG 2 cut(s) 336, 367
BspDI ATCGAT 1 cut(s) 1234
BspLI GGNNCC 2 cut(s) 558, 1273
BspMAI CTGCAG 2 cut(s) 77, 1834
BspMI ACCTGC 2 cut(s) 66, 1823
BspPI GGATC 2 cut(s) 342, 1423
BspQI GCTCTTC 1 cut(s) 1794
BspT104I TTCGAA 1 cut(s) 1349
BspTI CTTAAG 1 cut(s) 455
BspTNI GGTCTC 1 cut(s) 1597
BsrBI CCGCTC 2 cut(s) 398, 596
BsrDI GCAATG 2 cut(s) 396, 1389
BsrFI RCCGGY 1 cut(s) 52
BsrI ACTGG 1 cut(s) 318
BssAI RCCGGY 1 cut(s) 52
BssECI CCNNGG 4 cut(s) 349, 1027, 1197, 1935
BssMI GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
BssSI CACGAG 1 cut(s) 597
BssT1I CCWWGG 3 cut(s) 1027, 1197, 1935
Bst2BI CACGAG 1 cut(s) 597
Bst2UI CCWGG 4 cut(s) 260, 351, 1014, 1848
Bst4CI ACNGT 5 cut(s) 224, 277, 1010, 1534, 1819
Bst6I CTCTTC 2 cut(s) 1794, 1916
BstAFI CTTAAG 1 cut(s) 455
BstAPI GCANNNNNTGC 2 cut(s) 1403, 1967
BstBI TTCGAA 1 cut(s) 1349
BstC8I GCNNGC 2 cut(s) 604, 732
BstDEI CTNAG 5 cut(s) 101, 323, 375, 1045, 1733
BstDSI CCRYGG 1 cut(s) 1197
BstEII GGTNACC 1 cut(s) 206
BstF5I GGATG 2 cut(s) 1193, 1489
BstH2I RGCGCY 1 cut(s) 1525
BstHHI GCGC 3 cut(s) 389, 795, 1524
BstKTI GATC 8 cut(s) 229, 337, 381, 1234, 1238, 1418, 1467, 1745
BstMAI GTCTC 6 cut(s) 66, 326, 819, 878, 1435, 1597
BstMBI GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
BstNI CCWGG 4 cut(s) 260, 351, 1014, 1848
BstNSI RCATGY 4 cut(s) 453, 734, 920, 1384
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 4 cut(s) 258, 349, 1012, 1846
BstSFI CTRYAG 4 cut(s) 73, 1293, 1631, 1830
BstV1I GCAGC 7 cut(s) 478, 481, 877, 1097, 1406, 1534, 1816
BstX2I RGATCY 3 cut(s) 334, 378, 1415
BstYI RGATCY 3 cut(s) 334, 378, 1415
Bsu15I ATCGAT 1 cut(s) 1234
BsuRI GGCC 6 cut(s) 593, 606, 737, 1097, 1886, 1895
BsuTUI ATCGAT 1 cut(s) 1234
BtgI CCRYGG 1 cut(s) 1197
BtgZI GCGATG 3 cut(s) 477, 1013, 1955
BtrI CACGTC 1 cut(s) 245
BtsCI GGATG 2 cut(s) 1193, 1489
BtsIMutI CAGTG 3 cut(s) 229, 531, 1815
BveI ACCTGC 2 cut(s) 66, 1823
Cac8I GCNNGC 2 cut(s) 604, 732
CfoI GCGC 3 cut(s) 389, 795, 1524
Cfr10I RCCGGY 1 cut(s) 52
ClaI ATCGAT 1 cut(s) 1234
CseI GACGC 1 cut(s) 1766
CsiI ACCWGGT 1 cut(s) 1846
Csp6I GTAC 2 cut(s) 263, 1673
CviAII CATG 8 cut(s) 450, 587, 731, 752, 917, 1198, 1381, 1876
CviQI GTAC 2 cut(s) 263, 1673
DdeI CTNAG 5 cut(s) 101, 323, 375, 1045, 1733
DpnI GATC 8 cut(s) 228, 336, 380, 1233, 1237, 1417, 1466, 1744
DpnII GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
EaeI YGGCCR 4 cut(s) 591, 604, 1884, 1893
Eam1104I CTCTTC 2 cut(s) 1794, 1916
EarI CTCTTC 2 cut(s) 1794, 1916
EciI GGCGGA 1 cut(s) 483
Eco130I CCWWGG 3 cut(s) 1027, 1197, 1935
Eco31I GGTCTC 1 cut(s) 1597
Eco32I GATATC 1 cut(s) 785
Eco57I CTGAAG 2 cut(s) 687, 722
Eco88I CYCGRG 1 cut(s) 1138
Eco91I GGTNACC 1 cut(s) 206
EcoO65I GGTNACC 1 cut(s) 206
EcoRII CCWGG 4 cut(s) 258, 349, 1012, 1846
EcoRV GATATC 1 cut(s) 785
EcoT14I CCWWGG 3 cut(s) 1027, 1197, 1935
EcoT22I ATGCAT 3 cut(s) 831, 851, 868
ErhI CCWWGG 3 cut(s) 1027, 1197, 1935
Esp3I CGTCTC 1 cut(s) 66
FaeI CATG 8 cut(s) 453, 590, 734, 755, 920, 1201, 1384, 1879
FaqI GGGAC 1 cut(s) 134
FatI CATG 8 cut(s) 449, 586, 730, 751, 916, 1197, 1380, 1875
FauI CCCGC 1 cut(s) 391
FauNDI CATATG 1 cut(s) 1287
FblI GTMKAC 1 cut(s) 144
Fnu4HI GCNGC 9 cut(s) 492, 495, 594, 735, 891, 1086, 1395, 1548, 1830
FokI GGATG 2 cut(s) 1180, 1496
Fsp4HI GCNGC 9 cut(s) 492, 495, 594, 735, 891, 1086, 1395, 1548, 1830
FspBI CTAG 6 cut(s) 248, 515, 657, 899, 1505, 1754
GlaI GCGC 3 cut(s) 388, 794, 1523
GluI GCNGC 9 cut(s) 492, 495, 594, 735, 891, 1086, 1395, 1548, 1830
HaeII RGCGCY 1 cut(s) 1525
HaeIII GGCC 6 cut(s) 593, 606, 737, 1097, 1886, 1895
HapII CCGG 1 cut(s) 53
HgaI GACGC 1 cut(s) 1766
HhaI GCGC 3 cut(s) 389, 795, 1524
Hin1II CATG 8 cut(s) 453, 590, 734, 755, 920, 1201, 1384, 1879
Hin6I GCGC 3 cut(s) 387, 793, 1522
HinP1I GCGC 3 cut(s) 387, 793, 1522
HincII GTYRAC 4 cut(s) 145, 273, 1150, 1363
HindII GTYRAC 4 cut(s) 145, 273, 1150, 1363
HindIII AAGCTT 1 cut(s) 36
HinfI GANTC 8 cut(s) 296, 370, 473, 577, 1327, 1346, 1456, 1901
HpaI GTTAAC 1 cut(s) 1363
HpaII CCGG 1 cut(s) 53
HphI GGTGA 5 cut(s) 218, 365, 476, 645, 809
Hpy166II GTNNAC 6 cut(s) 11, 145, 273, 1150, 1363, 1687
Hpy188I TCNGA 9 cut(s) 326, 334, 576, 702, 800, 862, 1464, 1747, 1974
Hpy8I GTNNAC 6 cut(s) 11, 145, 273, 1150, 1363, 1687
Hpy99I CGWCG 3 cut(s) 128, 840, 1720
HpyAV CCTTC 4 cut(s) 616, 697, 1055, 1160
HpyCH4III ACNGT 5 cut(s) 224, 277, 1010, 1534, 1819
HpyCH4IV ACGT 6 cut(s) 158, 244, 838, 1336, 1644, 1664
HpyF3I CTNAG 5 cut(s) 101, 323, 375, 1045, 1733
HpySE526I ACGT 6 cut(s) 158, 244, 838, 1336, 1644, 1664
Hsp92II CATG 8 cut(s) 453, 590, 734, 755, 920, 1201, 1384, 1879
HspAI GCGC 3 cut(s) 387, 793, 1522
KspAI GTTAAC 1 cut(s) 1363
Kzo9I GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
LguI GCTCTTC 1 cut(s) 1794
LmnI GCTCC 5 cut(s) 556, 790, 1190, 1471, 1873
Lsp1109I GCAGC 7 cut(s) 478, 481, 877, 1097, 1406, 1534, 1816
LweI GCATC 7 cut(s) 65, 804, 836, 853, 875, 1202, 1932
MabI ACCWGGT 1 cut(s) 1846
MaeI CTAG 6 cut(s) 248, 515, 657, 899, 1505, 1754
MaeII ACGT 6 cut(s) 158, 244, 838, 1336, 1644, 1664
MaeIII GTNAC 4 cut(s) 81, 194, 206, 1819
MalI GATC 8 cut(s) 228, 336, 380, 1233, 1237, 1417, 1466, 1744
MbiI CCGCTC 2 cut(s) 398, 596
MboI GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
MboII GAAGA 8 cut(s) 8, 473, 532, 680, 683, 1175, 1781, 1903
MfeI CAATTG 1 cut(s) 1055
MflI RGATCY 3 cut(s) 334, 378, 1415
MlsI TGGCCA 1 cut(s) 1886
MluCI AATT 4 cut(s) 182, 1055, 1281, 1516
MluNI TGGCCA 1 cut(s) 1886
MlyI GAGTC 1 cut(s) 1895
MmeI TCCRAC 1 cut(s) 1168
Mox20I TGGCCA 1 cut(s) 1886
Mph1103I ATGCAT 3 cut(s) 831, 851, 868
MroXI GAANNNNTTC 1 cut(s) 300
MscI TGGCCA 1 cut(s) 1886
MseI TTAA 7 cut(s) 48, 456, 1116, 1128, 1362, 1625, 1857
MslI CAYNNNNRTG 1 cut(s) 1880
Msp20I TGGCCA 1 cut(s) 1886
MspA1I CMGCKG 1 cut(s) 890
MspCI CTTAAG 1 cut(s) 455
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 4 cut(s) 260, 351, 1014, 1848
MunI CAATTG 1 cut(s) 1055
Mva1269I GAATGC 3 cut(s) 910, 1262, 1495
MvaI CCWGG 4 cut(s) 260, 351, 1014, 1848
NcoI CCATGG 1 cut(s) 1197
NdeI CATATG 1 cut(s) 1287
NdeII GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
NlaIII CATG 8 cut(s) 453, 590, 734, 755, 920, 1201, 1384, 1879
NlaIV GGNNCC 2 cut(s) 558, 1273
NmuCI GTSAC 3 cut(s) 81, 194, 206
NsiI ATGCAT 3 cut(s) 831, 851, 868
NspI RCATGY 4 cut(s) 453, 734, 920, 1384
NspV TTCGAA 1 cut(s) 1349
PaeI GCATGC 1 cut(s) 734
PciSI GCTCTTC 1 cut(s) 1794
PcsI WCGNNNNNNNCGW 1 cut(s) 604
PctI GAATGC 3 cut(s) 910, 1262, 1495
PdmI GAANNNNTTC 1 cut(s) 300
PfeI GAWTC 7 cut(s) 296, 370, 473, 577, 1327, 1346, 1456
PflMI CCANNNNNTGG 1 cut(s) 1518
PkrI GCNGC 9 cut(s) 493, 496, 595, 736, 892, 1087, 1396, 1549, 1831
PleI GAGTC 1 cut(s) 1895
PpsI GAGTC 1 cut(s) 1895
Psp1406I AACGTT 1 cut(s) 1336
Psp6I CCWGG 4 cut(s) 258, 349, 1012, 1846
PspEI GGTNACC 1 cut(s) 206
PspGI CCWGG 4 cut(s) 258, 349, 1012, 1846
PspN4I GGNNCC 2 cut(s) 558, 1273
PstI CTGCAG 2 cut(s) 77, 1834
PsuI RGATCY 3 cut(s) 334, 378, 1415
PvuII CAGCTG 1 cut(s) 890
RsaI GTAC 2 cut(s) 264, 1674
RsaNI GTAC 2 cut(s) 263, 1673
RseI CAYNNNNRTG 1 cut(s) 1880
SalI GTCGAC 1 cut(s) 143
SapI GCTCTTC 1 cut(s) 1794
SaqAI TTAA 7 cut(s) 48, 456, 1116, 1128, 1362, 1625, 1857
SatI GCNGC 9 cut(s) 492, 495, 594, 735, 891, 1086, 1395, 1548, 1830
Sau3AI GATC 8 cut(s) 226, 334, 378, 1231, 1235, 1415, 1464, 1742
SchI GAGTC 1 cut(s) 1895
ScrFI CCNGG 4 cut(s) 260, 351, 1014, 1848
SexAI ACCWGGT 1 cut(s) 1846
SfaNI GCATC 7 cut(s) 65, 804, 836, 853, 875, 1202, 1932
SfcI CTRYAG 4 cut(s) 73, 1293, 1631, 1830
SfiI GGCCNNNNNGGCC 1 cut(s) 1892
SfuI TTCGAA 1 cut(s) 1349
SmiMI CAYNNNNRTG 1 cut(s) 1880
SmlI CTYRAG 2 cut(s) 455, 1091
SmoI CTYRAG 2 cut(s) 455, 1091
SpeI ACTAGT 1 cut(s) 514
SphI GCATGC 1 cut(s) 734
Sse9I AATT 4 cut(s) 182, 1055, 1281, 1516
SsiI CCGC 6 cut(s) 44, 398, 468, 581, 594, 734
SspMI CTAG 6 cut(s) 248, 515, 657, 899, 1505, 1754
StyD4I CCNGG 4 cut(s) 258, 349, 1012, 1846
StyI CCWWGG 3 cut(s) 1027, 1197, 1935
TaaI ACNGT 5 cut(s) 224, 277, 1010, 1534, 1819
TaiI ACGT 6 cut(s) 161, 247, 841, 1339, 1647, 1667
TaqI TCGA 6 cut(s) 144, 566, 1234, 1349, 1467, 1528
TasI AATT 4 cut(s) 182, 1055, 1281, 1516
TauI GCSGC 2 cut(s) 596, 737
TfiI GAWTC 7 cut(s) 296, 370, 473, 577, 1327, 1346, 1456
Tru1I TTAA 7 cut(s) 48, 456, 1116, 1128, 1362, 1625, 1857
Tru9I TTAA 7 cut(s) 48, 456, 1116, 1128, 1362, 1625, 1857
TscAI CASTG 3 cut(s) 229, 538, 1822
TseFI GTSAC 3 cut(s) 81, 194, 206
TseI GCWGC 7 cut(s) 491, 494, 890, 1085, 1394, 1547, 1829
Tsp45I GTSAC 3 cut(s) 81, 194, 206
TspDTI ATGAA 7 cut(s) 383, 575, 768, 843, 1176, 1269, 1274
TspGWI ACGGA 3 cut(s) 11, 54, 1466
TspRI CASTG 3 cut(s) 229, 538, 1822
Van91I CCANNNNNTGG 1 cut(s) 1518
Vha464I CTTAAG 1 cut(s) 455
XbaI TCTAGA 2 cut(s) 247, 1753
XceI RCATGY 4 cut(s) 453, 734, 920, 1384
XmiI GTMKAC 1 cut(s) 144
XmnI GAANNNNTTC 1 cut(s) 300
XspI CTAG 6 cut(s) 248, 515, 657, 899, 1505, 1754
Zsp2I ATGCAT 3 cut(s) 831, 851, 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.